AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1371640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371640 MtrunA17_Chr1g0212611 91.304 506 27 5 1 505 1 490 0.0 794
Msa1371640 MtrunA17_Chr4g0058151 28.161 174 113 6 225 390 123 292 1.63e-14 74.3
Msa1371640 MtrunA17_Chr4g0038111 25.500 200 129 6 209 392 325 520 3.05e-13 72.4
Msa1371640 MtrunA17_Chr3g0116631 29.213 178 109 6 225 390 110 282 1.88e-12 68.2
Msa1371640 MtrunA17_Chr7g0267571 25.137 183 124 5 221 390 106 288 8.15e-12 66.2
Msa1371640 MtrunA17_Chr1g0177101 26.630 184 121 7 225 397 109 289 2.81e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371640 AT3G55340.1 42.808 292 128 6 213 495 150 411 3.15e-69 233
Msa1371640 AT3G18610.2 26.178 191 128 5 213 394 314 500 5.01e-14 75.1
Msa1371640 AT3G18610.3 26.178 191 128 5 213 394 344 530 5.03e-14 75.1
Msa1371640 AT3G18610.1 26.178 191 128 5 213 394 374 560 5.24e-14 75.1
Msa1371640 AT1G60000.1 29.651 172 117 4 222 390 83 253 4.44e-13 69.7
Msa1371640 AT4G24770.1 28.655 171 116 5 225 390 151 320 6.30e-13 70.5
Msa1371640 AT4G24770.2 28.655 171 116 5 225 390 151 320 6.30e-13 70.5
Msa1371640 AT5G50250.1 28.070 171 117 5 225 390 114 283 1.88e-12 68.6
Msa1371640 AT1G01080.3 27.647 170 110 4 225 381 109 278 1.31e-11 65.9
Msa1371640 AT2G16940.1 26.064 188 125 5 226 400 184 370 3.44e-11 66.2
Msa1371640 AT1G01080.1 27.326 172 112 4 225 383 109 280 3.54e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATCCCTCCTTCATTTC+TGG 0.108973 tig0019249:+8041 None:intergenic
ATCATTCTCCTCTGCAATTT+TGG 0.128702 tig0019249:+10052 None:intergenic
CCTCACCTTAAAACTAATTA+TGG 0.226944 tig0019249:+8525 None:intergenic
ATTCAGCGTTAATCTGGTTT+AGG 0.239346 tig0019249:+10564 None:intergenic
GAAGCAGCTATTTGTGGGTT+TGG 0.284241 tig0019249:+7483 None:intergenic
TTCCTGACACTGGCAAGTTT+AGG 0.286520 tig0019249:-8555 Msa1371640:CDS
TCCTGACACTGGCAAGTTTA+GGG 0.287968 tig0019249:-8554 Msa1371640:CDS
AAGAAGAAGAAGAATGAAAA+TGG 0.309818 tig0019249:-10272 Msa1371640:CDS
TTCAGCGTTAATCTGGTTTA+GGG 0.321694 tig0019249:+10565 None:intergenic
AAGCAGCTATTTGTGGGTTT+GGG 0.330204 tig0019249:+7484 None:intergenic
CCTTCATTTCTGGAGTAAAT+CGG 0.343732 tig0019249:+8051 None:intergenic
TTTGGTTCCATCATCTTCAT+TGG 0.353266 tig0019249:+10415 None:intergenic
GATTAGATTCAGCGTTAATC+TGG 0.363787 tig0019249:+10558 None:intergenic
ATGAAAATGGTGTGGCTAAT+GGG 0.368284 tig0019249:-10259 Msa1371640:CDS
TGCTACGGGTGTCGTCAAAA+AGG 0.378482 tig0019249:-7525 Msa1371640:CDS
GCAGGTTCCAAACCAGTTGC+AGG 0.382349 tig0019249:-7771 Msa1371640:CDS
CTTTATATCAAAGACTGAAA+AGG 0.385355 tig0019249:+7307 None:intergenic
TGTTCATGCAGTCAAGAAAA+TGG 0.388079 tig0019249:-8691 Msa1371640:intron
TTTAGAACCTGCAACTGGTT+TGG 0.388692 tig0019249:+7764 None:intergenic
GTTGCAAAGGTCGAAGCTTT+CGG 0.389760 tig0019249:+10447 None:intergenic
TTTCCACTTGCAACAGAACT+TGG 0.391674 tig0019249:+7564 None:intergenic
AACAAAACTGCAGAGGAAAA+TGG 0.393203 tig0019249:-10080 Msa1371640:CDS
TAATGGGGTTGTTGTTGTTA+AGG 0.395655 tig0019249:-10171 Msa1371640:CDS
GTCATCCTCACTTGAATAGT+AGG 0.395730 tig0019249:+8633 None:intergenic
ACACAATCAAGCCGTCTTCA+TGG 0.402597 tig0019249:+7401 None:intergenic
AATGAAAATGGTGTGGCTAA+TGG 0.404188 tig0019249:-10260 Msa1371640:CDS
ATCAAGAGCCAATGCTCGTT+TGG 0.407420 tig0019249:+8216 None:intergenic
CCCCTAAACTTGCCAGTGTC+AGG 0.419850 tig0019249:+8553 None:intergenic
AGTGATGATGATGTGGCTAA+TGG 0.422711 tig0019249:-10224 Msa1371640:CDS
CTTAGACAAAATGGGTTTGT+TGG 0.429669 tig0019249:+10481 None:intergenic
AAACGAGCATTGGCTCTTGA+TGG 0.432294 tig0019249:-8214 Msa1371640:CDS
GAAATTGGAAATGAGGGTTT+CGG 0.434366 tig0019249:-10386 Msa1371640:CDS
TCTTGTTTGGAAGGCCTGTC+AGG 0.436677 tig0019249:-7830 Msa1371640:CDS
ACTGGTTTGGAACCTGCAAC+GGG 0.437323 tig0019249:+7777 None:intergenic
TTTATATCAAAGACTGAAAA+GGG 0.437811 tig0019249:+7308 None:intergenic
TTTATTGATTTATTCACAAA+TGG 0.438080 tig0019249:-7241 Msa1371640:three_prime_UTR
AACTGGTTTGGAACCTGCAA+CGG 0.439408 tig0019249:+7776 None:intergenic
CTTCATTTCTGGAGTAAATC+GGG 0.442986 tig0019249:+8052 None:intergenic
TTGGACCAAAGTGTCTTGTT+TGG 0.444576 tig0019249:-7843 Msa1371640:CDS
AGATGAATCAATTGAAAAGA+AGG 0.446995 tig0019249:-10318 Msa1371640:CDS
GTACAACAAAATCAAAGCTT+TGG 0.454292 tig0019249:+7183 None:intergenic
AATGATGATAGTGTTGCTAA+TGG 0.456928 tig0019249:-10188 Msa1371640:CDS
ATGATGATAGTGTTGCTAAT+GGG 0.460576 tig0019249:-10187 Msa1371640:CDS
CTTCTCAAATTGCAATGTAA+AGG 0.461827 tig0019249:-7961 Msa1371640:CDS
GTTGCTTGAGTTGCTTTACA+TGG 0.466789 tig0019249:+8074 None:intergenic
GTGATGATGATGTGGCTAAT+GGG 0.468531 tig0019249:-10223 Msa1371640:CDS
CCTGGTTTAGAACCTGCAAC+TGG 0.468577 tig0019249:+7759 None:intergenic
AATGCCACAATCTACGGTAT+TGG 0.479144 tig0019249:-10012 Msa1371640:CDS
CAGTAGAAGCAGCTATTTGT+GGG 0.480573 tig0019249:+7478 None:intergenic
CTTGGTATGGACAAGGAAAC+GGG 0.485470 tig0019249:-7930 Msa1371640:CDS
GCAGTTGAGCAACCAGGTGC+AGG 0.486239 tig0019249:-7609 Msa1371640:CDS
ACTTGGTATGGACAAGGAAA+CGG 0.498089 tig0019249:-7931 Msa1371640:CDS
ACCAAAGTGTCTTGTTTGGA+AGG 0.502106 tig0019249:-7839 Msa1371640:CDS
AGCAGCGGCCAAACGAGCAT+TGG 0.504558 tig0019249:-8224 Msa1371640:CDS
GCTACGAAAGTTTATGTTGG+AGG 0.506031 tig0019249:-8661 Msa1371640:CDS
AACGAGGAAATTGGAAATGA+GGG 0.508780 tig0019249:-10392 Msa1371640:CDS
ACTCAATCCAATGAAGATGA+TGG 0.516122 tig0019249:-10422 Msa1371640:CDS
CCGATTTACTCCAGAAATGA+AGG 0.517469 tig0019249:-8051 Msa1371640:CDS
AAACGAGGAAATTGGAAATG+AGG 0.518572 tig0019249:-10393 Msa1371640:CDS
TACTGCACTTTGAAGCATGC+AGG 0.519924 tig0019249:-7460 Msa1371640:exon
AGAGGAAATGCCACAATCTA+CGG 0.521392 tig0019249:-10018 Msa1371640:CDS
GCCTTCCAAACAAGACACTT+TGG 0.522248 tig0019249:+7838 None:intergenic
ATATCGTTCCGCCATGAAGA+CGG 0.522923 tig0019249:-7412 Msa1371640:three_prime_UTR
TTGGATTGAGTTTGTTGCAA+AGG 0.528061 tig0019249:+10434 None:intergenic
CTTGTCCATACCAAGTCGTA+TGG 0.528600 tig0019249:+7938 None:intergenic
AAAGGCCATACGACTTGGTA+TGG 0.529863 tig0019249:-7943 Msa1371640:CDS
GCAGTAGAAGCAGCTATTTG+TGG 0.531101 tig0019249:+7477 None:intergenic
CATGCAATTAATTTCAGTGA+TGG 0.534530 tig0019249:+8582 None:intergenic
GGATATAATAGAATATATGT+TGG 0.535480 tig0019249:-8026 Msa1371640:CDS
CCTGACACTGGCAAGTTTAG+GGG 0.542201 tig0019249:-8553 Msa1371640:CDS
GTTGCTACGAAAGTTTATGT+TGG 0.543964 tig0019249:-8664 Msa1371640:CDS
AACAAAATCAAAGCTTTGGT+AGG 0.544766 tig0019249:+7187 None:intergenic
GAACTTGGTTGCTCAACAGT+TGG 0.545048 tig0019249:+7579 None:intergenic
ACTGAAGACAGCACTTGCAT+TGG 0.546883 tig0019249:-7862 Msa1371640:CDS
AGACAAAATGGGTTTGTTGG+TGG 0.554333 tig0019249:+10484 None:intergenic
GCAGGTTCTAAACCAGGTGC+AGG 0.555413 tig0019249:-7753 Msa1371640:CDS
CAACCAAGTTCTGTTGCAAG+TGG 0.556840 tig0019249:-7567 Msa1371640:CDS
ACCGCACAACTTATCCTGAC+AGG 0.558651 tig0019249:+7816 None:intergenic
AACTGCAGAGGAAAATGGTA+AGG 0.561255 tig0019249:-10075 Msa1371640:CDS
TCATCCTCACTTGAATAGTA+GGG 0.561329 tig0019249:+8634 None:intergenic
TCATTTGCAGTTGAGCAACC+AGG 0.564422 tig0019249:-7615 Msa1371640:CDS
AATGTAAAGGCCATACGACT+TGG 0.565382 tig0019249:-7948 Msa1371640:CDS
CTGACACTGGCAAGTTTAGG+GGG 0.568128 tig0019249:-8552 Msa1371640:CDS
TATATGTTGGAAGTCTGTCA+TGG 0.574488 tig0019249:-8013 Msa1371640:CDS
AAATAACAGAGGAAGAACTA+AGG 0.575629 tig0019249:-7989 Msa1371640:CDS
AAGGAAACGGGAGAATTTCG+AGG 0.577973 tig0019249:-7918 Msa1371640:CDS
CCAGTTGCAGGTTCTAAACC+AGG 0.578088 tig0019249:-7759 Msa1371640:CDS
AGGAAGAATAGAATGTGCTA+CGG 0.579726 tig0019249:-7540 Msa1371640:CDS
TGAAAATGGTGTGGCTAATG+GGG 0.585256 tig0019249:-10258 Msa1371640:CDS
TGATGATGATGTGGCTAATG+GGG 0.585907 tig0019249:-10222 Msa1371640:CDS
GTTCTGTTGCAAGTGGAAAG+AGG 0.588009 tig0019249:-7560 Msa1371640:CDS
AAAGAAGAACAAAACTGCAG+AGG 0.588575 tig0019249:-10087 Msa1371640:CDS
CTAACACTACTACCACTACA+AGG 0.592037 tig0019249:-9989 Msa1371640:intron
TGATGATAGTGTTGCTAATG+GGG 0.592050 tig0019249:-10186 Msa1371640:CDS
ATATGTTGGAAGTCTGTCAT+GGG 0.601270 tig0019249:-8012 Msa1371640:CDS
GGAAGAATAGAATGTGCTAC+GGG 0.605374 tig0019249:-7539 Msa1371640:CDS
GAAGAAGAATGAAAATGGTG+TGG 0.615435 tig0019249:-10267 Msa1371640:CDS
AAATAGGACAGTATCTGTAG+TGG 0.615605 tig0019249:-7360 Msa1371640:three_prime_UTR
GTTGAGCAACCAGGTGCAGG+AGG 0.622181 tig0019249:-7606 Msa1371640:CDS
ATAGATAAATCACCTTGTAG+TGG 0.629770 tig0019249:+9977 None:intergenic
GAATGATTCTAATCATCAAG+AGG 0.630329 tig0019249:-10036 Msa1371640:CDS
TTAGCCAATACCGTAGATTG+TGG 0.631628 tig0019249:+10008 None:intergenic
CATACGACTTGGTATGGACA+AGG 0.655913 tig0019249:-7937 Msa1371640:CDS
TTTACTCCAGAAATGAAGGA+GGG 0.658643 tig0019249:-8047 Msa1371640:CDS
GCCTGTCAGGATAAGTTGTG+CGG 0.659328 tig0019249:-7817 Msa1371640:CDS
ATTTACTCCAGAAATGAAGG+AGG 0.660456 tig0019249:-8048 Msa1371640:CDS
GAAGAAGAGTGATGATGATG+TGG 0.667326 tig0019249:-10231 Msa1371640:CDS
TGGTAAGGCCAAAATTGCAG+AGG 0.668394 tig0019249:-10060 Msa1371640:CDS
AGGAAACGGGAGAATTTCGA+GGG 0.671275 tig0019249:-7917 Msa1371640:CDS
AATTCCCTACTATTCAAGTG+AGG 0.689712 tig0019249:-8638 Msa1371640:CDS
TCTGTCATGGGAAATAACAG+AGG 0.691463 tig0019249:-8000 Msa1371640:CDS
CTTCCTGCAGACTGAAGCAG+CGG 0.704303 tig0019249:-8239 Msa1371640:intron
CAATCAAGCCGTCTTCATGG+CGG 0.743839 tig0019249:+7404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTGAAAAAAACAAAAT+AGG - tig0019249:10427-10446 Msa1371640:CDS 10.0%
!!! ATTTTTATTTAATGTGTGTT+TGG - tig0019249:7940-7959 Msa1371640:CDS 15.0%
!!! ATTGATTTTGAATGAATTTA+TGG - tig0019249:7979-7998 Msa1371640:CDS 15.0%
!! ATCAATATTAAGTATATGTT+TGG + tig0019249:8141-8160 None:intergenic 15.0%
!! AGATAATCAATTAAAAAACT+GGG + tig0019249:9083-9102 None:intergenic 15.0%
!! TAAAACATTTAATGTTAACA+GGG - tig0019249:9683-9702 Msa1371640:intron 15.0%
!!! TTTATTGATTTATTCACAAA+TGG - tig0019249:10562-10581 Msa1371640:CDS 15.0%
!! CTATTAATTCACATAAAAAT+TGG + tig0019249:10590-10609 None:intergenic 15.0%
!! TGCAAAAAAATCAATGAAAA+AGG - tig0019249:7656-7675 Msa1371640:CDS 20.0%
!!! TTTTTTTTCCTTACTTATGA+AGG - tig0019249:7857-7876 Msa1371640:CDS 20.0%
!! TAAATTAACCTTCATAAGTA+AGG + tig0019249:7868-7887 None:intergenic 20.0%
!!! AATCAATGATACTTTAAAAG+TGG - tig0019249:8113-8132 Msa1371640:intron 20.0%
!!! TTAATATTGATTTTGTGTGA+AGG - tig0019249:8150-8169 Msa1371640:intron 20.0%
!! CAATAATAGAATGATAAATG+AGG - tig0019249:8240-8259 Msa1371640:intron 20.0%
!! AATTACTCTTTCAAAAAATG+TGG - tig0019249:8756-8775 Msa1371640:intron 20.0%
!!! GTTTCAATTAAAGTTTTTCT+AGG + tig0019249:8914-8933 None:intergenic 20.0%
!! TGATATATGATAGAACATTA+TGG - tig0019249:8979-8998 Msa1371640:intron 20.0%
!! ACAATAATAACAACAATCAA+GGG + tig0019249:9028-9047 None:intergenic 20.0%
!! AACAATAATAACAACAATCA+AGG + tig0019249:9029-9048 None:intergenic 20.0%
!! CAGATAATCAATTAAAAAAC+TGG + tig0019249:9084-9103 None:intergenic 20.0%
!!! CATTTTTAGCTTTATTTTGT+TGG - tig0019249:9312-9331 Msa1371640:intron 20.0%
!! GTAAAACATTTAATGTTAAC+AGG - tig0019249:9682-9701 Msa1371640:intron 20.0%
!! AAAACATTTAATGTTAACAG+GGG - tig0019249:9684-9703 Msa1371640:intron 20.0%
!! GGATATAATAGAATATATGT+TGG - tig0019249:9777-9796 Msa1371640:intron 20.0%
!! GAAAAAAAATGACAACAATA+TGG + tig0019249:10476-10495 None:intergenic 20.0%
!! TTTATATCAAAGACTGAAAA+GGG + tig0019249:10498-10517 None:intergenic 20.0%
!! TATAAAGCAAGAAAAAATGT+AGG - tig0019249:10512-10531 Msa1371640:CDS 20.0%
!! ATAAAGCAAGAAAAAATGTA+GGG - tig0019249:10513-10532 Msa1371640:CDS 20.0%
! AGATGAATCAATTGAAAAGA+AGG - tig0019249:7485-7504 Msa1371640:CDS 25.0%
! AAGAAGAAGAAGAATGAAAA+TGG - tig0019249:7531-7550 Msa1371640:CDS 25.0%
! AAATGTCTCAAACAATGTAA+TGG - tig0019249:7913-7932 Msa1371640:CDS 25.0%
! TGACTAAAATTCAATTGTAG+AGG - tig0019249:8043-8062 Msa1371640:CDS 25.0%
! ATGAAAATATTGTAGAGAGT+TGG - tig0019249:8314-8333 Msa1371640:intron 25.0%
! TGAAAATATTGTAGAGAGTT+GGG - tig0019249:8315-8334 Msa1371640:intron 25.0%
! CATGTAGATTCTATATAGTA+AGG - tig0019249:8405-8424 Msa1371640:intron 25.0%
! TATATGATAGAACATTATGG+CGG - tig0019249:8982-9001 Msa1371640:intron 25.0%
!!! GATTGCCATAATTAGTTTTA+AGG - tig0019249:9273-9292 Msa1371640:intron 25.0%
!!! CATAATTAGTTTTAAGGTGA+GGG - tig0019249:9279-9298 Msa1371640:intron 25.0%
! CTATACTAGCAATACATTAT+AGG - tig0019249:9416-9435 Msa1371640:intron 25.0%
! GAAAATAATATATGAACCGA+TGG + tig0019249:9449-9468 None:intergenic 25.0%
!!! AATCGATTTTTGGAATTGTA+AGG + tig0019249:9498-9517 None:intergenic 25.0%
!!! CCATAATAAGAATCGATTTT+TGG + tig0019249:9508-9527 None:intergenic 25.0%
!! CCAAAAATCGATTCTTATTA+TGG - tig0019249:9505-9524 Msa1371640:intron 25.0%
! CTTTATATCAAAGACTGAAA+AGG + tig0019249:10499-10518 None:intergenic 25.0%
! TAAAGCAAGAAAAAATGTAG+GGG - tig0019249:10514-10533 Msa1371640:CDS 25.0%
TTTGAAGAAGAAGAAGAAGA+AGG + tig0019249:7273-7292 None:intergenic 30.0%
! ATTTCCAATTTCCTCGTTTT+TGG + tig0019249:7409-7428 None:intergenic 30.0%
GAAAGAAGAAGAACAAAAAG+AGG - tig0019249:7439-7458 Msa1371640:three_prime_UTR 30.0%
GAACAAAAAGAGGAAAATGA+AGG - tig0019249:7449-7468 Msa1371640:three_prime_UTR 30.0%
! AATGATGATAGTGTTGCTAA+TGG - tig0019249:7615-7634 Msa1371640:CDS 30.0%
! ATGATGATAGTGTTGCTAAT+GGG - tig0019249:7616-7635 Msa1371640:CDS 30.0%
GAATGATTCTAATCATCAAG+AGG - tig0019249:7767-7786 Msa1371640:CDS 30.0%
ATAGATAAATCACCTTGTAG+TGG + tig0019249:7829-7848 None:intergenic 30.0%
GAAAATATTGTAGAGAGTTG+GGG - tig0019249:8316-8335 Msa1371640:intron 30.0%
! CTTACCATCTTTTCTACAAT+AGG + tig0019249:8347-8366 None:intergenic 30.0%
AGAAAAGATGGTAAGAAACT+CGG - tig0019249:8352-8371 Msa1371640:intron 30.0%
AAGAAATAGATGACATTGAG+AGG - tig0019249:8493-8512 Msa1371640:intron 30.0%
AGAAATAGATGACATTGAGA+GGG - tig0019249:8494-8513 Msa1371640:intron 30.0%
! AATTTAAAACCCTCCTCATT+TGG - tig0019249:8599-8618 Msa1371640:CDS 30.0%
! ATTTAAAACCCTCCTCATTT+GGG - tig0019249:8600-8619 Msa1371640:CDS 30.0%
GAACTCAAAAATTGTATTGG+AGG - tig0019249:8624-8643 Msa1371640:CDS 30.0%
TCAAAAATTGTATTGGAGGA+GGG - tig0019249:8628-8647 Msa1371640:CDS 30.0%
TAATAACAACAATCAAGGGT+CGG + tig0019249:9024-9043 None:intergenic 30.0%
!!! GACATTCACAGTTATTTTGA+AGG - tig0019249:9190-9209 Msa1371640:intron 30.0%
CATGCAATTAATTTCAGTGA+TGG + tig0019249:9224-9243 None:intergenic 30.0%
CCTCACCTTAAAACTAATTA+TGG + tig0019249:9281-9300 None:intergenic 30.0%
!!! CCATAATTAGTTTTAAGGTG+AGG - tig0019249:9278-9297 Msa1371640:intron 30.0%
! TCTTTTTGTGCTTCCTTATA+TGG - tig0019249:9366-9385 Msa1371640:intron 30.0%
CATTATAGGTCTATTTCCAT+CGG - tig0019249:9430-9449 Msa1371640:intron 30.0%
AAATAACAGAGGAAGAACTA+AGG - tig0019249:9814-9833 Msa1371640:intron 30.0%
CTTCTCAAATTGCAATGTAA+AGG - tig0019249:9842-9861 Msa1371640:intron 30.0%
! AACTGCAAATGATTTTTCAC+CGG + tig0019249:10180-10199 None:intergenic 30.0%
AAAGCAAGAAAAAATGTAGG+GGG - tig0019249:10515-10534 Msa1371640:CDS 30.0%
! TTCAGCGTTAATCTGGTTTA+GGG + tig0019249:7241-7260 None:intergenic 35.0%
! ATTCAGCGTTAATCTGGTTT+AGG + tig0019249:7242-7261 None:intergenic 35.0%
GATTAGATTCAGCGTTAATC+TGG + tig0019249:7248-7267 None:intergenic 35.0%
! CTTAGACAAAATGGGTTTGT+TGG + tig0019249:7325-7344 None:intergenic 35.0%
! TTTTCGCGCTTAGACAAAAT+GGG + tig0019249:7333-7352 None:intergenic 35.0%
! TTTTTCGCGCTTAGACAAAA+TGG + tig0019249:7334-7353 None:intergenic 35.0%
!! TTGGATTGAGTTTGTTGCAA+AGG + tig0019249:7372-7391 None:intergenic 35.0%
ACTCAATCCAATGAAGATGA+TGG - tig0019249:7381-7400 Msa1371640:three_prime_UTR 35.0%
! TTTGGTTCCATCATCTTCAT+TGG + tig0019249:7391-7410 None:intergenic 35.0%
AAACGAGGAAATTGGAAATG+AGG - tig0019249:7410-7429 Msa1371640:three_prime_UTR 35.0%
AACGAGGAAATTGGAAATGA+GGG - tig0019249:7411-7430 Msa1371640:three_prime_UTR 35.0%
GAAATTGGAAATGAGGGTTT+CGG - tig0019249:7417-7436 Msa1371640:three_prime_UTR 35.0%
GAAGAAGAATGAAAATGGTG+TGG - tig0019249:7536-7555 Msa1371640:CDS 35.0%
AATGAAAATGGTGTGGCTAA+TGG - tig0019249:7543-7562 Msa1371640:CDS 35.0%
ATGAAAATGGTGTGGCTAAT+GGG - tig0019249:7544-7563 Msa1371640:CDS 35.0%
! TGATGATAGTGTTGCTAATG+GGG - tig0019249:7617-7636 Msa1371640:CDS 35.0%
! TAATGGGGTTGTTGTTGTTA+AGG - tig0019249:7632-7651 Msa1371640:CDS 35.0%
AAAGAAGAACAAAACTGCAG+AGG - tig0019249:7716-7735 Msa1371640:CDS 35.0%
AACAAAACTGCAGAGGAAAA+TGG - tig0019249:7723-7742 Msa1371640:CDS 35.0%
! ATCATTCTCCTCTGCAATTT+TGG + tig0019249:7754-7773 None:intergenic 35.0%
GTCTCAAACAATGTAATGGT+TGG - tig0019249:7917-7936 Msa1371640:CDS 35.0%
!! TTAATGTGTGTTTGGTGCTA+TGG - tig0019249:7948-7967 Msa1371640:CDS 35.0%
CAAGTTTGAATCAATTCTGG+AGG - tig0019249:8087-8106 Msa1371640:CDS 35.0%
AGCACCTATTGTAGAAAAGA+TGG - tig0019249:8340-8359 Msa1371640:intron 35.0%
AGGGGTTTGTAAAAAAAGGA+AGG - tig0019249:8461-8480 Msa1371640:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - tig0019249:8495-8514 Msa1371640:intron 35.0%
AATTCAAAACCCTCCTCATT+TGG - tig0019249:8546-8565 Msa1371640:CDS 35.0%
ATTCAAAACCCTCCTCATTT+GGG - tig0019249:8547-8566 Msa1371640:CDS 35.0%
! TTTAAAACCCTCCTCATTTG+GGG - tig0019249:8601-8620 Msa1371640:CDS 35.0%
GGGGAACTCAAAAATTGTAT+TGG - tig0019249:8621-8640 Msa1371640:CDS 35.0%
CTCAAAAATTGTATTGGAGG+AGG - tig0019249:8627-8646 Msa1371640:CDS 35.0%
TCATCTGATTTACTTCCCTT+AGG + tig0019249:8860-8879 None:intergenic 35.0%
TAGAGATTAATGAGCTGGAT+AGG - tig0019249:8952-8971 Msa1371640:intron 35.0%
AGAGATTAATGAGCTGGATA+GGG - tig0019249:8953-8972 Msa1371640:intron 35.0%
TGTTCATGCAGTCAAGAAAA+TGG - tig0019249:9112-9131 Msa1371640:intron 35.0%
GTTGCTACGAAAGTTTATGT+TGG - tig0019249:9139-9158 Msa1371640:intron 35.0%
AATTCCCTACTATTCAAGTG+AGG - tig0019249:9165-9184 Msa1371640:intron 35.0%
TCATCCTCACTTGAATAGTA+GGG + tig0019249:9172-9191 None:intergenic 35.0%
TTTGTGCTTCCTTATATGGT+AGG - tig0019249:9370-9389 Msa1371640:intron 35.0%
GCAATCAATCCTACCATATA+AGG + tig0019249:9382-9401 None:intergenic 35.0%
ATTGATTGCAATGTTTCAGC+AGG - tig0019249:9393-9412 Msa1371640:intron 35.0%
ACATTTAATGTTAACAGGGG+AGG - tig0019249:9687-9706 Msa1371640:intron 35.0%
!! CTTCATTTCTGGAGTAAATC+GGG + tig0019249:9754-9773 None:intergenic 35.0%
!! CCTTCATTTCTGGAGTAAAT+CGG + tig0019249:9755-9774 None:intergenic 35.0%
ATTTACTCCAGAAATGAAGG+AGG - tig0019249:9755-9774 Msa1371640:intron 35.0%
TTTACTCCAGAAATGAAGGA+GGG - tig0019249:9756-9775 Msa1371640:intron 35.0%
TTATATCCCTCCTTCATTTC+TGG + tig0019249:9765-9784 None:intergenic 35.0%
TATATGTTGGAAGTCTGTCA+TGG - tig0019249:9790-9809 Msa1371640:intron 35.0%
ATATGTTGGAAGTCTGTCAT+GGG - tig0019249:9791-9810 Msa1371640:intron 35.0%
AGGAAGAATAGAATGTGCTA+CGG - tig0019249:10263-10282 Msa1371640:CDS 35.0%
AAATAGGACAGTATCTGTAG+TGG - tig0019249:10443-10462 Msa1371640:CDS 35.0%
GAAGAAGAAGAAGAAGAAGG+TGG + tig0019249:7270-7289 None:intergenic 40.0%
!! AGACAAAATGGGTTTGTTGG+TGG + tig0019249:7322-7341 None:intergenic 40.0%
!! AGATGATGGAACCAAAAACG+AGG - tig0019249:7395-7414 Msa1371640:three_prime_UTR 40.0%
GGAACCAAAAACGAGGAAAT+TGG - tig0019249:7402-7421 Msa1371640:three_prime_UTR 40.0%
TGAAAATGGTGTGGCTAATG+GGG - tig0019249:7545-7564 Msa1371640:CDS 40.0%
! GAAGAAGAGTGATGATGATG+TGG - tig0019249:7572-7591 Msa1371640:CDS 40.0%
! AGTGATGATGATGTGGCTAA+TGG - tig0019249:7579-7598 Msa1371640:CDS 40.0%
! GTGATGATGATGTGGCTAAT+GGG - tig0019249:7580-7599 Msa1371640:CDS 40.0%
! TGATGATGATGTGGCTAATG+GGG - tig0019249:7581-7600 Msa1371640:CDS 40.0%
AACTGCAGAGGAAAATGGTA+AGG - tig0019249:7728-7747 Msa1371640:CDS 40.0%
AGAGGAAATGCCACAATCTA+CGG - tig0019249:7785-7804 Msa1371640:CDS 40.0%
AATGCCACAATCTACGGTAT+TGG - tig0019249:7791-7810 Msa1371640:CDS 40.0%
TTAGCCAATACCGTAGATTG+TGG + tig0019249:7798-7817 None:intergenic 40.0%
CTAACACTACTACCACTACA+AGG - tig0019249:7814-7833 Msa1371640:CDS 40.0%
GCGCAAGTTTGAATCAATTC+TGG - tig0019249:8084-8103 Msa1371640:CDS 40.0%
TGATAAATGAGGATGTGCGT+TGG - tig0019249:8251-8270 Msa1371640:intron 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - tig0019249:8423-8442 Msa1371640:intron 40.0%
TTCAAAACCCTCCTCATTTG+GGG - tig0019249:8548-8567 Msa1371640:CDS 40.0%
TTAAAACCCTCCTCATTTGG+GGG - tig0019249:8602-8621 Msa1371640:CDS 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + tig0019249:8615-8634 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - tig0019249:8634-8653 Msa1371640:CDS 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + tig0019249:8842-8861 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTA+AGG - tig0019249:8841-8860 Msa1371640:intron 40.0%
AACTCCCAAACAAAGCCTAA+GGG - tig0019249:8842-8861 Msa1371640:intron 40.0%
!! ACTTCCCTTAGGCTTTGTTT+GGG + tig0019249:8849-8868 None:intergenic 40.0%
!! TACTTCCCTTAGGCTTTGTT+TGG + tig0019249:8850-8869 None:intergenic 40.0%
GAGACTAGAGATTAATGAGC+TGG - tig0019249:8947-8966 Msa1371640:intron 40.0%
GCTACGAAAGTTTATGTTGG+AGG - tig0019249:9142-9161 Msa1371640:intron 40.0%
GTCATCCTCACTTGAATAGT+AGG + tig0019249:9173-9192 None:intergenic 40.0%
!!! CACAGTTATTTTGAAGGCTG+TGG - tig0019249:9196-9215 Msa1371640:intron 40.0%
! GTTGCTTGAGTTGCTTTACA+TGG + tig0019249:9732-9751 None:intergenic 40.0%
CCGATTTACTCCAGAAATGA+AGG - tig0019249:9752-9771 Msa1371640:intron 40.0%
TCTGTCATGGGAAATAACAG+AGG - tig0019249:9803-9822 Msa1371640:intron 40.0%
AATGTAAAGGCCATACGACT+TGG - tig0019249:9855-9874 Msa1371640:intron 40.0%
ACTTGGTATGGACAAGGAAA+CGG - tig0019249:9872-9891 Msa1371640:intron 40.0%
! TTGGACCAAAGTGTCTTGTT+TGG - tig0019249:9960-9979 Msa1371640:intron 40.0%
!! ACCAAAGTGTCTTGTTTGGA+AGG - tig0019249:9964-9983 Msa1371640:intron 40.0%
!!! GCAACGGGTTTTTTGTTCAA+AGG + tig0019249:10014-10033 None:intergenic 40.0%
TTGAACAAAAAACCCGTTGC+AGG - tig0019249:10014-10033 Msa1371640:CDS 40.0%
! TTTAGAACCTGCAACTGGTT+TGG + tig0019249:10042-10061 None:intergenic 40.0%
TCAGTTGCAGTTGAAAAACC+AGG - tig0019249:10080-10099 Msa1371640:CDS 40.0%
!! ATTGATTTTTCACCTGCACC+TGG + tig0019249:10101-10120 None:intergenic 40.0%
TCAGTTGCTGGTGAAAAATC+AGG - tig0019249:10152-10171 Msa1371640:CDS 40.0%
TTTCCACTTGCAACAGAACT+TGG + tig0019249:10242-10261 None:intergenic 40.0%
GGAAGAATAGAATGTGCTAC+GGG - tig0019249:10264-10283 Msa1371640:CDS 40.0%
AAGCAGCTATTTGTGGGTTT+GGG + tig0019249:10322-10341 None:intergenic 40.0%
CAGTAGAAGCAGCTATTTGT+GGG + tig0019249:10328-10347 None:intergenic 40.0%
GTTGCAAAGGTCGAAGCTTT+CGG + tig0019249:7359-7378 None:intergenic 45.0%
TGGTAAGGCCAAAATTGCAG+AGG - tig0019249:7743-7762 Msa1371640:CDS 45.0%
GATGGTAAGAAACTCGGCTT+AGG - tig0019249:8358-8377 Msa1371640:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - tig0019249:8427-8446 Msa1371640:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - tig0019249:8428-8447 Msa1371640:intron 45.0%
GGGGAGGGGTTTGTAAAAAA+AGG - tig0019249:8457-8476 Msa1371640:intron 45.0%
TAGATGACATTGAGAGGGGA+AGG - tig0019249:8499-8518 Msa1371640:intron 45.0%
TCAAAACCCTCCTCATTTGG+GGG - tig0019249:8549-8568 Msa1371640:CDS 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG - tig0019249:8638-8657 Msa1371640:CDS 45.0%
TCTGGAGGGTTGGGAATATA+GGG + tig0019249:8799-8818 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + tig0019249:8837-8856 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + tig0019249:8838-8857 None:intergenic 45.0%
GAGAGTAGTCAAACCACTAG+AGG - tig0019249:8878-8897 Msa1371640:intron 45.0%
! TGCATGACTTTTCCTGACAC+TGG - tig0019249:9238-9257 Msa1371640:intron 45.0%
TTCCTGACACTGGCAAGTTT+AGG - tig0019249:9248-9267 Msa1371640:intron 45.0%
TCCTGACACTGGCAAGTTTA+GGG - tig0019249:9249-9268 Msa1371640:intron 45.0%
!! ACAACTTGCTGACGTTTCTG+TGG - tig0019249:9537-9556 Msa1371640:intron 45.0%
ATCAAGAGCCAATGCTCGTT+TGG + tig0019249:9590-9609 None:intergenic 45.0%
!! AAACGAGCATTGGCTCTTGA+TGG - tig0019249:9589-9608 Msa1371640:intron 45.0%
!! AAAGGCCATACGACTTGGTA+TGG - tig0019249:9860-9879 Msa1371640:intron 45.0%
CTTGTCCATACCAAGTCGTA+TGG + tig0019249:9868-9887 None:intergenic 45.0%
!! CATACGACTTGGTATGGACA+AGG - tig0019249:9866-9885 Msa1371640:intron 45.0%
CTTGGTATGGACAAGGAAAC+GGG - tig0019249:9873-9892 Msa1371640:intron 45.0%
AAGGAAACGGGAGAATTTCG+AGG - tig0019249:9885-9904 Msa1371640:intron 45.0%
AGGAAACGGGAGAATTTCGA+GGG - tig0019249:9886-9905 Msa1371640:intron 45.0%
ACTGAAGACAGCACTTGCAT+TGG - tig0019249:9941-9960 Msa1371640:intron 45.0%
GCCTTCCAAACAAGACACTT+TGG + tig0019249:9968-9987 None:intergenic 45.0%
!! AACTGGTTTGGAACCTGCAA+CGG + tig0019249:10030-10049 None:intergenic 45.0%
!! ACTGATTTTTCACCTGCACC+TGG + tig0019249:10065-10084 None:intergenic 45.0%
!! ACTGATTTTTCAGCTGCAGC+TGG + tig0019249:10137-10156 None:intergenic 45.0%
GCAGCTGAAAAATCAGTTGC+TGG - tig0019249:10140-10159 Msa1371640:CDS 45.0%
TCATTTGCAGTTGAGCAACC+AGG - tig0019249:10188-10207 Msa1371640:CDS 45.0%
GAACTTGGTTGCTCAACAGT+TGG + tig0019249:10227-10246 None:intergenic 45.0%
CAACCAAGTTCTGTTGCAAG+TGG - tig0019249:10236-10255 Msa1371640:CDS 45.0%
GTTCTGTTGCAAGTGGAAAG+AGG - tig0019249:10243-10262 Msa1371640:CDS 45.0%
GAAGCAGCTATTTGTGGGTT+TGG + tig0019249:10323-10342 None:intergenic 45.0%
GCAGTAGAAGCAGCTATTTG+TGG + tig0019249:10329-10348 None:intergenic 45.0%
!! TACTGCACTTTGAAGCATGC+AGG - tig0019249:10343-10362 Msa1371640:CDS 45.0%
ATATCGTTCCGCCATGAAGA+CGG - tig0019249:10391-10410 Msa1371640:CDS 45.0%
ACACAATCAAGCCGTCTTCA+TGG + tig0019249:10405-10424 None:intergenic 45.0%
GGTAAGAAACTCGGCTTAGG+TGG - tig0019249:8361-8380 Msa1371640:intron 50.0%
GAAACTCGGCTTAGGTGGTT+TGG - tig0019249:8366-8385 Msa1371640:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - tig0019249:8426-8445 Msa1371640:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - tig0019249:8433-8452 Msa1371640:intron 50.0%
ACATTGAGAGGGGAAGGCTT+TGG - tig0019249:8505-8524 Msa1371640:intron 50.0%
CATTGAGAGGGGAAGGCTTT+GGG - tig0019249:8506-8525 Msa1371640:intron 50.0%
ATTGAGAGGGGAAGGCTTTG+GGG - tig0019249:8507-8526 Msa1371640:intron 50.0%
CAAAACCCTCCTCATTTGGG+GGG - tig0019249:8550-8569 Msa1371640:CDS 50.0%
AAAACCCTCCTCATTTGGGG+GGG - tig0019249:8551-8570 Msa1371640:CDS 50.0%
TGAGTTCCCCCAAATGAGGA+GGG + tig0019249:8611-8630 None:intergenic 50.0%
TTGAGTTCCCCCAAATGAGG+AGG + tig0019249:8612-8631 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - tig0019249:8637-8656 Msa1371640:CDS 50.0%
CTGGAGGGTTGGGAATATAG+GGG + tig0019249:8798-8817 None:intergenic 50.0%
! CTCTGGAGGGTTGGGAATAT+AGG + tig0019249:8800-8819 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + tig0019249:8839-8858 None:intergenic 50.0%
AGTCAAACCACTAGAGGCAG+AGG - tig0019249:8884-8903 Msa1371640:intron 50.0%
ACAATCAAGGGTCGGCTACA+TGG + tig0019249:9016-9035 None:intergenic 50.0%
CCTGACACTGGCAAGTTTAG+GGG - tig0019249:9250-9269 Msa1371640:intron 50.0%
CTGACACTGGCAAGTTTAGG+GGG - tig0019249:9251-9270 Msa1371640:intron 50.0%
! TCTTGTTTGGAAGGCCTGTC+AGG - tig0019249:9973-9992 Msa1371640:intron 50.0%
GCCTGTCAGGATAAGTTGTG+CGG - tig0019249:9986-10005 Msa1371640:intron 50.0%
ACCGCACAACTTATCCTGAC+AGG + tig0019249:9990-10009 None:intergenic 50.0%
!! ACTGGTTTGGAACCTGCAAC+GGG + tig0019249:10029-10048 None:intergenic 50.0%
! CCTGGTTTAGAACCTGCAAC+TGG + tig0019249:10047-10066 None:intergenic 50.0%
!! CCAGTTGCAGGTTCTAAACC+AGG - tig0019249:10044-10063 Msa1371640:CDS 50.0%
GCAGTTGAAAAACCAGGTGC+AGG - tig0019249:10086-10105 Msa1371640:CDS 50.0%
GCTGGTGAAAAATCAGGTGC+CGG - tig0019249:10158-10177 Msa1371640:CDS 50.0%
! TGCTACGGGTGTCGTCAAAA+AGG - tig0019249:10278-10297 Msa1371640:CDS 50.0%
CAATCAAGCCGTCTTCATGG+CGG + tig0019249:10402-10421 None:intergenic 50.0%
GAGGATGTGCGTTGGATGTG+TGG - tig0019249:8259-8278 Msa1371640:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - tig0019249:8432-8451 Msa1371640:intron 55.0%
AAACCCTCCTCATTTGGGGG+GGG - tig0019249:8552-8571 Msa1371640:CDS 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + tig0019249:8832-8851 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + tig0019249:8833-8852 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + tig0019249:8834-8853 None:intergenic 55.0%
AGGTCTTCCTCTGCCTCTAG+TGG + tig0019249:8894-8913 None:intergenic 55.0%
CCCCTAAACTTGCCAGTGTC+AGG + tig0019249:9253-9272 None:intergenic 55.0%
CTTCCTGCAGACTGAAGCAG+CGG - tig0019249:9564-9583 Msa1371640:intron 55.0%
GCAGGTTCCAAACCAGTTGC+AGG - tig0019249:10032-10051 Msa1371640:CDS 55.0%
!! GCAGGTTCTAAACCAGGTGC+AGG - tig0019249:10050-10069 Msa1371640:CDS 55.0%
!!! GTTGGTTTTCCTCCTGCACC+TGG + tig0019249:10209-10228 None:intergenic 55.0%
CGAGTTTGGAGGGGAAGGGA+GGG - tig0019249:8437-8456 Msa1371640:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - tig0019249:8438-8457 Msa1371640:intron 60.0%
AAGCCCCCCCCAAATGAGGA+GGG + tig0019249:8558-8577 None:intergenic 60.0%
AAAGCCCCCCCCAAATGAGG+AGG + tig0019249:8559-8578 None:intergenic 60.0%
TCCTCATTTGGGGGGGGCTT+TGG - tig0019249:8558-8577 Msa1371640:CDS 60.0%
CCTCATTTGGGGGGGGCTTT+GGG - tig0019249:8559-8578 Msa1371640:CDS 60.0%
CTCATTTGGGGGGGGCTTTG+GGG - tig0019249:8560-8579 Msa1371640:CDS 60.0%
!! AGGGAAGGCTCTGGAGGGTT+GGG + tig0019249:8808-8827 None:intergenic 60.0%
!! AAGGGAAGGCTCTGGAGGGT+TGG + tig0019249:8809-8828 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + tig0019249:8827-8846 None:intergenic 60.0%
AGCAGCGGCCAAACGAGCAT+TGG - tig0019249:9579-9598 Msa1371640:intron 60.0%
GCAGTTGAGCAACCAGGTGC+AGG - tig0019249:10194-10213 Msa1371640:CDS 60.0%
GTTGAGCAACCAGGTGCAGG+AGG - tig0019249:10197-10216 Msa1371640:CDS 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG - tig0019249:8436-8455 Msa1371640:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - tig0019249:8441-8460 Msa1371640:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - tig0019249:8442-8461 Msa1371640:intron 65.0%
CCCAAAGCCCCCCCCAAATG+AGG + tig0019249:8562-8581 None:intergenic 65.0%
!! GGGGAAGGGAAGGCTCTGGA+GGG + tig0019249:8813-8832 None:intergenic 65.0%
! AGGGGAAGGGAAGGCTCTGG+AGG + tig0019249:8814-8833 None:intergenic 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG + tig0019249:8823-8842 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + tig0019249:8828-8847 None:intergenic 65.0%
TGGCCGCTGCTTCAGTCTGC+AGG + tig0019249:9570-9589 None:intergenic 65.0%
TGGAGGGGAAGGGAGGGGAG+GGG - tig0019249:8443-8462 Msa1371640:intron 70.0%
GGGAGGGGAAGGGAAGGCTC+TGG + tig0019249:8817-8836 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0019249 gene 7189 10636 7189 ID=Msa1371640;Name=Msa1371640
tig0019249 mRNA 7189 10636 7189 ID=Msa1371640-mRNA-1;Parent=Msa1371640;Name=Msa1371640-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.75|1|1|1|4|281|505
tig0019249 exon 7189 8121 7189 ID=Msa1371640-mRNA-1:exon:2394;Parent=Msa1371640-mRNA-1
tig0019249 exon 8205 8251 8205 ID=Msa1371640-mRNA-1:exon:2393;Parent=Msa1371640-mRNA-1
tig0019249 exon 8531 8702 8531 ID=Msa1371640-mRNA-1:exon:2392;Parent=Msa1371640-mRNA-1
tig0019249 exon 9990 10636 9990 ID=Msa1371640-mRNA-1:exon:2391;Parent=Msa1371640-mRNA-1
tig0019249 CDS 9990 10636 9990 ID=Msa1371640-mRNA-1:cds;Parent=Msa1371640-mRNA-1
tig0019249 CDS 8531 8702 8531 ID=Msa1371640-mRNA-1:cds;Parent=Msa1371640-mRNA-1
tig0019249 CDS 8205 8251 8205 ID=Msa1371640-mRNA-1:cds;Parent=Msa1371640-mRNA-1
tig0019249 CDS 7470 8121 7470 ID=Msa1371640-mRNA-1:cds;Parent=Msa1371640-mRNA-1
tig0019249 three_prime_UTR 7189 7469 7189 ID=Msa1371640-mRNA-1:three_prime_utr;Parent=Msa1371640-mRNA-1
Gene Sequence

>Msa1371640

ATGGTTCTATCAAACAAAAAGCTTAAACAGAAGCTTAGAGCTGAATTAACCCTAAACCAGATTAACGCTGAATCTAATCCACCTTCTTCTTCTTCTTCTTCAAACTCTCTTAAACTTCTTATTAACTCTTCCACCAACAAACCCATTTTGTCTAAGCGCGAAAAACTCCGAAAGCTTCGACCTTTGCAACAAACTCAATCCAATGAAGATGATGGAACCAAAAACGAGGAAATTGGAAATGAGGGTTTCGGAAAGAAGAAGAACAAAAAGAGGAAAATGAAGGTAGAAGAGAAAGAAGATGAATCAATTGAAAAGAAGGAGAAGCAAAATAAGAAGAAGAAGAAGAAGAAGAAGAATGAAAATGGTGTGGCTAATGGGGTTGTGAAGAAGAGTGATGATGATGTGGCTAATGGGGTTGTGAAGAAGAATGATGATAGTGTTGCTAATGGGGTTGTTGTTGTTAAGGATGCAAAAAAATCAATGAAAAAGGAGAAGCAAAAGAAGAAGAATCAATTGAAGAAGAAGAGAAAGAAGAACAAAACTGCAGAGGAAAATGGTAAGGCCAAAATTGCAGAGGAGAATGATTCTAATCATCAAGAGGAAATGCCACAATCTACGGTATTGGCTAACACTACTACCACTACAAGTCAAGAAAATGGTGATGTTGCTACGAAAGTTTATGTTGGAGGAATTCCCTACTATTCAAGTGAGGATGACATTCACAGTTATTTTGAAGGCTGTGGCACCATCACTGAAATTAATTGCATGACTTTTCCTGACACTGGCAAGTTTAGGGGGATTGCCATAATTAGTTTTAAGACTGAAGCAGCGGCCAAACGAGCATTGGCTCTTGATGGAGCTGACATGGGAGGACTCTTTCTTAAAATTCAACCATGTAAAGCAACTCAAGCAACCCGATTTACTCCAGAAATGAAGGAGGGATATAATAGAATATATGTTGGAAGTCTGTCATGGGAAATAACAGAGGAAGAACTAAGGAAATTCTTCTCAAATTGCAATGTAAAGGCCATACGACTTGGTATGGACAAGGAAACGGGAGAATTTCGAGGGTATGCTCATGTTGATTTCAGTGATAGTCAGTCACTGAAGACAGCACTTGCATTGGACCAAAGTGTCTTGTTTGGAAGGCCTGTCAGGATAAGTTGTGCGGTTCCTTTGAACAAAAAACCCGTTGCAGGTTCCAAACCAGTTGCAGGTTCTAAACCAGGTGCAGGTGAAAAATCAGTTGCAGTTGAAAAACCAGGTGCAGGTGAAAAATCAATCGCAGTTGAAAAACCAGCTGCAGCTGAAAAATCAGTTGCTGGTGAAAAATCAGGTGCCGGTGAAAAATCATTTGCAGTTGAGCAACCAGGTGCAGGAGGAAAACCAACTGTTGAGCAACCAAGTTCTGTTGCAAGTGGAAAGAGGAAGAATAGAATGTGCTACGGGTGTCGTCAAAAAGGACATAATCTCTCAGAATGCCCAAACCCACAAATAGCTGCTTCTACTGCACTTTGA

Protein sequence

>Msa1371640

MVLSNKKLKQKLRAELTLNQINAESNPPSSSSSSNSLKLLINSSTNKPILSKREKLRKLRPLQQTQSNEDDGTKNEEIGNEGFGKKKNKKRKMKVEEKEDESIEKKEKQNKKKKKKKKNENGVANGVVKKSDDDVANGVVKKNDDSVANGVVVVKDAKKSMKKEKQKKKNQLKKKRKKNKTAEENGKAKIAEENDSNHQEEMPQSTVLANTTTTTSQENGDVATKVYVGGIPYYSSEDDIHSYFEGCGTITEINCMTFPDTGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPCKATQATRFTPEMKEGYNRIYVGSLSWEITEEELRKFFSNCNVKAIRLGMDKETGEFRGYAHVDFSDSQSLKTALALDQSVLFGRPVRISCAVPLNKKPVAGSKPVAGSKPGAGEKSVAVEKPGAGEKSIAVEKPAAAEKSVAGEKSGAGEKSFAVEQPGAGGKPTVEQPSSVASGKRKNRMCYGCRQKGHNLSECPNPQIAASTAL*