Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860650 | XP_024640922.1 | 89.720 | 642 | 26 | 3 | 1 | 606 | 1 | 638 | 0.0 | 1074 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860650 | sp|Q04832|HEXP_LEIMA | 35.326 | 184 | 92 | 8 | 287 | 454 | 99 | 271 | 5.43e-15 | 79.0 |
| Msa0860650 | sp|Q04832|HEXP_LEIMA | 33.168 | 202 | 91 | 11 | 286 | 451 | 44 | 237 | 3.77e-11 | 67.4 |
| Msa0860650 | sp|Q04832|HEXP_LEIMA | 33.014 | 209 | 99 | 11 | 286 | 459 | 17 | 219 | 9.34e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860650 | A0A396HXU5 | 89.720 | 642 | 26 | 3 | 1 | 606 | 1 | 638 | 0.0 | 1074 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045490 | Msa0860650 | 0.823618 | 1.257054e-53 | -8.615850e-47 |
| Msa0216240 | Msa0860650 | 0.814121 | 1.809949e-51 | -8.615850e-47 |
| Msa0259270 | Msa0860650 | 0.833830 | 4.257752e-56 | -8.615850e-47 |
| Msa0484840 | Msa0860650 | 0.821879 | 3.193125e-53 | -8.615850e-47 |
| Msa0860650 | Msa0881580 | 0.820817 | 5.613304e-53 | -8.615850e-47 |
| Msa0860650 | Msa1214880 | 0.811492 | 6.814217e-51 | -8.615850e-47 |
| Msa0860650 | Msa1331910 | 0.804139 | 2.492797e-49 | -8.615850e-47 |
| Msa0860650 | Msa1331920 | 0.801890 | 7.273131e-49 | -8.615850e-47 |
| Msa0860650 | Msa1341490 | 0.800506 | 1.396086e-48 | -8.615850e-47 |
| Msa0860650 | Msa1346780 | 0.866851 | 2.106387e-65 | -8.615850e-47 |
| Msa0860650 | Msa1371640 | 0.833755 | 4.443300e-56 | -8.615850e-47 |
| Msa0860650 | Msa1376200 | 0.808929 | 2.432061e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860650 | MtrunA17_Chr5g0439981 | 89.720 | 642 | 26 | 3 | 1 | 606 | 1 | 638 | 0.0 | 1074 |
| Msa0860650 | MtrunA17_Chr3g0119021 | 54.491 | 334 | 135 | 5 | 186 | 519 | 62 | 378 | 1.91e-117 | 361 |
| Msa0860650 | MtrunA17_Chr3g0119021 | 39.815 | 108 | 54 | 4 | 500 | 600 | 451 | 554 | 4.29e-11 | 65.9 |
| Msa0860650 | MtrunA17_Chr3g0080991 | 26.374 | 182 | 99 | 4 | 286 | 452 | 1458 | 1619 | 7.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860650 | AT3G43590.1 | 41.687 | 403 | 163 | 15 | 245 | 590 | 119 | 506 | 7.65e-78 | 257 |
| Msa0860650 | AT5G36240.1 | 48.598 | 107 | 51 | 1 | 351 | 457 | 21 | 123 | 5.62e-27 | 110 |
| Msa0860650 | AT4G36020.1 | 31.073 | 177 | 99 | 6 | 287 | 453 | 134 | 297 | 3.56e-14 | 73.9 |
| Msa0860650 | AT4G36020.3 | 31.073 | 177 | 99 | 6 | 287 | 453 | 134 | 297 | 3.56e-14 | 73.9 |
| Msa0860650 | AT3G43490.1 | 48.649 | 74 | 33 | 3 | 245 | 317 | 107 | 176 | 3.84e-13 | 70.5 |
| Msa0860650 | AT4G36020.2 | 30.286 | 175 | 101 | 5 | 287 | 453 | 102 | 263 | 2.09e-11 | 65.1 |
Find 132 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGTGACCATTCTCTTTC+TGG | 0.047501 | 5_4:-59510005 | None:intergenic |
| AACAAAGCTATATTATAATT+AGG | 0.180762 | 5_4:+59503973 | Msa0860650:five_prime_UTR |
| TGCTTGAGATGCGGGAATTC+TGG | 0.184551 | 5_4:+59508388 | Msa0860650:CDS |
| CCATTCTCTTTCTGGGATCT+TGG | 0.213203 | 5_4:-59509997 | None:intergenic |
| GAGCCACCTGTGTGCTTCTT+TGG | 0.215455 | 5_4:-59508343 | None:intergenic |
| TATAATCTAGACTAGATTTC+TGG | 0.245941 | 5_4:-59510416 | None:intergenic |
| TCAATTCCGAAAGGGATAAT+TGG | 0.257397 | 5_4:+59510169 | Msa0860650:CDS |
| TTATTAGTACATGGTGTTAT+TGG | 0.261119 | 5_4:-59510198 | None:intergenic |
| TACGAGCGACAGTGTTGTTC+TGG | 0.275881 | 5_4:+59506741 | Msa0860650:CDS |
| TCACCAGGTACCACTTTCTC+TGG | 0.278896 | 5_4:-59507348 | None:intergenic |
| CTGGTTGATCCTTCTGAATT+AGG | 0.282005 | 5_4:-59510303 | None:intergenic |
| ATCCTCCATCAGATAATGTT+TGG | 0.299939 | 5_4:+59507544 | Msa0860650:CDS |
| TGCTATGTGTGCAAGAAATT+TGG | 0.301951 | 5_4:+59508635 | Msa0860650:CDS |
| ACAAAGCTATATTATAATTA+GGG | 0.305226 | 5_4:+59503974 | Msa0860650:five_prime_UTR |
| TACGAGCGACAATGTTGTTC+TGG | 0.310663 | 5_4:+59505195 | Msa0860650:CDS |
| ATCATGGGTACTCAGCTTCT+AGG | 0.334635 | 5_4:+59510334 | Msa0860650:CDS |
| CATGTGACCATTCTCTTTCT+GGG | 0.345575 | 5_4:-59510004 | None:intergenic |
| TTGCTACAAATGTGGTCAAA+TGG | 0.365243 | 5_4:+59508706 | Msa0860650:CDS |
| TCCTCCATCAGATAATGTTT+GGG | 0.366216 | 5_4:+59507545 | Msa0860650:CDS |
| TTGTAGCAAGAAAATTCTTT+TGG | 0.368351 | 5_4:-59508692 | None:intergenic |
| TGTAGCTGGATCGGTGTTCT+CGG | 0.372922 | 5_4:-59509696 | None:intergenic |
| AGATCTGCACCTTATGATAA+TGG | 0.377830 | 5_4:+59510033 | Msa0860650:CDS |
| GGTTGGACGGCAGAGCATTC+TGG | 0.390535 | 5_4:+59510132 | Msa0860650:CDS |
| GCTTGAGATGCGGGAATTCT+GGG | 0.391339 | 5_4:+59508389 | Msa0860650:CDS |
| TAACAGAACTTGAGCATTCT+CGG | 0.403761 | 5_4:-59509760 | None:intergenic |
| TAACTTTATTTCATTGAACT+TGG | 0.404125 | 5_4:+59510522 | Msa0860650:three_prime_UTR |
| TCGGTGACCAGCTAGCTTGC+AGG | 0.405953 | 5_4:-59508308 | None:intergenic |
| AGACCTCCAATTATCCCTTT+CGG | 0.409463 | 5_4:-59510175 | None:intergenic |
| GAGAATGCCGAGGTGGAAAC+AGG | 0.410169 | 5_4:+59506709 | Msa0860650:CDS |
| AACTTTATTTCATTGAACTT+GGG | 0.413801 | 5_4:+59510523 | Msa0860650:three_prime_UTR |
| AATTATAATATAGCTTTGTT+CGG | 0.417180 | 5_4:-59503970 | None:intergenic |
| CGCCTCCTCAGGTAGGCAAC+AGG | 0.425438 | 5_4:+59509947 | Msa0860650:intron |
| CTCAAATTGAACTTCAAGAT+GGG | 0.426576 | 5_4:+59504007 | Msa0860650:exon |
| TGTTTGTCTCATCTTCCAAA+TGG | 0.432554 | 5_4:+59510575 | Msa0860650:three_prime_UTR |
| TTATCCCTTTCGGAATTGAA+TGG | 0.437852 | 5_4:-59510165 | None:intergenic |
| AGGAGATTAAGACTAAGAAA+AGG | 0.443967 | 5_4:+59506875 | Msa0860650:CDS |
| TTGAGAGAAGTTACAACAAC+GGG | 0.444049 | 5_4:+59510382 | Msa0860650:CDS |
| GCTCAAGTCAAAGTCCCATT+TGG | 0.445916 | 5_4:-59510590 | None:intergenic |
| CTTGGTTCTGCTGCTTCACC+AGG | 0.448212 | 5_4:-59507363 | None:intergenic |
| TGCTATAACTGCGGCGAAGA+AGG | 0.451788 | 5_4:+59507573 | Msa0860650:CDS |
| CTATTGTTACCATTATCATA+AGG | 0.452102 | 5_4:-59510042 | None:intergenic |
| GCTCAAATTGAACTTCAAGA+TGG | 0.455569 | 5_4:+59504006 | Msa0860650:exon |
| TGCTATAGGTGTGGTGAAGA+AGG | 0.457323 | 5_4:+59509728 | Msa0860650:CDS |
| CTACACCTAGTTCATGCTAT+AGG | 0.459190 | 5_4:+59509714 | Msa0860650:CDS |
| TGTGGTCAAATGGGTCATAT+TGG | 0.459786 | 5_4:+59508716 | Msa0860650:CDS |
| GTTTGTCTCATCTTCCAAAT+GGG | 0.459851 | 5_4:+59510576 | Msa0860650:three_prime_UTR |
| GGGTACTCAGCTTCTAGGTT+TGG | 0.461563 | 5_4:+59510339 | Msa0860650:CDS |
| TGCTACAAATGTGGTCAAAT+GGG | 0.462382 | 5_4:+59508707 | Msa0860650:CDS |
| TAGCATGAACTAGGTGTAGC+TGG | 0.463123 | 5_4:-59509710 | None:intergenic |
| TTGTTAATTAATTACGAGAA+AGG | 0.463620 | 5_4:+59503939 | None:intergenic |
| AATCTCCTCACTATGCAATT+CGG | 0.465805 | 5_4:-59506860 | None:intergenic |
| AATCTCCTCACTATGTGATT+CGG | 0.470113 | 5_4:-59505314 | None:intergenic |
| CTCTCCATTCAATTCCGAAA+GGG | 0.470922 | 5_4:+59510161 | Msa0860650:CDS |
| TTCAACTCACAAGCAGCTTA+CGG | 0.471177 | 5_4:-59507416 | None:intergenic |
| TGACAGTATGCTTGAGATGC+GGG | 0.479083 | 5_4:+59508380 | Msa0860650:CDS |
| TGCTCTACCTGCAAGCTAGC+TGG | 0.479633 | 5_4:+59508301 | Msa0860650:CDS |
| GGCAGTTTGAGTCATAATAA+TGG | 0.485509 | 5_4:+59507651 | Msa0860650:CDS |
| AGAATGCTCAAGTTCTGTTA+AGG | 0.487479 | 5_4:+59509763 | Msa0860650:CDS |
| ACTTTATTTCATTGAACTTG+GGG | 0.488124 | 5_4:+59510524 | Msa0860650:three_prime_UTR |
| ACGAGCGACAGTGTTGTTCT+GGG | 0.489480 | 5_4:+59506742 | Msa0860650:CDS |
| TTGTATTGACACAGCATAAG+TGG | 0.489891 | 5_4:-59508658 | None:intergenic |
| CACAGACAGTAAAGAAGAAG+AGG | 0.492551 | 5_4:+59504212 | Msa0860650:CDS |
| CACCAGGTACCACTTTCTCT+GGG | 0.492731 | 5_4:-59507347 | None:intergenic |
| AACAGAACTTGAGCATTCTC+GGG | 0.493802 | 5_4:-59509759 | None:intergenic |
| TCCACAAAACGGCGCCGTAT+CGG | 0.501713 | 5_4:+59504186 | Msa0860650:CDS |
| TTTGGCAACTCGAGTAGTAA+TGG | 0.502010 | 5_4:+59510357 | Msa0860650:CDS |
| GTAGCTGGATCGGTGTTCTC+GGG | 0.507990 | 5_4:-59509695 | None:intergenic |
| GGAGCATGCTAAAGTGGAAA+CGG | 0.511195 | 5_4:+59505162 | Msa0860650:CDS |
| GAGCATGCTAAAGTGGAAAC+GGG | 0.512109 | 5_4:+59505163 | Msa0860650:CDS |
| TTTACGCGGAATGTTCATGA+TGG | 0.518252 | 5_4:+59510276 | Msa0860650:CDS |
| ACGAGCGACAATGTTGTTCT+GGG | 0.519892 | 5_4:+59505196 | Msa0860650:CDS |
| AAAAGTGGAGCATGCTAAAG+TGG | 0.521401 | 5_4:+59505156 | Msa0860650:CDS |
| CCATGCTTCTTTCAACTGTA+CGG | 0.523223 | 5_4:+59507596 | Msa0860650:CDS |
| CGTGCAATTACTCCACAAAA+CGG | 0.529795 | 5_4:+59504175 | Msa0860650:CDS |
| GTCAAATGGGTCATATTGGT+TGG | 0.532078 | 5_4:+59508720 | Msa0860650:CDS |
| CCAAGATCCCAGAAAGAGAA+TGG | 0.532653 | 5_4:+59509997 | Msa0860650:CDS |
| TCAAATGGGTCATATTGGTT+GGG | 0.533954 | 5_4:+59508721 | Msa0860650:CDS |
| GATTGAAGACCCAGAGAAAG+TGG | 0.538571 | 5_4:+59507338 | Msa0860650:CDS |
| TGATGGAGGATCAAAATACC+TGG | 0.539246 | 5_4:-59507532 | None:intergenic |
| CCACACCTATAGCATGAACT+AGG | 0.541534 | 5_4:-59509719 | None:intergenic |
| CTCACTATGCAATTCGGAAG+CGG | 0.544861 | 5_4:-59506854 | None:intergenic |
| ATTCCGAAAGGGATAATTGG+AGG | 0.544909 | 5_4:+59510172 | Msa0860650:CDS |
| TTGCTCGTATTAACCACCCT+TGG | 0.550857 | 5_4:-59507381 | None:intergenic |
| TCTTTGGACAGTCGCTACTT+CGG | 0.554717 | 5_4:-59508327 | None:intergenic |
| AATCAAAACATAGAGGTGGT+TGG | 0.555688 | 5_4:+59510115 | Msa0860650:CDS |
| GATACAGAGAATAAATGAGA+AGG | 0.556502 | 5_4:-59510484 | None:intergenic |
| TGAACTAGGTGTAGCTGGAT+CGG | 0.558727 | 5_4:-59509705 | None:intergenic |
| GAAGATAGAGCTCGAAGAAG+AGG | 0.560360 | 5_4:+59504051 | Msa0860650:CDS |
| TGCTAAAGTGGAAACGGGCA+TGG | 0.560522 | 5_4:+59505168 | Msa0860650:CDS |
| TACTGTCTGTGTATCCGATA+CGG | 0.561029 | 5_4:-59504200 | None:intergenic |
| TCTATCATCAGCGTGGTCCC+AGG | 0.561332 | 5_4:+59507514 | Msa0860650:intron |
| CCAGAAAGAGAATGGTCACA+TGG | 0.563687 | 5_4:+59510005 | Msa0860650:CDS |
| TTAGTACTATTATTAGTACA+TGG | 0.564178 | 5_4:-59510207 | None:intergenic |
| GTTCCCCAAACATTATCTGA+TGG | 0.574988 | 5_4:-59507549 | None:intergenic |
| AACCATGCCTGTTTCCACCT+CGG | 0.575569 | 5_4:-59506716 | None:intergenic |
| TGATGATGAAGAAGCAAACA+AGG | 0.576755 | 5_4:+59504114 | Msa0860650:CDS |
| GACCCAGAGAAAGTGGTACC+TGG | 0.583600 | 5_4:+59507345 | Msa0860650:CDS |
| TCTCTCCATTCAATTCCGAA+AGG | 0.590436 | 5_4:+59510160 | Msa0860650:CDS |
| GATGGAACTCCTAATTCAGA+AGG | 0.593536 | 5_4:+59510294 | Msa0860650:CDS |
| TGGTGAAGCAGCAGAACCAA+GGG | 0.595481 | 5_4:+59507365 | Msa0860650:CDS |
| CTTTATTTCATTGAACTTGG+GGG | 0.596067 | 5_4:+59510525 | Msa0860650:three_prime_UTR |
| TTTATTTCATTGAACTTGGG+GGG | 0.596254 | 5_4:+59510526 | Msa0860650:three_prime_UTR |
| ATACAGAGAATAAATGAGAA+GGG | 0.599076 | 5_4:-59510483 | None:intergenic |
| CTGGTGAAGCAGCAGAACCA+AGG | 0.600199 | 5_4:+59507364 | Msa0860650:CDS |
| CGCTTCCGAATCACATAGTG+AGG | 0.601770 | 5_4:+59505309 | Msa0860650:CDS |
| AATCAATGCAGGCAAGCTCA+AGG | 0.602295 | 5_4:+59509666 | Msa0860650:intron |
| AAACTGCCACACACAAAACA+AGG | 0.606860 | 5_4:-59507636 | None:intergenic |
| CCCCAAACATTATCTGATGG+AGG | 0.610792 | 5_4:-59507546 | None:intergenic |
| TGCCGAGGTGGAAACAGGCA+TGG | 0.613912 | 5_4:+59506714 | Msa0860650:CDS |
| CGCTTCCGAATTGCATAGTG+AGG | 0.623157 | 5_4:+59506855 | Msa0860650:CDS |
| CTAAAGAAATCAAAACATAG+AGG | 0.627094 | 5_4:+59510108 | Msa0860650:CDS |
| TTGACAGTATGCTTGAGATG+CGG | 0.629516 | 5_4:+59508379 | Msa0860650:CDS |
| TTATTCGCAGGATGATCTCA+AGG | 0.631797 | 5_4:+59508438 | Msa0860650:CDS |
| AAAACATAGAGGTGGTTGGA+CGG | 0.633746 | 5_4:+59510119 | Msa0860650:CDS |
| CCGTACAGTTGAAAGAAGCA+TGG | 0.635614 | 5_4:-59507596 | None:intergenic |
| CCTAGTTCATGCTATAGGTG+TGG | 0.643239 | 5_4:+59509719 | Msa0860650:CDS |
| AAGAAATCAAAACATAGAGG+TGG | 0.643325 | 5_4:+59510111 | Msa0860650:CDS |
| AACTCACAAGCAGCTTACGG+AGG | 0.651992 | 5_4:-59507413 | None:intergenic |
| AGAGAAGTTACAACAACGGG+TGG | 0.653732 | 5_4:+59510385 | Msa0860650:CDS |
| TGGGGAACATGCTATAACTG+CGG | 0.659213 | 5_4:+59507564 | Msa0860650:CDS |
| GTACCCATGATGAAAAGTCC+TGG | 0.660670 | 5_4:-59510322 | None:intergenic |
| GATGGAGGATCAAAATACCT+GGG | 0.663035 | 5_4:-59507531 | None:intergenic |
| CCTCCATCAGATAATGTTTG+GGG | 0.668625 | 5_4:+59507546 | Msa0860650:CDS |
| TGTCCAAAGAAGCACACAGG+TGG | 0.675544 | 5_4:+59508340 | Msa0860650:CDS |
| CAGAAAGAGAATGGTCACAT+GGG | 0.677130 | 5_4:+59510006 | Msa0860650:CDS |
| TGAAGCAGCAGAACCAAGGG+TGG | 0.678993 | 5_4:+59507368 | Msa0860650:CDS |
| AAAAGTGGAGAATGCCGAGG+TGG | 0.683836 | 5_4:+59506702 | Msa0860650:CDS |
| CTAATTCAGAAGGATCAACC+AGG | 0.685700 | 5_4:+59510304 | Msa0860650:CDS |
| TTTGAGAGAAGTTACAACAA+CGG | 0.685995 | 5_4:+59510381 | Msa0860650:CDS |
| GACTGTCCAAAGAAGCACAC+AGG | 0.690399 | 5_4:+59508337 | Msa0860650:CDS |
| CAATGCAGGCAAGCTCAAGG+TGG | 0.698321 | 5_4:+59509669 | Msa0860650:intron |
| GTAACAATAGTAAAATGACA+AGG | 0.737792 | 5_4:+59510055 | Msa0860650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTGTTTTCAA+TGG | + | chr5_4:59504382-59504401 | Msa0860650:intron | 10.0% |
| !!! | TTTTTTTTTTTGTTTTCAAT+GGG | + | chr5_4:59504383-59504402 | Msa0860650:intron | 10.0% |
| !! | AAAATTCTAAATTAATTAGT+AGG | + | chr5_4:59509312-59509331 | Msa0860650:intron | 10.0% |
| !! | CTAATAATAATAGATAATAA+TGG | - | chr5_4:59509841-59509860 | None:intergenic | 10.0% |
| !!! | AATTATAATATAGCTTTGTT+CGG | - | chr5_4:59503973-59503992 | None:intergenic | 15.0% |
| !! | AACAAAGCTATATTATAATT+AGG | + | chr5_4:59503973-59503992 | Msa0860650:five_prime_UTR | 15.0% |
| !! | ACAAAGCTATATTATAATTA+GGG | + | chr5_4:59503974-59503993 | Msa0860650:five_prime_UTR | 15.0% |
| !!! | ATAATTAGTTTAAGAACATT+TGG | + | chr5_4:59505030-59505049 | Msa0860650:intron | 15.0% |
| !!! | TAATTAGTTTAAGAACATTT+GGG | + | chr5_4:59505031-59505050 | Msa0860650:intron | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr5_4:59505714-59505733 | Msa0860650:intron | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr5_4:59505715-59505734 | Msa0860650:intron | 15.0% |
| !! | TTAAATTGTTTATTCAAACA+AGG | + | chr5_4:59506446-59506465 | Msa0860650:intron | 15.0% |
| !!! | CAATTTTTCATTGAAAATAT+GGG | - | chr5_4:59507008-59507027 | None:intergenic | 15.0% |
| !! | TTTAGTTGTCTTAAAATTAT+TGG | - | chr5_4:59507167-59507186 | None:intergenic | 15.0% |
| !!! | CAAAATTAGTTTAAGAATTT+CGG | + | chr5_4:59507213-59507232 | Msa0860650:intron | 15.0% |
| !! | CAATATTAAAAATAAATCAC+AGG | - | chr5_4:59508768-59508787 | None:intergenic | 15.0% |
| !!! | TCAATTCTATTTTAATACTA+AGG | - | chr5_4:59508922-59508941 | None:intergenic | 15.0% |
| !!! | TATTTATCTTTTCTGTTATT+GGG | + | chr5_4:59509127-59509146 | Msa0860650:intron | 15.0% |
| !! | CTAATTAATACAAAAACAAT+GGG | - | chr5_4:59509426-59509445 | None:intergenic | 15.0% |
| !! | TCTAATTAATACAAAAACAA+TGG | - | chr5_4:59509427-59509446 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGTATTAATTAGA+AGG | + | chr5_4:59509427-59509446 | Msa0860650:intron | 15.0% |
| !!! | TGTTTTTGTATTAATTAGAA+GGG | + | chr5_4:59509428-59509447 | Msa0860650:intron | 15.0% |
| !!! | TTTCTATAAATGAAGTTTTA+GGG | - | chr5_4:59510555-59510574 | None:intergenic | 15.0% |
| !!! | ATTTCTATAAATGAAGTTTT+AGG | - | chr5_4:59510556-59510575 | None:intergenic | 15.0% |
| !!! | TTTTTTTCCCAATTTTTCAA+TGG | + | chr5_4:59504320-59504339 | Msa0860650:intron | 20.0% |
| !! | CAAATTTCCATTGAAAAATT+GGG | - | chr5_4:59504330-59504349 | None:intergenic | 20.0% |
| !!! | CAATTTTTCAATGGAAATTT+GGG | + | chr5_4:59504329-59504348 | Msa0860650:intron | 20.0% |
| !!! | AATTTTTCAATGGAAATTTG+GGG | + | chr5_4:59504330-59504349 | Msa0860650:intron | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+AGG | + | chr5_4:59504896-59504915 | Msa0860650:intron | 20.0% |
| !! | TATCAATCTTATATCCTAAT+AGG | - | chr5_4:59504922-59504941 | None:intergenic | 20.0% |
| !! | TTAGTCAGATTAACATTAAA+TGG | + | chr5_4:59504956-59504975 | Msa0860650:intron | 20.0% |
| !! | ATTAACCCTTGAAAATATAA+GGG | - | chr5_4:59505461-59505480 | None:intergenic | 20.0% |
| !! | AATTAACCCTTGAAAATATA+AGG | - | chr5_4:59505462-59505481 | None:intergenic | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr5_4:59505496-59505515 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr5_4:59505497-59505516 | None:intergenic | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr5_4:59505684-59505703 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr5_4:59505683-59505702 | None:intergenic | 20.0% |
| !!! | ATGTTGATGGAAAATTTTAT+AGG | + | chr5_4:59505654-59505673 | Msa0860650:intron | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+GGG | + | chr5_4:59505655-59505674 | Msa0860650:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr5_4:59505683-59505702 | Msa0860650:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr5_4:59505684-59505703 | Msa0860650:intron | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr5_4:59505742-59505761 | None:intergenic | 20.0% |
| !!! | TTAATTAACCCTATTTTCAA+TGG | + | chr5_4:59505747-59505766 | Msa0860650:intron | 20.0% |
| !!! | ATTCTGTGTTATGTTTTTTA+TGG | + | chr5_4:59505813-59505832 | Msa0860650:intron | 20.0% |
| !! | ATTAATCATTAGAGCAATTT+GGG | - | chr5_4:59505887-59505906 | None:intergenic | 20.0% |
| !! | AATTAATCATTAGAGCAATT+TGG | - | chr5_4:59505888-59505907 | None:intergenic | 20.0% |
| !!! | TTAATTAGTTTCTGTTTAGT+TGG | + | chr5_4:59505902-59505921 | Msa0860650:intron | 20.0% |
| !! | ATGATTTCATAAACTCAATA+TGG | - | chr5_4:59506191-59506210 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+AGG | + | chr5_4:59504896-59504915 | Msa0860650:intron | 20.0% |
| !! | TAGTCAGATTTAACATTAAA+TGG | + | chr5_4:59506507-59506526 | Msa0860650:intron | 20.0% |
| !!! | AAATGTTCTTAAACTACTTT+TGG | - | chr5_4:59506574-59506593 | None:intergenic | 20.0% |
| !! | TATAGTTGAAGAAAAAGAAA+AGG | + | chr5_4:59506651-59506670 | Msa0860650:CDS | 20.0% |
| !!! | CCAATTTTTCATTGAAAATA+TGG | - | chr5_4:59507009-59507028 | None:intergenic | 20.0% |
| !!! | CCATATTTTCAATGAAAAAT+TGG | + | chr5_4:59507006-59507025 | Msa0860650:intron | 20.0% |
| !!! | TTCTATGTTTGTGTTTTTTA+TGG | + | chr5_4:59507055-59507074 | Msa0860650:intron | 20.0% |
| !!! | CGAAATTCTTAAACTAATTT+TGG | - | chr5_4:59507215-59507234 | None:intergenic | 20.0% |
| !!! | TTTTGGTATTTTTGAAACAA+TGG | + | chr5_4:59507251-59507270 | Msa0860650:intron | 20.0% |
| !!! | GTATTCTTTTTTCTGTTTAA+AGG | + | chr5_4:59507710-59507729 | Msa0860650:intron | 20.0% |
| !! | TCAAACTTATTATACATAGT+CGG | - | chr5_4:59507756-59507775 | None:intergenic | 20.0% |
| !!! | ATCAACATTGAAGATTTTTT+TGG | + | chr5_4:59508110-59508129 | Msa0860650:intron | 20.0% |
| !!! | AATTGGTAAGTTTCATTTTA+TGG | - | chr5_4:59508150-59508169 | None:intergenic | 20.0% |
| !! | ATATGACAAAGTCTATTATA+TGG | - | chr5_4:59508192-59508211 | None:intergenic | 20.0% |
| !! | TATAATAGACTTTGTCATAT+TGG | + | chr5_4:59508192-59508211 | Msa0860650:intron | 20.0% |
| !! | GCTTAAAAATGTTTATATCA+TGG | + | chr5_4:59508224-59508243 | Msa0860650:intron | 20.0% |
| !!! | ATTAATGGATAAATCAGATA+TGG | + | chr5_4:59508549-59508568 | Msa0860650:intron | 20.0% |
| !! | AGGCAAAAAAATGAAATTAA+TGG | - | chr5_4:59508843-59508862 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGATATGTCTATA+AGG | + | chr5_4:59509085-59509104 | Msa0860650:intron | 20.0% |
| !!! | CTATTTATCTTTTCTGTTAT+TGG | + | chr5_4:59509126-59509145 | Msa0860650:intron | 20.0% |
| !!! | GTTTTTGTATTAATTAGAAG+GGG | + | chr5_4:59509429-59509448 | Msa0860650:intron | 20.0% |
| !! | TAATAGATAATAATGGCAAA+CGG | - | chr5_4:59509834-59509853 | None:intergenic | 20.0% |
| !! | TTAGTACTATTATTAGTACA+TGG | - | chr5_4:59510210-59510229 | None:intergenic | 20.0% |
| !!! | AAAAACCATTTTTACAATAG+TGG | + | chr5_4:59510228-59510247 | Msa0860650:CDS | 20.0% |
| !!! | TAACTTTATTTCATTGAACT+TGG | + | chr5_4:59510522-59510541 | Msa0860650:three_prime_UTR | 20.0% |
| !!! | AACTTTATTTCATTGAACTT+GGG | + | chr5_4:59510523-59510542 | Msa0860650:three_prime_UTR | 20.0% |
| ! | CCAAATTTCCATTGAAAAAT+TGG | - | chr5_4:59504331-59504350 | None:intergenic | 25.0% |
| !!! | CCAATTTTTCAATGGAAATT+TGG | + | chr5_4:59504328-59504347 | Msa0860650:intron | 25.0% |
| !! | TTGTTTTCAATGGGATTTTT+TGG | + | chr5_4:59504392-59504411 | Msa0860650:intron | 25.0% |
| ! | TTAATCTGACTAACCAATTT+AGG | - | chr5_4:59504949-59504968 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTTGAAACTAACT+TGG | + | chr5_4:59505063-59505082 | Msa0860650:intron | 25.0% |
| ! | TATAGCTGAAGAAAAAGAAA+AGG | + | chr5_4:59505105-59505124 | Msa0860650:CDS | 25.0% |
| ! | TTAACCCTTGAAAATATAAG+GGG | - | chr5_4:59505460-59505479 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr5_4:59505560-59505579 | Msa0860650:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr5_4:59505561-59505580 | Msa0860650:intron | 25.0% |
| !! | ATGCTGATGGAAAATTTTAT+AGG | + | chr5_4:59505623-59505642 | Msa0860650:intron | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+GGG | + | chr5_4:59505624-59505643 | Msa0860650:intron | 25.0% |
| !! | CCAATTTTCCATTGAAAATA+GGG | - | chr5_4:59505758-59505777 | None:intergenic | 25.0% |
| !! | CCTATTTTCAATGGAAAATT+GGG | + | chr5_4:59505756-59505775 | Msa0860650:intron | 25.0% |
| ! | GCTTATGAAAATAAGCAAAA+AGG | - | chr5_4:59506027-59506046 | None:intergenic | 25.0% |
| !! | ATTTATCGTATCTTTTGTCA+TGG | + | chr5_4:59506099-59506118 | Msa0860650:intron | 25.0% |
| ! | ATTAAATTGTTTATCCAGAC+AGG | + | chr5_4:59506164-59506183 | Msa0860650:intron | 25.0% |
| ! | TTAAATTGTTTATCCAGACA+GGG | + | chr5_4:59506165-59506184 | Msa0860650:intron | 25.0% |
| ! | TTTCAATCATATATCCTACT+AGG | - | chr5_4:59506371-59506390 | None:intergenic | 25.0% |
| ! | TAATTAAGCTTTGCTTATGT+AGG | + | chr5_4:59506624-59506643 | Msa0860650:intron | 25.0% |
| ! | TTTCATTGAAAATATGGGTA+GGG | - | chr5_4:59507003-59507022 | None:intergenic | 25.0% |
| !! | TTTTCATTGAAAATATGGGT+AGG | - | chr5_4:59507004-59507023 | None:intergenic | 25.0% |
| ! | CAAACATAGAAAAACTTTCT+TGG | - | chr5_4:59507046-59507065 | None:intergenic | 25.0% |
| ! | TAAAATTATTGGAGCAATCT+GGG | - | chr5_4:59507156-59507175 | None:intergenic | 25.0% |
| ! | TTAAAATTATTGGAGCAATC+TGG | - | chr5_4:59507157-59507176 | None:intergenic | 25.0% |
| !!! | AACAATGGATTGTCTTATAT+AGG | + | chr5_4:59507266-59507285 | Msa0860650:intron | 25.0% |
| !! | CATTTTCAATATCACATTTC+AGG | - | chr5_4:59507450-59507469 | None:intergenic | 25.0% |
| ! | CTGAAATGTGATATTGAAAA+TGG | + | chr5_4:59507448-59507467 | Msa0860650:intron | 25.0% |
| ! | TAATGGCAAAAAATGCATTA+TGG | + | chr5_4:59507668-59507687 | Msa0860650:CDS | 25.0% |
| ! | AAAATGCATTATGGTATGTT+TGG | + | chr5_4:59507677-59507696 | Msa0860650:intron | 25.0% |
| !!! | CGTTTATTTTTATTAATCCG+CGG | + | chr5_4:59507790-59507809 | Msa0860650:intron | 25.0% |
| !!! | GTTTATTTTTATTAATCCGC+GGG | + | chr5_4:59507791-59507810 | Msa0860650:intron | 25.0% |
| ! | AGTTTGATATGTTGTAATAG+CGG | + | chr5_4:59507908-59507927 | Msa0860650:intron | 25.0% |
| ! | AAAATCTTCAATGTTGATCA+TGG | - | chr5_4:59508108-59508127 | None:intergenic | 25.0% |
| !! | ATTTCCTTTTATCTTCTGTA+GGG | + | chr5_4:59508271-59508290 | Msa0860650:intron | 25.0% |
| !! | ATTTTCCTCCTTTTCTTTTA+TGG | + | chr5_4:59508487-59508506 | Msa0860650:intron | 25.0% |
| !! | TTTTCCTCCTTTTCTTTTAT+GGG | + | chr5_4:59508488-59508507 | Msa0860650:intron | 25.0% |
| ! | ATAGTTTCCCATAAAAGAAA+AGG | - | chr5_4:59508498-59508517 | None:intergenic | 25.0% |
| ! | TGAGTTCACTTAGTTATTAA+TGG | + | chr5_4:59508534-59508553 | Msa0860650:intron | 25.0% |
| ! | GTATTTCCTAGTTAAACAAA+GGG | - | chr5_4:59508613-59508632 | None:intergenic | 25.0% |
| ! | TGTATTTCCTAGTTAAACAA+AGG | - | chr5_4:59508614-59508633 | None:intergenic | 25.0% |
| !! | TTGTAGCAAGAAAATTCTTT+TGG | - | chr5_4:59508695-59508714 | None:intergenic | 25.0% |
| !! | TTTTCTTTCCAAAAGTAGTT+AGG | + | chr5_4:59508808-59508827 | Msa0860650:intron | 25.0% |
| !!! | AATTTCATTTTTTTGCCTAC+TGG | + | chr5_4:59508845-59508864 | Msa0860650:intron | 25.0% |
| !!! | ATTTCATTTTTTTGCCTACT+GGG | + | chr5_4:59508846-59508865 | Msa0860650:intron | 25.0% |
| ! | AAATCAAATCAAATTACCCT+TGG | - | chr5_4:59509196-59509215 | None:intergenic | 25.0% |
| ! | TTAATATGAGAAAAGATGAG+AGG | - | chr5_4:59509227-59509246 | None:intergenic | 25.0% |
| !! | TCTCATCTTTTCTCATATTA+AGG | + | chr5_4:59509226-59509245 | Msa0860650:intron | 25.0% |
| ! | AATTAGTAGGAGATGAATTT+AGG | + | chr5_4:59509325-59509344 | Msa0860650:intron | 25.0% |
| ! | ATTAGTAGGAGATGAATTTA+GGG | + | chr5_4:59509326-59509345 | Msa0860650:intron | 25.0% |
| !! | CAAATTTGAGACAAGAAAAA+AGG | - | chr5_4:59509369-59509388 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTTGTCTCAAATT+TGG | + | chr5_4:59509367-59509386 | Msa0860650:intron | 25.0% |
| ! | CTATTGTTACCATTATCATA+AGG | - | chr5_4:59510045-59510064 | None:intergenic | 25.0% |
| ! | GTAACAATAGTAAAATGACA+AGG | + | chr5_4:59510055-59510074 | Msa0860650:CDS | 25.0% |
| ! | CTAAAGAAATCAAAACATAG+AGG | + | chr5_4:59510108-59510127 | Msa0860650:CDS | 25.0% |
| !!! | TTATTAGTACATGGTGTTAT+TGG | - | chr5_4:59510201-59510220 | None:intergenic | 25.0% |
| ! | TATAATCTAGACTAGATTTC+TGG | - | chr5_4:59510419-59510438 | None:intergenic | 25.0% |
| ! | ATACAGAGAATAAATGAGAA+GGG | - | chr5_4:59510486-59510505 | None:intergenic | 25.0% |
| !! | ACTTTATTTCATTGAACTTG+GGG | + | chr5_4:59510524-59510543 | Msa0860650:three_prime_UTR | 25.0% |
| CTCAAATTGAACTTCAAGAT+GGG | + | chr5_4:59504007-59504026 | Msa0860650:exon | 30.0% | |
| !!! | TGGAAATTTGGGGTTTTTTT+TGG | + | chr5_4:59504340-59504359 | Msa0860650:intron | 30.0% |
| !!! | ACTTGTGAATTGTTTTAGAG+CGG | + | chr5_4:59504448-59504467 | Msa0860650:intron | 30.0% |
| GTTTACTTGAGCTTAATTAG+TGG | + | chr5_4:59504480-59504499 | Msa0860650:intron | 30.0% | |
| TAAGAACTTGTAAGAGTGAT+TGG | + | chr5_4:59504505-59504524 | Msa0860650:intron | 30.0% | |
| AAGAACTTGTAAGAGTGATT+GGG | + | chr5_4:59504506-59504525 | Msa0860650:intron | 30.0% | |
| !! | CTTATTTTCATAAGTTCTCG+AGG | + | chr5_4:59504581-59504600 | Msa0860650:intron | 30.0% |
| !! | ATTAAGTTGTTTCTCCAAAC+AGG | + | chr5_4:59504712-59504731 | Msa0860650:intron | 30.0% |
| !! | TTAAGTTGTTTCTCCAAACA+GGG | + | chr5_4:59504713-59504732 | Msa0860650:intron | 30.0% |
| TAAGCTATCATTGAAAGCTA+AGG | - | chr5_4:59504798-59504817 | None:intergenic | 30.0% | |
| TTATTCAAACAAGGCCTATT+AGG | + | chr5_4:59504905-59504924 | Msa0860650:intron | 30.0% | |
| AGATTGATACACACCTAAAT+TGG | + | chr5_4:59504933-59504952 | Msa0860650:intron | 30.0% | |
| ! | TTTACCCCCTTATATTTTCA+AGG | + | chr5_4:59505452-59505471 | Msa0860650:intron | 30.0% |
| ! | TTACCCCCTTATATTTTCAA+GGG | + | chr5_4:59505453-59505472 | Msa0860650:intron | 30.0% |
| TAACCCTTGAAAATATAAGG+GGG | - | chr5_4:59505459-59505478 | None:intergenic | 30.0% | |
| TTTAGTCCCTAAAATGCTTA+AGG | - | chr5_4:59505570-59505589 | None:intergenic | 30.0% | |
| ! | TGCTGACGGAAAATTTTTAT+AGG | + | chr5_4:59505592-59505611 | Msa0860650:intron | 30.0% |
| ! | GCTGACGGAAAATTTTTATA+GGG | + | chr5_4:59505593-59505612 | Msa0860650:intron | 30.0% |
| ATAGGGACTAAAAATGTTGA+TGG | + | chr5_4:59505641-59505660 | Msa0860650:intron | 30.0% | |
| ! | CCCTATTTTCAATGGAAAAT+TGG | + | chr5_4:59505755-59505774 | Msa0860650:intron | 30.0% |
| ! | CCCAATTTTCCATTGAAAAT+AGG | - | chr5_4:59505759-59505778 | None:intergenic | 30.0% |
| TTACTCTCTAAACACTACAA+GGG | + | chr5_4:59505846-59505865 | Msa0860650:intron | 30.0% | |
| TAGTTTCTGTTTAGTTGGAT+TGG | + | chr5_4:59505907-59505926 | Msa0860650:intron | 30.0% | |
| !!! | TTTTTTTCGAGCTTATCTAG+TGG | + | chr5_4:59505931-59505950 | Msa0860650:intron | 30.0% |
| !! | CTTATTTTCATAAGCTCTCT+AGG | + | chr5_4:59506032-59506051 | Msa0860650:intron | 30.0% |
| AATAAGTTATCTCCCAGTTT+AGG | - | chr5_4:59506398-59506417 | None:intergenic | 30.0% | |
| TAAATCTGACTAACCAAGTT+AGG | - | chr5_4:59506499-59506518 | None:intergenic | 30.0% | |
| ATGCTATGCTAACATTGTAT+TGG | + | chr5_4:59506813-59506832 | Msa0860650:intron | 30.0% | |
| AGGAGATTAAGACTAAGAAA+AGG | + | chr5_4:59506875-59506894 | Msa0860650:CDS | 30.0% | |
| TTCATTGAAAATATGGGTAG+GGG | - | chr5_4:59507002-59507021 | None:intergenic | 30.0% | |
| AATGAAAAATTGGCCATTCT+TGG | + | chr5_4:59507016-59507035 | Msa0860650:intron | 30.0% | |
| TCTTCTTCAAAAAAGAGGAT+AGG | - | chr5_4:59507090-59507109 | None:intergenic | 30.0% | |
| !!! | GGTTGTGTTTTTTCACTTTT+TGG | + | chr5_4:59507234-59507253 | Msa0860650:intron | 30.0% |
| AGAAGAAGAAGAAGAAGAAA+AGG | + | chr5_4:59507302-59507321 | Msa0860650:CDS | 30.0% | |
| TTCAATGTTGATCATGGAAA+AGG | - | chr5_4:59508102-59508121 | None:intergenic | 30.0% | |
| ATGAAACTTACCAATTTCAG+TGG | + | chr5_4:59508154-59508173 | Msa0860650:intron | 30.0% | |
| GAAATTCATTCCACTGAAAT+TGG | - | chr5_4:59508167-59508186 | None:intergenic | 30.0% | |
| ! | GATTTCCTTTTATCTTCTGT+AGG | + | chr5_4:59508270-59508289 | Msa0860650:intron | 30.0% |
| TTTATGGGAAACTATGCTAA+AGG | + | chr5_4:59508503-59508522 | Msa0860650:intron | 30.0% | |
| ! | GAAACTATGCTAAAGGTTTT+TGG | + | chr5_4:59508510-59508529 | Msa0860650:intron | 30.0% |
| ! | TGATTTCCCTTTGTTTAACT+AGG | + | chr5_4:59508604-59508623 | Msa0860650:intron | 30.0% |
| ! | GAATTTTCTTGCTACAAATG+TGG | + | chr5_4:59508698-59508717 | Msa0860650:CDS | 30.0% |
| ! | AAAGCAAACCTAACTACTTT+TGG | - | chr5_4:59508819-59508838 | None:intergenic | 30.0% |
| ATGTTCAAGGTTGAAAAATG+AGG | + | chr5_4:59508976-59508995 | Msa0860650:intron | 30.0% | |
| CATATTAAGGTTAACTTCCA+AGG | + | chr5_4:59509239-59509258 | Msa0860650:intron | 30.0% | |
| TTAGTAGGAGATGAATTTAG+GGG | + | chr5_4:59509327-59509346 | Msa0860650:intron | 30.0% | |
| ! | TCTCAAATTTGGTTTCAGAT+GGG | + | chr5_4:59509378-59509397 | Msa0860650:intron | 30.0% |
| CACATTACAATAACCTCTAA+AGG | - | chr5_4:59509559-59509578 | None:intergenic | 30.0% | |
| ! | CTTTAGAGGTTATTGTAATG+TGG | + | chr5_4:59509557-59509576 | Msa0860650:intron | 30.0% |
| GTGAAGAGATAGATATTATG+TGG | - | chr5_4:59509880-59509899 | None:intergenic | 30.0% | |
| AAGAAATCAAAACATAGAGG+TGG | + | chr5_4:59510111-59510130 | Msa0860650:CDS | 30.0% | |
| GACTACCACTATTGTAAAAA+TGG | - | chr5_4:59510236-59510255 | None:intergenic | 30.0% | |
| !!! | TCAGTTCTAAATCTTTTACG+CGG | + | chr5_4:59510262-59510281 | Msa0860650:CDS | 30.0% |
| TTTGAGAGAAGTTACAACAA+CGG | + | chr5_4:59510381-59510400 | Msa0860650:CDS | 30.0% | |
| GATACAGAGAATAAATGAGA+AGG | - | chr5_4:59510487-59510506 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATTGAACTTGG+GGG | + | chr5_4:59510525-59510544 | Msa0860650:three_prime_UTR | 30.0% |
| TTTATTTCATTGAACTTGGG+GGG | + | chr5_4:59510526-59510545 | Msa0860650:three_prime_UTR | 30.0% | |
| GCTCAAATTGAACTTCAAGA+TGG | + | chr5_4:59504006-59504025 | Msa0860650:exon | 35.0% | |
| ! | TGATGATGAAGAAGCAAACA+AGG | + | chr5_4:59504114-59504133 | Msa0860650:CDS | 35.0% |
| !! | GTGCTTTTTGAATAATCTCG+AGG | - | chr5_4:59504147-59504166 | None:intergenic | 35.0% |
| AGAACTTGTAAGAGTGATTG+GGG | + | chr5_4:59504507-59504526 | Msa0860650:intron | 35.0% | |
| GTGCTTACGAAAACATCTTA+TGG | + | chr5_4:59504743-59504762 | Msa0860650:intron | 35.0% | |
| TGAAAGCTAAGGTGAATAAG+CGG | - | chr5_4:59504787-59504806 | None:intergenic | 35.0% | |
| GACAATCATTAGAGTTACAC+TGG | + | chr5_4:59504986-59505005 | Msa0860650:intron | 35.0% | |
| TATAACAGCCTACATAAGCA+AGG | - | chr5_4:59505089-59505108 | None:intergenic | 35.0% | |
| ! | AATCAAAGCACCAGAAAAAG+TGG | + | chr5_4:59505141-59505160 | Msa0860650:CDS | 35.0% |
| CAAATATTACAACTCGCAAG+CGG | - | chr5_4:59505226-59505245 | None:intergenic | 35.0% | |
| AATCTCCTCACTATGTGATT+CGG | - | chr5_4:59505317-59505336 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr5_4:59505556-59505575 | None:intergenic | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr5_4:59505557-59505576 | None:intergenic | 35.0% | |
| TTAGGGACTAAAAATGCTGA+CGG | + | chr5_4:59505578-59505597 | Msa0860650:intron | 35.0% | |
| ATAGGGACTAAAAATGCTGA+TGG | + | chr5_4:59505610-59505629 | Msa0860650:intron | 35.0% | |
| CTTACTCTCTAAACACTACA+AGG | + | chr5_4:59505845-59505864 | Msa0860650:intron | 35.0% | |
| TAAGAACTCGTGAGATTGTT+TGG | + | chr5_4:59505956-59505975 | Msa0860650:intron | 35.0% | |
| CATGTCTATAAGCTGTATTC+AGG | + | chr5_4:59506218-59506237 | Msa0860650:intron | 35.0% | |
| TTATTCAAACAAGGCCTAGT+AGG | + | chr5_4:59506354-59506373 | Msa0860650:intron | 35.0% | |
| TGATTGAAACACACCTAAAC+TGG | + | chr5_4:59506382-59506401 | Msa0860650:intron | 35.0% | |
| GATTGAAACACACCTAAACT+GGG | + | chr5_4:59506383-59506402 | Msa0860650:intron | 35.0% | |
| TTATTCAAACAAGGCCTAGT+AGG | + | chr5_4:59506354-59506373 | Msa0860650:intron | 35.0% | |
| TATTCAAACAAGGCCTAGTA+GGG | + | chr5_4:59506355-59506374 | Msa0860650:intron | 35.0% | |
| TTTCAGTCATATACCCTACT+AGG | - | chr5_4:59506472-59506491 | None:intergenic | 35.0% | |
| ! | AATCAAAGCACCAGAAAAAG+TGG | + | chr5_4:59505141-59505160 | Msa0860650:CDS | 35.0% |
| ATTGTATTGGATGCCTTGAT+AGG | + | chr5_4:59506826-59506845 | Msa0860650:intron | 35.0% | |
| AATCTCCTCACTATGCAATT+CGG | - | chr5_4:59506863-59506882 | None:intergenic | 35.0% | |
| CACAGTCTTCTTCAAAAAAG+AGG | - | chr5_4:59507095-59507114 | None:intergenic | 35.0% | |
| ATCCTCCATCAGATAATGTT+TGG | + | chr5_4:59507544-59507563 | Msa0860650:CDS | 35.0% | |
| TCCTCCATCAGATAATGTTT+GGG | + | chr5_4:59507545-59507564 | Msa0860650:CDS | 35.0% | |
| !!! | AAGAAACCTTGTTTTGTGTG+TGG | + | chr5_4:59507630-59507649 | Msa0860650:CDS | 35.0% |
| GGCAGTTTGAGTCATAATAA+TGG | + | chr5_4:59507651-59507670 | Msa0860650:CDS | 35.0% | |
| !! | ATAAGTTTGATCGATTTGCG+TGG | + | chr5_4:59507766-59507785 | Msa0860650:intron | 35.0% |
| !! | ATGGTGGTTTGTTCAAATTC+CGG | + | chr5_4:59508019-59508038 | Msa0860650:intron | 35.0% |
| GTGCAAAAATGATTATTCGC+AGG | + | chr5_4:59508426-59508445 | Msa0860650:CDS | 35.0% | |
| GGAAAATGAAGCGAAAAAGT+TGG | - | chr5_4:59508474-59508493 | None:intergenic | 35.0% | |
| GTTTCCCATAAAAGAAAAGG+AGG | - | chr5_4:59508495-59508514 | None:intergenic | 35.0% | |
| TGCTATGTGTGCAAGAAATT+TGG | + | chr5_4:59508635-59508654 | Msa0860650:CDS | 35.0% | |
| ! | TTGTATTGACACAGCATAAG+TGG | - | chr5_4:59508661-59508680 | None:intergenic | 35.0% |
| TTGCTACAAATGTGGTCAAA+TGG | + | chr5_4:59508706-59508725 | Msa0860650:CDS | 35.0% | |
| TGCTACAAATGTGGTCAAAT+GGG | + | chr5_4:59508707-59508726 | Msa0860650:CDS | 35.0% | |
| ! | TCAAATGGGTCATATTGGTT+GGG | + | chr5_4:59508721-59508740 | Msa0860650:CDS | 35.0% |
| GCATGCTTATGAAGATCAAT+TGG | + | chr5_4:59508946-59508965 | Msa0860650:intron | 35.0% | |
| TTATGAAGATCAATTGGTGC+AGG | + | chr5_4:59508952-59508971 | Msa0860650:intron | 35.0% | |
| ATTATAGCATGAACTAGGTG+TGG | - | chr5_4:59509014-59509033 | None:intergenic | 35.0% | |
| CCTAGTTCATGCTATAATTG+CGG | + | chr5_4:59509016-59509035 | Msa0860650:intron | 35.0% | |
| TAACAGAACTTGAGCATTCT+CGG | - | chr5_4:59509060-59509079 | None:intergenic | 35.0% | |
| AGAATGCTCAAGTTCTGTTA+AGG | + | chr5_4:59509060-59509079 | Msa0860650:intron | 35.0% | |
| TCTAGACCATCATTTCTGAA+TGG | + | chr5_4:59509160-59509179 | Msa0860650:intron | 35.0% | |
| !! | AGTTTGGTGTATGTATTCCT+TGG | - | chr5_4:59509259-59509278 | None:intergenic | 35.0% |
| ! | GTCTCAAATTTGGTTTCAGA+TGG | + | chr5_4:59509377-59509396 | Msa0860650:intron | 35.0% |
| CCAGAAAAAAAACAGCTACA+GGG | - | chr5_4:59509471-59509490 | None:intergenic | 35.0% | |
| ACCAGAAAAAAAACAGCTAC+AGG | - | chr5_4:59509472-59509491 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTGGTCCCTGTTAA+AGG | + | chr5_4:59509481-59509500 | Msa0860650:intron | 35.0% |
| !! | TTTTTCTGGTCCCTGTTAAA+GGG | + | chr5_4:59509482-59509501 | Msa0860650:intron | 35.0% |
| AACCAAAACACCCTTTAACA+GGG | - | chr5_4:59509495-59509514 | None:intergenic | 35.0% | |
| TAACCAAAACACCCTTTAAC+AGG | - | chr5_4:59509496-59509515 | None:intergenic | 35.0% | |
| !!! | GTTAAAGGGTGTTTTGGTTA+CGG | + | chr5_4:59509496-59509515 | Msa0860650:intron | 35.0% |
| !! | TACCTTTTGGTAACAGGTTT+TGG | + | chr5_4:59509526-59509545 | Msa0860650:intron | 35.0% |
| !! | ACCTTTTGGTAACAGGTTTT+GGG | + | chr5_4:59509527-59509546 | Msa0860650:intron | 35.0% |
| TAATGAGGATCAATCAATGC+AGG | + | chr5_4:59509655-59509674 | Msa0860650:intron | 35.0% | |
| TAACAGAACTTGAGCATTCT+CGG | - | chr5_4:59509060-59509079 | None:intergenic | 35.0% | |
| AGAATGCTCAAGTTCTGTTA+AGG | + | chr5_4:59509060-59509079 | Msa0860650:intron | 35.0% | |
| AGATCTGCACCTTATGATAA+TGG | + | chr5_4:59510033-59510052 | Msa0860650:CDS | 35.0% | |
| AATCAAAACATAGAGGTGGT+TGG | + | chr5_4:59510115-59510134 | Msa0860650:CDS | 35.0% | |
| TTATCCCTTTCGGAATTGAA+TGG | - | chr5_4:59510168-59510187 | None:intergenic | 35.0% | |
| TCAATTCCGAAAGGGATAAT+TGG | + | chr5_4:59510169-59510188 | Msa0860650:CDS | 35.0% | |
| TTGAGAGAAGTTACAACAAC+GGG | + | chr5_4:59510382-59510401 | Msa0860650:CDS | 35.0% | |
| TGTTTGTCTCATCTTCCAAA+TGG | + | chr5_4:59510575-59510594 | Msa0860650:three_prime_UTR | 35.0% | |
| GTTTGTCTCATCTTCCAAAT+GGG | + | chr5_4:59510576-59510595 | Msa0860650:three_prime_UTR | 35.0% | |
| GAACCAAAAAGAAATCAGCG+AGG | + | chr5_4:59504029-59504048 | Msa0860650:CDS | 40.0% | |
| !!! | CTTCCTCGCTGATTTCTTTT+TGG | - | chr5_4:59504035-59504054 | None:intergenic | 40.0% |
| ! | CGTTTTGTGGAGTAATTGCA+CGG | - | chr5_4:59504177-59504196 | None:intergenic | 40.0% |
| CGTGCAATTACTCCACAAAA+CGG | + | chr5_4:59504175-59504194 | Msa0860650:CDS | 40.0% | |
| TACTGTCTGTGTATCCGATA+CGG | - | chr5_4:59504203-59504222 | None:intergenic | 40.0% | |
| CACAGACAGTAAAGAAGAAG+AGG | + | chr5_4:59504212-59504231 | Msa0860650:CDS | 40.0% | |
| !!! | TGTTTTAGAGCGGTTTGCAT+TGG | + | chr5_4:59504458-59504477 | Msa0860650:intron | 40.0% |
| GTAGCTTACATTAAGCGCTT+AGG | + | chr5_4:59504671-59504690 | Msa0860650:intron | 40.0% | |
| !! | TAACTTGGCCTTGCTTATGT+AGG | + | chr5_4:59505078-59505097 | Msa0860650:intron | 40.0% |
| !!! | TTAGCATGCTCCACTTTTTC+TGG | - | chr5_4:59505154-59505173 | None:intergenic | 40.0% |
| AAAAGTGGAGCATGCTAAAG+TGG | + | chr5_4:59505156-59505175 | Msa0860650:CDS | 40.0% | |
| ATGTCGTGCTAACACTGTAT+TGG | + | chr5_4:59505267-59505286 | Msa0860650:intron | 40.0% | |
| ! | ACTGTATTGGATGCATTGAC+AGG | + | chr5_4:59505280-59505299 | Msa0860650:intron | 40.0% |
| TTGAAAATATGGGTAGGGGT+GGG | - | chr5_4:59506998-59507017 | None:intergenic | 40.0% | |
| ATTGAAAATATGGGTAGGGG+TGG | - | chr5_4:59506999-59507018 | None:intergenic | 40.0% | |
| CTTTCTTGGTTGACCAAGAA+TGG | - | chr5_4:59507032-59507051 | None:intergenic | 40.0% | |
| TTCAACTCACAAGCAGCTTA+CGG | - | chr5_4:59507419-59507438 | None:intergenic | 40.0% | |
| CATATACCCAAAGTAAGCCT+TGG | - | chr5_4:59507487-59507506 | None:intergenic | 40.0% | |
| TTTCTGTTCTATCATCAGCG+TGG | + | chr5_4:59507507-59507526 | Msa0860650:intron | 40.0% | |
| GATGGAGGATCAAAATACCT+GGG | - | chr5_4:59507534-59507553 | None:intergenic | 40.0% | |
| TGATGGAGGATCAAAATACC+TGG | - | chr5_4:59507535-59507554 | None:intergenic | 40.0% | |
| CCTCCATCAGATAATGTTTG+GGG | + | chr5_4:59507546-59507565 | Msa0860650:CDS | 40.0% | |
| GTTCCCCAAACATTATCTGA+TGG | - | chr5_4:59507552-59507571 | None:intergenic | 40.0% | |
| CCATGCTTCTTTCAACTGTA+CGG | + | chr5_4:59507596-59507615 | Msa0860650:CDS | 40.0% | |
| AAACTGCCACACACAAAACA+AGG | - | chr5_4:59507639-59507658 | None:intergenic | 40.0% | |
| ATCGCTTAGCGAAACAATAG+AGG | - | chr5_4:59507970-59507989 | None:intergenic | 40.0% | |
| GTGTTGTCAACCACGAAAAA+TGG | + | chr5_4:59508000-59508019 | Msa0860650:intron | 40.0% | |
| TTGTCAACCACGAAAAATGG+TGG | + | chr5_4:59508003-59508022 | Msa0860650:intron | 40.0% | |
| !! | GAACAAACCACCATTTTTCG+TGG | - | chr5_4:59508013-59508032 | None:intergenic | 40.0% |
| ! | CCTTTTATCTTCTGTAGGGA+CGG | + | chr5_4:59508275-59508294 | Msa0860650:intron | 40.0% |
| TTGACAGTATGCTTGAGATG+CGG | + | chr5_4:59508379-59508398 | Msa0860650:CDS | 40.0% | |
| TTATTCGCAGGATGATCTCA+AGG | + | chr5_4:59508438-59508457 | Msa0860650:CDS | 40.0% | |
| TGTGGTCAAATGGGTCATAT+TGG | + | chr5_4:59508716-59508735 | Msa0860650:CDS | 40.0% | |
| GTCAAATGGGTCATATTGGT+TGG | + | chr5_4:59508720-59508739 | Msa0860650:CDS | 40.0% | |
| CCGCAATTATAGCATGAACT+AGG | - | chr5_4:59509019-59509038 | None:intergenic | 40.0% | |
| TGCTATAATTGCGGTGAACA+AGG | + | chr5_4:59509025-59509044 | Msa0860650:intron | 40.0% | |
| AACAGAACTTGAGCATTCTC+GGG | - | chr5_4:59509059-59509078 | None:intergenic | 40.0% | |
| AGAAATGATGGTCTAGATCG+AGG | - | chr5_4:59509157-59509176 | None:intergenic | 40.0% | |
| AGAGAGCCATTCAGAAATGA+TGG | - | chr5_4:59509169-59509188 | None:intergenic | 40.0% | |
| AGACAAGAAAAAAGGTCCCT+CGG | - | chr5_4:59509361-59509380 | None:intergenic | 40.0% | |
| !!! | CCCTGTAGCTGTTTTTTTTC+TGG | + | chr5_4:59509468-59509487 | Msa0860650:intron | 40.0% |
| ACCCAAAACCTGTTACCAAA+AGG | - | chr5_4:59509531-59509550 | None:intergenic | 40.0% | |
| CTACACCTAGTTCATGCTAT+AGG | + | chr5_4:59509714-59509733 | Msa0860650:CDS | 40.0% | |
| AACAGAACTTGAGCATTCTC+GGG | - | chr5_4:59509059-59509078 | None:intergenic | 40.0% | |
| CATGTGACCATTCTCTTTCT+GGG | - | chr5_4:59510007-59510026 | None:intergenic | 40.0% | |
| CAGAAAGAGAATGGTCACAT+GGG | + | chr5_4:59510006-59510025 | Msa0860650:CDS | 40.0% | |
| AAAACATAGAGGTGGTTGGA+CGG | + | chr5_4:59510119-59510138 | Msa0860650:CDS | 40.0% | |
| TCTCTCCATTCAATTCCGAA+AGG | + | chr5_4:59510160-59510179 | Msa0860650:CDS | 40.0% | |
| CTCTCCATTCAATTCCGAAA+GGG | + | chr5_4:59510161-59510180 | Msa0860650:CDS | 40.0% | |
| ATTCCGAAAGGGATAATTGG+AGG | + | chr5_4:59510172-59510191 | Msa0860650:CDS | 40.0% | |
| AGACCTCCAATTATCCCTTT+CGG | - | chr5_4:59510178-59510197 | None:intergenic | 40.0% | |
| TTTACGCGGAATGTTCATGA+TGG | + | chr5_4:59510276-59510295 | Msa0860650:CDS | 40.0% | |
| GATGGAACTCCTAATTCAGA+AGG | + | chr5_4:59510294-59510313 | Msa0860650:CDS | 40.0% | |
| CTGGTTGATCCTTCTGAATT+AGG | - | chr5_4:59510306-59510325 | None:intergenic | 40.0% | |
| CTAATTCAGAAGGATCAACC+AGG | + | chr5_4:59510304-59510323 | Msa0860650:CDS | 40.0% | |
| ! | TCAACCAGGACTTTTCATCA+TGG | + | chr5_4:59510318-59510337 | Msa0860650:CDS | 40.0% |
| ! | CAACCAGGACTTTTCATCAT+GGG | + | chr5_4:59510319-59510338 | Msa0860650:CDS | 40.0% |
| TTTGGCAACTCGAGTAGTAA+TGG | + | chr5_4:59510357-59510376 | Msa0860650:CDS | 40.0% | |
| GAAGATAGAGCTCGAAGAAG+AGG | + | chr5_4:59504051-59504070 | Msa0860650:CDS | 45.0% | |
| AAGCACAATAGAGCCCTGTT+TGG | - | chr5_4:59504729-59504748 | None:intergenic | 45.0% | |
| GGAGCATGCTAAAGTGGAAA+CGG | + | chr5_4:59505162-59505181 | Msa0860650:CDS | 45.0% | |
| GAGCATGCTAAAGTGGAAAC+GGG | + | chr5_4:59505163-59505182 | Msa0860650:CDS | 45.0% | |
| TACGAGCGACAATGTTGTTC+TGG | + | chr5_4:59505195-59505214 | Msa0860650:CDS | 45.0% | |
| ACGAGCGACAATGTTGTTCT+GGG | + | chr5_4:59505196-59505215 | Msa0860650:CDS | 45.0% | |
| CTCTAAACACTACAAGGGTG+TGG | + | chr5_4:59505851-59505870 | Msa0860650:intron | 45.0% | |
| AAACTCAATATGGCCCTGTC+TGG | - | chr5_4:59506181-59506200 | None:intergenic | 45.0% | |
| TGACTGAAACACGCCTAACT+TGG | + | chr5_4:59506483-59506502 | Msa0860650:intron | 45.0% | |
| !!! | TCGGCATTCTCCACTTTTTC+TGG | - | chr5_4:59506700-59506719 | None:intergenic | 45.0% |
| AGAAAAAGTGGAGAATGCCG+AGG | + | chr5_4:59506699-59506718 | Msa0860650:CDS | 45.0% | |
| CTCACTATGCAATTCGGAAG+CGG | - | chr5_4:59506857-59506876 | None:intergenic | 45.0% | |
| TGAAAATATGGGTAGGGGTG+GGG | - | chr5_4:59506997-59507016 | None:intergenic | 45.0% | |
| GCTTTGTAGTGCTAGAGAGT+AGG | - | chr5_4:59507118-59507137 | None:intergenic | 45.0% | |
| TCTCTAGCACTACAAAGCTG+TGG | + | chr5_4:59507120-59507139 | Msa0860650:intron | 45.0% | |
| GATTGAAGACCCAGAGAAAG+TGG | + | chr5_4:59507338-59507357 | Msa0860650:CDS | 45.0% | |
| TTGCTCGTATTAACCACCCT+TGG | - | chr5_4:59507384-59507403 | None:intergenic | 45.0% | |
| ATGGTACTGTACTGTCTCCA+AGG | + | chr5_4:59507467-59507486 | Msa0860650:intron | 45.0% | |
| ACTGTCTCCAAGGCTTACTT+TGG | + | chr5_4:59507477-59507496 | Msa0860650:intron | 45.0% | |
| CTGTCTCCAAGGCTTACTTT+GGG | + | chr5_4:59507478-59507497 | Msa0860650:intron | 45.0% | |
| CCCCAAACATTATCTGATGG+AGG | - | chr5_4:59507549-59507568 | None:intergenic | 45.0% | |
| TGGGGAACATGCTATAACTG+CGG | + | chr5_4:59507564-59507583 | Msa0860650:CDS | 45.0% | |
| CCGTACAGTTGAAAGAAGCA+TGG | - | chr5_4:59507599-59507618 | None:intergenic | 45.0% | |
| CTCAAGTCAATCCAGCCTAA+TGG | - | chr5_4:59507890-59507909 | None:intergenic | 45.0% | |
| GTTCAAATTCCGGAACGCTA+TGG | + | chr5_4:59508029-59508048 | Msa0860650:intron | 45.0% | |
| CTATAGCAACCATAGCGTTC+CGG | - | chr5_4:59508041-59508060 | None:intergenic | 45.0% | |
| GAACGCTATGGTTGCTATAG+CGG | + | chr5_4:59508041-59508060 | Msa0860650:intron | 45.0% | |
| CCGTCCCTACAGAAGATAAA+AGG | - | chr5_4:59508278-59508297 | None:intergenic | 45.0% | |
| TCTTTGGACAGTCGCTACTT+CGG | - | chr5_4:59508330-59508349 | None:intergenic | 45.0% | |
| TGACAGTATGCTTGAGATGC+GGG | + | chr5_4:59508380-59508399 | Msa0860650:CDS | 45.0% | |
| TGATGTGCTTTACTCCCAGT+AGG | - | chr5_4:59508863-59508882 | None:intergenic | 45.0% | |
| AATTGGTGCAGGCATGTTCA+AGG | + | chr5_4:59508963-59508982 | Msa0860650:intron | 45.0% | |
| ATAGCATGAACTAGGTGTGG+TGG | - | chr5_4:59509011-59509030 | None:intergenic | 45.0% | |
| TGAATGGCTCTCTCTTTCCA+AGG | + | chr5_4:59509176-59509195 | Msa0860650:intron | 45.0% | |
| GAATGGCTCTCTCTTTCCAA+GGG | + | chr5_4:59509177-59509196 | Msa0860650:intron | 45.0% | |
| ! | AATTTGGTTTCAGATGGGCG+TGG | + | chr5_4:59509383-59509402 | Msa0860650:intron | 45.0% |
| !!! | GTCCCTGTTAAAGGGTGTTT+TGG | + | chr5_4:59509490-59509509 | Msa0860650:intron | 45.0% |
| !! | CTGTTACCAAAAGGTACCCA+GGG | - | chr5_4:59509522-59509541 | None:intergenic | 45.0% |
| !! | TTTTGGGTGTGAGCCTTTAG+AGG | + | chr5_4:59509543-59509562 | Msa0860650:intron | 45.0% |
| CACCTTGCACAAGATGAACA+GGG | - | chr5_4:59509592-59509611 | None:intergenic | 45.0% | |
| AATCAATGCAGGCAAGCTCA+AGG | + | chr5_4:59509666-59509685 | Msa0860650:intron | 45.0% | |
| TGAACTAGGTGTAGCTGGAT+CGG | - | chr5_4:59509708-59509727 | None:intergenic | 45.0% | |
| TAGCATGAACTAGGTGTAGC+TGG | - | chr5_4:59509713-59509732 | None:intergenic | 45.0% | |
| CCACACCTATAGCATGAACT+AGG | - | chr5_4:59509722-59509741 | None:intergenic | 45.0% | |
| CCTAGTTCATGCTATAGGTG+TGG | + | chr5_4:59509719-59509738 | Msa0860650:CDS | 45.0% | |
| TGCTATAGGTGTGGTGAAGA+AGG | + | chr5_4:59509728-59509747 | Msa0860650:CDS | 45.0% | |
| !! | CCATTCTCTTTCTGGGATCT+TGG | - | chr5_4:59510000-59510019 | None:intergenic | 45.0% |
| CCAAGATCCCAGAAAGAGAA+TGG | + | chr5_4:59509997-59510016 | Msa0860650:CDS | 45.0% | |
| CCATGTGACCATTCTCTTTC+TGG | - | chr5_4:59510008-59510027 | None:intergenic | 45.0% | |
| CCAGAAAGAGAATGGTCACA+TGG | + | chr5_4:59510005-59510024 | Msa0860650:CDS | 45.0% | |
| GTACCCATGATGAAAAGTCC+TGG | - | chr5_4:59510325-59510344 | None:intergenic | 45.0% | |
| ATCATGGGTACTCAGCTTCT+AGG | + | chr5_4:59510334-59510353 | Msa0860650:CDS | 45.0% | |
| AGAGAAGTTACAACAACGGG+TGG | + | chr5_4:59510385-59510404 | Msa0860650:CDS | 45.0% | |
| GCTCAAGTCAAAGTCCCATT+TGG | - | chr5_4:59510593-59510612 | None:intergenic | 45.0% | |
| !!! | AATTTATTTTATCTTTTTTA+TGG | + | chr5_4:59504646-59504665 | Msa0860650:intron | 5.0% |
| !!! | AATATTTTTTAAAAATAGTT+TGG | - | chr5_4:59509275-59509294 | None:intergenic | 5.0% |
| !! | AAATAATAAATAAATTAATG+AGG | + | chr5_4:59509640-59509659 | Msa0860650:intron | 5.0% |
| TGCTAAAGTGGAAACGGGCA+TGG | + | chr5_4:59505168-59505187 | Msa0860650:CDS | 50.0% | |
| CGCTTCCGAATCACATAGTG+AGG | + | chr5_4:59505309-59505328 | Msa0860650:CDS | 50.0% | |
| AAAAGTGGAGAATGCCGAGG+TGG | + | chr5_4:59506702-59506721 | Msa0860650:CDS | 50.0% | |
| AACCATGCCTGTTTCCACCT+CGG | - | chr5_4:59506719-59506738 | None:intergenic | 50.0% | |
| ! | TACGAGCGACAGTGTTGTTC+TGG | + | chr5_4:59506741-59506760 | Msa0860650:CDS | 50.0% |
| ! | ACGAGCGACAGTGTTGTTCT+GGG | + | chr5_4:59506742-59506761 | Msa0860650:CDS | 50.0% |
| GGAAGCGGTGTTTCCTATCA+AGG | - | chr5_4:59506842-59506861 | None:intergenic | 50.0% | |
| CGCTTCCGAATTGCATAGTG+AGG | + | chr5_4:59506855-59506874 | Msa0860650:CDS | 50.0% | |
| GAAAATATGGGTAGGGGTGG+GGG | - | chr5_4:59506996-59507015 | None:intergenic | 50.0% | |
| CACCAGGTACCACTTTCTCT+GGG | - | chr5_4:59507350-59507369 | None:intergenic | 50.0% | |
| TCACCAGGTACCACTTTCTC+TGG | - | chr5_4:59507351-59507370 | None:intergenic | 50.0% | |
| TGGTGAAGCAGCAGAACCAA+GGG | + | chr5_4:59507365-59507384 | Msa0860650:CDS | 50.0% | |
| AACTCACAAGCAGCTTACGG+AGG | - | chr5_4:59507416-59507435 | None:intergenic | 50.0% | |
| TGCTATAACTGCGGCGAAGA+AGG | + | chr5_4:59507573-59507592 | Msa0860650:CDS | 50.0% | |
| CAAGGTCTGTTTGACTGCGT+TGG | + | chr5_4:59507828-59507847 | Msa0860650:intron | 50.0% | |
| ! | GACTGTCCAAAGAAGCACAC+AGG | + | chr5_4:59508337-59508356 | Msa0860650:CDS | 50.0% |
| ! | TGTCCAAAGAAGCACACAGG+TGG | + | chr5_4:59508340-59508359 | Msa0860650:CDS | 50.0% |
| TGCTTGAGATGCGGGAATTC+TGG | + | chr5_4:59508388-59508407 | Msa0860650:CDS | 50.0% | |
| GCTTGAGATGCGGGAATTCT+GGG | + | chr5_4:59508389-59508408 | Msa0860650:CDS | 50.0% | |
| ATTTAGGGGAGAGTTTGCCG+AGG | + | chr5_4:59509341-59509360 | Msa0860650:intron | 50.0% | |
| TTTAGGGGAGAGTTTGCCGA+GGG | + | chr5_4:59509342-59509361 | Msa0860650:intron | 50.0% | |
| !! | CCTGTTACCAAAAGGTACCC+AGG | - | chr5_4:59509523-59509542 | None:intergenic | 50.0% |
| !! | CCTGGGTACCTTTTGGTAAC+AGG | + | chr5_4:59509520-59509539 | Msa0860650:intron | 50.0% |
| GTCCCTGTTCATCTTGTGCA+AGG | + | chr5_4:59509587-59509606 | Msa0860650:intron | 50.0% | |
| GCACCTTGCACAAGATGAAC+AGG | - | chr5_4:59509593-59509612 | None:intergenic | 50.0% | |
| ! | TGTAGCTGGATCGGTGTTCT+CGG | - | chr5_4:59509699-59509718 | None:intergenic | 50.0% |
| TGTTTCCTGTTGCCTACCTG+AGG | - | chr5_4:59509955-59509974 | None:intergenic | 50.0% | |
| GGGTACTCAGCTTCTAGGTT+TGG | + | chr5_4:59510339-59510358 | Msa0860650:CDS | 50.0% | |
| TCCACAAAACGGCGCCGTAT+CGG | + | chr5_4:59504186-59504205 | Msa0860650:CDS | 55.0% | |
| GAGAATGCCGAGGTGGAAAC+AGG | + | chr5_4:59506709-59506728 | Msa0860650:CDS | 55.0% | |
| GACCCAGAGAAAGTGGTACC+TGG | + | chr5_4:59507345-59507364 | Msa0860650:CDS | 55.0% | |
| !! | CTTGGTTCTGCTGCTTCACC+AGG | - | chr5_4:59507366-59507385 | None:intergenic | 55.0% |
| CTGGTGAAGCAGCAGAACCA+AGG | + | chr5_4:59507364-59507383 | Msa0860650:CDS | 55.0% | |
| TGAAGCAGCAGAACCAAGGG+TGG | + | chr5_4:59507368-59507387 | Msa0860650:CDS | 55.0% | |
| TCTATCATCAGCGTGGTCCC+AGG | + | chr5_4:59507514-59507533 | Msa0860650:intron | 55.0% | |
| ! | TAATCCGCGGGCTGAGTCTA+TGG | + | chr5_4:59507803-59507822 | Msa0860650:intron | 55.0% |
| TGTACCATAGACTCAGCCCG+CGG | - | chr5_4:59507810-59507829 | None:intergenic | 55.0% | |
| CGGGCTGAGTCTATGGTACA+AGG | + | chr5_4:59507810-59507829 | Msa0860650:intron | 55.0% | |
| GGTCTGTTTGACTGCGTTGG+TGG | + | chr5_4:59507831-59507850 | Msa0860650:intron | 55.0% | |
| !! | GTTTGACTGCGTTGGTGGCT+AGG | + | chr5_4:59507836-59507855 | Msa0860650:intron | 55.0% |
| TGGCTAGGTGATACTGCTCC+TGG | + | chr5_4:59507851-59507870 | Msa0860650:intron | 55.0% | |
| AATGGTGCATGCACTGCACC+AGG | - | chr5_4:59507872-59507891 | None:intergenic | 55.0% | |
| GGTGCAGTGCATGCACCATT+AGG | + | chr5_4:59507872-59507891 | Msa0860650:intron | 55.0% | |
| CAGTGCATGCACCATTAGGC+TGG | + | chr5_4:59507876-59507895 | Msa0860650:intron | 55.0% | |
| TGGTTGCTATAGCGGCGTGA+TGG | + | chr5_4:59508049-59508068 | Msa0860650:intron | 55.0% | |
| TGCTCTACCTGCAAGCTAGC+TGG | + | chr5_4:59508301-59508320 | Msa0860650:CDS | 55.0% | |
| GAGCCACCTGTGTGCTTCTT+TGG | - | chr5_4:59508346-59508365 | None:intergenic | 55.0% | |
| !!! | GGTGTTTTGGTTACGGCCCT+GGG | + | chr5_4:59509503-59509522 | Msa0860650:intron | 55.0% |
| ! | TTACGGCCCTGGGTACCTTT+TGG | + | chr5_4:59509513-59509532 | Msa0860650:intron | 55.0% |
| CAATGCAGGCAAGCTCAAGG+TGG | + | chr5_4:59509669-59509688 | Msa0860650:intron | 55.0% | |
| ! | GTAGCTGGATCGGTGTTCTC+GGG | - | chr5_4:59509698-59509717 | None:intergenic | 55.0% |
| TTCCTGTTGCCTACCTGAGG+AGG | - | chr5_4:59509952-59509971 | None:intergenic | 55.0% | |
| !! | TCCGATACGGCGCCGTTTTG+TGG | - | chr5_4:59504190-59504209 | None:intergenic | 60.0% |
| TGCCGAGGTGGAAACAGGCA+TGG | + | chr5_4:59506714-59506733 | Msa0860650:CDS | 60.0% | |
| ! | CGGCGTGATGGAGATGCAAG+CGG | + | chr5_4:59508061-59508080 | Msa0860650:intron | 60.0% |
| ! | TCGGTGACCAGCTAGCTTGC+AGG | - | chr5_4:59508311-59508330 | None:intergenic | 60.0% |
| ACTAGGTGTGGTGGCAGCAG+TGG | - | chr5_4:59509002-59509021 | None:intergenic | 60.0% | |
| !!! | GGGTGTTTTGGTTACGGCCC+TGG | + | chr5_4:59509502-59509521 | Msa0860650:intron | 60.0% |
| ! | GGTTGGACGGCAGAGCATTC+TGG | + | chr5_4:59510132-59510151 | Msa0860650:CDS | 60.0% |
| TGTGCTGCGTTCGCCTCCTC+AGG | + | chr5_4:59509936-59509955 | Msa0860650:intron | 65.0% | |
| CTGCGTTCGCCTCCTCAGGT+AGG | + | chr5_4:59509940-59509959 | Msa0860650:intron | 65.0% | |
| CGCCTCCTCAGGTAGGCAAC+AGG | + | chr5_4:59509947-59509966 | Msa0860650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 59503941 | 59510618 | 59503941 | ID=Msa0860650;Name=Msa0860650 |
| chr5_4 | mRNA | 59503941 | 59510618 | 59503941 | ID=Msa0860650-mRNA-1;Parent=Msa0860650;Name=Msa0860650-mRNA-1;_AED=0.13;_eAED=0.13;_QI=84|0.9|1|1|1|1|11|208|606 |
| chr5_4 | exon | 59503941 | 59504267 | 59503941 | ID=Msa0860650-mRNA-1:exon:18256;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59505100 | 59505217 | 59505100 | ID=Msa0860650-mRNA-1:exon:18257;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59505302 | 59505399 | 59505302 | ID=Msa0860650-mRNA-1:exon:18258;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59506646 | 59506763 | 59506646 | ID=Msa0860650-mRNA-1:exon:18259;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59506848 | 59506939 | 59506848 | ID=Msa0860650-mRNA-1:exon:18260;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59507288 | 59507428 | 59507288 | ID=Msa0860650-mRNA-1:exon:18261;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59507525 | 59507689 | 59507525 | ID=Msa0860650-mRNA-1:exon:18262;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59508292 | 59508459 | 59508292 | ID=Msa0860650-mRNA-1:exon:18263;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59508626 | 59508742 | 59508626 | ID=Msa0860650-mRNA-1:exon:18264;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59509677 | 59509784 | 59509677 | ID=Msa0860650-mRNA-1:exon:18265;Parent=Msa0860650-mRNA-1 |
| chr5_4 | exon | 59509958 | 59510618 | 59509958 | ID=Msa0860650-mRNA-1:exon:18266;Parent=Msa0860650-mRNA-1 |
| chr5_4 | five_prime_UTR | 59503941 | 59504024 | 59503941 | ID=Msa0860650-mRNA-1:five_prime_utr;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59504025 | 59504267 | 59504025 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59505100 | 59505217 | 59505100 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59505302 | 59505399 | 59505302 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59506646 | 59506763 | 59506646 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59506848 | 59506939 | 59506848 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59507288 | 59507428 | 59507288 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59507525 | 59507689 | 59507525 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59508292 | 59508459 | 59508292 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59508626 | 59508742 | 59508626 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59509677 | 59509784 | 59509677 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | CDS | 59509958 | 59510410 | 59509958 | ID=Msa0860650-mRNA-1:cds;Parent=Msa0860650-mRNA-1 |
| chr5_4 | three_prime_UTR | 59510411 | 59510618 | 59510411 | ID=Msa0860650-mRNA-1:three_prime_utr;Parent=Msa0860650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
