AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431210 MtrunA17_Chr3g0135861 98.834 343 4 0 1 343 1 343 0.0 699
Msa0431210 MtrunA17_Chr6g0488081 55.063 316 135 3 21 336 5 313 5.79e-124 358
Msa0431210 MtrunA17_Chr6g0488341 47.909 263 109 4 74 336 4 238 9.47e-80 243
Msa0431210 MtrunA17_Chr6g0463041 49.398 249 105 3 107 336 1 247 3.23e-79 242
Msa0431210 MtrunA17_Chr5g0396801 38.272 324 156 8 33 331 36 340 4.41e-65 209
Msa0431210 MtrunA17_Chr8g0347451 35.180 361 182 11 3 331 15 355 1.36e-60 198
Msa0431210 MtrunA17_Chr7g0240341 33.856 319 164 10 32 329 22 314 1.87e-47 162
Msa0431210 MtrunA17_Chr7g0240341 26.360 239 142 10 116 341 11 228 7.07e-12 65.5
Msa0431210 MtrunA17_Chr8g0385571 32.459 305 171 8 35 331 227 504 1.26e-46 165
Msa0431210 MtrunA17_Chr7g0252401 32.459 305 168 7 35 331 207 481 2.54e-45 161
Msa0431210 MtrunA17_Chr1g0149111 32.237 304 171 8 32 329 136 410 1.09e-44 158
Msa0431210 MtrunA17_Chr1g0149111 28.972 214 131 4 14 227 215 407 1.70e-19 89.0
Msa0431210 MtrunA17_Chr3g0131501 31.494 308 174 8 33 331 203 482 2.53e-43 155
Msa0431210 MtrunA17_Chr3g0131501 27.184 206 122 5 35 233 299 483 2.41e-16 79.7
Msa0431210 MtrunA17_Chr3g0137941 31.023 303 176 7 32 329 119 393 5.28e-42 150
Msa0431210 MtrunA17_Chr3g0137941 30.841 214 127 3 14 227 198 390 2.72e-21 94.0
Msa0431210 MtrunA17_Chr2g0296061 27.914 326 184 6 37 329 17 324 2.09e-41 147
Msa0431210 MtrunA17_Chr2g0296061 26.570 207 134 5 129 328 13 208 2.59e-16 78.6
Msa0431210 MtrunA17_Chr5g0436041 33.123 317 169 8 32 330 31 322 9.24e-41 145
Msa0431210 MtrunA17_Chr5g0436041 30.374 214 130 3 19 232 129 323 4.34e-16 78.2
Msa0431210 MtrunA17_Chr4g0006851 32.877 292 157 7 46 330 100 359 1.73e-40 146
Msa0431210 MtrunA17_Chr4g0006851 27.333 150 97 3 194 342 140 278 1.80e-13 70.9
Msa0431210 MtrunA17_Chr4g0063561 30.368 326 190 9 11 329 99 394 3.54e-40 145
Msa0431210 MtrunA17_Chr3g0135801 30.631 333 196 9 14 331 11 323 8.35e-40 143
Msa0431210 MtrunA17_Chr4g0067231 27.576 330 182 7 37 329 16 325 1.21e-38 140
Msa0431210 MtrunA17_Chr4g0067231 28.571 210 128 7 129 328 12 209 3.53e-18 84.0
Msa0431210 MtrunA17_Chr7g0242311 29.617 287 165 4 46 326 98 353 2.72e-36 135
Msa0431210 MtrunA17_Chr7g0242311 28.000 150 96 3 194 342 138 276 2.03e-15 76.6
Msa0431210 MtrunA17_Chr6g0488171 53.153 111 50 1 226 336 1 109 3.31e-36 127
Msa0431210 MtrunA17_Chr4g0000261 27.327 333 184 11 32 340 63 361 8.55e-30 117
Msa0431210 MtrunA17_Chr3g0088301 30.769 312 176 11 31 326 89 376 6.85e-29 115
Msa0431210 MtrunA17_Chr8g0393031 31.186 295 160 11 33 309 16 285 1.43e-28 112
Msa0431210 MtrunA17_Chr7g0269701 26.316 304 192 8 37 329 24 306 1.02e-27 110
Msa0431210 MtrunA17_Chr8g0352031 30.547 311 179 9 31 326 64 352 9.71e-27 108
Msa0431210 MtrunA17_Chr8g0382201 28.000 325 175 9 33 331 193 484 3.08e-26 108
Msa0431210 MtrunA17_Chr2g0328891 30.476 315 179 11 31 329 62 352 3.75e-26 107
Msa0431210 MtrunA17_Chr1g0195101 27.027 296 180 11 47 329 31 303 5.15e-25 103
Msa0431210 MtrunA17_Chr1g0195101 27.957 186 116 5 147 330 35 204 1.32e-12 67.8
Msa0431210 MtrunA17_Chr4g0040341 29.524 315 176 11 31 326 71 358 5.13e-24 101
Msa0431210 MtrunA17_Chr4g0004571 28.188 298 184 8 33 324 14 287 3.07e-23 97.8
Msa0431210 MtrunA17_Chr4g0004571 25.943 212 129 6 21 224 95 286 8.48e-11 62.0
Msa0431210 MtrunA17_Chr5g0423111 26.014 296 183 8 47 329 33 305 3.45e-23 98.6
Msa0431210 MtrunA17_Chr3g0115801 26.361 349 202 9 6 331 89 405 3.79e-23 99.4
Msa0431210 MtrunA17_Chr8g0366791 28.431 306 197 7 33 330 7 298 1.32e-22 96.3
Msa0431210 MtrunA17_Chr5g0436571 28.028 289 185 8 51 319 24 309 1.39e-21 94.0
Msa0431210 MtrunA17_Chr5g0411411 27.451 306 200 7 33 330 7 298 9.97e-21 90.9
Msa0431210 MtrunA17_Chr3g0086811 25.680 331 216 8 16 326 8 328 1.23e-18 85.9
Msa0431210 MtrunA17_Chr7g0275411 27.509 269 169 10 70 326 78 332 1.17e-16 79.7
Msa0431210 MtrunA17_Chr8g0386871 23.920 301 184 7 36 327 321 585 2.74e-16 80.1
Msa0431210 MtrunA17_Chr4g0008061 24.503 302 196 6 37 328 17 296 2.98e-16 78.2
Msa0431210 MtrunA17_Chr8g0372531 23.368 291 184 9 51 323 30 299 1.07e-15 76.6
Msa0431210 MtrunA17_Chr1g0201361 24.062 320 196 8 20 335 36 312 1.83e-15 76.3
Msa0431210 MtrunA17_Chr6g0488301 38.462 104 21 1 226 329 1 61 2.92e-15 70.1
Msa0431210 MtrunA17_Chr3g0126331 26.007 273 179 8 66 326 123 384 6.77e-15 75.1
Msa0431210 MtrunA17_Chr6g0463351 27.240 279 158 8 51 318 83 327 9.30e-15 74.3
Msa0431210 MtrunA17_Chr6g0463351 25.366 205 131 3 36 236 161 347 1.43e-13 70.9
Msa0431210 MtrunA17_Chr2g0331771 25.333 300 191 10 33 324 154 428 2.39e-14 73.6
Msa0431210 MtrunA17_Chr1g0196921 21.290 310 209 9 34 331 13 299 2.66e-14 72.4
Msa0431210 MtrunA17_Chr8g0383321 24.116 311 191 8 21 329 38 305 6.76e-14 71.6
Msa0431210 MtrunA17_Chr5g0431531 26.452 310 187 8 31 329 35 314 1.07e-13 70.9
Msa0431210 MtrunA17_Chr3g0103681 22.654 309 202 9 31 326 11 295 2.96e-13 69.3
Msa0431210 MtrunA17_Chr7g0241521 22.903 310 205 8 31 329 13 299 1.15e-12 67.8
Msa0431210 MtrunA17_Chr2g0293621 24.671 304 190 9 51 337 45 326 1.72e-12 67.4
Msa0431210 MtrunA17_Chr4g0046981 22.830 311 210 6 33 331 10 302 4.15e-12 66.2
Msa0431210 MtrunA17_Chr7g0219891 29.189 185 101 6 146 322 36 198 1.24e-11 64.7
Msa0431210 MtrunA17_Chr6g0488161 40.741 81 37 1 21 90 5 85 1.93e-11 59.7
Msa0431210 MtrunA17_Chr4g0028531 25.633 316 195 14 21 323 9 297 4.16e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431210 AT1G14560.1 64.118 340 109 3 1 338 1 329 2.01e-146 416
Msa0431210 AT1G14560.2 64.856 313 97 3 1 311 1 302 3.36e-132 379
Msa0431210 AT4G26180.1 55.732 314 133 3 26 339 12 319 2.99e-126 365
Msa0431210 AT4G26180.2 55.944 286 120 3 26 311 12 291 6.92e-114 332
Msa0431210 AT1G14560.3 65.812 234 75 2 107 338 1 231 5.01e-110 320
Msa0431210 AT4G01100.1 36.697 327 159 8 33 331 40 346 2.83e-60 197
Msa0431210 AT4G01100.2 33.067 375 182 10 2 331 10 360 6.36e-57 189
Msa0431210 AT4G01100.3 35.556 315 157 7 44 331 1 296 6.19e-56 184
Msa0431210 AT4G01100.3 27.363 201 130 6 37 227 97 291 1.11e-14 73.9
Msa0431210 AT2G37890.1 33.125 320 171 9 33 334 43 337 3.57e-49 168
Msa0431210 AT2G37890.1 29.949 197 121 4 32 227 149 329 1.40e-20 91.7
Msa0431210 AT2G37890.1 29.870 231 133 9 121 341 35 246 1.48e-14 73.9
Msa0431210 AT3G53940.1 33.333 321 171 9 32 334 70 365 9.17e-49 167
Msa0431210 AT3G55640.1 32.797 311 172 8 34 329 37 325 8.61e-48 164
Msa0431210 AT3G55640.4 32.797 311 172 8 34 329 37 325 8.61e-48 164
Msa0431210 AT5G61810.2 30.921 304 163 7 33 326 63 329 4.13e-42 149
Msa0431210 AT5G61810.2 26.768 198 122 3 35 230 156 332 3.16e-15 75.9
Msa0431210 AT5G48970.1 27.964 329 183 6 37 329 24 334 4.60e-41 147
Msa0431210 AT5G48970.1 27.273 209 132 5 129 329 20 216 4.72e-18 84.3
Msa0431210 AT3G21390.1 29.091 330 177 7 37 329 21 330 4.67e-41 147
Msa0431210 AT3G21390.1 29.469 207 126 5 129 328 17 210 1.13e-19 89.0
Msa0431210 AT5G61810.1 30.744 309 167 7 33 331 206 477 5.13e-41 150
Msa0431210 AT5G51050.1 29.236 301 179 5 35 329 223 495 5.76e-41 150
Msa0431210 AT4G32400.1 32.131 305 170 8 32 329 111 385 5.97e-41 148
Msa0431210 AT4G32400.1 27.830 212 134 3 26 237 200 392 5.91e-17 81.6
Msa0431210 AT3G21390.2 29.091 330 177 7 37 329 43 352 6.76e-41 147
Msa0431210 AT3G21390.2 29.469 207 126 5 129 328 39 232 1.68e-19 88.6
Msa0431210 AT3G51870.1 30.743 296 168 4 46 335 102 366 1.09e-39 144
Msa0431210 AT3G51870.1 27.638 199 120 5 145 342 105 280 4.02e-14 73.2
Msa0431210 AT5G56450.1 30.380 316 183 7 31 329 30 325 1.41e-37 137
Msa0431210 AT5G48970.2 29.181 281 159 5 71 329 1 263 1.83e-37 135
Msa0431210 AT5G07320.1 29.452 292 161 8 44 326 218 473 2.55e-37 140
Msa0431210 AT5G07320.1 31.658 199 111 6 35 230 300 476 2.48e-17 83.2
Msa0431210 AT5G01500.1 30.795 302 166 6 46 338 130 397 1.13e-36 137
Msa0431210 AT5G01500.1 28.426 197 119 4 144 339 132 307 1.98e-15 77.4
Msa0431210 AT3G55640.2 31.624 234 129 5 34 254 37 252 1.38e-31 119
Msa0431210 AT3G55640.2 26.577 222 134 6 130 341 37 239 7.77e-15 73.9
Msa0431210 AT3G55640.3 31.624 234 129 5 34 254 37 252 1.38e-31 119
Msa0431210 AT3G55640.3 26.577 222 134 6 130 341 37 239 7.77e-15 73.9
Msa0431210 AT3G53940.2 33.054 239 123 7 32 254 70 287 3.01e-31 119
Msa0431210 AT3G53940.2 30.493 223 126 8 131 343 73 276 7.15e-16 77.4
Msa0431210 AT3G20240.1 26.814 317 179 8 33 326 50 336 6.11e-31 120
Msa0431210 AT2G47490.1 29.085 306 178 11 47 337 29 310 3.30e-29 114
Msa0431210 AT2G47490.1 29.897 194 119 5 138 330 24 201 2.25e-12 67.4
Msa0431210 AT5G13490.1 30.619 307 178 10 34 326 87 372 1.09e-26 109
Msa0431210 AT5G13490.2 30.619 307 178 10 34 326 87 372 1.09e-26 109
Msa0431210 AT1G25380.1 28.013 307 185 10 47 339 33 317 1.21e-26 108
Msa0431210 AT1G25380.2 28.013 307 185 10 47 339 33 317 1.21e-26 108
Msa0431210 AT5G64970.1 28.308 325 174 11 33 331 133 424 1.44e-26 109
Msa0431210 AT4G28390.1 30.968 310 178 11 31 326 79 366 1.72e-26 108
Msa0431210 AT4G28390.2 30.968 310 178 11 31 326 79 366 1.72e-26 108
Msa0431210 AT5G17400.1 30.503 318 167 12 31 325 10 296 5.03e-26 105
Msa0431210 AT3G08580.2 29.808 312 180 10 31 326 80 368 7.00e-26 107
Msa0431210 AT3G08580.1 29.808 312 180 10 31 326 80 368 7.00e-26 107
Msa0431210 AT5G64970.2 27.500 320 173 11 38 331 14 300 4.48e-24 100
Msa0431210 AT4G11440.1 29.114 316 185 10 39 343 330 617 5.86e-23 100
Msa0431210 AT4G11440.2 29.114 316 185 10 39 343 330 617 5.86e-23 100
Msa0431210 AT1G78180.1 28.528 326 172 11 33 331 126 417 1.13e-22 98.6
Msa0431210 AT5G66380.1 25.949 316 198 9 37 336 12 307 2.71e-20 90.1
Msa0431210 AT5G64970.3 27.547 265 140 9 32 270 132 370 3.27e-19 88.2
Msa0431210 AT5G46800.2 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0431210 AT5G46800.3 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0431210 AT5G46800.1 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0431210 AT1G74240.1 25.740 338 227 7 2 326 7 333 7.19e-19 87.0
Msa0431210 AT1G14140.1 24.430 307 202 8 35 331 16 302 9.62e-19 85.9
Msa0431210 AT5G58970.1 25.325 308 194 9 31 326 12 295 1.01e-18 85.9
Msa0431210 AT2G39970.1 26.441 295 184 9 51 319 24 311 5.76e-15 75.1
Msa0431210 AT4G03115.1 22.222 324 215 7 15 331 18 311 8.21e-15 74.7
Msa0431210 AT2G30160.1 25.407 307 190 8 35 329 42 321 8.55e-15 74.7
Msa0431210 AT4G39460.2 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0431210 AT4G39460.1 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0431210 AT4G39460.3 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0431210 AT4G03115.3 22.222 324 215 7 15 331 50 343 1.11e-14 74.7
Msa0431210 AT1G79900.1 26.071 280 168 9 51 324 32 278 1.43e-14 73.6
Msa0431210 AT2G33820.1 24.204 314 206 8 31 331 14 308 1.49e-14 73.9
Msa0431210 AT1G74240.2 26.316 266 179 4 71 326 27 285 1.58e-14 73.9
Msa0431210 AT1G34065.1 24.611 321 191 10 19 335 68 341 5.84e-14 72.4
Msa0431210 AT1G34065.1 28.019 207 124 6 32 237 160 342 2.53e-12 67.4
Msa0431210 AT1G34065.2 24.611 321 191 10 19 335 61 334 6.91e-14 72.0
Msa0431210 AT1G34065.2 27.273 209 123 5 32 237 153 335 2.62e-12 67.4
Msa0431210 AT5G42130.1 24.312 218 143 3 23 236 200 399 3.03e-13 70.5
Msa0431210 AT5G42130.1 27.143 280 172 7 48 322 131 383 1.31e-11 65.9
Msa0431210 AT4G03115.2 28.804 184 104 4 144 326 51 208 3.37e-13 68.6
Msa0431210 AT4G03115.4 28.877 187 106 4 144 329 51 211 4.70e-13 68.2
Msa0431210 AT4G03115.5 22.692 260 166 6 77 331 11 240 4.90e-13 68.6
Msa0431210 AT4G27940.1 24.910 277 176 9 66 326 144 404 5.21e-13 70.1
Msa0431210 AT1G07030.1 24.490 196 123 3 131 326 40 210 5.29e-13 69.3
Msa0431210 AT1G07030.1 25.081 307 188 8 35 329 40 316 1.21e-11 65.5
Msa0431210 AT4G03115.6 22.692 260 166 6 77 331 19 248 6.21e-13 68.2
Msa0431210 AT1G72820.1 24.013 304 180 7 57 326 49 335 7.57e-13 68.9
Msa0431210 AT1G72820.2 24.013 304 180 7 57 326 49 335 7.57e-13 68.9
Msa0431210 AT2G33820.3 23.602 322 206 9 31 331 14 316 4.97e-12 66.2
Msa0431210 AT3G54110.1 22.654 309 203 9 33 329 13 297 7.42e-12 65.9
Msa0431210 AT2G46320.1 24.528 265 164 9 77 326 109 352 4.78e-11 63.9

Find 136 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTGTAAGTTTATATTATT+TGG 0.113461 3_2:-83241909 Msa0431210:three_prime_UTR
ACGAACTCCAGCTTCTTTAT+AGG 0.187276 3_2:+83244169 None:intergenic
AAAACGGTGGCGTTTAATTA+AGG 0.202110 3_2:+83246384 None:intergenic
TCATCAGGTCCAACCCTTAC+TGG 0.241628 3_2:-83243701 Msa0431210:intron
CCGTACCAAACTTGCTTATC+AGG 0.253158 3_2:-83244824 Msa0431210:intron
GGAGCTCTTGCTGGATTGTT+TGG 0.263281 3_2:-83243578 Msa0431210:CDS
CTTTCTTGTGGAGCTCTTGC+TGG 0.277059 3_2:-83243587 Msa0431210:CDS
ACTGTAAGTTTATATTATTT+GGG 0.278234 3_2:-83241908 Msa0431210:three_prime_UTR
TCTCTTTCCTTAGAAGTAGA+TGG 0.284343 3_2:-83246259 Msa0431210:five_prime_UTR
CGTTATCCCATCTACTTCTA+AGG 0.310537 3_2:+83246252 None:intergenic
ATGGACTTCTGATGTTCTTC+AGG 0.313245 3_2:+83243620 None:intergenic
TTTGGTACGGGCAAGATCTA+AGG 0.328897 3_2:+83244837 None:intergenic
GGGTGGAGGCAGTTGTTTGC+AGG 0.333389 3_2:-83243425 Msa0431210:CDS
ATGCATGGTATTTGCTTGAT+TGG 0.334733 3_2:-83241848 Msa0431210:three_prime_UTR
CTTTACCTGATAAGCAAGTT+TGG 0.338336 3_2:+83244819 None:intergenic
CCTGTACATAATGGCATTAA+AGG 0.342412 3_2:-83244206 Msa0431210:CDS
ATTAACTCTTTAACATAAAC+AGG 0.344279 3_2:+83246089 None:intergenic
TTAATTGCTGGTGGATTTGC+TGG 0.353886 3_2:-83246071 Msa0431210:CDS
AAGTCTCGATCAGTTTCTTC+AGG 0.364975 3_2:-83242290 Msa0431210:CDS
GAGCTCTTGCTGGATTGTTT+GGG 0.366817 3_2:-83243577 Msa0431210:CDS
CTAACATGGGATAATTGTTC+AGG 0.368987 3_2:+83244929 None:intergenic
AGATTCTAGATTGGCTGGTT+TGG 0.369557 3_2:-83246159 Msa0431210:CDS
ACCATCTTTGATACATCCTT+TGG 0.378479 3_2:+83244259 None:intergenic
AAACGGTGGCGTTTAATTAA+GGG 0.386691 3_2:+83246385 None:intergenic
TGGGCCTGTTTCTTCGCTTT+CGG 0.389392 3_2:+83246595 None:intergenic
AGCCTGCAAAATGGAGCTAA+TGG 0.389932 3_2:-83243503 Msa0431210:CDS
ACCGGTGGATTTCATAATCT+TGG 0.391806 3_2:-83245177 Msa0431210:CDS
CTGAACAATTATCCCATGTT+AGG 0.395653 3_2:-83244928 Msa0431210:CDS
AGGAAGATTGTTCGAAATCA+AGG 0.399175 3_2:-83243446 Msa0431210:CDS
TTCTGTTGCGCCTCTCGAAC+GGG 0.399548 3_2:-83246033 Msa0431210:CDS
TTTGTTGATGAATTTGATTA+TGG 0.402515 3_2:+83246544 None:intergenic
GAGCTTCAAAGTGGATAGAT+TGG 0.403936 3_2:-83246221 Msa0431210:five_prime_UTR
TTTAATTAAGGGAGGAGAAC+GGG 0.406527 3_2:+83246396 None:intergenic
TTCATTATTTCTTAATCCTT+AGG 0.412799 3_2:-83242070 Msa0431210:three_prime_UTR
TTCTTCTCAAGATTCTAGAT+TGG 0.416611 3_2:-83246168 Msa0431210:CDS
ACTGGAATTCTTCCATATGC+TGG 0.417730 3_2:-83243683 Msa0431210:CDS
ATAAACCTAAAACCAAAGTT+AGG 0.418539 3_2:-83246449 Msa0431210:five_prime_UTR
GCGTAAGCATTAACTACATA+AGG 0.418832 3_2:-83243403 Msa0431210:CDS
AAAACCAAAGTTAGGAGAAC+GGG 0.420668 3_2:-83246441 Msa0431210:five_prime_UTR
TCTCAAGATTCTAGATTGGC+TGG 0.421380 3_2:-83246164 Msa0431210:CDS
TTCACTAGGATTAATATGTC+AGG 0.426068 3_2:-83241998 Msa0431210:three_prime_UTR
GCAGACTTTAACATACCCTT+TGG 0.432131 3_2:-83243555 Msa0431210:CDS
GAAACCCGTTCTCCTAACTT+TGG 0.438276 3_2:+83246437 None:intergenic
TTGTGAAGTGTGATATCATT+TGG 0.440521 3_2:-83242114 Msa0431210:three_prime_UTR
GAATGGCGTATACTCAGAAT+TGG 0.441268 3_2:+83246280 None:intergenic
TAGAACTTTAAACCAGCATA+TGG 0.441645 3_2:+83243671 None:intergenic
TGCATTCTAATTAGGCGTAC+AGG 0.447979 3_2:-83241956 Msa0431210:three_prime_UTR
AAAATACATTTGATGGGCTT+AGG 0.448754 3_2:-83243466 Msa0431210:CDS
CTCTTTCCTTAGAAGTAGAT+GGG 0.450157 3_2:-83246258 Msa0431210:five_prime_UTR
TTAAGAGACAAATGCAGGTT+GGG 0.457586 3_2:-83243526 Msa0431210:CDS
TTAGCAACTTATTCACAGAT+TGG 0.459764 3_2:+83245148 None:intergenic
AAGGGAGGAGAACGGGTTGG+AGG 0.471313 3_2:+83246403 None:intergenic
TATGTTAAAGAGTTAATTGC+TGG 0.472052 3_2:-83246083 Msa0431210:CDS
GGAGTTCGTGGGCTTTATAG+AGG 0.472787 3_2:-83244155 Msa0431210:CDS
CTTCTGTTGCGCCTCTCGAA+CGG 0.475440 3_2:-83246034 Msa0431210:CDS
CAGGTTGGGAGCCTGCAAAA+TGG 0.475469 3_2:-83243512 Msa0431210:CDS
ATTAAGGGAGGAGAACGGGT+TGG 0.483146 3_2:+83246400 None:intergenic
ATTCTGATGCGCCTTTCTTG+TGG 0.483627 3_2:-83243599 Msa0431210:CDS
CATATGAGCGGTATAAAAGT+TGG 0.484712 3_2:-83244954 Msa0431210:CDS
TGTGGTGGTTGCAGAGGTAA+TGG 0.490076 3_2:-83245024 Msa0431210:intron
AATTATCCCATGTTAGGAAC+GGG 0.491656 3_2:-83244922 Msa0431210:CDS
TAAGCCGAAAGCGAAGAAAC+AGG 0.492102 3_2:-83246599 Msa0431210:five_prime_UTR
CCTGATAAGCAAGTTTGGTA+CGG 0.500536 3_2:+83244824 None:intergenic
CAGCAAGAGCTCCACAAGAA+AGG 0.502227 3_2:+83243588 None:intergenic
TATAAAGAAGCTGGAGTTCG+TGG 0.504107 3_2:-83244167 Msa0431210:CDS
CCTGTAGGTCCTGTACATAA+TGG 0.505706 3_2:-83244215 Msa0431210:CDS
GTAATGGAGCTAGTGTTATC+CGG 0.505957 3_2:-83245008 Msa0431210:CDS
CTGATAAGCAAGTTTGGTAC+GGG 0.509585 3_2:+83244825 None:intergenic
CGTAAGCATTAACTACATAA+GGG 0.510324 3_2:-83243402 Msa0431210:intron
TCGAACGGGTTAAGATACTT+TGG 0.511447 3_2:-83246019 Msa0431210:CDS
CATATGGAAGAATTCCAGTA+AGG 0.512544 3_2:+83243687 None:intergenic
TATATTATTTGGGGAATGCA+AGG 0.513028 3_2:-83241898 Msa0431210:three_prime_UTR
CCTTTAATGCCATTATGTAC+AGG 0.518203 3_2:+83244206 None:intergenic
GTCTCTTAACAACATCCAAA+GGG 0.520837 3_2:+83243540 None:intergenic
GTTAAAGAGTTAATTGCTGG+TGG 0.521005 3_2:-83246080 Msa0431210:CDS
CCATTATGTACAGGACCTAC+AGG 0.521264 3_2:+83244215 None:intergenic
CGTGGGCTTTATAGAGGTGT+AGG 0.521949 3_2:-83244149 Msa0431210:intron
AGAAGGACCCGTTCCTAACA+TGG 0.522339 3_2:+83244915 None:intergenic
ACAAGTGCCTATAAAGAAGC+TGG 0.523472 3_2:-83244176 Msa0431210:CDS
ACAAGAAAGGCGCATCAGAA+TGG 0.524845 3_2:+83243601 None:intergenic
ATAAAATGCAAGGCTGCGTA+TGG 0.526789 3_2:+83244979 None:intergenic
CACCACATATGACATGATGA+AGG 0.528465 3_2:-83242339 Msa0431210:CDS
AATAAGTTGCTAAAGCATGA+AGG 0.534112 3_2:-83245138 Msa0431210:CDS
ACTTATATTTACCGAGGGTG+CGG 0.534542 3_2:+83241804 None:intergenic
TGTCTCTTAACAACATCCAA+AGG 0.535374 3_2:+83243539 None:intergenic
ATCTACTGCCACCGCACCCT+CGG 0.535446 3_2:-83241815 Msa0431210:three_prime_UTR
CCAGCTAAAAGATCGATAGA+AGG 0.537017 3_2:+83244898 None:intergenic
TGAAATCGGTGATCCTTCAA+AGG 0.538410 3_2:-83246362 Msa0431210:five_prime_UTR
CATATGACATGATGAAGGCT+TGG 0.542135 3_2:-83242334 Msa0431210:CDS
CTGTAAGTTTATATTATTTG+GGG 0.547194 3_2:-83241907 Msa0431210:three_prime_UTR
GTTAAGAGACAAATGCAGGT+TGG 0.547616 3_2:-83243527 Msa0431210:CDS
GGAAGATTGTTCGAAATCAA+GGG 0.550950 3_2:-83243445 Msa0431210:CDS
ACCAAAGGATGTATCAAAGA+TGG 0.551765 3_2:-83244260 Msa0431210:CDS
AAGGATCACCGATTTCAAAA+CGG 0.555000 3_2:+83246368 None:intergenic
CTACTTCTAAGGAAAGAGAA+TGG 0.559192 3_2:+83246263 None:intergenic
ACGGGTTAAGATACTTTGGC+AGG 0.560352 3_2:-83246015 Msa0431210:intron
GGAAGAATTCCAGTAAGGGT+TGG 0.561588 3_2:+83243692 None:intergenic
CTCATATGTCATAAAATGCA+AGG 0.566747 3_2:+83244969 None:intergenic
AAATGCAATACTATTTCACT+AGG 0.568079 3_2:-83242012 Msa0431210:three_prime_UTR
GTTTAATTAAGGGAGGAGAA+CGG 0.572508 3_2:+83246395 None:intergenic
ATATTATTTGGGGAATGCAA+GGG 0.572688 3_2:-83241897 Msa0431210:three_prime_UTR
AGCCTTCATCATGTCATATG+TGG 0.577415 3_2:+83242337 None:intergenic
CTGACGTGGGAGTTAACGAT+GGG 0.577728 3_2:+83246576 None:intergenic
TTGTTCGAAATCAAGGGTGG+AGG 0.579018 3_2:-83243439 Msa0431210:CDS
TTGGTACGGGCAAGATCTAA+GGG 0.579231 3_2:+83244838 None:intergenic
CAATTATCCCATGTTAGGAA+CGG 0.586032 3_2:-83244923 Msa0431210:CDS
TTTAGCTGGCTCAGCAGCAG+GGG 0.587262 3_2:-83244884 Msa0431210:CDS
ATATGGAAGAATTCCAGTAA+GGG 0.589360 3_2:+83243688 None:intergenic
GTATTGATTAATTATTCACA+AGG 0.592307 3_2:+83242147 None:intergenic
GTGAAACTAATTGCAGCTGA+TGG 0.596426 3_2:+83242359 None:intergenic
TATATTTACCGAGGGTGCGG+TGG 0.596708 3_2:+83241807 None:intergenic
GACATGATGAAGGCTTGGCT+TGG 0.597274 3_2:-83242329 Msa0431210:CDS
ATGGCGTATCTTTCTGACGT+GGG 0.600958 3_2:+83246563 None:intergenic
GCAGTTCATTCTCAACCTGT+AGG 0.601300 3_2:-83244230 Msa0431210:CDS
TCTGACGTGGGAGTTAACGA+TGG 0.601835 3_2:+83246575 None:intergenic
TTATAGGTGGTGGACACCAA+AGG 0.602285 3_2:-83244275 Msa0431210:intron
TAAAACCAAAGTTAGGAGAA+CGG 0.603962 3_2:-83246442 Msa0431210:five_prime_UTR
ATCTACGAGTTACATGCCTA+AGG 0.607911 3_2:+83242054 None:intergenic
ACCAAGATTATGAAATCCAC+CGG 0.612129 3_2:+83245176 None:intergenic
AGTATCTTAACCCGTTCGAG+AGG 0.612939 3_2:+83246023 None:intergenic
TTAGCTGGCTCAGCAGCAGG+GGG 0.614047 3_2:-83244883 Msa0431210:CDS
AGGCTGCGTATGGAACAATC+CGG 0.618289 3_2:+83244989 None:intergenic
GAAGGACCCGTTCCTAACAT+GGG 0.618969 3_2:+83244916 None:intergenic
TATGGCGTATCTTTCTGACG+TGG 0.623231 3_2:+83246562 None:intergenic
TGTTGTTAAGAGACAAATGC+AGG 0.624133 3_2:-83243531 Msa0431210:CDS
CGTCAACTTATATTTACCGA+GGG 0.624382 3_2:+83241799 None:intergenic
TATTGATTAATTATTCACAA+GGG 0.637270 3_2:+83242148 None:intergenic
ATAAAGAAGCTGGAGTTCGT+GGG 0.638356 3_2:-83244166 Msa0431210:CDS
TTTATGATCATGCTGATGCA+TGG 0.638732 3_2:-83241863 Msa0431210:three_prime_UTR
CGGTGGCGTTTAATTAAGGG+AGG 0.647745 3_2:+83246388 None:intergenic
ACGTCAACTTATATTTACCG+AGG 0.667237 3_2:+83241798 None:intergenic
AGATTGTTCGAAATCAAGGG+TGG 0.681478 3_2:-83243442 Msa0431210:CDS
GTATACAAAATATTAATCAG+AGG 0.685631 3_2:-83242173 Msa0431210:three_prime_UTR
TCGGTAAATATAAGTTGACG+TGG 0.716252 3_2:-83241796 Msa0431210:three_prime_UTR
GATCACCGATTTCAAAACGG+TGG 0.734682 3_2:+83246371 None:intergenic
AGGCGTACAGGAGTTTCACG+AGG 0.737566 3_2:-83241944 Msa0431210:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACAAAAATAAAATGA+AGG + chr3_2:83243181-83243200 None:intergenic 10.0%
!!! TATAATTGATTTTCATAAAA+TGG - chr3_2:83245481-83245500 Msa0431210:intron 10.0%
!!! AAATATTTTTACAAAGTAAA+CGG + chr3_2:83245801-83245820 None:intergenic 10.0%
!!! ATTTTATATTTTTACAGACA+AGG - chr3_2:83243201-83243220 Msa0431210:intron 15.0%
!! CAAAGTATATATGTATATAA+TGG + chr3_2:83244022-83244041 None:intergenic 15.0%
!! CATTATATACATATATACTT+TGG - chr3_2:83244020-83244039 Msa0431210:intron 15.0%
!!! GTTTTTGTTTACAATTTTAT+AGG - chr3_2:83244110-83244129 Msa0431210:intron 15.0%
!! TAGTATAAGATTATATGATA+AGG + chr3_2:83245034-83245053 None:intergenic 15.0%
!! TTAAAATTAATGTTAAGATG+TGG - chr3_2:83245192-83245211 Msa0431210:intron 15.0%
!!! AATATTTTTACAAAGTAAAC+GGG + chr3_2:83245800-83245819 None:intergenic 15.0%
!!! TATTGATTAATTATTCACAA+GGG + chr3_2:83246256-83246275 None:intergenic 15.0%
!!! TATATTTTTGCATTCTAATT+AGG - chr3_2:83246437-83246456 Msa0431210:five_prime_UTR 15.0%
!! ACTGTAAGTTTATATTATTT+GGG - chr3_2:83246493-83246512 Msa0431210:five_prime_UTR 15.0%
!!! TTTGTTGATGAATTTGATTA+TGG + chr3_2:83241860-83241879 None:intergenic 20.0%
!!! GTTTTGTAGTAATAGTATTT+GGG + chr3_2:83241883-83241902 None:intergenic 20.0%
!! ATTAACTCTTTAACATAAAC+AGG + chr3_2:83242315-83242334 None:intergenic 20.0%
!! TGAATACATTCATTCATTAT+AGG + chr3_2:83242487-83242506 None:intergenic 20.0%
!! AGATATTTCCAATATAATAC+AGG + chr3_2:83242649-83242668 None:intergenic 20.0%
!! TATAATGTAACATCAAACAA+TGG + chr3_2:83242964-83242983 None:intergenic 20.0%
!! AAATAAAATGAAGGTTAAAG+AGG + chr3_2:83243172-83243191 None:intergenic 20.0%
!! TTCATTACTGTATATGATAT+AGG + chr3_2:83243867-83243886 None:intergenic 20.0%
!! AAATGAAAATCAGAAACAAA+AGG + chr3_2:83243892-83243911 None:intergenic 20.0%
!! ATTAGTTGTGTGTAATAAAT+TGG - chr3_2:83243951-83243970 Msa0431210:intron 20.0%
!! TATATACATATATACTTTGG+TGG - chr3_2:83244023-83244042 Msa0431210:intron 20.0%
!!! TTTGTTTACAATTTTATAGG+TGG - chr3_2:83244113-83244132 Msa0431210:intron 20.0%
!! ATTATGATTGCCAAAAATAA+AGG + chr3_2:83244307-83244326 None:intergenic 20.0%
!!! TTATTTTTGGCAATCATAAT+TGG - chr3_2:83244307-83244326 Msa0431210:intron 20.0%
!! GTCAATATAAATAAAATTCC+AGG + chr3_2:83244446-83244465 None:intergenic 20.0%
!! AATGAATGTATTGAAAACAT+TGG + chr3_2:83244660-83244679 None:intergenic 20.0%
!!! ATCAAATGTATTTTTGTATG+CGG + chr3_2:83244929-83244948 None:intergenic 20.0%
!! CATACAAAAATACATTTGAT+GGG - chr3_2:83244929-83244948 Msa0431210:CDS 20.0%
!! ATAAAATGGCTTGAATAAAT+TGG - chr3_2:83245495-83245514 Msa0431210:intron 20.0%
!!! CATGCTTTTCAAAATTTAAA+TGG + chr3_2:83245755-83245774 None:intergenic 20.0%
!! AAGTTACAATAGAAAATTTC+AGG + chr3_2:83245922-83245941 None:intergenic 20.0%
!! GTATACAAAATATTAATCAG+AGG - chr3_2:83246228-83246247 Msa0431210:five_prime_UTR 20.0%
!!! GTATTGATTAATTATTCACA+AGG + chr3_2:83246257-83246276 None:intergenic 20.0%
!!! TTCATTATTTCTTAATCCTT+AGG - chr3_2:83246331-83246350 Msa0431210:five_prime_UTR 20.0%
!! GACTGTAAGTTTATATTATT+TGG - chr3_2:83246492-83246511 Msa0431210:five_prime_UTR 20.0%
!! CTGTAAGTTTATATTATTTG+GGG - chr3_2:83246494-83246513 Msa0431210:five_prime_UTR 20.0%
!! CGTTTTGTAGTAATAGTATT+TGG + chr3_2:83241884-83241903 None:intergenic 25.0%
! ATAAACCTAAAACCAAAGTT+AGG - chr3_2:83241952-83241971 Msa0431210:three_prime_UTR 25.0%
! TATGTTAAAGAGTTAATTGC+TGG - chr3_2:83242318-83242337 Msa0431210:CDS 25.0%
!! TTGATTTTCATCTGATTGTT+TGG - chr3_2:83242422-83242441 Msa0431210:intron 25.0%
! ACAATACATTGGAATCAATT+CGG + chr3_2:83242461-83242480 None:intergenic 25.0%
! ATCTTCATCCTGTATTATAT+TGG - chr3_2:83242638-83242657 Msa0431210:intron 25.0%
! GTTACATTATACATAATCGA+TGG - chr3_2:83242973-83242992 Msa0431210:intron 25.0%
! AAGGATTGAAATATGGTTAA+AGG + chr3_2:83243612-83243631 None:intergenic 25.0%
! ATGTTTCAAGGATTGAAATA+TGG + chr3_2:83243619-83243638 None:intergenic 25.0%
! TGTATGTATTACATGTTTCA+AGG + chr3_2:83243631-83243650 None:intergenic 25.0%
! TCGTTTGAATTTCAACTAAT+AGG - chr3_2:83243794-83243813 Msa0431210:intron 25.0%
!!! ACCAATACAACCTTTATTTT+TGG - chr3_2:83244294-83244313 Msa0431210:intron 25.0%
! TTCTTGTTGGATAATTATGT+TGG - chr3_2:83244330-83244349 Msa0431210:intron 25.0%
! ATTTCCTAGGAATTCATTTA+GGG + chr3_2:83244533-83244552 None:intergenic 25.0%
! TATTTCCTAGGAATTCATTT+AGG + chr3_2:83244534-83244553 None:intergenic 25.0%
!! AGTATCTTAAGTTATTTCCT+AGG + chr3_2:83244546-83244565 None:intergenic 25.0%
! GCATACAAAAATACATTTGA+TGG - chr3_2:83244928-83244947 Msa0431210:CDS 25.0%
!!! TGTTTCAAGTTTGAGTTTAA+AGG - chr3_2:83245080-83245099 Msa0431210:intron 25.0%
! CAGAATGATAGATTCTTATT+GGG + chr3_2:83245143-83245162 None:intergenic 25.0%
! TCAGAATGATAGATTCTTAT+TGG + chr3_2:83245144-83245163 None:intergenic 25.0%
! TTAAGATTTCGTTACAAGAT+TGG + chr3_2:83245176-83245195 None:intergenic 25.0%
!! TTCTCTTGTTCACTAAATTT+TGG - chr3_2:83245384-83245403 Msa0431210:intron 25.0%
!! TCTCTTGTTCACTAAATTTT+GGG - chr3_2:83245385-83245404 Msa0431210:intron 25.0%
! TCATTAGTCATATGGTTTAA+AGG + chr3_2:83245640-83245659 None:intergenic 25.0%
! AAACCATTAATTTCAATCCT+TGG + chr3_2:83245664-83245683 None:intergenic 25.0%
! TGTCCATATTATATATCCTT+TGG - chr3_2:83245773-83245792 Msa0431210:intron 25.0%
!! AGTTTCTTCAGGATAATTTT+TGG - chr3_2:83246122-83246141 Msa0431210:CDS 25.0%
! AAATGCAATACTATTTCACT+AGG - chr3_2:83246389-83246408 Msa0431210:five_prime_UTR 25.0%
TAAAACCAAAGTTAGGAGAA+CGG - chr3_2:83241959-83241978 Msa0431210:three_prime_UTR 30.0%
!! TGATTTTCTCTGATTCGAAT+TGG - chr3_2:83242085-83242104 Msa0431210:three_prime_UTR 30.0%
TTCTTCTCAAGATTCTAGAT+TGG - chr3_2:83242233-83242252 Msa0431210:three_prime_UTR 30.0%
ATTATAGGCGAACAATACAT+TGG + chr3_2:83242472-83242491 None:intergenic 30.0%
TGGATCATGTAATTCTTTGA+TGG - chr3_2:83242698-83242717 Msa0431210:intron 30.0%
ACTTTGGTAAATGGAATTTC+TGG - chr3_2:83242727-83242746 Msa0431210:intron 30.0%
CTTTGGTAAATGGAATTTCT+GGG - chr3_2:83242728-83242747 Msa0431210:intron 30.0%
TTTGGTAAATGGAATTTCTG+GGG - chr3_2:83242729-83242748 Msa0431210:intron 30.0%
! TTCTGGGGAACATATAATAA+AGG - chr3_2:83242744-83242763 Msa0431210:intron 30.0%
ATTACAAGGATTGCAAAATC+AGG + chr3_2:83242894-83242913 None:intergenic 30.0%
GGAGAAATAAACGTTAAAAC+AGG + chr3_2:83242943-83242962 None:intergenic 30.0%
ACATTATACATAATCGATGG+TGG - chr3_2:83242976-83242995 Msa0431210:intron 30.0%
TCAATATTCCACTAAGCTAT+AGG + chr3_2:83243058-83243077 None:intergenic 30.0%
!! ATATTTTTACAGACAAGGAC+CGG - chr3_2:83243206-83243225 Msa0431210:intron 30.0%
TTAGCAACTTATTCACAGAT+TGG + chr3_2:83243256-83243275 None:intergenic 30.0%
AATAAGTTGCTAAAGCATGA+AGG - chr3_2:83243263-83243282 Msa0431210:intron 30.0%
CTCATATGTCATAAAATGCA+AGG + chr3_2:83243435-83243454 None:intergenic 30.0%
! TGCATTTTATGACATATGAG+CGG - chr3_2:83243435-83243454 Msa0431210:CDS 30.0%
TCCAATATACTATCTTGCAT+TGG - chr3_2:83243696-83243715 Msa0431210:CDS 30.0%
CCAATATACTATCTTGCATT+GGG - chr3_2:83243697-83243716 Msa0431210:CDS 30.0%
TGTGATCAATACCATTTAGT+GGG - chr3_2:83243749-83243768 Msa0431210:intron 30.0%
ATAGTGCTAGAATTGCAATT+TGG + chr3_2:83243933-83243952 None:intergenic 30.0%
! GTTTACAATTTTATAGGTGG+TGG - chr3_2:83244116-83244135 Msa0431210:intron 30.0%
GCCAAAAATAAAGGTTGTAT+TGG + chr3_2:83244298-83244317 None:intergenic 30.0%
! CAATCATAATTGGTTCTTGT+TGG - chr3_2:83244317-83244336 Msa0431210:intron 30.0%
! TATGTTGGAATTCTTGTTTG+TGG - chr3_2:83244345-83244364 Msa0431210:intron 30.0%
ACTTCAAAACAGGAGTTATA+TGG + chr3_2:83244382-83244401 None:intergenic 30.0%
! GTTGTGGATTACTAGATAAA+AGG - chr3_2:83244400-83244419 Msa0431210:intron 30.0%
GAGAGAAAATAATAAGAACC+TGG - chr3_2:83244425-83244444 Msa0431210:intron 30.0%
ATCCTTATAAACAGGGATTA+GGG + chr3_2:83244498-83244517 None:intergenic 30.0%
TATCCTTATAAACAGGGATT+AGG + chr3_2:83244499-83244518 None:intergenic 30.0%
CCAATGTATCCTTATAAACA+GGG + chr3_2:83244505-83244524 None:intergenic 30.0%
ACCAATGTATCCTTATAAAC+AGG + chr3_2:83244506-83244525 None:intergenic 30.0%
! AGCTAAGGTATGCTTTTATT+AGG + chr3_2:83244610-83244629 None:intergenic 30.0%
AATGCAAGAAATGATAGCTA+AGG + chr3_2:83244625-83244644 None:intergenic 30.0%
ATATGGAAGAATTCCAGTAA+GGG + chr3_2:83244716-83244735 None:intergenic 30.0%
TAGAACTTTAAACCAGCATA+TGG + chr3_2:83244733-83244752 None:intergenic 30.0%
!! AAAATACATTTGATGGGCTT+AGG - chr3_2:83244935-83244954 Msa0431210:CDS 30.0%
CGTAAGCATTAACTACATAA+GGG - chr3_2:83244999-83245018 Msa0431210:CDS 30.0%
TGAGTTTAAAGGAGATTTAC+TGG - chr3_2:83245091-83245110 Msa0431210:intron 30.0%
GCACAATATAAGATTCTCAT+TGG - chr3_2:83245214-83245233 Msa0431210:intron 30.0%
! TGGTGTAAAACTGATTTACT+TGG - chr3_2:83245244-83245263 Msa0431210:intron 30.0%
ACCAAAACTTGAAGAGATTA+GGG + chr3_2:83245282-83245301 None:intergenic 30.0%
TACCAAAACTTGAAGAGATT+AGG + chr3_2:83245283-83245302 None:intergenic 30.0%
ATGGCTTGAATAAATTGGAT+TGG - chr3_2:83245500-83245519 Msa0431210:intron 30.0%
TTGATGTCATTGTATTACAG+TGG - chr3_2:83245526-83245545 Msa0431210:intron 30.0%
TATTACAGTGGTAGATAGAT+AGG - chr3_2:83245538-83245557 Msa0431210:intron 30.0%
GAGTGAACATTTCATAGATA+TGG - chr3_2:83245560-83245579 Msa0431210:intron 30.0%
ACTGGATAAATGATGCATAT+TGG - chr3_2:83245721-83245740 Msa0431210:intron 30.0%
GGTCCAAAGGATATATAATA+TGG + chr3_2:83245779-83245798 None:intergenic 30.0%
TCAAGAGTTTCTCATCTTAT+TGG + chr3_2:83245864-83245883 None:intergenic 30.0%
AAGATTCCTAATCATTTCCT+TGG - chr3_2:83245952-83245971 Msa0431210:intron 30.0%
TGTAAAAATGAAGTCAGTCA+CGG + chr3_2:83246174-83246193 None:intergenic 30.0%
!! TGACTGACTTCATTTTTACA+GGG - chr3_2:83246174-83246193 Msa0431210:CDS 30.0%
TTGTGAAGTGTGATATCATT+TGG - chr3_2:83246287-83246306 Msa0431210:five_prime_UTR 30.0%
TTCACTAGGATTAATATGTC+AGG - chr3_2:83246403-83246422 Msa0431210:five_prime_UTR 30.0%
TATATTATTTGGGGAATGCA+AGG - chr3_2:83246503-83246522 Msa0431210:five_prime_UTR 30.0%
ATATTATTTGGGGAATGCAA+GGG - chr3_2:83246504-83246523 Msa0431210:five_prime_UTR 30.0%
!!! GTTCTCCTAACTTTGGTTTT+AGG + chr3_2:83241960-83241979 None:intergenic 35.0%
AAAACCAAAGTTAGGAGAAC+GGG - chr3_2:83241960-83241979 Msa0431210:three_prime_UTR 35.0%
TTTAATTAAGGGAGGAGAAC+GGG + chr3_2:83242008-83242027 None:intergenic 35.0%
GTTTAATTAAGGGAGGAGAA+CGG + chr3_2:83242009-83242028 None:intergenic 35.0%
AAACGGTGGCGTTTAATTAA+GGG + chr3_2:83242019-83242038 None:intergenic 35.0%
AAAACGGTGGCGTTTAATTA+AGG + chr3_2:83242020-83242039 None:intergenic 35.0%
!! AAGGATCACCGATTTCAAAA+CGG + chr3_2:83242036-83242055 None:intergenic 35.0%
CAACACAAAAAAGCCTTTGA+AGG + chr3_2:83242055-83242074 None:intergenic 35.0%
! CTACTTCTAAGGAAAGAGAA+TGG + chr3_2:83242141-83242160 None:intergenic 35.0%
TCTCTTTCCTTAGAAGTAGA+TGG - chr3_2:83242142-83242161 Msa0431210:three_prime_UTR 35.0%
CTCTTTCCTTAGAAGTAGAT+GGG - chr3_2:83242143-83242162 Msa0431210:three_prime_UTR 35.0%
GTTAAAGAGTTAATTGCTGG+TGG - chr3_2:83242321-83242340 Msa0431210:CDS 35.0%
ATATCTCTGAGTTACTTGCT+TGG - chr3_2:83242663-83242682 Msa0431210:intron 35.0%
TTGCTTGGAAATGATCGAAA+TGG - chr3_2:83242678-83242697 Msa0431210:intron 35.0%
!! TCTTTGATGGATTTCGACTT+TGG - chr3_2:83242711-83242730 Msa0431210:intron 35.0%
TGGATTTCGACTTTGGTAAA+TGG - chr3_2:83242718-83242737 Msa0431210:intron 35.0%
GAACATATAATAAAGGAGCG+AGG - chr3_2:83242751-83242770 Msa0431210:intron 35.0%
TAATAAAGGAGCGAGGATTT+AGG - chr3_2:83242758-83242777 Msa0431210:intron 35.0%
GGATTTATGTTGTGATGCTA+TGG - chr3_2:83242813-83242832 Msa0431210:intron 35.0%
!! TTTCTGCTCCTTGATTTGTA+TGG - chr3_2:83242845-83242864 Msa0431210:intron 35.0%
TCGATGTGTGGAAAATTACA+AGG + chr3_2:83242908-83242927 None:intergenic 35.0%
TACAATGCTTGGAGTAAACA+AGG + chr3_2:83243018-83243037 None:intergenic 35.0%
GAACTAATCACTGTTGTTCT+TGG - chr3_2:83243076-83243095 Msa0431210:intron 35.0%
ACCAAGATTATGAAATCCAC+CGG + chr3_2:83243228-83243247 None:intergenic 35.0%
! CTAAAGCATGAAGGTTTTCT+AGG - chr3_2:83243272-83243291 Msa0431210:intron 35.0%
CATATGAGCGGTATAAAAGT+TGG - chr3_2:83243447-83243466 Msa0431210:CDS 35.0%
CTAACATGGGATAATTGTTC+AGG + chr3_2:83243475-83243494 None:intergenic 35.0%
CTGAACAATTATCCCATGTT+AGG - chr3_2:83243473-83243492 Msa0431210:CDS 35.0%
CAATTATCCCATGTTAGGAA+CGG - chr3_2:83243478-83243497 Msa0431210:CDS 35.0%
AATTATCCCATGTTAGGAAC+GGG - chr3_2:83243479-83243498 Msa0431210:CDS 35.0%
CTTTACCTGATAAGCAAGTT+TGG + chr3_2:83243585-83243604 None:intergenic 35.0%
CATGCTACAATGTCTCATAT+AGG + chr3_2:83243659-83243678 None:intergenic 35.0%
CCCAATGCAAGATAGTATAT+TGG + chr3_2:83243700-83243719 None:intergenic 35.0%
GTGTGATCAATACCATTTAG+TGG - chr3_2:83243748-83243767 Msa0431210:intron 35.0%
! ATAGGAGAGCGTATTGAAAA+AGG - chr3_2:83243812-83243831 Msa0431210:intron 35.0%
!! AGCGTATTGAAAAAGGTGTT+GGG - chr3_2:83243819-83243838 Msa0431210:intron 35.0%
TTCCATTGTATGAACGTATG+AGG - chr3_2:83243979-83243998 Msa0431210:intron 35.0%
!! ACATATATACTTTGGTGGTG+AGG - chr3_2:83244028-83244047 Msa0431210:intron 35.0%
!! CATATATACTTTGGTGGTGA+GGG - chr3_2:83244029-83244048 Msa0431210:intron 35.0%
!! ATATATACTTTGGTGGTGAG+GGG - chr3_2:83244030-83244049 Msa0431210:intron 35.0%
ACCAAAGGATGTATCAAAGA+TGG - chr3_2:83244141-83244160 Msa0431210:intron 35.0%
ACCATCTTTGATACATCCTT+TGG + chr3_2:83244145-83244164 None:intergenic 35.0%
CCTTTAATGCCATTATGTAC+AGG + chr3_2:83244198-83244217 None:intergenic 35.0%
CCTGTACATAATGGCATTAA+AGG - chr3_2:83244195-83244214 Msa0431210:CDS 35.0%
! AAGGTTGTATTGGTAGATTC+CGG + chr3_2:83244288-83244307 None:intergenic 35.0%
!!! TAACTCCTGTTTTGAAGTTG+TGG - chr3_2:83244384-83244403 Msa0431210:intron 35.0%
GTAATCCACAACTTCAAAAC+AGG + chr3_2:83244392-83244411 None:intergenic 35.0%
AACCCTAATCCCTGTTTATA+AGG - chr3_2:83244493-83244512 Msa0431210:intron 35.0%
CCCTGTTTATAAGGATACAT+TGG - chr3_2:83244502-83244521 Msa0431210:intron 35.0%
TCAACCCTAAATGAATTCCT+AGG - chr3_2:83244526-83244545 Msa0431210:intron 35.0%
CATATGGAAGAATTCCAGTA+AGG + chr3_2:83244717-83244736 None:intergenic 35.0%
GTCTCTTAACAACATCCAAA+GGG + chr3_2:83244864-83244883 None:intergenic 35.0%
TGTCTCTTAACAACATCCAA+AGG + chr3_2:83244865-83244884 None:intergenic 35.0%
TGTTGTTAAGAGACAAATGC+AGG - chr3_2:83244870-83244889 Msa0431210:CDS 35.0%
TTAAGAGACAAATGCAGGTT+GGG - chr3_2:83244875-83244894 Msa0431210:CDS 35.0%
AGGAAGATTGTTCGAAATCA+AGG - chr3_2:83244955-83244974 Msa0431210:CDS 35.0%
GGAAGATTGTTCGAAATCAA+GGG - chr3_2:83244956-83244975 Msa0431210:CDS 35.0%
GCGTAAGCATTAACTACATA+AGG - chr3_2:83244998-83245017 Msa0431210:CDS 35.0%
AGATTCTCATTGGATGTTAG+TGG - chr3_2:83245224-83245243 Msa0431210:intron 35.0%
CAAAACTTGAAGAGATTAGG+GGG + chr3_2:83245280-83245299 None:intergenic 35.0%
CCAAAACTTGAAGAGATTAG+GGG + chr3_2:83245281-83245300 None:intergenic 35.0%
! GAACCTAGAAAGTGTACTTT+AGG + chr3_2:83245341-83245360 None:intergenic 35.0%
CATAGATATGGCAAGTTAAC+TGG - chr3_2:83245572-83245591 Msa0431210:intron 35.0%
GAGCCAAGGATTGAAATTAA+TGG - chr3_2:83245658-83245677 Msa0431210:intron 35.0%
CTTTCTCAAACTTCAGAAAC+TGG - chr3_2:83245703-83245722 Msa0431210:intron 35.0%
! TGTCTTCCTTATGTTTTGTC+TGG - chr3_2:83245894-83245913 Msa0431210:intron 35.0%
ATTCCTAATCATTTCCTTGG+AGG - chr3_2:83245955-83245974 Msa0431210:intron 35.0%
GAGGCAACTATGTATTAGTT+TGG - chr3_2:83245974-83245993 Msa0431210:intron 35.0%
! ACTATGTATTAGTTTGGCTC+TGG - chr3_2:83245980-83245999 Msa0431210:intron 35.0%
AGAGCAAGGAATGTTAAGAA+TGG + chr3_2:83246008-83246027 None:intergenic 35.0%
!! GTGACTGACTTCATTTTTAC+AGG - chr3_2:83246173-83246192 Msa0431210:CDS 35.0%
! TTTTGTATACGTCGTAAGCA+GGG + chr3_2:83246218-83246237 None:intergenic 35.0%
! ATTTTGTATACGTCGTAAGC+AGG + chr3_2:83246219-83246238 None:intergenic 35.0%
TTTATGATCATGCTGATGCA+TGG - chr3_2:83246538-83246557 Msa0431210:five_prime_UTR 35.0%
ATGCATGGTATTTGCTTGAT+TGG - chr3_2:83246553-83246572 Msa0431210:five_prime_UTR 35.0%
CGTCAACTTATATTTACCGA+GGG + chr3_2:83246605-83246624 None:intergenic 35.0%
ACGTCAACTTATATTTACCG+AGG + chr3_2:83246606-83246625 None:intergenic 35.0%
! TCGGTAAATATAAGTTGACG+TGG - chr3_2:83246605-83246624 Msa0431210:five_prime_UTR 35.0%
!!! AAACGCCACCGTTTTGAAAT+CGG - chr3_2:83242025-83242044 Msa0431210:three_prime_UTR 40.0%
TGAAATCGGTGATCCTTCAA+AGG - chr3_2:83242039-83242058 Msa0431210:three_prime_UTR 40.0%
GAATGGCGTATACTCAGAAT+TGG + chr3_2:83242124-83242143 None:intergenic 40.0%
CGTTATCCCATCTACTTCTA+AGG + chr3_2:83242152-83242171 None:intergenic 40.0%
! GAGTTTTCTGAGCTTCAAAG+TGG - chr3_2:83242171-83242190 Msa0431210:three_prime_UTR 40.0%
GAGCTTCAAAGTGGATAGAT+TGG - chr3_2:83242180-83242199 Msa0431210:three_prime_UTR 40.0%
TCTCAAGATTCTAGATTGGC+TGG - chr3_2:83242237-83242256 Msa0431210:three_prime_UTR 40.0%
! AGATTCTAGATTGGCTGGTT+TGG - chr3_2:83242242-83242261 Msa0431210:three_prime_UTR 40.0%
!! TTAATTGCTGGTGGATTTGC+TGG - chr3_2:83242330-83242349 Msa0431210:CDS 40.0%
!! TCGAACGGGTTAAGATACTT+TGG - chr3_2:83242382-83242401 Msa0431210:intron 40.0%
GATTAGCGTGATAGGTTATG+CGG + chr3_2:83242576-83242595 None:intergenic 40.0%
AGCAAGAGCCATACAAATCA+AGG + chr3_2:83242856-83242875 None:intergenic 40.0%
!! TTGATTTGTATGGCTCTTGC+TGG - chr3_2:83242855-83242874 Msa0431210:intron 40.0%
CTTGGAGTAAACAAGGAACA+AGG + chr3_2:83243011-83243030 None:intergenic 40.0%
CCATACTTGACTACAATGCT+TGG + chr3_2:83243029-83243048 None:intergenic 40.0%
! CCAAGCATTGTAGTCAAGTA+TGG - chr3_2:83243026-83243045 Msa0431210:intron 40.0%
ACTATAGAACGCCGTAAAGA+GGG + chr3_2:83243102-83243121 None:intergenic 40.0%
! ACCGGTGGATTTCATAATCT+TGG - chr3_2:83243224-83243243 Msa0431210:intron 40.0%
CCACATTAGCATAGGTTAAC+AGG + chr3_2:83243362-83243381 None:intergenic 40.0%
CCTGTTAACCTATGCTAATG+TGG - chr3_2:83243359-83243378 Msa0431210:intron 40.0%
GTTAACCTATGCTAATGTGG+TGG - chr3_2:83243362-83243381 Msa0431210:intron 40.0%
! GTAATGGAGCTAGTGTTATC+CGG - chr3_2:83243393-83243412 Msa0431210:intron 40.0%
ATAAAATGCAAGGCTGCGTA+TGG + chr3_2:83243425-83243444 None:intergenic 40.0%
CCAGCTAAAAGATCGATAGA+AGG + chr3_2:83243506-83243525 None:intergenic 40.0%
! CCTTCTATCGATCTTTTAGC+TGG - chr3_2:83243503-83243522 Msa0431210:CDS 40.0%
CTGATAAGCAAGTTTGGTAC+GGG + chr3_2:83243579-83243598 None:intergenic 40.0%
CCTGATAAGCAAGTTTGGTA+CGG + chr3_2:83243580-83243599 None:intergenic 40.0%
!! GGACCTGCTCTAAAATAGTT+AGG - chr3_2:83243770-83243789 Msa0431210:intron 40.0%
!!! GAGCCTAACTATTTTAGAGC+AGG + chr3_2:83243776-83243795 None:intergenic 40.0%
! GAGCGTATTGAAAAAGGTGT+TGG - chr3_2:83243818-83243837 Msa0431210:intron 40.0%
CACCTCATACGTTCATACAA+TGG + chr3_2:83243984-83244003 None:intergenic 40.0%
!! TATATACTTTGGTGGTGAGG+GGG - chr3_2:83244031-83244050 Msa0431210:intron 40.0%
ACAAGTGCCTATAAAGAAGC+TGG - chr3_2:83244225-83244244 Msa0431210:CDS 40.0%
ACGAACTCCAGCTTCTTTAT+AGG + chr3_2:83244235-83244254 None:intergenic 40.0%
TATAAAGAAGCTGGAGTTCG+TGG - chr3_2:83244234-83244253 Msa0431210:CDS 40.0%
ATAAAGAAGCTGGAGTTCGT+GGG - chr3_2:83244235-83244254 Msa0431210:CDS 40.0%
! AGGTTGTATTGGTAGATTCC+GGG + chr3_2:83244287-83244306 None:intergenic 40.0%
TTGGACCTGATGAAAGAGAA+AGG + chr3_2:83244693-83244712 None:intergenic 40.0%
ACTGGAATTCTTCCATATGC+TGG - chr3_2:83244718-83244737 Msa0431210:intron 40.0%
ATGGACTTCTGATGTTCTTC+AGG + chr3_2:83244784-83244803 None:intergenic 40.0%
GCAGACTTTAACATACCCTT+TGG - chr3_2:83244846-83244865 Msa0431210:CDS 40.0%
GTTAAGAGACAAATGCAGGT+TGG - chr3_2:83244874-83244893 Msa0431210:CDS 40.0%
AGATTGTTCGAAATCAAGGG+TGG - chr3_2:83244959-83244978 Msa0431210:CDS 40.0%
!! CCCCTAATCTCTTCAAGTTT+TGG - chr3_2:83245278-83245297 Msa0431210:intron 40.0%
! CCTAGAAAGTGTACTTTAGG+CGG + chr3_2:83245338-83245357 None:intergenic 40.0%
AGTACACTTTCTAGGTTCTG+TGG - chr3_2:83245343-83245362 Msa0431210:intron 40.0%
GTGAACAAGAGAAATGACAC+TGG + chr3_2:83245377-83245396 None:intergenic 40.0%
TAACACACTGCTCTGTTGTT+TGG - chr3_2:83245434-83245453 Msa0431210:intron 40.0%
! AACACACTGCTCTGTTGTTT+GGG - chr3_2:83245435-83245454 Msa0431210:intron 40.0%
TGCAGAGATTCAAGAAAGCT+TGG - chr3_2:83245613-83245632 Msa0431210:intron 40.0%
ACCATATGACTAATGAGCCA+AGG - chr3_2:83245644-83245663 Msa0431210:intron 40.0%
TCCTTGGCTCATTAGTCATA+TGG + chr3_2:83245648-83245667 None:intergenic 40.0%
TACAAAGTAAACGGGTCCAA+AGG + chr3_2:83245792-83245811 None:intergenic 40.0%
CAGGAACCAGACAAAACATA+AGG + chr3_2:83245903-83245922 None:intergenic 40.0%
TTGCCTCCAAGGAAATGATT+AGG + chr3_2:83245961-83245980 None:intergenic 40.0%
CTAATACATAGTTGCCTCCA+AGG + chr3_2:83245972-83245991 None:intergenic 40.0%
AACAATCTGGAAACAGAGCA+AGG + chr3_2:83246022-83246041 None:intergenic 40.0%
GTGAAACTAATTGCAGCTGA+TGG + chr3_2:83246045-83246064 None:intergenic 40.0%
CACCACATATGACATGATGA+AGG - chr3_2:83246062-83246081 Msa0431210:CDS 40.0%
AGCCTTCATCATGTCATATG+TGG + chr3_2:83246067-83246086 None:intergenic 40.0%
CATATGACATGATGAAGGCT+TGG - chr3_2:83246067-83246086 Msa0431210:CDS 40.0%
! ACTGATCGAGACTTTTGTTG+AGG + chr3_2:83246105-83246124 None:intergenic 40.0%
AAGTCTCGATCAGTTTCTTC+AGG - chr3_2:83246111-83246130 Msa0431210:CDS 40.0%
!!! TTTTTGGTGCTCACTTGTGA+TGG - chr3_2:83246138-83246157 Msa0431210:CDS 40.0%
ATCTACGAGTTACATGCCTA+AGG + chr3_2:83246350-83246369 None:intergenic 40.0%
TGCATTCTAATTAGGCGTAC+AGG - chr3_2:83246445-83246464 Msa0431210:five_prime_UTR 40.0%
ACTTATATTTACCGAGGGTG+CGG + chr3_2:83246600-83246619 None:intergenic 40.0%
TAAGCCGAAAGCGAAGAAAC+AGG - chr3_2:83241802-83241821 Msa0431210:three_prime_UTR 45.0%
ATGGCGTATCTTTCTGACGT+GGG + chr3_2:83241841-83241860 None:intergenic 45.0%
TATGGCGTATCTTTCTGACG+TGG + chr3_2:83241842-83241861 None:intergenic 45.0%
GAAACCCGTTCTCCTAACTT+TGG + chr3_2:83241967-83241986 None:intergenic 45.0%
!! GATCACCGATTTCAAAACGG+TGG + chr3_2:83242033-83242052 None:intergenic 45.0%
AGTATCTTAACCCGTTCGAG+AGG + chr3_2:83242381-83242400 None:intergenic 45.0%
! ACGGGTTAAGATACTTTGGC+AGG - chr3_2:83242386-83242405 Msa0431210:intron 45.0%
!! GTTGCGTTGATTAGCGTGAT+AGG + chr3_2:83242584-83242603 None:intergenic 45.0%
CAATAAGCTCACTCGATGTG+TGG + chr3_2:83242920-83242939 None:intergenic 45.0%
GGCTATAGCCTATAGCTTAG+TGG - chr3_2:83243047-83243066 Msa0431210:intron 45.0%
GTTGTTCTTGGCCCTCTTTA+CGG - chr3_2:83243088-83243107 Msa0431210:intron 45.0%
CACTATAGAACGCCGTAAAG+AGG + chr3_2:83243103-83243122 None:intergenic 45.0%
! TTTTTACAGACAAGGACCGG+TGG - chr3_2:83243209-83243228 Msa0431210:intron 45.0%
TGCAACCACCACATTAGCAT+AGG + chr3_2:83243370-83243389 None:intergenic 45.0%
TTGGTACGGGCAAGATCTAA+GGG + chr3_2:83243566-83243585 None:intergenic 45.0%
TTTGGTACGGGCAAGATCTA+AGG + chr3_2:83243567-83243586 None:intergenic 45.0%
! CCGTACCAAACTTGCTTATC+AGG - chr3_2:83243577-83243596 Msa0431210:CDS 45.0%
TTAGAGCAGGTCCCACTAAA+TGG + chr3_2:83243763-83243782 None:intergenic 45.0%
!! TTATAGGTGGTGGACACCAA+AGG - chr3_2:83244126-83244145 Msa0431210:intron 45.0%
GCAGTTCATTCTCAACCTGT+AGG - chr3_2:83244171-83244190 Msa0431210:CDS 45.0%
CCATTATGTACAGGACCTAC+AGG + chr3_2:83244189-83244208 None:intergenic 45.0%
CCTGTAGGTCCTGTACATAA+TGG - chr3_2:83244186-83244205 Msa0431210:CDS 45.0%
AGGTGTAGGTATGTATGTCC+CGG - chr3_2:83244266-83244285 Msa0431210:CDS 45.0%
CCTGATGAAAGAGAAAGGTG+AGG + chr3_2:83244688-83244707 None:intergenic 45.0%
CCTCACCTTTCTCTTTCATC+AGG - chr3_2:83244685-83244704 Msa0431210:intron 45.0%
GGAAGAATTCCAGTAAGGGT+TGG + chr3_2:83244712-83244731 None:intergenic 45.0%
! ACAAGAAAGGCGCATCAGAA+TGG + chr3_2:83244803-83244822 None:intergenic 45.0%
ATTCTGATGCGCCTTTCTTG+TGG - chr3_2:83244802-83244821 Msa0431210:intron 45.0%
GAGCTCTTGCTGGATTGTTT+GGG - chr3_2:83244824-83244843 Msa0431210:intron 45.0%
AGCCTGCAAAATGGAGCTAA+TGG - chr3_2:83244898-83244917 Msa0431210:CDS 45.0%
! CTCCATTAGCTCCATTTTGC+AGG + chr3_2:83244903-83244922 None:intergenic 45.0%
TTGTTCGAAATCAAGGGTGG+AGG - chr3_2:83244962-83244981 Msa0431210:CDS 45.0%
ATTGGGCGCATGTATAAAGC+TGG + chr3_2:83245126-83245145 None:intergenic 45.0%
CCGCCTAAAGTACACTTTCT+AGG - chr3_2:83245335-83245354 Msa0431210:intron 45.0%
TTGCAGCTGATGGAACAATC+TGG + chr3_2:83246035-83246054 None:intergenic 45.0%
! GATCGAGACTTTTGTTGAGG+TGG + chr3_2:83246102-83246121 None:intergenic 45.0%
!! TAAAAAATAAAAAATCATAA+TGG - chr3_2:83242209-83242228 Msa0431210:three_prime_UTR 5.0%
! TGGGCCTGTTTCTTCGCTTT+CGG + chr3_2:83241809-83241828 None:intergenic 50.0%
CTGACGTGGGAGTTAACGAT+GGG + chr3_2:83241828-83241847 None:intergenic 50.0%
TCTGACGTGGGAGTTAACGA+TGG + chr3_2:83241829-83241848 None:intergenic 50.0%
ATTAAGGGAGGAGAACGGGT+TGG + chr3_2:83242004-83242023 None:intergenic 50.0%
CGGTGGCGTTTAATTAAGGG+AGG + chr3_2:83242016-83242035 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+AGG - chr3_2:83242782-83242801 Msa0431210:intron 50.0%
TGCTAATGTGGTGGTTGCAG+AGG - chr3_2:83243371-83243390 Msa0431210:intron 50.0%
TGTGGTGGTTGCAGAGGTAA+TGG - chr3_2:83243377-83243396 Msa0431210:intron 50.0%
AGGCTGCGTATGGAACAATC+CGG + chr3_2:83243415-83243434 None:intergenic 50.0%
GAAGGACCCGTTCCTAACAT+GGG + chr3_2:83243488-83243507 None:intergenic 50.0%
AGAAGGACCCGTTCCTAACA+TGG + chr3_2:83243489-83243508 None:intergenic 50.0%
!! TTTTAGCTGGCTCAGCAGCA+GGG - chr3_2:83243516-83243535 Msa0431210:CDS 50.0%
! GGAGTTCGTGGGCTTTATAG+AGG - chr3_2:83244246-83244265 Msa0431210:CDS 50.0%
! CGTGGGCTTTATAGAGGTGT+AGG - chr3_2:83244252-83244271 Msa0431210:CDS 50.0%
TCATCAGGTCCAACCCTTAC+TGG - chr3_2:83244700-83244719 Msa0431210:intron 50.0%
CAGCAAGAGCTCCACAAGAA+AGG + chr3_2:83244816-83244835 None:intergenic 50.0%
CTTTCTTGTGGAGCTCTTGC+TGG - chr3_2:83244814-83244833 Msa0431210:intron 50.0%
GGAGCTCTTGCTGGATTGTT+TGG - chr3_2:83244823-83244842 Msa0431210:intron 50.0%
GACATGATGAAGGCTTGGCT+TGG - chr3_2:83246072-83246091 Msa0431210:CDS 50.0%
! TATATTTACCGAGGGTGCGG+TGG + chr3_2:83246597-83246616 None:intergenic 50.0%
CTTCTGTTGCGCCTCTCGAA+CGG - chr3_2:83242367-83242386 Msa0431210:CDS 55.0%
TTCTGTTGCGCCTCTCGAAC+GGG - chr3_2:83242368-83242387 Msa0431210:CDS 55.0%
!! CTTTTAGCTGGCTCAGCAGC+AGG - chr3_2:83243515-83243534 Msa0431210:CDS 55.0%
! TTTAGCTGGCTCAGCAGCAG+GGG - chr3_2:83243517-83243536 Msa0431210:CDS 55.0%
!! ATACTTTGGTGGTGAGGGGG+AGG - chr3_2:83244034-83244053 Msa0431210:intron 55.0%
!! TACTTTGGTGGTGAGGGGGA+GGG - chr3_2:83244035-83244054 Msa0431210:intron 55.0%
AGGGGGAGGGATACTTTCTG+AGG - chr3_2:83244048-83244067 Msa0431210:intron 55.0%
GGGGGAGGGATACTTTCTGA+GGG - chr3_2:83244049-83244068 Msa0431210:intron 55.0%
! CAGGTTGGGAGCCTGCAAAA+TGG - chr3_2:83244889-83244908 Msa0431210:CDS 55.0%
AGGCGTACAGGAGTTTCACG+AGG - chr3_2:83246457-83246476 Msa0431210:five_prime_UTR 55.0%
!! AAGGGAGGAGAACGGGTTGG+AGG + chr3_2:83242001-83242020 None:intergenic 60.0%
! TTAGCTGGCTCAGCAGCAGG+GGG - chr3_2:83243518-83243537 Msa0431210:CDS 60.0%
GGGTGGAGGCAGTTGTTTGC+AGG - chr3_2:83244976-83244995 Msa0431210:CDS 60.0%
ATCTACTGCCACCGCACCCT+CGG - chr3_2:83246586-83246605 Msa0431210:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83241787 83246636 83241787 ID=Msa0431210;Name=Msa0431210
chr3_2 mRNA 83241787 83246636 83241787 ID=Msa0431210-mRNA-1;Parent=Msa0431210;Name=Msa0431210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=441|1|1|1|1|1|6|499|343
chr3_2 exon 83241787 83242387 83241787 ID=Msa0431210-mRNA-1:exon:23201;Parent=Msa0431210-mRNA-1
chr3_2 exon 83243403 83243716 83243403 ID=Msa0431210-mRNA-1:exon:23200;Parent=Msa0431210-mRNA-1
chr3_2 exon 83244150 83244291 83244150 ID=Msa0431210-mRNA-1:exon:23199;Parent=Msa0431210-mRNA-1
chr3_2 exon 83244825 83245032 83244825 ID=Msa0431210-mRNA-1:exon:23198;Parent=Msa0431210-mRNA-1
chr3_2 exon 83245120 83245205 83245120 ID=Msa0431210-mRNA-1:exon:23197;Parent=Msa0431210-mRNA-1
chr3_2 exon 83246016 83246636 83246016 ID=Msa0431210-mRNA-1:exon:23196;Parent=Msa0431210-mRNA-1
chr3_2 five_prime_UTR 83246196 83246636 83246196 ID=Msa0431210-mRNA-1:five_prime_utr;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83246016 83246195 83246016 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83245120 83245205 83245120 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83244825 83245032 83244825 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83244150 83244291 83244150 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83243403 83243716 83243403 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 CDS 83242286 83242387 83242286 ID=Msa0431210-mRNA-1:cds;Parent=Msa0431210-mRNA-1
chr3_2 three_prime_UTR 83241787 83242285 83241787 ID=Msa0431210-mRNA-1:three_prime_utr;Parent=Msa0431210-mRNA-1
Gene Sequence

>Msa0431210

ATGGATTCTTCTCAAGATTCTAGATTGGCTGGTTTGGTGAAAAATGCATCTATTAAGAGAGATGAATCTAGTTTCGATCGCGTTCCTGTTTATGTTAAAGAGTTAATTGCTGGTGGATTTGCTGGTGCGCTTGCTAAGACTTCTGTTGCGCCTCTCGAACGGGTTAAGATACTTTGGCAGACAAGGACCGGTGGATTTCATAATCTTGGTGTGTGCCAATCTGTGAATAAGTTGCTAAAGCATGAAGGTTTTCTAGGATTATATAAAGGTAATGGAGCTAGTGTTATCCGGATTGTTCCATACGCAGCCTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATCCTGAACAATTATCCCATGTTAGGAACGGGTCCTTCTATCGATCTTTTAGCTGGCTCAGCAGCAGGGGGAACTTCAGTTTTATGTACATATCCCTTAGATCTTGCCCGTACCAAACTTGCTTATCAGGTGGTGGACACCAAAGGATGTATCAAAGATGGTATTAAAGCAGTTCATTCTCAACCTGTAGGTCCTGTACATAATGGCATTAAAGGTGTACTTACAAGTGCCTATAAAGAAGCTGGAGTTCGTGGGCTTTATAGAGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTATACGTATGAGAAGTTGAAAATGCATGTTCCTGAAGAACATCAGAAGTCCATTCTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGGAGCCTGCAAAATGGAGCTAATGGAGATGCCGCATACAAAAATACATTTGATGGGCTTAGGAAGATTGTTCGAAATCAAGGGTGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTACATAAGGATTGTTCCATCAGCTGCAATTAGTTTCACCACATATGACATGATGAAGGCTTGGCTTGGTGTACCACCTCAACAAAAGTCTCGATCAGTTTCTTCAGGATAA

Protein sequence

>Msa0431210

MDSSQDSRLAGLVKNASIKRDESSFDRVPVYVKELIAGGFAGALAKTSVAPLERVKILWQTRTGGFHNLGVCQSVNKLLKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKAVHSQPVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNGANGDAAYKNTFDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGVPPQQKSRSVSSG*