AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0697720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697720 MtrunA17_Chr4g0050561 99.520 417 2 0 1 417 1 417 0.0 851
Msa0697720 MtrunA17_Chr8g0345461 53.602 347 150 4 61 403 72 411 3.03e-120 356
Msa0697720 MtrunA17_Chr1g0200081 52.841 352 154 5 61 403 72 420 1.35e-117 350
Msa0697720 MtrunA17_Chr7g0262801 48.556 381 185 4 30 407 65 437 8.84e-115 343
Msa0697720 MtrunA17_Chr1g0182711 52.000 325 155 1 83 407 115 438 4.74e-114 341
Msa0697720 MtrunA17_Chr3g0141901 48.603 358 169 2 58 401 24 380 7.73e-112 333
Msa0697720 MtrunA17_Chr3g0145011 47.253 364 184 2 45 401 21 383 3.34e-111 332
Msa0697720 MtrunA17_Chr1g0192151 52.740 292 137 1 113 404 124 414 3.44e-106 320
Msa0697720 MtrunA17_Chr4g0014731 52.740 292 137 1 113 404 125 415 4.18e-106 320
Msa0697720 MtrunA17_Chr3g0108321 49.632 272 136 1 70 341 73 343 6.93e-89 274
Msa0697720 MtrunA17_Chr7g0217421 39.928 278 154 5 127 402 17 283 7.70e-62 205
Msa0697720 MtrunA17_Chr6g0476861 41.797 256 146 2 161 414 202 456 2.27e-61 210
Msa0697720 MtrunA17_Chr1g0180791 44.915 236 126 2 158 393 207 438 2.46e-61 212
Msa0697720 MtrunA17_Chr1g0180791 35.905 337 202 7 52 384 379 705 4.99e-61 211
Msa0697720 MtrunA17_Chr7g0264521 34.043 376 221 8 52 410 380 745 2.69e-61 212
Msa0697720 MtrunA17_Chr7g0264521 44.068 236 128 2 158 393 208 439 4.67e-60 208
Msa0697720 MtrunA17_Chr4g0052411 42.276 246 140 2 157 402 230 473 5.37e-61 209
Msa0697720 MtrunA17_Chr7g0255651 41.870 246 142 1 139 384 265 509 7.38e-61 207
Msa0697720 MtrunA17_Chr7g0255651 28.279 244 160 6 149 383 4 241 2.33e-20 93.6
Msa0697720 MtrunA17_Chr3g0143721 40.304 263 153 3 149 409 240 500 2.37e-60 208
Msa0697720 MtrunA17_Chr2g0327121 40.873 252 147 2 133 384 458 707 3.98e-60 209
Msa0697720 MtrunA17_Chr2g0327121 42.798 243 135 2 151 393 202 440 6.08e-59 205
Msa0697720 MtrunA17_Chr2g0297281 41.463 246 142 2 157 402 287 530 1.65e-59 206
Msa0697720 MtrunA17_Chr7g0248361 35.913 323 182 5 114 414 132 451 1.28e-58 202
Msa0697720 MtrunA17_Chr3g0094871 41.473 258 147 3 161 416 16 271 3.07e-58 196
Msa0697720 MtrunA17_Chr7g0260601 40.684 263 141 3 161 415 245 500 7.45e-58 201
Msa0697720 MtrunA17_Chr8g0388371 40.637 251 141 2 158 401 406 655 9.99e-57 200
Msa0697720 MtrunA17_Chr7g0255691 42.276 246 141 1 139 384 269 513 2.62e-54 189
Msa0697720 MtrunA17_Chr7g0255691 35.242 227 132 5 159 377 20 239 8.91e-32 127
Msa0697720 MtrunA17_Chr5g0429571 40.385 260 148 3 151 404 308 566 3.16e-54 192
Msa0697720 MtrunA17_Chr4g0031821 39.453 256 152 2 161 414 325 579 1.47e-53 191
Msa0697720 MtrunA17_Chr3g0104211 40.157 254 145 3 157 404 305 557 5.30e-53 189
Msa0697720 MtrunA17_Chr8g0362771 41.224 245 140 2 158 402 239 479 8.01e-53 187
Msa0697720 MtrunA17_Chr7g0255721 39.163 263 156 2 152 412 681 941 3.78e-51 184
Msa0697720 MtrunA17_Chr7g0255721 33.036 224 143 3 161 383 391 608 8.14e-32 128
Msa0697720 MtrunA17_Chr7g0255641 38.403 263 158 2 152 412 654 914 4.10e-51 184
Msa0697720 MtrunA17_Chr7g0255641 35.981 214 120 5 195 397 432 639 3.19e-30 123
Msa0697720 MtrunA17_Chr2g0331161 38.866 247 145 3 150 394 409 651 1.61e-50 182
Msa0697720 MtrunA17_Chr4g0033451 39.921 253 140 5 157 401 381 629 1.98e-50 183
Msa0697720 MtrunA17_Chr1g0158881 38.976 254 149 2 157 410 330 577 1.28e-48 176
Msa0697720 MtrunA17_Chr6g0456351 37.918 269 146 5 158 417 319 575 3.37e-48 173
Msa0697720 MtrunA17_Chr3g0135721 38.866 247 146 2 156 402 224 465 4.21e-48 174
Msa0697720 MtrunA17_Chr3g0129971 42.489 233 128 3 157 384 297 528 6.38e-48 175
Msa0697720 MtrunA17_Chr4g0004121 36.054 294 154 7 150 416 236 522 1.04e-47 171
Msa0697720 MtrunA17_Chr3g0135761 39.669 242 141 2 161 402 227 463 5.52e-47 171
Msa0697720 MtrunA17_Chr7g0255901 37.903 248 148 5 148 392 631 875 6.65e-47 172
Msa0697720 MtrunA17_Chr4g0026631 40.650 246 133 8 139 380 110 346 5.92e-46 164
Msa0697720 MtrunA17_Chr2g0316851 39.224 232 131 4 158 383 596 823 1.32e-45 169
Msa0697720 MtrunA17_Chr5g0432631 38.000 250 146 3 155 402 228 470 1.84e-45 168
Msa0697720 MtrunA17_Chr4g0043381 40.175 229 133 1 156 384 837 1061 1.91e-45 168
Msa0697720 MtrunA17_Chr4g0043381 28.509 228 131 6 185 394 580 793 4.96e-11 65.1
Msa0697720 MtrunA17_Chr2g0277831 34.962 266 164 3 122 385 502 760 1.73e-44 165
Msa0697720 MtrunA17_Chr2g0277831 37.959 245 129 5 161 392 248 482 3.25e-39 149
Msa0697720 MtrunA17_Chr2g0321241 39.167 240 133 8 145 380 121 351 7.84e-44 158
Msa0697720 MtrunA17_Chr5g0397121 37.500 240 141 5 157 393 514 747 4.42e-43 161
Msa0697720 MtrunA17_Chr4g0052271 37.344 241 143 5 154 392 117 351 4.46e-43 155
Msa0697720 MtrunA17_Chr7g0246111 37.200 250 145 6 139 384 195 436 9.66e-43 157
Msa0697720 MtrunA17_Chr3g0127401 38.889 234 132 5 155 384 80 306 4.21e-42 152
Msa0697720 MtrunA17_Chr2g0327231 43.713 167 93 1 151 317 341 506 5.58e-42 154
Msa0697720 MtrunA17_Chr2g0327231 44.211 95 49 1 151 245 148 238 2.18e-20 93.2
Msa0697720 MtrunA17_Chr1g0204031 40.260 231 129 5 157 384 558 782 1.60e-41 156
Msa0697720 MtrunA17_Chr3g0086411 35.473 296 158 6 141 408 200 490 4.96e-41 152
Msa0697720 MtrunA17_Chr3g0086411 38.889 144 83 2 244 382 7 150 1.86e-20 93.6
Msa0697720 MtrunA17_Chr5g0432641 36.290 248 153 3 163 410 198 440 5.63e-41 154
Msa0697720 MtrunA17_Chr8g0387641 36.910 233 138 5 155 384 520 746 7.70e-41 154
Msa0697720 MtrunA17_Chr1g0195741 39.224 232 131 5 157 384 939 1164 8.77e-41 155
Msa0697720 MtrunA17_Chr3g0086401 35.017 297 158 5 141 407 370 661 9.27e-41 153
Msa0697720 MtrunA17_Chr3g0086401 38.222 225 121 7 159 373 96 312 8.68e-35 136
Msa0697720 MtrunA17_Chr1g0202371 38.095 231 133 5 157 384 398 621 2.18e-40 152
Msa0697720 MtrunA17_Chr4g0038101 38.261 230 134 4 158 384 723 947 8.46e-40 152
Msa0697720 MtrunA17_Chr3g0116131 38.938 226 128 5 157 378 903 1122 1.10e-39 151
Msa0697720 MtrunA17_Chr3g0127431 38.034 234 134 5 155 384 83 309 4.41e-39 144
Msa0697720 MtrunA17_Chr1g0195731 36.638 232 137 5 157 384 935 1160 7.65e-39 149
Msa0697720 MtrunA17_Chr6g0462581 37.931 232 132 7 157 384 501 724 1.69e-38 147
Msa0697720 MtrunA17_Chr3g0135781 44.785 163 83 3 158 319 57 213 2.21e-37 135
Msa0697720 MtrunA17_Chr1g0202381 37.288 236 129 6 157 384 469 693 3.92e-37 144
Msa0697720 MtrunA17_Chr4g0047411 35.424 271 142 7 161 402 180 446 6.88e-37 142
Msa0697720 MtrunA17_Chr6g0459561 31.597 288 166 9 150 416 376 653 2.41e-36 140
Msa0697720 MtrunA17_Chr6g0459541 32.500 280 154 8 133 384 20 292 1.80e-35 134
Msa0697720 MtrunA17_Chr1g0168321 39.267 191 114 1 226 414 196 386 2.62e-35 136
Msa0697720 MtrunA17_Chr8g0357301 31.276 243 148 4 179 412 492 724 9.22e-31 125
Msa0697720 MtrunA17_Chr2g0289231 31.897 232 136 7 157 377 298 518 6.25e-30 121
Msa0697720 MtrunA17_Chr6g0459551 30.597 268 142 8 150 384 96 352 3.27e-29 118
Msa0697720 MtrunA17_Chr1g0190401 34.711 242 145 8 141 373 659 896 2.59e-28 117
Msa0697720 MtrunA17_Chr4g0062081 62.338 77 28 1 161 236 12 88 1.99e-27 104
Msa0697720 MtrunA17_Chr5g0432391 34.940 166 100 2 234 397 81 240 1.32e-21 96.3
Msa0697720 MtrunA17_Chr6g0459531 28.333 240 132 9 150 384 61 265 5.12e-20 90.1
Msa0697720 MtrunA17_Chr8g0372701 33.520 179 99 7 156 326 222 388 9.79e-15 75.9
Msa0697720 MtrunA17_Chr6g0450161 35.099 151 89 5 194 343 364 506 1.10e-14 75.9
Msa0697720 MtrunA17_Chr3g0116941 30.000 170 101 4 196 351 199 364 1.30e-13 72.4
Msa0697720 MtrunA17_Chr5g0404651 33.125 160 95 5 171 326 229 380 2.90e-13 71.2
Msa0697720 MtrunA17_Chr5g0404291 35.417 144 84 5 194 336 389 524 2.92e-13 71.6
Msa0697720 MtrunA17_Chr2g0315971 28.814 177 110 6 163 332 477 644 3.77e-13 71.2
Msa0697720 MtrunA17_Chr2g0315971 28.022 182 115 5 157 332 196 367 1.78e-11 66.2
Msa0697720 MtrunA17_Chr4g0039781 33.113 151 92 5 194 343 370 512 6.67e-13 70.5
Msa0697720 MtrunA17_Chr2g0315911 29.609 179 105 7 163 332 210 376 1.08e-12 69.3
Msa0697720 MtrunA17_Chr2g0315921 32.468 154 90 5 183 332 236 379 3.81e-12 67.8
Msa0697720 MtrunA17_Chr6g0466811 29.016 193 113 7 163 341 215 397 2.36e-11 65.5
Msa0697720 MtrunA17_Chr2g0315991 30.000 160 96 6 179 332 220 369 2.76e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697720 AT5G19990.1 94.033 419 23 1 1 417 1 419 0.0 798
Msa0697720 AT5G19990.3 94.033 419 23 1 1 417 1 419 0.0 798
Msa0697720 AT5G20000.1 93.079 419 27 1 1 417 1 419 0.0 790
Msa0697720 AT5G19990.2 98.864 352 4 0 66 417 10 361 0.0 710
Msa0697720 AT1G53750.1 53.602 347 150 4 61 403 72 411 6.33e-120 355
Msa0697720 AT2G20140.1 47.090 378 195 2 30 407 63 435 2.45e-114 342
Msa0697720 AT4G29040.1 47.090 378 195 2 30 407 63 435 5.17e-114 341
Msa0697720 AT5G43010.1 49.441 358 166 2 58 401 24 380 7.90e-114 339
Msa0697720 AT1G53780.1 52.738 347 153 3 61 403 244 583 2.70e-113 344
Msa0697720 AT1G53780.4 52.738 347 153 3 61 403 244 583 2.70e-113 344
Msa0697720 AT1G53780.3 52.738 347 153 3 61 403 243 582 2.74e-113 344
Msa0697720 AT1G53780.2 52.738 347 153 3 61 403 265 604 6.46e-113 344
Msa0697720 AT1G45000.1 49.296 355 165 2 61 401 27 380 2.31e-112 335
Msa0697720 AT1G09100.1 52.740 292 137 1 113 404 124 414 2.80e-106 320
Msa0697720 AT3G05530.1 52.740 292 137 1 113 404 125 415 1.30e-105 319
Msa0697720 AT5G58290.1 44.444 378 196 3 31 407 39 403 7.42e-105 317
Msa0697720 AT1G45000.2 47.036 253 119 2 61 299 27 278 1.47e-71 228
Msa0697720 AT1G06430.1 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0697720 AT1G06430.3 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0697720 AT1G06430.2 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0697720 AT2G30950.1 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0697720 AT2G30950.2 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0697720 AT2G30950.3 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0697720 AT2G30950.4 42.276 246 140 2 157 402 229 472 7.29e-62 212
Msa0697720 AT3G09840.1 43.621 243 133 2 151 393 199 437 1.67e-61 213
Msa0697720 AT3G09840.1 42.128 235 136 0 150 384 471 705 1.40e-59 207
Msa0697720 AT5G03340.1 43.210 243 134 2 151 393 199 437 1.35e-60 210
Msa0697720 AT5G03340.1 42.128 235 135 1 150 384 471 704 1.44e-60 210
Msa0697720 AT3G53230.1 36.012 336 203 6 52 384 379 705 1.89e-60 210
Msa0697720 AT3G53230.1 41.870 246 139 2 151 396 200 441 3.29e-59 207
Msa0697720 AT5G42270.1 39.924 263 154 3 149 409 238 498 2.24e-60 208
Msa0697720 AT1G50250.1 39.544 263 155 3 149 409 250 510 2.26e-59 206
Msa0697720 AT5G15250.1 39.837 246 146 2 157 402 222 465 3.25e-57 199
Msa0697720 AT2G03670.1 41.463 246 144 0 139 384 266 511 1.53e-56 196
Msa0697720 AT2G03670.1 36.214 243 147 3 161 397 24 264 3.12e-44 162
Msa0697720 AT5G58870.1 40.541 259 151 2 157 413 327 584 2.38e-55 196
Msa0697720 AT4G23940.1 39.768 259 148 2 161 412 432 689 4.09e-55 196
Msa0697720 AT1G07510.1 40.467 257 150 2 161 415 329 584 4.55e-55 195
Msa0697720 AT5G15250.2 37.175 269 144 4 157 402 222 488 6.34e-55 190
Msa0697720 AT3G56690.1 41.870 246 141 1 139 384 704 947 6.56e-55 196
Msa0697720 AT3G56690.1 38.393 224 132 3 161 383 387 605 4.50e-42 159
Msa0697720 AT3G47060.1 39.382 259 154 2 157 413 323 580 2.72e-54 193
Msa0697720 AT2G29080.1 42.412 257 144 3 161 415 324 578 6.99e-52 186
Msa0697720 AT3G16290.1 38.800 250 147 3 150 397 401 646 3.37e-50 182
Msa0697720 AT1G05910.1 39.044 251 141 4 155 398 377 622 4.31e-50 182
Msa0697720 AT5G64580.1 40.329 243 137 4 157 393 314 554 8.34e-50 181
Msa0697720 AT2G26140.1 40.081 247 143 2 156 402 224 465 2.79e-49 178
Msa0697720 AT3G02450.1 40.079 252 144 3 152 401 327 573 5.05e-49 176
Msa0697720 AT5G53170.1 38.976 254 149 2 157 410 360 607 1.46e-48 177
Msa0697720 AT2G34560.1 37.594 266 153 6 154 411 98 358 2.40e-47 167
Msa0697720 AT2G34560.2 37.594 266 153 6 154 411 107 367 3.10e-47 166
Msa0697720 AT1G03000.1 39.749 239 137 6 152 387 651 885 4.22e-47 173
Msa0697720 AT1G80350.1 36.395 294 153 8 150 416 230 516 5.46e-47 169
Msa0697720 AT5G08470.3 41.176 238 129 4 158 393 834 1062 1.11e-45 169
Msa0697720 AT5G08470.1 41.176 238 129 4 158 393 843 1071 1.11e-45 169
Msa0697720 AT2G03670.2 36.585 246 142 4 161 397 24 264 2.08e-45 162
Msa0697720 AT2G03670.2 38.854 157 96 0 139 295 266 422 5.61e-29 117
Msa0697720 AT3G15120.1 39.224 232 129 4 158 382 718 944 2.24e-44 166
Msa0697720 AT3G15120.2 39.224 232 129 4 158 382 728 954 2.59e-44 166
Msa0697720 AT2G27600.1 39.837 246 135 8 139 380 112 348 3.65e-44 159
Msa0697720 AT2G45500.4 38.618 246 137 8 144 384 68 304 2.41e-43 155
Msa0697720 AT2G45500.3 38.618 246 137 8 144 384 68 304 2.41e-43 155
Msa0697720 AT3G01610.2 39.485 233 135 3 153 384 522 749 7.87e-43 160
Msa0697720 AT3G01610.2 35.223 247 144 3 148 383 222 463 6.53e-39 149
Msa0697720 AT3G01610.1 39.485 233 135 3 153 384 522 749 8.00e-43 160
Msa0697720 AT3G01610.1 35.223 247 144 3 148 383 222 463 7.10e-39 149
Msa0697720 AT2G45500.2 38.618 246 137 8 144 384 201 437 3.64e-42 155
Msa0697720 AT2G45500.1 38.189 254 143 8 136 384 197 441 4.47e-42 155
Msa0697720 AT2G45500.5 38.189 254 143 8 136 384 203 447 4.91e-42 155
Msa0697720 AT3G19740.1 39.827 231 129 5 158 384 703 927 1.51e-41 157
Msa0697720 AT4G02480.1 37.931 232 134 5 157 384 961 1186 4.89e-41 156
Msa0697720 AT1G50140.3 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0697720 AT1G50140.1 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0697720 AT1G50140.4 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0697720 AT1G50140.2 39.394 231 130 5 158 384 691 915 1.17e-40 154
Msa0697720 AT1G50140.5 39.394 231 130 5 158 384 691 915 1.17e-40 154
Msa0697720 AT4G28000.3 37.229 231 135 6 157 384 518 741 5.75e-40 152
Msa0697720 AT4G28000.2 37.229 231 135 6 157 384 518 741 7.45e-40 152
Msa0697720 AT4G28000.1 37.229 231 135 6 157 384 516 739 7.85e-40 152
Msa0697720 AT5G53540.1 35.206 267 150 7 155 405 83 342 8.46e-40 147
Msa0697720 AT4G24860.1 36.910 233 139 4 155 384 816 1043 1.21e-39 152
Msa0697720 AT4G24860.3 36.910 233 139 4 155 384 814 1041 1.29e-39 152
Msa0697720 AT4G24860.4 36.910 233 139 4 155 384 789 1016 1.76e-39 151
Msa0697720 AT4G24860.2 36.910 233 139 4 155 384 812 1039 1.78e-39 151
Msa0697720 AT1G02890.1 37.500 232 135 5 157 384 942 1167 2.10e-39 151
Msa0697720 AT1G64110.1 36.797 231 137 5 157 384 514 738 8.73e-39 149
Msa0697720 AT1G64110.5 36.797 231 137 5 157 384 517 741 8.95e-39 149
Msa0697720 AT1G64110.3 36.797 231 137 5 157 384 517 741 8.95e-39 149
Msa0697720 AT1G64110.2 36.797 231 137 5 157 384 519 743 9.25e-39 149
Msa0697720 AT1G64110.4 36.797 231 137 5 157 384 519 743 9.25e-39 149
Msa0697720 AT4G27680.1 36.752 234 137 5 155 384 80 306 1.41e-38 144
Msa0697720 AT4G04910.1 35.556 270 141 7 161 401 217 482 1.98e-37 144
Msa0697720 AT5G52882.1 36.364 231 137 6 157 384 515 738 2.79e-37 144
Msa0697720 AT3G27120.1 32.168 286 167 9 150 416 394 671 1.56e-36 142
Msa0697720 AT1G79560.2 34.234 222 131 3 181 393 514 729 5.09e-33 132
Msa0697720 AT1G79560.1 34.234 222 131 3 181 393 514 729 5.48e-33 132
Msa0697720 AT1G79560.3 34.234 222 131 3 181 393 514 729 6.22e-33 132
Msa0697720 AT1G62130.2 33.195 241 135 7 157 393 744 962 5.44e-30 123
Msa0697720 AT1G62130.1 33.195 241 135 7 157 393 751 969 6.33e-30 123
Msa0697720 AT4G04180.2 33.761 234 129 7 157 377 312 532 1.00e-29 121
Msa0697720 AT4G04180.1 33.761 234 129 7 157 377 317 537 1.05e-29 121
Msa0697720 AT3G04340.1 32.103 271 161 9 120 373 736 1000 1.21e-25 110
Msa0697720 AT5G08470.2 40.268 149 85 1 158 306 843 987 3.08e-25 108
Msa0697720 AT1G02890.2 31.466 232 121 6 157 384 942 1139 6.99e-24 105
Msa0697720 AT5G17760.1 32.022 178 106 6 156 326 216 385 1.90e-14 75.5
Msa0697720 AT4G24710.3 29.375 160 97 3 196 341 217 374 4.80e-14 74.3
Msa0697720 AT4G24710.1 29.375 160 97 3 196 341 205 362 4.83e-14 73.9
Msa0697720 AT2G18193.1 30.857 175 109 4 156 326 206 372 1.58e-13 72.8
Msa0697720 AT4G24710.4 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
Msa0697720 AT4G24710.2 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
Msa0697720 AT5G16930.1 32.450 151 93 5 194 343 399 541 1.15e-12 70.1
Msa0697720 AT2G18330.1 34.028 144 86 5 194 336 386 521 1.38e-12 70.1
Msa0697720 AT4G36580.1 33.333 144 87 5 194 336 383 518 2.92e-12 68.9
Msa0697720 AT3G03060.1 32.450 151 93 5 194 343 387 529 4.11e-12 68.6
Msa0697720 AT5G17740.1 29.282 181 110 6 156 326 208 380 9.96e-12 67.0
Msa0697720 AT3G50930.1 31.319 182 105 8 156 326 262 434 1.50e-11 66.6
Msa0697720 AT3G50940.1 30.178 169 105 5 163 326 216 376 2.05e-11 65.9

Find 119 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAAAATTAAGAGTTTA+AGG 0.155258 4_4:-67775260 Msa0697720:three_prime_UTR
AAAAGCTCAGGATGTTTAAT+TGG 0.236938 4_4:+67777952 None:intergenic
TCACAGGGTGTCTTGCTCTA+TGG 0.253894 4_4:-67777811 Msa0697720:intron
CAAACCTCTTCATTAGGATT+TGG 0.256280 4_4:+67776834 None:intergenic
GTTGGGAGGGTATTCGATTT+TGG 0.269548 4_4:+67780880 None:intergenic
CTCCCCTTGTTTGGTTGGTT+TGG 0.269659 4_4:+67780569 None:intergenic
ACTTGAGTCTATAAAATTAA+AGG 0.291828 4_4:-67775234 Msa0697720:three_prime_UTR
GGAAGAACTGCAGCTTCTTC+AGG 0.294426 4_4:-67779370 Msa0697720:CDS
TCAACAACATATTTCCCTTC+TGG 0.316681 4_4:+67778288 None:intergenic
GATAAATCCTTCTTCTTCTT+CGG 0.350600 4_4:+67780835 None:intergenic
TGCTCCATCAATTATCTTCA+TGG 0.351085 4_4:-67777252 Msa0697720:CDS
TTAAATTCATTCTTCTTGAA+TGG 0.356511 4_4:+67776678 None:intergenic
AGGAGCCTGGTTCATATGTT+GGG 0.363290 4_4:-67779350 Msa0697720:CDS
ACGGAGACCCTCCCCTTGTT+TGG 0.367288 4_4:+67780560 None:intergenic
AAGATGCAAACCTCTTCATT+AGG 0.374465 4_4:+67776828 None:intergenic
AAACTAAAGAGAGTAATAAA+AGG 0.377403 4_4:+67775315 None:intergenic
GAGAAGGTTCTAGAATGGTT+AGG 0.383338 4_4:-67777684 Msa0697720:CDS
ATTTAAAATTAAGAGTTTAA+GGG 0.384322 4_4:-67775259 Msa0697720:three_prime_UTR
CAGGAGCCTGGTTCATATGT+TGG 0.387317 4_4:-67779351 Msa0697720:CDS
TGTACATTCATCAGGGTGTC+TGG 0.388654 4_4:-67777733 Msa0697720:CDS
CACAGGGTGTCTTGCTCTAT+GGG 0.390742 4_4:-67777810 Msa0697720:intron
TCGTCCATGAAGATAATTGA+TGG 0.392466 4_4:+67777248 None:intergenic
ATACTGATTGTACATTCATC+AGG 0.399410 4_4:-67777741 Msa0697720:CDS
TTATCGTACTGAATTTATAA+AGG 0.399505 4_4:-67780817 Msa0697720:intron
TTTGGACAGTGAGGATGCTT+CGG 0.403502 4_4:-67779392 Msa0697720:intron
GGATCTGCTCGTATGGAATC+TGG 0.411007 4_4:-67777212 Msa0697720:CDS
AACGTAACGAGCTCAATTCT+AGG 0.412070 4_4:-67780458 Msa0697720:CDS
AGCATCTGGTGCTGAGCTTA+AGG 0.412390 4_4:-67776612 Msa0697720:intron
ACACACATTACCGCAGTTCA+TGG 0.419160 4_4:-67775477 Msa0697720:three_prime_UTR
ACCAATGGATCAACTTTGCT+TGG 0.422834 4_4:+67778177 None:intergenic
CACCAATCGGATTGATATCC+TGG 0.427746 4_4:-67776904 Msa0697720:CDS
TGTCAATCCGTCCAGGTCTC+AGG 0.427849 4_4:+67776871 None:intergenic
ATGGACGAAATTGACAGTAT+TGG 0.429793 4_4:-67777233 Msa0697720:CDS
TTGGACAGTGAGGATGCTTC+GGG 0.433244 4_4:-67779391 Msa0697720:intron
GTCTTGCTCTATGGGCCACC+TGG 0.438579 4_4:-67777802 Msa0697720:CDS
CTCTATGGGCCACCTGGTAC+AGG 0.438619 4_4:-67777796 Msa0697720:CDS
ATCATGTCATATGTAGAATC+AGG 0.441088 4_4:+67778129 None:intergenic
TTCTTCTTCTTCGGACGCGA+TGG 0.450630 4_4:+67780844 None:intergenic
TCCAAGCAAAGTTGATCCAT+TGG 0.453561 4_4:-67778178 Msa0697720:CDS
AGTTGATCGGATCTGATCTA+TGG 0.459323 4_4:-67780649 Msa0697720:exon
TAGGCTGTGTGCACTGAAGC+TGG 0.461439 4_4:-67775671 Msa0697720:CDS
TGAGACCTGGACGGATTGAC+AGG 0.462916 4_4:-67776869 Msa0697720:CDS
TTGGCAGAGCAATGCTCCTC+CGG 0.467372 4_4:+67780588 None:intergenic
AGAAGGTTCTAGAATGGTTA+GGG 0.470154 4_4:-67777683 Msa0697720:CDS
CAGTATTGGATCTGCTCGTA+TGG 0.473028 4_4:-67777219 Msa0697720:CDS
CTGCAGCTTCTTCAGGAGCC+TGG 0.474864 4_4:-67779363 Msa0697720:CDS
TTCGGACGCGATGGTGAAGT+TGG 0.476366 4_4:+67780853 None:intergenic
AGACCCTCCCCTTGTTTGGT+TGG 0.479760 4_4:+67780564 None:intergenic
GTCTCAGGAGTGCTTGATCC+AGG 0.483737 4_4:+67776886 None:intergenic
TGAAGCTTCCAATAAGATCA+AGG 0.484032 4_4:-67777123 Msa0697720:intron
AACATTGTTGGCTAGGGCAG+TGG 0.488091 4_4:-67777770 Msa0697720:CDS
AAGCTTCAAATCCATCCAAC+TGG 0.490388 4_4:+67777138 None:intergenic
TGAAGTGCAGCGTACTATGC+TGG 0.493786 4_4:-67777171 Msa0697720:CDS
ACCGCAGTTCATGGTCGCTC+TGG 0.496298 4_4:-67775468 Msa0697720:three_prime_UTR
GAGAAGATGAATGGAGCATC+TGG 0.497037 4_4:-67776626 Msa0697720:CDS
ATGGTGAAGTTGGTGATGTT+GGG 0.498666 4_4:+67780863 None:intergenic
GAACTTGTTCAGAAATACAT+TGG 0.500672 4_4:-67777706 Msa0697720:CDS
CGAAGAGCAACTCTAGTAGA+TGG 0.500788 4_4:+67778231 None:intergenic
GAACTTCTCAACCAGTTGGA+TGG 0.502365 4_4:-67777149 Msa0697720:CDS
ACGTAACGAGCTCAATTCTA+GGG 0.502522 4_4:-67780457 Msa0697720:CDS
GAAGCATGCCGAGGGTGCAC+CGG 0.505872 4_4:-67780607 Msa0697720:CDS
AAGATTGCTGAGAAGATGAA+TGG 0.505915 4_4:-67776635 Msa0697720:CDS
ATCTTCCTGTCAATCCGTCC+AGG 0.508744 4_4:+67776864 None:intergenic
ATGCTCCTCCGGTGCACCCT+CGG 0.511471 4_4:+67780599 None:intergenic
CATTGGAGAAGGTTCTAGAA+TGG 0.526027 4_4:-67777689 Msa0697720:CDS
ACATGTCATTGAGGAAGTTG+TGG 0.527779 4_4:-67775556 Msa0697720:CDS
GTTCAGAAATACATTGGAGA+AGG 0.530083 4_4:-67777700 Msa0697720:CDS
GATGGTGAAGTTGGTGATGT+TGG 0.530205 4_4:+67780862 None:intergenic
GATTCTACATATGACATGAT+TGG 0.538886 4_4:-67778126 Msa0697720:CDS
GTGAAGTTGGTGATGTTGGG+AGG 0.539661 4_4:+67780866 None:intergenic
CAGGATATCAATCCGATTGG+TGG 0.543342 4_4:+67776905 None:intergenic
TTTCTTCAGGTCCATCCAGA+AGG 0.548623 4_4:-67778303 Msa0697720:intron
AAGGTACAACTGAACAAGAA+AGG 0.548726 4_4:+67775400 None:intergenic
GCATGCCGAGGGTGCACCGG+AGG 0.551420 4_4:-67780604 Msa0697720:CDS
GCTCGTATGGAATCTGGAAG+TGG 0.557452 4_4:-67777206 Msa0697720:CDS
TGGGGAAGTCGTTAAAGTGA+TGG 0.558114 4_4:-67779331 Msa0697720:CDS
ATTTCCAAATCCTAATGAAG+AGG 0.559940 4_4:-67776838 Msa0697720:intron
TCTGCCAAACCAACCAAACA+AGG 0.562521 4_4:-67780573 Msa0697720:CDS
GAATGTTTGCTCTGAGAGAG+AGG 0.563359 4_4:-67775649 Msa0697720:CDS
CAACATATTTCCCTTCTGGA+TGG 0.563974 4_4:+67778292 None:intergenic
CGTGGCAAAGGTGATGAAGA+AGG 0.564116 4_4:-67775591 Msa0697720:CDS
ACAAATCAAAGAAATAAAAG+AGG 0.566379 4_4:-67778091 Msa0697720:intron
GGGGAAGTCGTTAAAGTGAT+GGG 0.566973 4_4:-67779330 Msa0697720:CDS
ATCCAGGATATCAATCCGAT+TGG 0.573250 4_4:+67776902 None:intergenic
GATCAAGCACTCCTGAGACC+TGG 0.576588 4_4:-67776882 Msa0697720:CDS
TTCTTCAGGTCCATCCAGAA+GGG 0.577294 4_4:-67778302 Msa0697720:intron
GATGGGCAAGAACAAAGTCT+TGG 0.577623 4_4:-67779313 Msa0697720:CDS
GGAGCCTGGTTCATATGTTG+GGG 0.579737 4_4:-67779349 Msa0697720:CDS
GAGGAGGGTACACGTGACAC+AGG 0.581105 4_4:-67775630 Msa0697720:CDS
TGAAGTTGGTGATGTTGGGA+GGG 0.586886 4_4:+67780867 None:intergenic
GCTGGAACTTCTCAACCAGT+TGG 0.589168 4_4:-67777153 Msa0697720:CDS
CGTTACGTTGCGCCTCGAGA+CGG 0.590961 4_4:+67780472 None:intergenic
ATGGAATCTGGAAGTGGCAA+TGG 0.600506 4_4:-67777200 Msa0697720:CDS
CTTCTTCATCACCTTTGCCA+CGG 0.600877 4_4:+67775592 None:intergenic
ATCGCGTCCGAAGAAGAAGA+AGG 0.601144 4_4:-67780842 Msa0697720:five_prime_UTR
GGTGAAGGAGCTGAAGCTCA+TGG 0.606891 4_4:+67780517 None:intergenic
TGTGCTGAGTATAGTATTGA+CGG 0.610288 4_4:+67780541 None:intergenic
TCTACATATGACATGATTGG+TGG 0.611571 4_4:-67778123 Msa0697720:CDS
ACTTTCATCAGATTAACCAA+TGG 0.612930 4_4:+67778162 None:intergenic
CAAACCAACCAAACAAGGGG+AGG 0.622103 4_4:-67780568 Msa0697720:CDS
GTTTGCTCTGAGAGAGAGGA+GGG 0.624635 4_4:-67775645 Msa0697720:CDS
ATCTGATCTATGGCTGCCGT+CGG 0.626800 4_4:-67780639 Msa0697720:exon
TACTGATTGTACATTCATCA+GGG 0.626895 4_4:-67777740 Msa0697720:CDS
CAAGAACAAAGTCTTGGTCA+AGG 0.631707 4_4:-67779307 Msa0697720:intron
CTGCCAAACCAACCAAACAA+GGG 0.631755 4_4:-67780572 Msa0697720:CDS
TGCCAAACCAACCAAACAAG+GGG 0.631947 4_4:-67780571 Msa0697720:CDS
AGAAGAATGAATTTAATGCG+TGG 0.632686 4_4:-67776671 Msa0697720:CDS
GTAGAAGTGAAGCATGCCGA+GGG 0.639336 4_4:-67780615 Msa0697720:CDS
TCTTGGAATAGCTCAACCGA+AGG 0.650779 4_4:-67777923 Msa0697720:intron
AGTAGAAGTGAAGCATGCCG+AGG 0.652737 4_4:-67780616 Msa0697720:CDS
ACTTCCCCAACATATGAACC+AGG 0.653226 4_4:+67779345 None:intergenic
AAGCACTCCTGAGACCTGGA+CGG 0.655986 4_4:-67776878 Msa0697720:CDS
AAACCAACCAAACAAGGGGA+GGG 0.659041 4_4:-67780567 Msa0697720:CDS
TGTTTGCTCTGAGAGAGAGG+AGG 0.667718 4_4:-67775646 Msa0697720:CDS
ATGCTTCACTTCTACTCCGA+CGG 0.669417 4_4:+67780623 None:intergenic
TCATAATCTTAACCGTCTCG+AGG 0.679147 4_4:-67780484 Msa0697720:CDS
GAGGGTACACGTGACACAGG+AGG 0.687991 4_4:-67775627 Msa0697720:CDS
CGTAACGAGCTCAATTCTAG+GGG 0.691922 4_4:-67780456 Msa0697720:intron
ACCAGAGCGACCATGAACTG+CGG 0.743104 4_4:+67775467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAAATTAAGAGTTTA+AGG - chr4_4:67780873-67780892 Msa0697720:five_prime_UTR 10.0%
!!! ATTTAAAATTAAGAGTTTAA+GGG - chr4_4:67780874-67780893 Msa0697720:five_prime_UTR 10.0%
!! AATTATAAATTAGGGTTATT+AGG - chr4_4:67775379-67775398 Msa0697720:intron 15.0%
!! AAACAATAAAAAATGATTAG+AGG - chr4_4:67775946-67775965 Msa0697720:intron 15.0%
!! AAATATAACTCAAATACATT+AGG + chr4_4:67776208-67776227 None:intergenic 15.0%
!!! ATGTATTTGAGTTATATTTT+TGG - chr4_4:67776209-67776228 Msa0697720:intron 15.0%
!! TTATCCAATAAATAATATCT+AGG - chr4_4:67776377-67776396 Msa0697720:intron 15.0%
!! AGAATTTAGATTAATCAATA+CGG + chr4_4:67777557-67777576 None:intergenic 15.0%
!!! TTTTTTTTTTAATGATGCTA+TGG - chr4_4:67779036-67779055 Msa0697720:intron 15.0%
!! GAATATTATATGAAAATGAA+AGG + chr4_4:67779694-67779713 None:intergenic 15.0%
!! AATAGTATGAAATATAAAAC+TGG - chr4_4:67779945-67779964 Msa0697720:intron 15.0%
!! ATAGTATGAAATATAAAACT+GGG - chr4_4:67779946-67779965 Msa0697720:intron 15.0%
!! TTATCGTACTGAATTTATAA+AGG - chr4_4:67775316-67775335 Msa0697720:three_prime_UTR 20.0%
!!! TAAGATTATGATTCTTTTGA+CGG + chr4_4:67775640-67775659 None:intergenic 20.0%
!! AAGAATAAAAAAGAGGAATA+GGG + chr4_4:67775717-67775736 None:intergenic 20.0%
!! TCAATTCAATAGATAATAAG+AGG - chr4_4:67775797-67775816 Msa0697720:intron 20.0%
!!! TTTTATTGTTTTAGACAACT+GGG + chr4_4:67775937-67775956 None:intergenic 20.0%
!!! TTTTTATTGTTTTAGACAAC+TGG + chr4_4:67775938-67775957 None:intergenic 20.0%
!! AAGATATGAATTTGAAAACT+GGG + chr4_4:67776425-67776444 None:intergenic 20.0%
!!! AATCCAGAAAAGTTATTTTT+GGG + chr4_4:67776701-67776720 None:intergenic 20.0%
!!! AAATCCAGAAAAGTTATTTT+TGG + chr4_4:67776702-67776721 None:intergenic 20.0%
!! TATAGCAGAATACTATTTAA+AGG - chr4_4:67777321-67777340 Msa0697720:intron 20.0%
!! TATTTAGATTAATCAATACG+AGG + chr4_4:67777415-67777434 None:intergenic 20.0%
!!! ATGTATAAAAGCATTTAAGA+AGG + chr4_4:67777471-67777490 None:intergenic 20.0%
!!! TAAATGCTTTTATACATAGT+TGG - chr4_4:67777474-67777493 Msa0697720:intron 20.0%
!! AGTATTTAGACTAATCAATA+CGG + chr4_4:67777521-67777540 None:intergenic 20.0%
!! GAATTTAGATTAATCAATAC+GGG + chr4_4:67777556-67777575 None:intergenic 20.0%
!! TTATTATTAATTTCATGCAC+AGG + chr4_4:67777770-67777789 None:intergenic 20.0%
!!! CTTTTATTTCTTTGATTTGT+TGG + chr4_4:67778042-67778061 None:intergenic 20.0%
!! ACAAATCAAAGAAATAAAAG+AGG - chr4_4:67778042-67778061 Msa0697720:intron 20.0%
!!! TCATTTACATCAAATTTTAC+AGG - chr4_4:67778147-67778166 Msa0697720:CDS 20.0%
!! AAAAATTACCTTGATCTTAT+TGG + chr4_4:67779021-67779040 None:intergenic 20.0%
!! TAAATATAAAACTGTAACAG+AGG - chr4_4:67779111-67779130 Msa0697720:intron 20.0%
!! AAATATAAAACTGTAACAGA+GGG - chr4_4:67779112-67779131 Msa0697720:intron 20.0%
!!! ATATAGTTGTTTTCAGTAAA+TGG + chr4_4:67779402-67779421 None:intergenic 20.0%
!! TTAAATTCATTCTTCTTGAA+TGG + chr4_4:67779458-67779477 None:intergenic 20.0%
!!! ATCATCTAAAATATTGTCAT+CGG - chr4_4:67779594-67779613 Msa0697720:intron 20.0%
!!! TGATTTGTATTTTATGTTTC+TGG - chr4_4:67780603-67780622 Msa0697720:CDS 20.0%
!! AAACTAAAGAGAGTAATAAA+AGG + chr4_4:67780755-67780774 None:intergenic 20.0%
!! AAACTAAAGAGAGTAATAAA+AGG + chr4_4:67780755-67780774 None:intergenic 20.0%
!! ACTTGAGTCTATAAAATTAA+AGG - chr4_4:67780899-67780918 Msa0697720:five_prime_UTR 20.0%
!!! ATTTTGGTAGAATTGAATTG+GGG + chr4_4:67775240-67775259 None:intergenic 25.0%
!!! GATTTTGGTAGAATTGAATT+GGG + chr4_4:67775241-67775260 None:intergenic 25.0%
! TTGGGGGTTAATTATAAATT+AGG - chr4_4:67775370-67775389 Msa0697720:intron 25.0%
! TGGGGGTTAATTATAAATTA+GGG - chr4_4:67775371-67775390 Msa0697720:intron 25.0%
! AAATTTCAAAGTCTGAATTC+AGG + chr4_4:67775440-67775459 None:intergenic 25.0%
!!! TATTTTACAGTAGAGTTGAT+CGG - chr4_4:67775471-67775490 Msa0697720:three_prime_UTR 25.0%
! CAAGAATAAAAAAGAGGAAT+AGG + chr4_4:67775718-67775737 None:intergenic 25.0%
! GCAATTCAAGAATAAAAAAG+AGG + chr4_4:67775724-67775743 None:intergenic 25.0%
! CAATAGATAATAAGAGGATA+TGG - chr4_4:67775803-67775822 Msa0697720:intron 25.0%
!! ATAAACGGATTCAAAATTTG+AGG + chr4_4:67775843-67775862 None:intergenic 25.0%
!!! AAACTTTGGTTTGTTTATGT+GGG - chr4_4:67776089-67776108 Msa0697720:intron 25.0%
! CACACCTAGATATTATTTAT+TGG + chr4_4:67776384-67776403 None:intergenic 25.0%
! GAAGATATGAATTTGAAAAC+TGG + chr4_4:67776426-67776445 None:intergenic 25.0%
!!! ATTTTCTTTTGCTGTAAGAT+CGG - chr4_4:67776485-67776504 Msa0697720:intron 25.0%
! AAATGATAGTAAATCAGTGA+AGG + chr4_4:67776594-67776613 None:intergenic 25.0%
!!! ATCCAGAAAAGTTATTTTTG+GGG + chr4_4:67776700-67776719 None:intergenic 25.0%
! ATATATAACAGTACAGATAG+CGG + chr4_4:67776921-67776940 None:intergenic 25.0%
!! CTCTTTTCATTATTCATTGT+TGG - chr4_4:67777192-67777211 Msa0697720:CDS 25.0%
! GAAGCATAGATCAATAAAAA+TGG + chr4_4:67777388-67777407 None:intergenic 25.0%
! TAAATACTCATGTACATAGT+TGG - chr4_4:67777429-67777448 Msa0697720:intron 25.0%
! TATTTAGACTAATCAATACG+GGG + chr4_4:67777519-67777538 None:intergenic 25.0%
! GTATTTAGACTAATCAATAC+GGG + chr4_4:67777520-67777539 None:intergenic 25.0%
! ACATAAATCTTCACTTCTTA+AGG + chr4_4:67777611-67777630 None:intergenic 25.0%
! TACAAGGATAAAAATTCCAT+AGG + chr4_4:67777661-67777680 None:intergenic 25.0%
! CACTATTAAAGTGATTTACA+AGG + chr4_4:67777677-67777696 None:intergenic 25.0%
! TAGCATCAACATAAATAAGA+GGG - chr4_4:67778531-67778550 Msa0697720:intron 25.0%
!!! TTGTGAGACATTGTTTTTTT+AGG + chr4_4:67778762-67778781 None:intergenic 25.0%
! AGTAGTGTTACATATCATAT+TGG + chr4_4:67778844-67778863 None:intergenic 25.0%
! GAAGAGAAAATTGCAATTAT+AGG - chr4_4:67779196-67779215 Msa0697720:intron 25.0%
!!! ATTGCAATTATAGGTTTTGA+TGG - chr4_4:67779205-67779224 Msa0697720:intron 25.0%
! CTCAATACAATCATATCAAA+GGG + chr4_4:67779344-67779363 None:intergenic 25.0%
! TCTCAATACAATCATATCAA+AGG + chr4_4:67779345-67779364 None:intergenic 25.0%
! TATATGTATATGTATGCTGA+AGG + chr4_4:67779379-67779398 None:intergenic 25.0%
!!! AATGGATTTTCAAGATATCT+CGG + chr4_4:67779440-67779459 None:intergenic 25.0%
! AAACAAAGTGATTGCATAAT+AGG + chr4_4:67779716-67779735 None:intergenic 25.0%
!! AATTTTACAATGCGAAACAA+AGG - chr4_4:67779759-67779778 Msa0697720:intron 25.0%
! CAACAATAACATGTTAATGT+TGG + chr4_4:67779797-67779816 None:intergenic 25.0%
! CAACAATAACATGTTAATGT+TGG + chr4_4:67779797-67779816 None:intergenic 25.0%
! TAATAGTTGATTGGATTGTT+GGG - chr4_4:67780042-67780061 Msa0697720:intron 25.0%
! CATAATTCTATCTGAATAGT+AGG + chr4_4:67780289-67780308 None:intergenic 25.0%
!! TTAACACATTATTTCAAGTG+TGG - chr4_4:67780403-67780422 Msa0697720:intron 25.0%
!!! TCTGTGCTTTTATTTTATGT+AGG - chr4_4:67780443-67780462 Msa0697720:intron 25.0%
!! CGATTTTGGTAGAATTGAAT+TGG + chr4_4:67775242-67775261 None:intergenic 30.0%
GATAAATCCTTCTTCTTCTT+CGG + chr4_4:67775301-67775320 None:intergenic 30.0%
!!! TCGCTCTTATTTTGGAATTT+GGG - chr4_4:67775352-67775371 Msa0697720:intron 30.0%
! TGAATCTGATTTGTAGAACT+AGG - chr4_4:67775411-67775430 Msa0697720:three_prime_UTR 30.0%
! GAATCTGATTTGTAGAACTA+GGG - chr4_4:67775412-67775431 Msa0697720:three_prime_UTR 30.0%
AAAATGATTAGAGGACATTG+TGG - chr4_4:67775955-67775974 Msa0697720:intron 30.0%
AATATGGAATTCAACAAGGT+TGG - chr4_4:67776002-67776021 Msa0697720:intron 30.0%
!! CAAACTTTGGTTTGTTTATG+TGG - chr4_4:67776088-67776107 Msa0697720:intron 30.0%
CTATATATACACACAAAACC+AGG - chr4_4:67776153-67776172 Msa0697720:intron 30.0%
AAACAAACAAAAGCTTATCC+TGG + chr4_4:67776174-67776193 None:intergenic 30.0%
ATATGAATTTGAAAACTGGG+AGG + chr4_4:67776422-67776441 None:intergenic 30.0%
TCTAGCACATCAAACTTATT+AGG - chr4_4:67776444-67776463 Msa0697720:intron 30.0%
!!! TCCAGAAAAGTTATTTTTGG+GGG + chr4_4:67776699-67776718 None:intergenic 30.0%
TCCAAATTGCAATTGAATCA+GGG + chr4_4:67776727-67776746 None:intergenic 30.0%
AAAAACAAATTGAGCCATCA+TGG + chr4_4:67776893-67776912 None:intergenic 30.0%
TTGTTAAATAGCAGCTATAG+TGG - chr4_4:67776968-67776987 Msa0697720:intron 30.0%
AGTGTATTATGCAACAATAG+TGG + chr4_4:67777030-67777049 None:intergenic 30.0%
! CCAAGATTCTGTACTATTTT+AGG + chr4_4:67777634-67777653 None:intergenic 30.0%
CCTAAAATAGTACAGAATCT+TGG - chr4_4:67777631-67777650 Msa0697720:intron 30.0%
AAATAGTACAGAATCTTGGT+TGG - chr4_4:67777635-67777654 Msa0697720:intron 30.0%
GAACTCATGACTATATCTAA+TGG - chr4_4:67777731-67777750 Msa0697720:CDS 30.0%
TTATTAATTTCATGCACAGG+TGG + chr4_4:67777767-67777786 None:intergenic 30.0%
GAACAAAAAATCCTAGACAA+AGG - chr4_4:67777790-67777809 Msa0697720:CDS 30.0%
!! AGTTTCCATTACTTTTCTTC+AGG - chr4_4:67777817-67777836 Msa0697720:intron 30.0%
ACTTTCATCAGATTAACCAA+TGG + chr4_4:67777974-67777993 None:intergenic 30.0%
ATCATGTCATATGTAGAATC+AGG + chr4_4:67778007-67778026 None:intergenic 30.0%
GATTCTACATATGACATGAT+TGG - chr4_4:67778007-67778026 Msa0697720:intron 30.0%
AAAAGCTCAGGATGTTTAAT+TGG + chr4_4:67778184-67778203 None:intergenic 30.0%
AACTCATGCAATATTACCTT+CGG + chr4_4:67778229-67778248 None:intergenic 30.0%
! TACTCTATTTTACGTATCAC+AGG - chr4_4:67778306-67778325 Msa0697720:intron 30.0%
! ACTCTATTTTACGTATCACA+GGG - chr4_4:67778307-67778326 Msa0697720:intron 30.0%
! ATACTGATTGTACATTCATC+AGG - chr4_4:67778392-67778411 Msa0697720:intron 30.0%
! TACTGATTGTACATTCATCA+GGG - chr4_4:67778393-67778412 Msa0697720:intron 30.0%
! GAACTTGTTCAGAAATACAT+TGG - chr4_4:67778427-67778446 Msa0697720:intron 30.0%
ATAATGAATGGAGTAGGTTT+AGG + chr4_4:67778508-67778527 None:intergenic 30.0%
TTGATGCTACACATAATGAA+TGG + chr4_4:67778520-67778539 None:intergenic 30.0%
GTAGCATCAACATAAATAAG+AGG - chr4_4:67778530-67778549 Msa0697720:intron 30.0%
! ACCTTTGAAAAGACAACAAT+GGG - chr4_4:67778728-67778747 Msa0697720:intron 30.0%
ACATTTACTTCAAATGAGCA+TGG + chr4_4:67778802-67778821 None:intergenic 30.0%
! TTTGAAGTAAATGTGTTCTG+AGG - chr4_4:67778808-67778827 Msa0697720:intron 30.0%
ATTAGAGGGAATTCCATAAT+TGG - chr4_4:67779065-67779084 Msa0697720:intron 30.0%
GTGAACGTATAACTCAAATT+AGG + chr4_4:67779159-67779178 None:intergenic 30.0%
GTTATACGTTCACAATTTAG+AGG - chr4_4:67779166-67779185 Msa0697720:intron 30.0%
ATTTCCAAATCCTAATGAAG+AGG - chr4_4:67779295-67779314 Msa0697720:intron 30.0%
AGAAGAATGAATTTAATGCG+TGG - chr4_4:67779462-67779481 Msa0697720:intron 30.0%
ATACCTTAATTGCTTCAACA+AGG + chr4_4:67779620-67779639 None:intergenic 30.0%
GCACTTATTGAGATAAACAA+CGG - chr4_4:67779665-67779684 Msa0697720:intron 30.0%
CACTTATTGAGATAAACAAC+GGG - chr4_4:67779666-67779685 Msa0697720:intron 30.0%
! TATGCAATCACTTTGTTTGA+TGG - chr4_4:67779718-67779737 Msa0697720:intron 30.0%
! ATGCAATCACTTTGTTTGAT+GGG - chr4_4:67779719-67779738 Msa0697720:intron 30.0%
! GTTGTCTAAGATATTATCTC+AGG - chr4_4:67779816-67779835 Msa0697720:intron 30.0%
! GTTGTCTAAGATATTATCTC+AGG - chr4_4:67779816-67779835 Msa0697720:intron 30.0%
CTAATAGTTGATTGGATTGT+TGG - chr4_4:67780041-67780060 Msa0697720:intron 30.0%
CAGTTATAAACACTTCATAG+TGG - chr4_4:67780126-67780145 Msa0697720:intron 30.0%
AATAGTAGGATTTGTGAAAG+GGG + chr4_4:67780275-67780294 None:intergenic 30.0%
GAATAGTAGGATTTGTGAAA+GGG + chr4_4:67780276-67780295 None:intergenic 30.0%
TGAATAGTAGGATTTGTGAA+AGG + chr4_4:67780277-67780296 None:intergenic 30.0%
CTATTCAGATAGAATTATGC+TGG - chr4_4:67780290-67780309 Msa0697720:intron 30.0%
ATTATGCTGGAATGTCATAA+TGG - chr4_4:67780303-67780322 Msa0697720:intron 30.0%
!!! CTCGCTCTTATTTTGGAATT+TGG - chr4_4:67775351-67775370 Msa0697720:intron 35.0%
!!! CGCTCTTATTTTGGAATTTG+GGG - chr4_4:67775353-67775372 Msa0697720:intron 35.0%
!!! GCTCTTATTTTGGAATTTGG+GGG - chr4_4:67775354-67775373 Msa0697720:intron 35.0%
! TGTGCTGAGTATAGTATTGA+CGG + chr4_4:67775595-67775614 None:intergenic 35.0%
! TATGATTCTTTTGACGGTGA+AGG + chr4_4:67775634-67775653 None:intergenic 35.0%
!! GTTGATTTGTATCACCCTTT+GGG - chr4_4:67775875-67775894 Msa0697720:intron 35.0%
!! TTGATTTGTATCACCCTTTG+GGG - chr4_4:67775876-67775895 Msa0697720:intron 35.0%
CGGTAATATGGAATTCAACA+AGG - chr4_4:67775998-67776017 Msa0697720:intron 35.0%
CTCAATTTCTCCAACAAGAT+TGG + chr4_4:67776042-67776061 None:intergenic 35.0%
!! TTGGTTTGTTTATGTGGGTT+TGG - chr4_4:67776094-67776113 Msa0697720:intron 35.0%
!! TGGTTTGTTTATGTGGGTTT+GGG - chr4_4:67776095-67776114 Msa0697720:intron 35.0%
GACAAATATTGTCCTTTGAG+CGG - chr4_4:67776247-67776266 Msa0697720:intron 35.0%
GCACATCAAACTTATTAGGA+AGG - chr4_4:67776448-67776467 Msa0697720:intron 35.0%
!!! CCAGAAAAGTTATTTTTGGG+GGG + chr4_4:67776698-67776717 None:intergenic 35.0%
TCCCTGATTCAATTGCAATT+TGG - chr4_4:67776723-67776742 Msa0697720:intron 35.0%
GTCCAAATTGCAATTGAATC+AGG + chr4_4:67776728-67776747 None:intergenic 35.0%
ACTATACCACTATAGTGTAG+CGG - chr4_4:67776992-67777011 Msa0697720:intron 35.0%
GAATTGTCTATGTCTCACAT+TGG - chr4_4:67777214-67777233 Msa0697720:CDS 35.0%
!! GAAAAGTTTTGACAAGACCA+CGG + chr4_4:67777294-67777313 None:intergenic 35.0%
TTATGTATCTTCGAGTCCAT+GGG - chr4_4:67777348-67777367 Msa0697720:intron 35.0%
TCATGACTATATCTAATGGC+TGG - chr4_4:67777735-67777754 Msa0697720:CDS 35.0%
ATGGACCTGAAGAAAAGTAA+TGG + chr4_4:67777825-67777844 None:intergenic 35.0%
TCAACAACATATTTCCCTTC+TGG + chr4_4:67777848-67777867 None:intergenic 35.0%
TCTACATATGACATGATTGG+TGG - chr4_4:67778010-67778029 Msa0697720:intron 35.0%
! AACAATGTTTTTCCTGTACC+AGG + chr4_4:67778352-67778371 None:intergenic 35.0%
TGGTACAGGAAAAACATTGT+TGG - chr4_4:67778351-67778370 Msa0697720:intron 35.0%
! AGGAAAAACATTGTTGGCTA+GGG - chr4_4:67778357-67778376 Msa0697720:intron 35.0%
GTTCAGAAATACATTGGAGA+AGG - chr4_4:67778433-67778452 Msa0697720:intron 35.0%
!! AGAAGGTTCTAGAATGGTTA+GGG - chr4_4:67778450-67778469 Msa0697720:intron 35.0%
! GGTTAGGGAACTTTTTGTTA+TGG - chr4_4:67778465-67778484 Msa0697720:intron 35.0%
CTACACATAATGAATGGAGT+AGG + chr4_4:67778514-67778533 None:intergenic 35.0%
ATGGTCGAAGATATATCTGA+TGG - chr4_4:67778589-67778608 Msa0697720:intron 35.0%
TGGTCGAAGATATATCTGAT+GGG - chr4_4:67778590-67778609 Msa0697720:intron 35.0%
TACAACTTCAGCAGTTACTA+GGG + chr4_4:67778649-67778668 None:intergenic 35.0%
ATACAACTTCAGCAGTTACT+AGG + chr4_4:67778650-67778669 None:intergenic 35.0%
! TCTTTTCAAAGGTCAGTTAG+TGG + chr4_4:67778721-67778740 None:intergenic 35.0%
! GACCTTTGAAAAGACAACAA+TGG - chr4_4:67778727-67778746 Msa0697720:intron 35.0%
! TAACACTACTCCTTTTCACA+GGG - chr4_4:67778854-67778873 Msa0697720:intron 35.0%
TGCTCCATCAATTATCTTCA+TGG - chr4_4:67778881-67778900 Msa0697720:intron 35.0%
TCGTCCATGAAGATAATTGA+TGG + chr4_4:67778888-67778907 None:intergenic 35.0%
ATGGACGAAATTGACAGTAT+TGG - chr4_4:67778900-67778919 Msa0697720:intron 35.0%
TGAAGCTTCCAATAAGATCA+AGG - chr4_4:67779010-67779029 Msa0697720:intron 35.0%
! ATGCTATGGTAGTGTATTAG+AGG - chr4_4:67779050-67779069 Msa0697720:intron 35.0%
! TGCTATGGTAGTGTATTAGA+GGG - chr4_4:67779051-67779070 Msa0697720:intron 35.0%
AACACACATGTTGCCAATTA+TGG + chr4_4:67779081-67779100 None:intergenic 35.0%
CAAACCTCTTCATTAGGATT+TGG + chr4_4:67779302-67779321 None:intergenic 35.0%
AAGATGCAAACCTCTTCATT+AGG + chr4_4:67779308-67779327 None:intergenic 35.0%
AAGATTGCTGAGAAGATGAA+TGG - chr4_4:67779498-67779517 Msa0697720:intron 35.0%
TTAGATGATAATAGAGCAGC+AGG + chr4_4:67779583-67779602 None:intergenic 35.0%
! TGCAATCACTTTGTTTGATG+GGG - chr4_4:67779720-67779739 Msa0697720:intron 35.0%
AGATATTATCTCAGGTCATG+AGG - chr4_4:67779824-67779843 Msa0697720:intron 35.0%
AGATATTATCTCAGGTCATG+AGG - chr4_4:67779824-67779843 Msa0697720:intron 35.0%
TTCATTTCAGAGTGAAGAAC+TGG - chr4_4:67779981-67780000 Msa0697720:intron 35.0%
TCATTTCAGAGTGAAGAACT+GGG - chr4_4:67779982-67780001 Msa0697720:intron 35.0%
AGAACTGGGTGTAATAGTAA+CGG - chr4_4:67779996-67780015 Msa0697720:intron 35.0%
! GTGGGTTACTAATAGTTGAT+TGG - chr4_4:67780033-67780052 Msa0697720:intron 35.0%
ATAAACACTTCATAGTGGTG+AGG - chr4_4:67780131-67780150 Msa0697720:intron 35.0%
TAAACACTTCATAGTGGTGA+GGG - chr4_4:67780132-67780151 Msa0697720:intron 35.0%
! CAAAGTTTGGGTTTATTCCA+TGG - chr4_4:67780190-67780209 Msa0697720:intron 35.0%
GCTATGAATTTACGTGTTCA+TGG - chr4_4:67780338-67780357 Msa0697720:intron 35.0%
CACAGAAAATTGAGCATACT+AGG + chr4_4:67780429-67780448 None:intergenic 35.0%
! CCTCAATGACATGTTTTTCT+CGG + chr4_4:67780571-67780590 None:intergenic 35.0%
AAGGTACAACTGAACAAGAA+AGG + chr4_4:67780736-67780755 None:intergenic 35.0%
!! ATGGTGAAGTTGGTGATGTT+GGG + chr4_4:67775273-67775292 None:intergenic 40.0%
!! TCTCTCTCTCGCTCTTATTT+TGG - chr4_4:67775344-67775363 Msa0697720:intron 40.0%
AGTTGATCGGATCTGATCTA+TGG - chr4_4:67775484-67775503 Msa0697720:three_prime_UTR 40.0%
TCATAATCTTAACCGTCTCG+AGG - chr4_4:67775649-67775668 Msa0697720:CDS 40.0%
AACGTAACGAGCTCAATTCT+AGG - chr4_4:67775675-67775694 Msa0697720:intron 40.0%
ACGTAACGAGCTCAATTCTA+GGG - chr4_4:67775676-67775695 Msa0697720:intron 40.0%
AATCCGTTTATTTACCCCTC+TGG - chr4_4:67775852-67775871 Msa0697720:intron 40.0%
ATCCGTTTATTTACCCCTCT+GGG - chr4_4:67775853-67775872 Msa0697720:intron 40.0%
AACCCAGAGGGGTAAATAAA+CGG + chr4_4:67775858-67775877 None:intergenic 40.0%
TGATACAAATCAACCCAGAG+GGG + chr4_4:67775869-67775888 None:intergenic 40.0%
GTGATACAAATCAACCCAGA+GGG + chr4_4:67775870-67775889 None:intergenic 40.0%
!! GGTTGATTTGTATCACCCTT+TGG - chr4_4:67775874-67775893 Msa0697720:intron 40.0%
TTTAGACAACTGGGTGTAGA+TGG + chr4_4:67775928-67775947 None:intergenic 40.0%
ATGGTTGGGTTTCGGTAATA+TGG - chr4_4:67775986-67776005 Msa0697720:intron 40.0%
TAGTCACAGACCAATCTTGT+TGG - chr4_4:67776029-67776048 Msa0697720:intron 40.0%
GGAGAAATTGAGAGTAGTGA+AGG - chr4_4:67776050-67776069 Msa0697720:intron 40.0%
TGAGAGTAGTGAAGGTGATT+TGG - chr4_4:67776058-67776077 Msa0697720:intron 40.0%
ATTTGGTCACTGGCAAACTT+TGG - chr4_4:67776075-67776094 Msa0697720:intron 40.0%
AAATATTGTCCTTTGAGCGG+TGG - chr4_4:67776250-67776269 Msa0697720:intron 40.0%
TTTGAAAAACCACCGCTCAA+AGG + chr4_4:67776262-67776281 None:intergenic 40.0%
!! CGGTGGTTTTTCAAAGTAGT+AGG - chr4_4:67776267-67776286 Msa0697720:intron 40.0%
GATACTGACACAACATCAAC+TGG - chr4_4:67776304-67776323 Msa0697720:intron 40.0%
ATATCTAGGTGTGAGCTGTA+TGG - chr4_4:67776391-67776410 Msa0697720:intron 40.0%
TGAATTTGAAAACTGGGAGG+AGG + chr4_4:67776419-67776438 None:intergenic 40.0%
!! TCTTTTGCTGTAAGATCGGT+TGG - chr4_4:67776489-67776508 Msa0697720:intron 40.0%
!! CTTTTGCTGTAAGATCGGTT+GGG - chr4_4:67776490-67776509 Msa0697720:intron 40.0%
! CCCCCCAAAAATAACTTTTC+TGG - chr4_4:67776695-67776714 Msa0697720:CDS 40.0%
CAATTGCAATTTGGACAGTG+AGG - chr4_4:67776732-67776751 Msa0697720:intron 40.0%
CAAGAACAAAGTCTTGGTCA+AGG - chr4_4:67776826-67776845 Msa0697720:intron 40.0%
CTCTAGATCATTAATTGCCG+TGG - chr4_4:67777274-67777293 Msa0697720:intron 40.0%
CTTATGTATCTTCGAGTCCA+TGG - chr4_4:67777347-67777366 Msa0697720:intron 40.0%
GGATGAAACAATAAAGCCCA+TGG + chr4_4:67777367-67777386 None:intergenic 40.0%
ACTAACAGGAAACAGCAGAA+TGG + chr4_4:67777708-67777727 None:intergenic 40.0%
GTCATGAGTTCATGACTAAC+AGG + chr4_4:67777722-67777741 None:intergenic 40.0%
CAACATATTTCCCTTCTGGA+TGG + chr4_4:67777844-67777863 None:intergenic 40.0%
! TCCAAGCAAAGTTGATCCAT+TGG - chr4_4:67777955-67777974 Msa0697720:CDS 40.0%
ACCAATGGATCAACTTTGCT+TGG + chr4_4:67777959-67777978 None:intergenic 40.0%
CCAAGACTTTCAAAAAGCTC+AGG + chr4_4:67778196-67778215 None:intergenic 40.0%
!! CCTGAGCTTTTTGAAAGTCT+TGG - chr4_4:67778193-67778212 Msa0697720:CDS 40.0%
! AATGTTTTTCCTGTACCAGG+TGG + chr4_4:67778349-67778368 None:intergenic 40.0%
! CAGGAAAAACATTGTTGGCT+AGG - chr4_4:67778356-67778375 Msa0697720:intron 40.0%
!! CATTGGAGAAGGTTCTAGAA+TGG - chr4_4:67778444-67778463 Msa0697720:intron 40.0%
!! GAGAAGGTTCTAGAATGGTT+AGG - chr4_4:67778449-67778468 Msa0697720:intron 40.0%
TTTAGGTAAGAGGTCAAACC+TGG + chr4_4:67778491-67778510 None:intergenic 40.0%
ATGGAGTAGGTTTAGGTAAG+AGG + chr4_4:67778501-67778520 None:intergenic 40.0%
! TGACGTTTTCTTGACTTCCA+TGG - chr4_4:67778561-67778580 Msa0697720:intron 40.0%
! CTTGACTTCCATGGCTTTTA+TGG - chr4_4:67778570-67778589 Msa0697720:intron 40.0%
ATCTTCGACCATAAAAGCCA+TGG + chr4_4:67778581-67778600 None:intergenic 40.0%
GGCACAAGTAAACTCAACTT+AGG - chr4_4:67778611-67778630 Msa0697720:intron 40.0%
! GCCCATTGTTGTCTTTTCAA+AGG + chr4_4:67778732-67778751 None:intergenic 40.0%
! GTAACACTACTCCTTTTCAC+AGG - chr4_4:67778853-67778872 Msa0697720:intron 40.0%
AAGCTTCAAATCCATCCAAC+TGG + chr4_4:67778998-67779017 None:intergenic 40.0%
ATCCAGGATATCAATCCGAT+TGG + chr4_4:67779234-67779253 None:intergenic 40.0%
! GCAATCACTTTGTTTGATGG+GGG - chr4_4:67779721-67779740 Msa0697720:intron 40.0%
! CAATCACTTTGTTTGATGGG+GGG - chr4_4:67779722-67779741 Msa0697720:intron 40.0%
GAACTGGGTGTAATAGTAAC+GGG - chr4_4:67779997-67780016 Msa0697720:intron 40.0%
AACTGGGTGTAATAGTAACG+GGG - chr4_4:67779998-67780017 Msa0697720:intron 40.0%
! TAGTAACGGGGAACTAAACA+TGG - chr4_4:67780010-67780029 Msa0697720:intron 40.0%
! AGTAACGGGGAACTAAACAT+GGG - chr4_4:67780011-67780030 Msa0697720:intron 40.0%
TTGATTGGATTGTTGGGTAG+TGG - chr4_4:67780048-67780067 Msa0697720:intron 40.0%
!! GGTAGTGGAGAACTAAACAT+GGG - chr4_4:67780063-67780082 Msa0697720:intron 40.0%
! GTGGGTTACTAGTTACAGTT+TGG - chr4_4:67780085-67780104 Msa0697720:intron 40.0%
!! CTAGTTACAGTTTGGTCTTG+CGG - chr4_4:67780093-67780112 Msa0697720:intron 40.0%
!! TAGTTACAGTTTGGTCTTGC+GGG - chr4_4:67780094-67780113 Msa0697720:intron 40.0%
TTGTCGTCTGGATCAAAGTT+TGG - chr4_4:67780177-67780196 Msa0697720:intron 40.0%
TGTCGTCTGGATCAAAGTTT+GGG - chr4_4:67780178-67780197 Msa0697720:intron 40.0%
TTGGGTTTATTCCATGGTGT+TGG - chr4_4:67780196-67780215 Msa0697720:intron 40.0%
CCGAGAAAAACATGTCATTG+AGG - chr4_4:67780568-67780587 Msa0697720:CDS 40.0%
ACATGTCATTGAGGAAGTTG+TGG - chr4_4:67780577-67780596 Msa0697720:CDS 40.0%
!!! GTTGGGAGGGTATTCGATTT+TGG + chr4_4:67775256-67775275 None:intergenic 45.0%
!! TGAAGTTGGTGATGTTGGGA+GGG + chr4_4:67775269-67775288 None:intergenic 45.0%
!! GATGGTGAAGTTGGTGATGT+TGG + chr4_4:67775274-67775293 None:intergenic 45.0%
ATGCTTCACTTCTACTCCGA+CGG + chr4_4:67775513-67775532 None:intergenic 45.0%
TCTGCCAAACCAACCAAACA+AGG - chr4_4:67775560-67775579 Msa0697720:CDS 45.0%
CTGCCAAACCAACCAAACAA+GGG - chr4_4:67775561-67775580 Msa0697720:CDS 45.0%
TGCCAAACCAACCAAACAAG+GGG - chr4_4:67775562-67775581 Msa0697720:CDS 45.0%
AAACCAACCAAACAAGGGGA+GGG - chr4_4:67775566-67775585 Msa0697720:CDS 45.0%
CGTAACGAGCTCAATTCTAG+GGG - chr4_4:67775677-67775696 Msa0697720:intron 45.0%
GGTGATACAAATCAACCCAG+AGG + chr4_4:67775871-67775890 None:intergenic 45.0%
ACACGTTGGATAACCCCAAA+GGG + chr4_4:67775892-67775911 None:intergenic 45.0%
!! AGTGAAGGTGATTTGGTCAC+TGG - chr4_4:67776065-67776084 Msa0697720:intron 45.0%
! GGTTTGGGTCTTTCTAGCAT+GGG - chr4_4:67776110-67776129 Msa0697720:intron 45.0%
! GTTTGGGTCTTTCTAGCATG+GGG - chr4_4:67776111-67776130 Msa0697720:intron 45.0%
TTTGGACAGTGAGGATGCTT+CGG - chr4_4:67776741-67776760 Msa0697720:intron 45.0%
AGGAGCCTGGTTCATATGTT+GGG - chr4_4:67776783-67776802 Msa0697720:intron 45.0%
ACTTCCCCAACATATGAACC+AGG + chr4_4:67776791-67776810 None:intergenic 45.0%
TGGGGAAGTCGTTAAAGTGA+TGG - chr4_4:67776802-67776821 Msa0697720:intron 45.0%
GGGGAAGTCGTTAAAGTGAT+GGG - chr4_4:67776803-67776822 Msa0697720:intron 45.0%
GATGGGCAAGAACAAAGTCT+TGG - chr4_4:67776820-67776839 Msa0697720:intron 45.0%
CTTGATCCACTCTACCATGA+TGG - chr4_4:67776876-67776895 Msa0697720:CDS 45.0%
ATTGAGCCATCATGGTAGAG+TGG + chr4_4:67776885-67776904 None:intergenic 45.0%
CAAATGCCGCTACACTATAG+TGG + chr4_4:67777001-67777020 None:intergenic 45.0%
CACTATAGTGTAGCGGCATT+TGG - chr4_4:67776999-67777018 Msa0697720:intron 45.0%
TTGTCCAATAGCCGCTATAG+TGG - chr4_4:67777065-67777084 Msa0697720:intron 45.0%
! GCTATAGCACTTTTGCGTAG+CGG - chr4_4:67777089-67777108 Msa0697720:intron 45.0%
! CGTAGCGGAATTTCAGCAAT+CGG - chr4_4:67777104-67777123 Msa0697720:intron 45.0%
!! ACAGAATCTTGGTTGGCCTA+TGG - chr4_4:67777642-67777661 Msa0697720:intron 45.0%
GGAAACTCAGTCCTTTGTCT+AGG + chr4_4:67777804-67777823 None:intergenic 45.0%
TTTCTTCAGGTCCATCCAGA+AGG - chr4_4:67777830-67777849 Msa0697720:intron 45.0%
TTCTTCAGGTCCATCCAGAA+GGG - chr4_4:67777831-67777850 Msa0697720:intron 45.0%
CGAAGAGCAACTCTAGTAGA+TGG + chr4_4:67777905-67777924 None:intergenic 45.0%
TCTTGGAATAGCTCAACCGA+AGG - chr4_4:67778210-67778229 Msa0697720:CDS 45.0%
! TGTACATTCATCAGGGTGTC+TGG - chr4_4:67778400-67778419 Msa0697720:intron 45.0%
!! GGGAACTTTTTGTTATGGCC+AGG - chr4_4:67778470-67778489 Msa0697720:intron 45.0%
! CAGTATTGGATCTGCTCGTA+TGG - chr4_4:67778914-67778933 Msa0697720:intron 45.0%
ATGGAATCTGGAAGTGGCAA+TGG - chr4_4:67778933-67778952 Msa0697720:intron 45.0%
GAACTTCTCAACCAGTTGGA+TGG - chr4_4:67778984-67779003 Msa0697720:intron 45.0%
!! AGGTTTTGATGGCCACCAAT+CGG - chr4_4:67779216-67779235 Msa0697720:intron 45.0%
CAGGATATCAATCCGATTGG+TGG + chr4_4:67779231-67779250 None:intergenic 45.0%
CACCAATCGGATTGATATCC+TGG - chr4_4:67779229-67779248 Msa0697720:intron 45.0%
! GAGAAGATGAATGGAGCATC+TGG - chr4_4:67779507-67779526 Msa0697720:intron 45.0%
GATGATAATAGAGCAGCAGG+AGG + chr4_4:67779580-67779599 None:intergenic 45.0%
!! CGGCCTTGTTGAAGCAATTA+AGG - chr4_4:67779614-67779633 Msa0697720:intron 45.0%
! ACTTTGTTTGATGGGGGGTA+AGG - chr4_4:67779727-67779746 Msa0697720:intron 45.0%
!! GGGTAGTGGAGAACTAAACA+TGG - chr4_4:67780062-67780081 Msa0697720:intron 45.0%
AGTGGAGAACTAAACATGGG+TGG - chr4_4:67780066-67780085 Msa0697720:intron 45.0%
GTGGAGAACTAAACATGGGT+GGG - chr4_4:67780067-67780086 Msa0697720:intron 45.0%
!! AGTTACAGTTTGGTCTTGCG+GGG - chr4_4:67780095-67780114 Msa0697720:intron 45.0%
ATTTGGCAAACGTTGTCGTC+TGG - chr4_4:67780165-67780184 Msa0697720:intron 45.0%
!! GAATGTTTGCTCTGAGAGAG+AGG - chr4_4:67780484-67780503 Msa0697720:CDS 45.0%
!! GACACAGGAGGATTTTGAGA+TGG - chr4_4:67780518-67780537 Msa0697720:CDS 45.0%
CTTCTTCATCACCTTTGCCA+CGG + chr4_4:67780544-67780563 None:intergenic 45.0%
ACACACATTACCGCAGTTCA+TGG - chr4_4:67780656-67780675 Msa0697720:intron 45.0%
!! GTGAAGTTGGTGATGTTGGG+AGG + chr4_4:67775270-67775289 None:intergenic 50.0%
TTCTTCTTCTTCGGACGCGA+TGG + chr4_4:67775292-67775311 None:intergenic 50.0%
ATCGCGTCCGAAGAAGAAGA+AGG - chr4_4:67775291-67775310 Msa0697720:three_prime_UTR 50.0%
ATCTGATCTATGGCTGCCGT+CGG - chr4_4:67775494-67775513 Msa0697720:three_prime_UTR 50.0%
AGTAGAAGTGAAGCATGCCG+AGG - chr4_4:67775517-67775536 Msa0697720:three_prime_UTR 50.0%
GTAGAAGTGAAGCATGCCGA+GGG - chr4_4:67775518-67775537 Msa0697720:three_prime_UTR 50.0%
! CTCCCCTTGTTTGGTTGGTT+TGG + chr4_4:67775567-67775586 None:intergenic 50.0%
CAAACCAACCAAACAAGGGG+AGG - chr4_4:67775565-67775584 Msa0697720:CDS 50.0%
GACACGTTGGATAACCCCAA+AGG + chr4_4:67775893-67775912 None:intergenic 50.0%
GTTATCCAACGTGTCGCAGA+TGG - chr4_4:67775898-67775917 Msa0697720:intron 50.0%
TAGAGGACATTGTGGCTGAG+AGG - chr4_4:67775963-67775982 Msa0697720:intron 50.0%
ATTGTGGCTGAGAGGATGGT+TGG - chr4_4:67775971-67775990 Msa0697720:intron 50.0%
TTGTGGCTGAGAGGATGGTT+GGG - chr4_4:67775972-67775991 Msa0697720:intron 50.0%
CTGAGAGGATGGTTGGGTTT+CGG - chr4_4:67775978-67775997 Msa0697720:intron 50.0%
! GGGTTTGGGTCTTTCTAGCA+TGG - chr4_4:67776109-67776128 Msa0697720:intron 50.0%
! GTCTTTCTAGCATGGGGAGT+CGG - chr4_4:67776117-67776136 Msa0697720:intron 50.0%
TTGGACAGTGAGGATGCTTC+GGG - chr4_4:67776742-67776761 Msa0697720:intron 50.0%
GGAAGAACTGCAGCTTCTTC+AGG - chr4_4:67776763-67776782 Msa0697720:intron 50.0%
CAGGAGCCTGGTTCATATGT+TGG - chr4_4:67776782-67776801 Msa0697720:intron 50.0%
GGAGCCTGGTTCATATGTTG+GGG - chr4_4:67776784-67776803 Msa0697720:intron 50.0%
GTGCTATAGCGCCACTATAG+CGG + chr4_4:67777079-67777098 None:intergenic 50.0%
CCATGTATGCTGACAGAGGA+TGG + chr4_4:67778265-67778284 None:intergenic 50.0%
CCATCCTCTGTCAGCATACA+TGG - chr4_4:67778262-67778281 Msa0697720:CDS 50.0%
ACAGCCATGTATGCTGACAG+AGG + chr4_4:67778269-67778288 None:intergenic 50.0%
! TCACAGGGTGTCTTGCTCTA+TGG - chr4_4:67778322-67778341 Msa0697720:intron 50.0%
! CACAGGGTGTCTTGCTCTAT+GGG - chr4_4:67778323-67778342 Msa0697720:intron 50.0%
! AACATTGTTGGCTAGGGCAG+TGG - chr4_4:67778363-67778382 Msa0697720:intron 50.0%
GGATCTGCTCGTATGGAATC+TGG - chr4_4:67778921-67778940 Msa0697720:intron 50.0%
GCTCGTATGGAATCTGGAAG+TGG - chr4_4:67778927-67778946 Msa0697720:intron 50.0%
TGAAGTGCAGCGTACTATGC+TGG - chr4_4:67778962-67778981 Msa0697720:intron 50.0%
GCTGGAACTTCTCAACCAGT+TGG - chr4_4:67778980-67778999 Msa0697720:intron 50.0%
ATCTTCCTGTCAATCCGTCC+AGG + chr4_4:67779272-67779291 None:intergenic 50.0%
! AGCATCTGGTGCTGAGCTTA+AGG - chr4_4:67779521-67779540 Msa0697720:intron 50.0%
CAGGTCATGAGGCGAAACAA+AGG - chr4_4:67779835-67779854 Msa0697720:intron 50.0%
AACGGGGAACTAAACATGGG+TGG - chr4_4:67780014-67780033 Msa0697720:intron 50.0%
ACGGGGAACTAAACATGGGT+GGG - chr4_4:67780015-67780034 Msa0697720:intron 50.0%
TTCATAGTGGTGAGGGTGAC+TGG - chr4_4:67780139-67780158 Msa0697720:intron 50.0%
TCATAGTGGTGAGGGTGACT+GGG - chr4_4:67780140-67780159 Msa0697720:intron 50.0%
!! TGTTTGCTCTGAGAGAGAGG+AGG - chr4_4:67780487-67780506 Msa0697720:CDS 50.0%
!! GTTTGCTCTGAGAGAGAGGA+GGG - chr4_4:67780488-67780507 Msa0697720:CDS 50.0%
!!! TTTTGAGATGGCCGTGGCAA+AGG - chr4_4:67780530-67780549 Msa0697720:CDS 50.0%
CGTGGCAAAGGTGATGAAGA+AGG - chr4_4:67780542-67780561 Msa0697720:CDS 50.0%
TTCGGACGCGATGGTGAAGT+TGG + chr4_4:67775283-67775302 None:intergenic 55.0%
TTGGCAGAGCAATGCTCCTC+CGG + chr4_4:67775548-67775567 None:intergenic 55.0%
! AGACCCTCCCCTTGTTTGGT+TGG + chr4_4:67775572-67775591 None:intergenic 55.0%
GGTGAAGGAGCTGAAGCTCA+TGG + chr4_4:67775619-67775638 None:intergenic 55.0%
GTGAACCATCTGCGACACGT+TGG + chr4_4:67775906-67775925 None:intergenic 55.0%
GGACATTGTGGCTGAGAGGA+TGG - chr4_4:67775967-67775986 Msa0697720:intron 55.0%
AGCGCCACTATAGCGGCTAT+TGG + chr4_4:67777072-67777091 None:intergenic 55.0%
GGAGCATGCTCCCTGTGAAA+AGG + chr4_4:67778867-67778886 None:intergenic 55.0%
!! GTCTCAGGAGTGCTTGATCC+AGG + chr4_4:67779250-67779269 None:intergenic 55.0%
GATCAAGCACTCCTGAGACC+TGG - chr4_4:67779251-67779270 Msa0697720:intron 55.0%
AAGCACTCCTGAGACCTGGA+CGG - chr4_4:67779255-67779274 Msa0697720:intron 55.0%
TGTCAATCCGTCCAGGTCTC+AGG + chr4_4:67779265-67779284 None:intergenic 55.0%
!! TGAGACCTGGACGGATTGAC+AGG - chr4_4:67779264-67779283 Msa0697720:intron 55.0%
GTGAGGGTGACTGGGTCATT+TGG - chr4_4:67780148-67780167 Msa0697720:intron 55.0%
TAGGCTGTGTGCACTGAAGC+TGG - chr4_4:67780462-67780481 Msa0697720:CDS 55.0%
!!! GGAGGATTTTGAGATGGCCG+TGG - chr4_4:67780524-67780543 Msa0697720:CDS 55.0%
ACCAGAGCGACCATGAACTG+CGG + chr4_4:67780669-67780688 None:intergenic 55.0%
ACGGAGACCCTCCCCTTGTT+TGG + chr4_4:67775576-67775595 None:intergenic 60.0%
CGTTACGTTGCGCCTCGAGA+CGG + chr4_4:67775664-67775683 None:intergenic 60.0%
CTGCAGCTTCTTCAGGAGCC+TGG - chr4_4:67776770-67776789 Msa0697720:intron 60.0%
GTCTTGCTCTATGGGCCACC+TGG - chr4_4:67778331-67778350 Msa0697720:intron 60.0%
CTCTATGGGCCACCTGGTAC+AGG - chr4_4:67778337-67778356 Msa0697720:intron 60.0%
! GAGGAGGGTACACGTGACAC+AGG - chr4_4:67780503-67780522 Msa0697720:CDS 60.0%
! GAGGGTACACGTGACACAGG+AGG - chr4_4:67780506-67780525 Msa0697720:CDS 60.0%
ACCGCAGTTCATGGTCGCTC+TGG - chr4_4:67780665-67780684 Msa0697720:intron 60.0%
! GAAGCATGCCGAGGGTGCAC+CGG - chr4_4:67775526-67775545 Msa0697720:three_prime_UTR 65.0%
ATGCTCCTCCGGTGCACCCT+CGG + chr4_4:67775537-67775556 None:intergenic 65.0%
! GCATGCCGAGGGTGCACCGG+AGG - chr4_4:67775529-67775548 Msa0697720:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 67775225 67780930 67775225 ID=Msa0697720;Name=Msa0697720
chr4_4 mRNA 67775225 67780930 67775225 ID=Msa0697720-mRNA-1;Parent=Msa0697720;Name=Msa0697720-mRNA-1;_AED=0.10;_eAED=0.10;_QI=135|1|1|1|0.8|0.63|11|259|417
chr4_4 exon 67775225 67775342 67775225 ID=Msa0697720-mRNA-1:exon:20058;Parent=Msa0697720-mRNA-1
chr4_4 exon 67775409 67775690 67775409 ID=Msa0697720-mRNA-1:exon:20057;Parent=Msa0697720-mRNA-1
chr4_4 exon 67776613 67776723 67776613 ID=Msa0697720-mRNA-1:exon:20056;Parent=Msa0697720-mRNA-1
chr4_4 exon 67776839 67776937 67776839 ID=Msa0697720-mRNA-1:exon:20055;Parent=Msa0697720-mRNA-1
chr4_4 exon 67777124 67777280 67777124 ID=Msa0697720-mRNA-1:exon:20054;Parent=Msa0697720-mRNA-1
chr4_4 exon 67777664 67777827 67777664 ID=Msa0697720-mRNA-1:exon:20053;Parent=Msa0697720-mRNA-1
chr4_4 exon 67777924 67777986 67777924 ID=Msa0697720-mRNA-1:exon:20052;Parent=Msa0697720-mRNA-1
chr4_4 exon 67778092 67778316 67778092 ID=Msa0697720-mRNA-1:exon:20051;Parent=Msa0697720-mRNA-1
chr4_4 exon 67779308 67779405 67779308 ID=Msa0697720-mRNA-1:exon:20050;Parent=Msa0697720-mRNA-1
chr4_4 exon 67780457 67780674 67780457 ID=Msa0697720-mRNA-1:exon:20049;Parent=Msa0697720-mRNA-1
chr4_4 exon 67780818 67780930 67780818 ID=Msa0697720-mRNA-1:exon:20048;Parent=Msa0697720-mRNA-1
chr4_4 five_prime_UTR 67780818 67780930 67780818 ID=Msa0697720-mRNA-1:five_prime_utr;Parent=Msa0697720-mRNA-1
chr4_4 five_prime_UTR 67780653 67780674 67780653 ID=Msa0697720-mRNA-1:five_prime_utr;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67780457 67780652 67780457 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67779308 67779405 67779308 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67778092 67778316 67778092 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67777924 67777986 67777924 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67777664 67777827 67777664 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67777124 67777280 67777124 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67776839 67776937 67776839 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67776613 67776723 67776613 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 CDS 67775550 67775690 67775550 ID=Msa0697720-mRNA-1:cds;Parent=Msa0697720-mRNA-1
chr4_4 three_prime_UTR 67775409 67775549 67775409 ID=Msa0697720-mRNA-1:three_prime_utr;Parent=Msa0697720-mRNA-1
chr4_4 three_prime_UTR 67775225 67775342 67775225 ID=Msa0697720-mRNA-1:three_prime_utr;Parent=Msa0697720-mRNA-1
Gene Sequence

>Msa0697720

ATGGCTGCCGTCGGAGTAGAAGTGAAGCATGCCGAGGGTGCACCGGAGGAGCATTGCTCTGCCAAACCAACCAAACAAGGGGAGGGTCTCCGTCAATACTATACTCAGCACATCCATGAGCTTCAGCTCCTTCACCGTCAAAAGAATCATAATCTTAACCGTCTCGAGGCGCAACGTAACGAGCTCAATTCTAGGGTGAGGATGCTTCGGGAAGAACTGCAGCTTCTTCAGGAGCCTGGTTCATATGTTGGGGAAGTCGTTAAAGTGATGGGCAAGAACAAAGTCTTGGTCAAGGTCCATCCAGAAGGGAAATATGTTGTTGATATTGATAAAAATATTGACATCACAAAGATTACACCATCTACTAGAGTTGCTCTTCGCAACGACAGTTATGTGCTTCATTTAGTTCTTCCAAGCAAAGTTGATCCATTGGTTAATCTGATGAAAGTTGAGAAAGTTCCTGATTCTACATATGACATGATTGGTGGTTTAGACCAACAAATCAAAGAAATAAAAGAGGTCATTGAGCTTCCAATTAAACATCCTGAGCTTTTTGAAAGTCTTGGAATAGCTCAACCGAAGGGTGTCTTGCTCTATGGGCCACCTGGTACAGGAAAAACATTGTTGGCTAGGGCAGTGGCACATCATACTGATTGTACATTCATCAGGGTGTCTGGTTCTGAACTTGTTCAGAAATACATTGGAGAAGGTTCTAGAATGGTTAGGGAACTTTTTGTTATGGCCAGGGAGCATGCTCCATCAATTATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGTATGGAATCTGGAAGTGGCAATGGTGATAGTGAAGTGCAGCGTACTATGCTGGAACTTCTCAACCAGTTGGATGGATTTGAAGCTTCCAATAAGATCAAGGTTTTGATGGCCACCAATCGGATTGATATCCTGGATCAAGCACTCCTGAGACCTGGACGGATTGACAGGAAGATTGAATTTCCAAATCCTAATGAAGAGTCTCGCCGAGATATCTTGAAAATCCATTCAAGAAGAATGAATTTAATGCGTGGTATTGACTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCTGAGCTTAAGGCTGTGTGCACTGAAGCTGGAATGTTTGCTCTGAGAGAGAGGAGGGTACACGTGACACAGGAGGATTTTGAGATGGCCGTGGCAAAGGTGATGAAGAAGGAGACCGAGAAAAACATGTCATTGAGGAAGTTGTGGAAGTGA
Protein sequence

>Msa0697720

MAAVGVEVKHAEGAPEEHCSAKPTKQGEGLRQYYTQHIHELQLLHRQKNHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRRDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*