AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1341490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341490 MtrunA17_Chr7g0275711 96.965 626 18 1 1 626 1 625 0.0 1236
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341490 AT3G61800.1 51.529 654 257 12 13 626 8 641 0.0 611
Msa1341490 AT3G61800.2 51.529 654 257 12 13 626 8 641 0.0 611

Find 151 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATCACTACTCATATTT+TGG 0.084349 tig0004829:+42741 None:intergenic
GAATATGTATAAATAAATTT+AGG 0.099260 tig0004829:-44381 Msa1341490:five_prime_UTR
TGAAGAGTTCGTCAATTATT+TGG 0.177904 tig0004829:+43626 None:intergenic
ACTTGCTTCTCAAACCTTAA+TGG 0.182401 tig0004829:-44142 Msa1341490:CDS
TCAGTTAACTTGTATGATTT+TGG 0.224015 tig0004829:-41915 Msa1341490:three_prime_UTR
TTCAATTCAAAATCAGATAA+AGG 0.253513 tig0004829:-44355 Msa1341490:five_prime_UTR
GCTTGAGGACTTTCGCTCTT+TGG 0.264270 tig0004829:-43155 Msa1341490:CDS
TCAAGAATGGGTTTCTGTTC+TGG 0.266520 tig0004829:-43002 Msa1341490:CDS
GACTCTCATTGTTGAGAGTT+TGG 0.271333 tig0004829:-43584 Msa1341490:CDS
ACTTCAAGATCAGCCGCTTT+TGG 0.271514 tig0004829:-42104 Msa1341490:CDS
ATGAAAATTTGTCCATTTCA+TGG 0.272246 tig0004829:-42374 Msa1341490:CDS
ACGCTTCATGAGATCCATTA+AGG 0.280350 tig0004829:+44128 None:intergenic
CCCCTCTCAGTTCAAATAAT+TGG 0.283562 tig0004829:+41799 None:intergenic
TAACTGATTTAACACGGTTT+TGG 0.295994 tig0004829:+42918 None:intergenic
AATATGTATAAATAAATTTA+GGG 0.296062 tig0004829:-44380 Msa1341490:five_prime_UTR
GGGGTTCTCACTTGGATACT+TGG 0.305283 tig0004829:-42598 Msa1341490:CDS
GTGCAAAACTTGCTAAAATT+CGG 0.324391 tig0004829:-42169 Msa1341490:CDS
TGTCCTTGAGTGTTGGGTTT+CGG 0.338318 tig0004829:-43552 Msa1341490:CDS
GAAAAGAGAAATTGATAAAC+AGG 0.344103 tig0004829:-42201 Msa1341490:CDS
ATTCAGAGATTCTACTTTGA+AGG 0.352140 tig0004829:-42954 Msa1341490:CDS
TGAGCTTTAGTGTATTCTTC+AGG 0.353508 tig0004829:+43401 None:intergenic
TCCACATTAGCTTGTATGTT+AGG 0.356001 tig0004829:+43373 None:intergenic
GATGCAACAGACGGAGGGGC+AGG 0.359769 tig0004829:+43514 None:intergenic
TCAATTCAAAATCAGATAAA+GGG 0.362374 tig0004829:-44354 Msa1341490:five_prime_UTR
GGTGGTTCGTTACTCCGATT+TGG 0.367502 tig0004829:-44172 Msa1341490:CDS
GAGAAGTGGAATGTTTCGTT+TGG 0.373506 tig0004829:-43460 Msa1341490:CDS
ATTGAGATTGAGATTGAGAT+TGG 0.377366 tig0004829:-44323 Msa1341490:five_prime_UTR
TCATCATCTCGAGGAATAAT+AGG 0.380344 tig0004829:+42350 None:intergenic
CAATGGCCTTTGTACGCAAA+AGG 0.381816 tig0004829:+43491 None:intergenic
AGTTAATGTCCTTGAGTGTT+GGG 0.381948 tig0004829:-43558 Msa1341490:CDS
TGCAAAACTTGCTAAAATTC+GGG 0.384462 tig0004829:-42168 Msa1341490:CDS
GCGGGAGCTATACAAACTTC+TGG 0.386282 tig0004829:-43047 Msa1341490:CDS
AGAAGTGGAATGTTTCGTTT+GGG 0.387150 tig0004829:-43459 Msa1341490:CDS
AATTTCTGAATTGAGTGTTC+CGG 0.389243 tig0004829:-42480 Msa1341490:CDS
GGGTTCTCACTTGGATACTT+GGG 0.398806 tig0004829:-42597 Msa1341490:CDS
CATTACAGACAGCTTAGATT+AGG 0.400928 tig0004829:-43433 Msa1341490:CDS
GATTGGATCTTGAAAGTCAT+TGG 0.404975 tig0004829:-42541 Msa1341490:CDS
GACAAAGAGAAGTAGTAGTT+TGG 0.405051 tig0004829:-41698 Msa1341490:three_prime_UTR
CCATCTTACCACAGGAGCTT+TGG 0.407101 tig0004829:+42619 None:intergenic
GCCGTGCTCCTTTGAGAAAA+GGG 0.408275 tig0004829:-42418 Msa1341490:CDS
ACAGACGGAGGGGCAGGGAG+CGG 0.413891 tig0004829:+43520 None:intergenic
TGCCGTGCTCCTTTGAGAAA+AGG 0.415320 tig0004829:-42419 Msa1341490:CDS
CTTGGTTTCCATTCAAGAAT+GGG 0.416261 tig0004829:-43014 Msa1341490:CDS
AAGCTAATGTGGAGAGGATT+CGG 0.418840 tig0004829:-43363 Msa1341490:CDS
AACACTGACAGCCTACTTCA+TGG 0.429399 tig0004829:-42686 Msa1341490:CDS
CCAAAGCTCCTGTGGTAAGA+TGG 0.429788 tig0004829:-42619 Msa1341490:CDS
TAAACTCATCAAAACTTGAC+GGG 0.431421 tig0004829:-42862 Msa1341490:CDS
ACTTGGTTTCCATTCAAGAA+TGG 0.435377 tig0004829:-43015 Msa1341490:CDS
TATGGCCAACCAGCGGGGAT+TGG 0.436674 tig0004829:-42558 Msa1341490:CDS
ATTGGATCTTGAAAGTCATT+GGG 0.440525 tig0004829:-42540 Msa1341490:CDS
TGGGAAGTTGATGCCACGTC+AGG 0.445034 tig0004829:+42761 None:intergenic
ATGGAAAAGGAGCGAAGGTT+AGG 0.446317 tig0004829:-44266 Msa1341490:CDS
CTAAACTCATCAAAACTTGA+CGG 0.453308 tig0004829:-42863 Msa1341490:CDS
CACACCAGATGGGGTTTCAA+TGG 0.456189 tig0004829:+42805 None:intergenic
GGAATAATAGGTCCATGAAA+TGG 0.457015 tig0004829:+42362 None:intergenic
GAAGAAGGCGAAAGAGAAGA+AGG 0.458533 tig0004829:-44291 Msa1341490:CDS
CAGTTAATGTCCTTGAGTGT+TGG 0.460515 tig0004829:-43559 Msa1341490:CDS
ATGCAACAGACGGAGGGGCA+GGG 0.465331 tig0004829:+43515 None:intergenic
CATGTTGCTATCTGCAAAGC+AGG 0.471252 tig0004829:+41537 None:intergenic
CAAAGCTCCTGTGGTAAGAT+GGG 0.471408 tig0004829:-42618 Msa1341490:CDS
AGGAGCAATTGAGCACGAAA+TGG 0.472494 tig0004829:-44403 Msa1341490:five_prime_UTR
AGATTAATTAGGATCAGTTA+AGG 0.476107 tig0004829:-41720 Msa1341490:three_prime_UTR
TAGCTAGCATTTGTCAATTG+AGG 0.481234 tig0004829:-41966 Msa1341490:three_prime_UTR
TCAAAGGAGCACGGCATGGT+TGG 0.482748 tig0004829:+42426 None:intergenic
AAAGGGATGCAACAGACGGA+GGG 0.483326 tig0004829:+43509 None:intergenic
TTGTCTGATGACTGATTGCT+CGG 0.485123 tig0004829:-41886 Msa1341490:three_prime_UTR
ACCAATTATTTGAACTGAGA+GGG 0.485433 tig0004829:-41800 Msa1341490:three_prime_UTR
AATTCAGAAATTATATCTGA+TGG 0.490481 tig0004829:+42491 None:intergenic
AATAAATTTGCAACATCCAC+AGG 0.493886 tig0004829:+41574 None:intergenic
ACACTGACAGCCTACTTCAT+GGG 0.496310 tig0004829:-42685 Msa1341490:CDS
AGATTGAGATTGGATAGGTA+TGG 0.496541 tig0004829:-44313 Msa1341490:exon
AGAGAAGAAGGGAATGGAAA+AGG 0.500826 tig0004829:-44279 Msa1341490:CDS
GGCGAAAGAGAAGAAGGGAA+TGG 0.503524 tig0004829:-44285 Msa1341490:CDS
AACAGAAACCCATTCTTGAA+TGG 0.505019 tig0004829:+43006 None:intergenic
CGTCGTGAAGCATTGAATGA+AGG 0.506233 tig0004829:-43118 Msa1341490:CDS
AGCAAGTCGGAGCTCCAAAT+CGG 0.507757 tig0004829:+44158 None:intergenic
AATGGCCTTTGTACGCAAAA+GGG 0.509485 tig0004829:+43492 None:intergenic
ATTATTCCTCGAGATGATGA+AGG 0.512319 tig0004829:-42347 Msa1341490:CDS
GGTGATGTAGCGCGCAAGTA+AGG 0.516224 tig0004829:-44423 Msa1341490:five_prime_UTR
AGAGGATTCGGCAAGAGAGA+AGG 0.518182 tig0004829:-43351 Msa1341490:CDS
GGTAAGATGGGGTTCTCACT+TGG 0.521435 tig0004829:-42606 Msa1341490:CDS
GTCAAAAGTTTACTCCTCAG+AGG 0.527239 tig0004829:+42641 None:intergenic
CGTCAATTATTTGGAGTGCA+AGG 0.528658 tig0004829:+43635 None:intergenic
TCTACGATGGAGGAGATTGA+TGG 0.530605 tig0004829:-43241 Msa1341490:CDS
TATTATCAGGCACACCAGAT+GGG 0.532703 tig0004829:+42795 None:intergenic
ACTTCTGGTGACAAAGCACT+TGG 0.540008 tig0004829:-43032 Msa1341490:CDS
AGGAGGCGGTGATCGACATC+CGG 0.540708 tig0004829:+44210 None:intergenic
CTCATCATCTTCTCCAAAAG+CGG 0.546653 tig0004829:+42091 None:intergenic
GAGGATTCGGCAAGAGAGAA+GGG 0.547375 tig0004829:-43350 Msa1341490:CDS
GTCGTGAAGCATTGAATGAA+GGG 0.550115 tig0004829:-43117 Msa1341490:CDS
TTAACATTCATGTCTTCTGA+AGG 0.550553 tig0004829:+42305 None:intergenic
TTATTATCAGGCACACCAGA+TGG 0.551120 tig0004829:+42794 None:intergenic
GATTGAGATTGAGATTGGAT+AGG 0.553857 tig0004829:-44318 Msa1341490:five_prime_UTR
AAGAAGGCGAAAGAGAAGAA+GGG 0.554761 tig0004829:-44290 Msa1341490:CDS
AGAGAAGGGAGAGGGAGATG+AGG 0.558791 tig0004829:-43336 Msa1341490:CDS
AAAAGGGATGCAACAGACGG+AGG 0.562638 tig0004829:+43508 None:intergenic
GGTTCTCACTTGGATACTTG+GGG 0.562903 tig0004829:-42596 Msa1341490:CDS
CTTAGACGATGAAGAGCTTG+AGG 0.566022 tig0004829:-43170 Msa1341490:CDS
TCAAAAGTTTACTCCTCAGA+GGG 0.569727 tig0004829:+42642 None:intergenic
CACTGACAGCCTACTTCATG+GGG 0.569874 tig0004829:-42684 Msa1341490:CDS
GTATCCATTGAAACCCCATC+TGG 0.569924 tig0004829:-42809 Msa1341490:CDS
GGCAACAAATTCCACCGCAC+CGG 0.571423 tig0004829:-44229 Msa1341490:CDS
GTGATCGACATCCGGTGCGG+TGG 0.573761 tig0004829:+44218 None:intergenic
ATCTTGAAAGTCATTGGGGT+AGG 0.574477 tig0004829:-42535 Msa1341490:CDS
TTCGGCAAGAGAGAAGGGAG+AGG 0.578002 tig0004829:-43345 Msa1341490:CDS
TAATTGGTCTCATGATCCAC+AGG 0.578648 tig0004829:+41815 None:intergenic
GACCAATTATTTGAACTGAG+AGG 0.582856 tig0004829:-41801 Msa1341490:three_prime_UTR
TTTCAAGATCCAATCCCCGC+TGG 0.583117 tig0004829:+42549 None:intergenic
AAGATCCAATCCCCGCTGGT+TGG 0.583660 tig0004829:+42553 None:intergenic
GGATACTTGGGGTTCAAACA+AGG 0.586225 tig0004829:-42585 Msa1341490:CDS
TCGCCGAAACCCAACACTCA+AGG 0.592782 tig0004829:+43549 None:intergenic
CGCAAAAGGGATGCAACAGA+CGG 0.595656 tig0004829:+43505 None:intergenic
AGGGAATGGAAAAGGAGCGA+AGG 0.595700 tig0004829:-44271 Msa1341490:CDS
TCCTAACATACAAGCTAATG+TGG 0.595760 tig0004829:-43374 Msa1341490:CDS
TTATGAAAGCAGTGATAACA+AGG 0.597508 tig0004829:-43086 Msa1341490:CDS
TCTTGAAAGTCATTGGGGTA+GGG 0.598282 tig0004829:-42534 Msa1341490:CDS
GATTGGATAGGTATGGAAGA+AGG 0.598556 tig0004829:-44306 Msa1341490:exon
ATTATCAGGCACACCAGATG+GGG 0.602798 tig0004829:+42796 None:intergenic
CATGAAGCGTGATCACTCCC+AGG 0.603510 tig0004829:-44115 Msa1341490:intron
CCTCCTCAAAGCAATCAAAA+CGG 0.603835 tig0004829:-44193 Msa1341490:CDS
TTTCTCAAAGGAGCACGGCA+TGG 0.606475 tig0004829:+42422 None:intergenic
TGTTCGTGAAACAGACAAGA+AGG 0.608437 tig0004829:-42231 Msa1341490:CDS
CCAATTATTTGAACTGAGAG+GGG 0.608650 tig0004829:-41799 Msa1341490:three_prime_UTR
TTTGAGTAAAGCCTTGCCTG+TGG 0.609433 tig0004829:-41831 Msa1341490:three_prime_UTR
CCGTGCTCCTTTGAGAAAAG+GGG 0.616217 tig0004829:-42417 Msa1341490:CDS
AGCTTCCCTTCATCATCTCG+AGG 0.617559 tig0004829:+42341 None:intergenic
TTATTCCTCGAGATGATGAA+GGG 0.619534 tig0004829:-42346 Msa1341490:CDS
TGTCTGATGACTGATTGCTC+GGG 0.626167 tig0004829:-41885 Msa1341490:three_prime_UTR
GAAGTGGAATGTTTCGTTTG+GGG 0.626587 tig0004829:-43458 Msa1341490:CDS
TGAGAACCCCATCTTACCAC+AGG 0.626927 tig0004829:+42611 None:intergenic
AGAGATACTGTCTACGATGG+AGG 0.627724 tig0004829:-43251 Msa1341490:CDS
ACAATTTCACAGAAAATGTG+AGG 0.635813 tig0004829:+41645 None:intergenic
TCGGCAAGAGAGAAGGGAGA+GGG 0.636680 tig0004829:-43344 Msa1341490:CDS
GGGAGAGATACTGTCTACGA+TGG 0.642323 tig0004829:-43254 Msa1341490:CDS
CGTGCTCCTTTGAGAAAAGG+GGG 0.646992 tig0004829:-42416 Msa1341490:CDS
CTACGATGGAGGAGATTGAT+GGG 0.647781 tig0004829:-43240 Msa1341490:CDS
TGGCAATTGATGTTGTCCTG+TGG 0.647996 tig0004829:-41590 Msa1341490:three_prime_UTR
GGTCTCATGATCCACAGGCA+AGG 0.649521 tig0004829:+41820 None:intergenic
TTAAGGTTTGAGAAGCAAGT+CGG 0.651226 tig0004829:+44145 None:intergenic
TCGTGAAGCATTGAATGAAG+GGG 0.651545 tig0004829:-43116 Msa1341490:CDS
AAAGCTCCTGTGGTAAGATG+GGG 0.652782 tig0004829:-42617 Msa1341490:CDS
AAGGGATGCAACAGACGGAG+GGG 0.656411 tig0004829:+43510 None:intergenic
AATCAGAGTCAAACCCTCTG+AGG 0.661720 tig0004829:-42655 Msa1341490:CDS
CAATTATTTGAACTGAGAGG+GGG 0.663885 tig0004829:-41798 Msa1341490:three_prime_UTR
AATATGAGTAGTGATAAACT+TGG 0.665201 tig0004829:-42737 Msa1341490:CDS
ACATACAAGCTAATGTGGAG+AGG 0.665961 tig0004829:-43369 Msa1341490:CDS
TTGGATCTTGAAAGTCATTG+GGG 0.668632 tig0004829:-42539 Msa1341490:CDS
AAACTCATCAAAACTTGACG+GGG 0.674187 tig0004829:-42861 Msa1341490:CDS
CCTCAAAGCAATCAAAACGG+TGG 0.690187 tig0004829:-44190 Msa1341490:CDS
TCGTGAAACAGACAAGAAGG+TGG 0.730580 tig0004829:-42228 Msa1341490:CDS
ACTGACAGCCTACTTCATGG+GGG 0.785079 tig0004829:-42683 Msa1341490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATATGTATAAATAAATTT+AGG - tig0004829:41579-41598 Msa1341490:three_prime_UTR 10.0%
!! AAGAATTAAATAAAATACCT+GGG + tig0004829:41865-41884 None:intergenic 15.0%
!!! TTTTTTTAACTGATTTAACA+CGG + tig0004829:43051-43070 None:intergenic 15.0%
!! TTCAATTCAAAATCAGATAA+AGG - tig0004829:41605-41624 Msa1341490:three_prime_UTR 20.0%
!! TCAATTCAAAATCAGATAAA+GGG - tig0004829:41606-41625 Msa1341490:three_prime_UTR 20.0%
!! GAAGAATTAAATAAAATACC+TGG + tig0004829:41866-41885 None:intergenic 20.0%
!!! ATCAAAAAATTGCTTTTGTT+TGG - tig0004829:42009-42028 Msa1341490:CDS 20.0%
!! AAAACTATATCAAAGGTAAT+AGG - tig0004829:42165-42184 Msa1341490:CDS 20.0%
!! AGTTGATTATATCTACAATA+AGG + tig0004829:42218-42237 None:intergenic 20.0%
!!! AGAGAAATTTTCTTCAATAA+AGG - tig0004829:42685-42704 Msa1341490:CDS 20.0%
!!! GAGAAATTTTCTTCAATAAA+GGG - tig0004829:42686-42705 Msa1341490:CDS 20.0%
!!! TTTATCACTACTCATATTTT+GGG + tig0004829:43221-43240 None:intergenic 20.0%
!! AATTCAGAAATTATATCTGA+TGG + tig0004829:43472-43491 None:intergenic 20.0%
!!! TTTATCAATTTCTCTTTTCT+TGG + tig0004829:43758-43777 None:intergenic 20.0%
!! TGTAAGGAAAAATAAATGAA+TGG + tig0004829:44203-44222 None:intergenic 20.0%
! TTTGATTCTTATAATTGCCA+CGG - tig0004829:41915-41934 Msa1341490:three_prime_UTR 25.0%
!! ATGTTGAATTCTTTGGATTT+TGG - tig0004829:41941-41960 Msa1341490:three_prime_UTR 25.0%
!! GTACAAAAGCAATTTTATGA+TGG + tig0004829:42040-42059 None:intergenic 25.0%
! TCTAAGGAAAACTATATCAA+AGG - tig0004829:42158-42177 Msa1341490:CDS 25.0%
! ATCAGTTAAAAAAAGATGTG+AGG - tig0004829:43057-43076 Msa1341490:CDS 25.0%
!!! GGATGTTTGTTTTTATTATC+AGG + tig0004829:43181-43200 None:intergenic 25.0%
!! GTTTATCACTACTCATATTT+TGG + tig0004829:43222-43241 None:intergenic 25.0%
! AATATGAGTAGTGATAAACT+TGG - tig0004829:43223-43242 Msa1341490:CDS 25.0%
!!! TCAATTTGCTTTTCTTCATA+AGG + tig0004829:43511-43530 None:intergenic 25.0%
! ATGAAAATTTGTCCATTTCA+TGG - tig0004829:43586-43605 Msa1341490:CDS 25.0%
! GAAAAGAGAAATTGATAAAC+AGG - tig0004829:43759-43778 Msa1341490:intron 25.0%
!!! TCAGTTAACTTGTATGATTT+TGG - tig0004829:44045-44064 Msa1341490:intron 25.0%
! CCTAAGAAAAAATAACTGTA+AGG + tig0004829:44219-44238 None:intergenic 25.0%
!!! CCTTACAGTTATTTTTTCTT+AGG - tig0004829:44216-44235 Msa1341490:CDS 25.0%
!! TTTTCTTAGGCAGATTAATT+AGG - tig0004829:44229-44248 Msa1341490:CDS 25.0%
! AGATTAATTAGGATCAGTTA+AGG - tig0004829:44240-44259 Msa1341490:CDS 25.0%
!!! GTGAAATTGTTTTGTATAGT+AGG - tig0004829:44328-44347 Msa1341490:five_prime_UTR 25.0%
ATTGAGATTGAGATTGAGAT+TGG - tig0004829:41637-41656 Msa1341490:three_prime_UTR 30.0%
!! GGTTAGGTTTTTGATTGAAA+AGG - tig0004829:41710-41729 Msa1341490:three_prime_UTR 30.0%
ATCATGAAACTATACAAGAG+AGG - tig0004829:41982-42001 Msa1341490:exon 30.0%
TCATGAAACTATACAAGAGA+GGG - tig0004829:41983-42002 Msa1341490:exon 30.0%
CTAAAAGCGATTTCAACAAT+AGG - tig0004829:42072-42091 Msa1341490:CDS 30.0%
TCAATTTAGACGACTATCTA+AGG - tig0004829:42142-42161 Msa1341490:CDS 30.0%
TAGGATGAGAGAATAAATGA+TGG - tig0004829:42184-42203 Msa1341490:CDS 30.0%
ATATCAATCCATGTCAACAA+GGG + tig0004829:42288-42307 None:intergenic 30.0%
!! ATTGATATGTGTTTCAGGTT+AGG - tig0004829:42300-42319 Msa1341490:CDS 30.0%
TGAAGAGTTCGTCAATTATT+TGG + tig0004829:42337-42356 None:intergenic 30.0%
! TACAAAGGCCATTGAATTTT+TGG - tig0004829:42478-42497 Msa1341490:CDS 30.0%
! AGACATTTTGCATTCAAAAC+AGG - tig0004829:42748-42767 Msa1341490:CDS 30.0%
TTATGAAAGCAGTGATAACA+AGG - tig0004829:42874-42893 Msa1341490:CDS 30.0%
ATTCAGAGATTCTACTTTGA+AGG - tig0004829:43006-43025 Msa1341490:CDS 30.0%
!! TAACTGATTTAACACGGTTT+TGG + tig0004829:43045-43064 None:intergenic 30.0%
AGTTAAAAAAAGATGTGAGG+AGG - tig0004829:43060-43079 Msa1341490:CDS 30.0%
CTAAACTCATCAAAACTTGA+CGG - tig0004829:43097-43116 Msa1341490:CDS 30.0%
TAAACTCATCAAAACTTGAC+GGG - tig0004829:43098-43117 Msa1341490:CDS 30.0%
ATTGGATCTTGAAAGTCATT+GGG - tig0004829:43420-43439 Msa1341490:CDS 30.0%
AATTTCTGAATTGAGTGTTC+CGG - tig0004829:43480-43499 Msa1341490:CDS 30.0%
TTAACATTCATGTCTTCTGA+AGG + tig0004829:43658-43677 None:intergenic 30.0%
!! GTGCAAAACTTGCTAAAATT+CGG - tig0004829:43791-43810 Msa1341490:intron 30.0%
!! TGCAAAACTTGCTAAAATTC+GGG - tig0004829:43792-43811 Msa1341490:intron 30.0%
! AACACAATGATGCAGTTTTA+CGG - tig0004829:43815-43834 Msa1341490:intron 30.0%
ACCAATTATTTGAACTGAGA+GGG - tig0004829:44160-44179 Msa1341490:CDS 30.0%
ACAATTTCACAGAAAATGTG+AGG + tig0004829:44318-44337 None:intergenic 30.0%
AATAAATTTGCAACATCCAC+AGG + tig0004829:44389-44408 None:intergenic 30.0%
GATTGAGATTGAGATTGGAT+AGG - tig0004829:41642-41661 Msa1341490:three_prime_UTR 35.0%
AGATTGAGATTGGATAGGTA+TGG - tig0004829:41647-41666 Msa1341490:three_prime_UTR 35.0%
TTAAGGTTTGAGAAGCAAGT+CGG + tig0004829:41818-41837 None:intergenic 35.0%
ACTTGCTTCTCAAACCTTAA+TGG - tig0004829:41818-41837 Msa1341490:three_prime_UTR 35.0%
ATTCTTCTCGCTCTCTAATT+AGG - tig0004829:41879-41898 Msa1341490:three_prime_UTR 35.0%
TTCTTCTCGCTCTCTAATTA+GGG - tig0004829:41880-41899 Msa1341490:three_prime_UTR 35.0%
!! TCAACAAGGGGGTTTTATAT+TGG + tig0004829:42275-42294 None:intergenic 35.0%
TATCAATCCATGTCAACAAG+GGG + tig0004829:42287-42306 None:intergenic 35.0%
CATATCAATCCATGTCAACA+AGG + tig0004829:42289-42308 None:intergenic 35.0%
! CATGGATTGATATGTGTTTC+AGG - tig0004829:42295-42314 Msa1341490:CDS 35.0%
! TCATGCGATCAAAGCTTTTT+AGG - tig0004829:42354-42373 Msa1341490:CDS 35.0%
AGTTAATGTCCTTGAGTGTT+GGG - tig0004829:42402-42421 Msa1341490:CDS 35.0%
CCACTTCTCCAAAAATTCAA+TGG + tig0004829:42489-42508 None:intergenic 35.0%
!! CCATTGAATTTTTGGAGAAG+TGG - tig0004829:42486-42505 Msa1341490:CDS 35.0%
AGAAGTGGAATGTTTCGTTT+GGG - tig0004829:42501-42520 Msa1341490:CDS 35.0%
CATTACAGACAGCTTAGATT+AGG - tig0004829:42527-42546 Msa1341490:CDS 35.0%
! TGAGCTTTAGTGTATTCTTC+AGG + tig0004829:42562-42581 None:intergenic 35.0%
TCCTAACATACAAGCTAATG+TGG - tig0004829:42586-42605 Msa1341490:CDS 35.0%
!! TCCACATTAGCTTGTATGTT+AGG + tig0004829:42590-42609 None:intergenic 35.0%
! AGGTAGTTTTTGATGCATTG+CGG - tig0004829:42894-42913 Msa1341490:CDS 35.0%
ACTTGGTTTCCATTCAAGAA+TGG - tig0004829:42945-42964 Msa1341490:CDS 35.0%
CTTGGTTTCCATTCAAGAAT+GGG - tig0004829:42946-42965 Msa1341490:CDS 35.0%
AACAGAAACCCATTCTTGAA+TGG + tig0004829:42957-42976 None:intergenic 35.0%
AAACTCATCAAAACTTGACG+GGG - tig0004829:43099-43118 Msa1341490:CDS 35.0%
TAAAAACAAACATCCTGACG+TGG - tig0004829:43186-43205 Msa1341490:CDS 35.0%
TCAAAAGTTTACTCCTCAGA+GGG + tig0004829:43321-43340 None:intergenic 35.0%
! GGGTTCAAACAAGGTTTTTA+TGG - tig0004829:43384-43403 Msa1341490:CDS 35.0%
GATTGGATCTTGAAAGTCAT+TGG - tig0004829:43419-43438 Msa1341490:CDS 35.0%
TTGGATCTTGAAAGTCATTG+GGG - tig0004829:43421-43440 Msa1341490:CDS 35.0%
!!! TTTTCTTCATAAGGCATTGC+CGG + tig0004829:43502-43521 None:intergenic 35.0%
GGAATAATAGGTCCATGAAA+TGG + tig0004829:43601-43620 None:intergenic 35.0%
TCATCATCTCGAGGAATAAT+AGG + tig0004829:43613-43632 None:intergenic 35.0%
ATTATTCCTCGAGATGATGA+AGG - tig0004829:43613-43632 Msa1341490:CDS 35.0%
TTATTCCTCGAGATGATGAA+GGG - tig0004829:43614-43633 Msa1341490:CDS 35.0%
! ACACAATGATGCAGTTTTAC+GGG - tig0004829:43816-43835 Msa1341490:intron 35.0%
!!! CGTTACTTTCTTTTTCAGCA+TGG + tig0004829:43929-43948 None:intergenic 35.0%
TAGCTAGCATTTGTCAATTG+AGG - tig0004829:43994-44013 Msa1341490:intron 35.0%
GACCAATTATTTGAACTGAG+AGG - tig0004829:44159-44178 Msa1341490:CDS 35.0%
CCAATTATTTGAACTGAGAG+GGG - tig0004829:44161-44180 Msa1341490:CDS 35.0%
CAATTATTTGAACTGAGAGG+GGG - tig0004829:44162-44181 Msa1341490:CDS 35.0%
GACAAAGAGAAGTAGTAGTT+TGG - tig0004829:44262-44281 Msa1341490:CDS 35.0%
! TTGCCAAGTTTTTAATCCTC+TGG + tig0004829:44356-44375 None:intergenic 35.0%
GATTGGATAGGTATGGAAGA+AGG - tig0004829:41654-41673 Msa1341490:three_prime_UTR 40.0%
AAGAAGGCGAAAGAGAAGAA+GGG - tig0004829:41670-41689 Msa1341490:three_prime_UTR 40.0%
AGAGAAGAAGGGAATGGAAA+AGG - tig0004829:41681-41700 Msa1341490:three_prime_UTR 40.0%
!!! TTTTGATTGCTTTGAGGAGG+CGG + tig0004829:41767-41786 None:intergenic 40.0%
CCTCCTCAAAGCAATCAAAA+CGG - tig0004829:41767-41786 Msa1341490:three_prime_UTR 40.0%
ACGCTTCATGAGATCCATTA+AGG + tig0004829:41835-41854 None:intergenic 40.0%
AAAGAATTCAACATCGACCG+TGG + tig0004829:41935-41954 None:intergenic 40.0%
ACGGTCGATGTTGAATTCTT+TGG - tig0004829:41934-41953 Msa1341490:three_prime_UTR 40.0%
!! AGGGGGTTTTATATTGGACA+TGG + tig0004829:42269-42288 None:intergenic 40.0%
ATAAAACCCCCTTGTTGACA+TGG - tig0004829:42277-42296 Msa1341490:CDS 40.0%
ATCAATCCATGTCAACAAGG+GGG + tig0004829:42286-42305 None:intergenic 40.0%
! CGTCAATTATTTGGAGTGCA+AGG + tig0004829:42328-42347 None:intergenic 40.0%
GACTCTCATTGTTGAGAGTT+TGG - tig0004829:42376-42395 Msa1341490:CDS 40.0%
CAGTTAATGTCCTTGAGTGT+TGG - tig0004829:42401-42420 Msa1341490:CDS 40.0%
AATGGCCTTTGTACGCAAAA+GGG + tig0004829:42471-42490 None:intergenic 40.0%
GAGAAGTGGAATGTTTCGTT+TGG - tig0004829:42500-42519 Msa1341490:CDS 40.0%
GAAGTGGAATGTTTCGTTTG+GGG - tig0004829:42502-42521 Msa1341490:CDS 40.0%
ACATACAAGCTAATGTGGAG+AGG - tig0004829:42591-42610 Msa1341490:CDS 40.0%
AAGCTAATGTGGAGAGGATT+CGG - tig0004829:42597-42616 Msa1341490:CDS 40.0%
!! GTCGTGAAGCATTGAATGAA+GGG - tig0004829:42843-42862 Msa1341490:CDS 40.0%
!! TCGTGAAGCATTGAATGAAG+GGG - tig0004829:42844-42863 Msa1341490:CDS 40.0%
! GGTAGTTTTTGATGCATTGC+GGG - tig0004829:42895-42914 Msa1341490:CDS 40.0%
! TCAAGAATGGGTTTCTGTTC+TGG - tig0004829:42958-42977 Msa1341490:CDS 40.0%
AAAAAAAGATGTGAGGAGGC+AGG - tig0004829:43064-43083 Msa1341490:CDS 40.0%
! TTGACGGGGAAGAAGATTTT+TGG - tig0004829:43113-43132 Msa1341490:CDS 40.0%
! TGACGGGGAAGAAGATTTTT+GGG - tig0004829:43114-43133 Msa1341490:CDS 40.0%
!! GAAGAAGATTTTTGGGAGGA+GGG - tig0004829:43121-43140 Msa1341490:CDS 40.0%
!! AAGAAGATTTTTGGGAGGAG+GGG - tig0004829:43122-43141 Msa1341490:CDS 40.0%
TATTATCAGGCACACCAGAT+GGG + tig0004829:43168-43187 None:intergenic 40.0%
TTATTATCAGGCACACCAGA+TGG + tig0004829:43169-43188 None:intergenic 40.0%
! ATTGATTTCCCCCATGAAGT+AGG + tig0004829:43288-43307 None:intergenic 40.0%
GTCAAAAGTTTACTCCTCAG+AGG + tig0004829:43322-43341 None:intergenic 40.0%
ATCTTGAAAGTCATTGGGGT+AGG - tig0004829:43425-43444 Msa1341490:CDS 40.0%
TCTTGAAAGTCATTGGGGTA+GGG - tig0004829:43426-43445 Msa1341490:CDS 40.0%
TGTTCGTGAAACAGACAAGA+AGG - tig0004829:43729-43748 Msa1341490:intron 40.0%
CTCATCATCTTCTCCAAAAG+CGG + tig0004829:43872-43891 None:intergenic 40.0%
!!! CTCAGAAGCTTTTGAGTTCA+CGG - tig0004829:43965-43984 Msa1341490:intron 40.0%
!!! TCAGAAGCTTTTGAGTTCAC+GGG - tig0004829:43966-43985 Msa1341490:intron 40.0%
TTGTCTGATGACTGATTGCT+CGG - tig0004829:44074-44093 Msa1341490:intron 40.0%
! TAATTGGTCTCATGATCCAC+AGG + tig0004829:44148-44167 None:intergenic 40.0%
CCCCTCTCAGTTCAAATAAT+TGG + tig0004829:44164-44183 None:intergenic 40.0%
! TTTTGTATAGTAGGTGCCAG+AGG - tig0004829:44337-44356 Msa1341490:five_prime_UTR 40.0%
GTGCCAGAGGATTAAAAACT+TGG - tig0004829:44350-44369 Msa1341490:five_prime_UTR 40.0%
AGGAGCAATTGAGCACGAAA+TGG - tig0004829:41557-41576 Msa1341490:three_prime_UTR 45.0%
GAAGAAGGCGAAAGAGAAGA+AGG - tig0004829:41669-41688 Msa1341490:three_prime_UTR 45.0%
ATGGAAAAGGAGCGAAGGTT+AGG - tig0004829:41694-41713 Msa1341490:three_prime_UTR 45.0%
!!! CCGTTTTGATTGCTTTGAGG+AGG + tig0004829:41770-41789 None:intergenic 45.0%
!!! CCACCGTTTTGATTGCTTTG+AGG + tig0004829:41773-41792 None:intergenic 45.0%
CCTCAAAGCAATCAAAACGG+TGG - tig0004829:41770-41789 Msa1341490:three_prime_UTR 45.0%
!! TGTCCTTGAGTGTTGGGTTT+CGG - tig0004829:42408-42427 Msa1341490:CDS 45.0%
! TGCATCCCTTTTGCGTACAA+AGG - tig0004829:42463-42482 Msa1341490:CDS 45.0%
CAATGGCCTTTGTACGCAAA+AGG + tig0004829:42472-42491 None:intergenic 45.0%
AGAGATACTGTCTACGATGG+AGG - tig0004829:42709-42728 Msa1341490:CDS 45.0%
TCTACGATGGAGGAGATTGA+TGG - tig0004829:42719-42738 Msa1341490:CDS 45.0%
CTACGATGGAGGAGATTGAT+GGG - tig0004829:42720-42739 Msa1341490:CDS 45.0%
CTTAGACGATGAAGAGCTTG+AGG - tig0004829:42790-42809 Msa1341490:CDS 45.0%
!! CGTCGTGAAGCATTGAATGA+AGG - tig0004829:42842-42861 Msa1341490:CDS 45.0%
! ACTTCTGGTGACAAAGCACT+TGG - tig0004829:42928-42947 Msa1341490:CDS 45.0%
!! GGAAGAAGATTTTTGGGAGG+AGG - tig0004829:43120-43139 Msa1341490:CDS 45.0%
GTATCCATTGAAACCCCATC+TGG - tig0004829:43151-43170 Msa1341490:CDS 45.0%
ATTATCAGGCACACCAGATG+GGG + tig0004829:43167-43186 None:intergenic 45.0%
AACACTGACAGCCTACTTCA+TGG - tig0004829:43274-43293 Msa1341490:CDS 45.0%
ACACTGACAGCCTACTTCAT+GGG - tig0004829:43275-43294 Msa1341490:CDS 45.0%
AATCAGAGTCAAACCCTCTG+AGG - tig0004829:43305-43324 Msa1341490:CDS 45.0%
! ACTTTTGACCAAAGCTCCTG+TGG - tig0004829:43333-43352 Msa1341490:CDS 45.0%
CAAAGCTCCTGTGGTAAGAT+GGG - tig0004829:43342-43361 Msa1341490:CDS 45.0%
AAAGCTCCTGTGGTAAGATG+GGG - tig0004829:43343-43362 Msa1341490:CDS 45.0%
GGGTTCTCACTTGGATACTT+GGG - tig0004829:43363-43382 Msa1341490:CDS 45.0%
GGTTCTCACTTGGATACTTG+GGG - tig0004829:43364-43383 Msa1341490:CDS 45.0%
GGATACTTGGGGTTCAAACA+AGG - tig0004829:43375-43394 Msa1341490:CDS 45.0%
! AGGTTTTTATGGCCAACCAG+CGG - tig0004829:43395-43414 Msa1341490:CDS 45.0%
TCGTGAAACAGACAAGAAGG+TGG - tig0004829:43732-43751 Msa1341490:intron 45.0%
! AGTTTTACGGGATGCTGCAT+TGG - tig0004829:43828-43847 Msa1341490:intron 45.0%
!! ACTTCAAGATCAGCCGCTTT+TGG - tig0004829:43856-43875 Msa1341490:intron 45.0%
!! CGCTTTTGGAGAAGATGATG+AGG - tig0004829:43870-43889 Msa1341490:intron 45.0%
TGTCTGATGACTGATTGCTC+GGG - tig0004829:44075-44094 Msa1341490:intron 45.0%
TTTGAGTAAAGCCTTGCCTG+TGG - tig0004829:44129-44148 Msa1341490:CDS 45.0%
TTATTTGAACTGAGAGGGGG+AGG - tig0004829:44165-44184 Msa1341490:CDS 45.0%
TATTTGAACTGAGAGGGGGA+GGG - tig0004829:44166-44185 Msa1341490:CDS 45.0%
TGGCAATTGATGTTGTCCTG+TGG - tig0004829:44370-44389 Msa1341490:five_prime_UTR 45.0%
!! AATATGTATAAATAAATTTA+GGG - tig0004829:41580-41599 Msa1341490:three_prime_UTR 5.0%
GGCGAAAGAGAAGAAGGGAA+TGG - tig0004829:41675-41694 Msa1341490:three_prime_UTR 50.0%
AGGGAATGGAAAAGGAGCGA+AGG - tig0004829:41689-41708 Msa1341490:three_prime_UTR 50.0%
GGTGGTTCGTTACTCCGATT+TGG - tig0004829:41788-41807 Msa1341490:three_prime_UTR 50.0%
AGCAAGTCGGAGCTCCAAAT+CGG + tig0004829:41805-41824 None:intergenic 50.0%
AAAGGGATGCAACAGACGGA+GGG + tig0004829:42454-42473 None:intergenic 50.0%
AAAAGGGATGCAACAGACGG+AGG + tig0004829:42455-42474 None:intergenic 50.0%
CGCAAAAGGGATGCAACAGA+CGG + tig0004829:42458-42477 None:intergenic 50.0%
AGAGGATTCGGCAAGAGAGA+AGG - tig0004829:42609-42628 Msa1341490:CDS 50.0%
GAGGATTCGGCAAGAGAGAA+GGG - tig0004829:42610-42629 Msa1341490:CDS 50.0%
GGGAGAGATACTGTCTACGA+TGG - tig0004829:42706-42725 Msa1341490:CDS 50.0%
GCTTGAGGACTTTCGCTCTT+TGG - tig0004829:42805-42824 Msa1341490:CDS 50.0%
GCGGGAGCTATACAAACTTC+TGG - tig0004829:42913-42932 Msa1341490:CDS 50.0%
!! CGGGGAAGAAGATTTTTGGG+AGG - tig0004829:43117-43136 Msa1341490:CDS 50.0%
CACACCAGATGGGGTTTCAA+TGG + tig0004829:43158-43177 None:intergenic 50.0%
CACTGACAGCCTACTTCATG+GGG - tig0004829:43276-43295 Msa1341490:CDS 50.0%
ACTGACAGCCTACTTCATGG+GGG - tig0004829:43277-43296 Msa1341490:CDS 50.0%
CCATCTTACCACAGGAGCTT+TGG + tig0004829:43344-43363 None:intergenic 50.0%
CCAAAGCTCCTGTGGTAAGA+TGG - tig0004829:43341-43360 Msa1341490:CDS 50.0%
TGAGAACCCCATCTTACCAC+AGG + tig0004829:43352-43371 None:intergenic 50.0%
GGTAAGATGGGGTTCTCACT+TGG - tig0004829:43354-43373 Msa1341490:CDS 50.0%
GGGGTTCTCACTTGGATACT+TGG - tig0004829:43362-43381 Msa1341490:CDS 50.0%
! GGTTTTTATGGCCAACCAGC+GGG - tig0004829:43396-43415 Msa1341490:CDS 50.0%
! GTTTTTATGGCCAACCAGCG+GGG - tig0004829:43397-43416 Msa1341490:CDS 50.0%
TTTCAAGATCCAATCCCCGC+TGG + tig0004829:43414-43433 None:intergenic 50.0%
! TTTCTCAAAGGAGCACGGCA+TGG + tig0004829:43541-43560 None:intergenic 50.0%
! TGCCGTGCTCCTTTGAGAAA+AGG - tig0004829:43541-43560 Msa1341490:CDS 50.0%
! GCCGTGCTCCTTTGAGAAAA+GGG - tig0004829:43542-43561 Msa1341490:CDS 50.0%
! CCCCTTTTCTCAAAGGAGCA+CGG + tig0004829:43546-43565 None:intergenic 50.0%
! CCGTGCTCCTTTGAGAAAAG+GGG - tig0004829:43543-43562 Msa1341490:CDS 50.0%
! CGTGCTCCTTTGAGAAAAGG+GGG - tig0004829:43544-43563 Msa1341490:CDS 50.0%
! CAGAGTCCCCCTTTTCTCAA+AGG + tig0004829:43553-43572 None:intergenic 50.0%
TGAGAAAAGGGGGACTCTGT+CGG - tig0004829:43554-43573 Msa1341490:CDS 50.0%
AGCTTCCCTTCATCATCTCG+AGG + tig0004829:43622-43641 None:intergenic 50.0%
GGCAACAAATTCCACCGCAC+CGG - tig0004829:41731-41750 Msa1341490:three_prime_UTR 55.0%
CATGAAGCGTGATCACTCCC+AGG - tig0004829:41845-41864 Msa1341490:three_prime_UTR 55.0%
TCGCCGAAACCCAACACTCA+AGG + tig0004829:42414-42433 None:intergenic 55.0%
AAGGGATGCAACAGACGGAG+GGG + tig0004829:42453-42472 None:intergenic 55.0%
TTCGGCAAGAGAGAAGGGAG+AGG - tig0004829:42615-42634 Msa1341490:CDS 55.0%
TCGGCAAGAGAGAAGGGAGA+GGG - tig0004829:42616-42635 Msa1341490:CDS 55.0%
AGAGAAGGGAGAGGGAGATG+AGG - tig0004829:42624-42643 Msa1341490:CDS 55.0%
!! TGGGAAGTTGATGCCACGTC+AGG + tig0004829:43202-43221 None:intergenic 55.0%
AAGATCCAATCCCCGCTGGT+TGG + tig0004829:43410-43429 None:intergenic 55.0%
! TCAAAGGAGCACGGCATGGT+TGG + tig0004829:43537-43556 None:intergenic 55.0%
GGTCTCATGATCCACAGGCA+AGG + tig0004829:44143-44162 None:intergenic 55.0%
AGGAGGCGGTGATCGACATC+CGG + tig0004829:41753-41772 None:intergenic 60.0%
ATGCAACAGACGGAGGGGCA+GGG + tig0004829:42448-42467 None:intergenic 60.0%
TATGGCCAACCAGCGGGGAT+TGG - tig0004829:43402-43421 Msa1341490:CDS 60.0%
GTGATCGACATCCGGTGCGG+TGG + tig0004829:41745-41764 None:intergenic 65.0%
GCGGTGATCGACATCCGGTG+CGG + tig0004829:41748-41767 None:intergenic 65.0%
GATGCAACAGACGGAGGGGC+AGG + tig0004829:42449-42468 None:intergenic 65.0%
ACAGACGGAGGGGCAGGGAG+CGG + tig0004829:42443-42462 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0004829 gene 41540 44442 41540 ID=Msa1341490;Name=Msa1341490
tig0004829 mRNA 41540 44442 41540 ID=Msa1341490-mRNA-1;Parent=Msa1341490;Name=Msa1341490-mRNA-1;_AED=0.00;_eAED=0.00;_QI=126|1|1|1|1|1|2|446|626
tig0004829 exon 41540 43665 41540 ID=Msa1341490-mRNA-1:exon:3213;Parent=Msa1341490-mRNA-1
tig0004829 exon 44116 44442 44116 ID=Msa1341490-mRNA-1:exon:3212;Parent=Msa1341490-mRNA-1
tig0004829 five_prime_UTR 44317 44442 44317 ID=Msa1341490-mRNA-1:five_prime_utr;Parent=Msa1341490-mRNA-1
tig0004829 CDS 44116 44316 44116 ID=Msa1341490-mRNA-1:cds;Parent=Msa1341490-mRNA-1
tig0004829 CDS 41986 43665 41986 ID=Msa1341490-mRNA-1:cds;Parent=Msa1341490-mRNA-1
tig0004829 three_prime_UTR 41540 41985 41540 ID=Msa1341490-mRNA-1:three_prime_utr;Parent=Msa1341490-mRNA-1
Gene Sequence

>Msa1341490

ATGGAAGAAGGCGAAAGAGAAGAAGGGAATGGAAAAGGAGCGAAGGTTAGGTTTTTGATTGAAAAGGCAACAAATTCCACCGCACCGGATGTCGATCACCGCCTCCTCAAAGCAATCAAAACGGTGGTTCGTTACTCCGATTTGGAGCTCCGACTTGCTTCTCAAACCTTAATGGATCTCATGAAGCGTGATCACTCCCAGGTTAGGTACCTTGCACTCCAAATAATTGACGAACTCTTCATGCGATCAAAGCTTTTTAGGACTCTCATTGTTGAGAGTTTGGAACAGTTAATGTCCTTGAGTGTTGGGTTTCGGCGAAATTTGCCGCTCCCTGCCCCTCCGTCTGTTGCATCCCTTTTGCGTACAAAGGCCATTGAATTTTTGGAGAAGTGGAATGTTTCGTTTGGGGTTCATTACAGACAGCTTAGATTAGGCTATGATTACCTGAAGAATACACTAAAGCTCAAGTTTCCTAACATACAAGCTAATGTGGAGAGGATTCGGCAAGAGAGAAGGGAGAGGGAGATGAGGTCGAAAGAGATTTTGTTGAACAAGTATGAATCTTTGAAAGAGAAATTTTCTTCAATAAAGGGAGAGATACTGTCTACGATGGAGGAGATTGATGGGTGTTTAGACATTTTGCATTCAAAACAGGAACTCGAGTCAGATGATATCTTAGACGATGAAGAGCTTGAGGACTTTCGCTCTTTGGAGCTGCAGCAGCTTCGTCGTGAAGCATTGAATGAAGGGGAGAAAGTTTATGAAAGCAGTGATAACAAGGTAGTTTTTGATGCATTGCGGGAGCTATACAAACTTCTGGTGACAAAGCACTTGGTTTCCATTCAAGAATGGGTTTCTGTTCTGGTAAGAGTTGAAGTAGCTGACAATAGATTCAGAGATTCTACTTTGAAGGAGTTCATTGATATCCAAAACCGTGTTAAATCAGTTAAAAAAAGATGTGAGGAGGCAGGTTGTTCTTTTCTAAACTCATCAAAACTTGACGGGGAAGAAGATTTTTGGGAGGAGGGGAATGTTGTATCCATTGAAACCCCATCTGGTGTGCCTGATAATAAAAACAAACATCCTGACGTGGCATCAACTTCCCAAAATATGAGTAGTGATAAACTTGGTTCATGTGCTAAAGAGTCTAAAAGCTCTAACACTGACAGCCTACTTCATGGGGGAAATCAATCAGAGTCAAACCCTCTGAGGAGTAAACTTTTGACCAAAGCTCCTGTGGTAAGATGGGGTTCTCACTTGGATACTTGGGGTTCAAACAAGGTTTTTATGGCCAACCAGCGGGGATTGGATCTTGAAAGTCATTGGGGTAGGGTAGATGATGATGCAGTTATTCCATCAGATATAATTTCTGAATTGAGTGTTCCGGCAATGCCTTATGAAGAAAAGCAAATTGAGATCCAACCATGCCGTGCTCCTTTGAGAAAAGGGGGACTCTGTCGGAGAAGAGATATGAAAATTTGTCCATTTCATGGACCTATTATTCCTCGAGATGATGAAGGGAAGCTGCTTAGTGCAAGTCCTTCAGAAGACATGAATGTTAACATAACAAAGACTGATTTAGCTGAGAAGTTAGCAAAACAAGCAGTAAAGAATGTTCGTGAAACAGACAAGAAGGTGGCCAAGAAAAGAGAAATTGATAAACAGGAATTGAAACGTGCAAAACTTGCTAAAATTCGGGAACACAATGATGCAGTTTTACGGGATGCTGCATTGGCTTCAACTTCAAGATCAGCCGCTTTTGGAGAAGATGATGAGGTAACTAACAGAGACAAGAAAGCAAGTCTCGCGTCCATGCTGAAAAAGAAAGTAACGTCAAAAGATAGAATAGCTCAGAAGCTTTTGAGTTCACGGGCAAAGTAG

Protein sequence

>Msa1341490

MEEGEREEGNGKGAKVRFLIEKATNSTAPDVDHRLLKAIKTVVRYSDLELRLASQTLMDLMKRDHSQVRYLALQIIDELFMRSKLFRTLIVESLEQLMSLSVGFRRNLPLPAPPSVASLLRTKAIEFLEKWNVSFGVHYRQLRLGYDYLKNTLKLKFPNIQANVERIRQERREREMRSKEILLNKYESLKEKFSSIKGEILSTMEEIDGCLDILHSKQELESDDILDDEELEDFRSLELQQLRREALNEGEKVYESSDNKVVFDALRELYKLLVTKHLVSIQEWVSVLVRVEVADNRFRDSTLKEFIDIQNRVKSVKKRCEEAGCSFLNSSKLDGEEDFWEEGNVVSIETPSGVPDNKNKHPDVASTSQNMSSDKLGSCAKESKSSNTDSLLHGGNQSESNPLRSKLLTKAPVVRWGSHLDTWGSNKVFMANQRGLDLESHWGRVDDDAVIPSDIISELSVPAMPYEEKQIEIQPCRAPLRKGGLCRRRDMKICPFHGPIIPRDDEGKLLSASPSEDMNVNITKTDLAEKLAKQAVKNVRETDKKVAKKREIDKQELKRAKLAKIREHNDAVLRDAALASTSRSAAFGEDDEVTNRDKKASLASMLKKKVTSKDRIAQKLLSSRAK*