Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881580 | XP_003596904.1 | 80.000 | 250 | 2 | 1 | 1 | 202 | 1 | 250 | 3.14e-128 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881580 | G7IRF3 | 80.000 | 250 | 2 | 1 | 1 | 202 | 1 | 250 | 1.50e-128 | 371 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0881580 | 0.802912 | 4.478384e-49 | -8.615850e-47 |
| Msa0006880 | Msa0881580 | 0.810724 | 9.998117e-51 | -8.615850e-47 |
| Msa0008220 | Msa0881580 | 0.800097 | 1.690944e-48 | -8.615850e-47 |
| Msa0010770 | Msa0881580 | 0.813216 | 2.863557e-51 | -8.615850e-47 |
| Msa0015140 | Msa0881580 | 0.827911 | 1.204030e-54 | -8.615850e-47 |
| Msa0015680 | Msa0881580 | 0.836187 | 1.083659e-56 | -8.615850e-47 |
| Msa0027390 | Msa0881580 | 0.840951 | 6.379861e-58 | -8.615850e-47 |
| Msa0038000 | Msa0881580 | 0.816068 | 6.689848e-52 | -8.615850e-47 |
| Msa0038440 | Msa0881580 | 0.813287 | 2.763250e-51 | -8.615850e-47 |
| Msa0043500 | Msa0881580 | 0.804195 | 2.427615e-49 | -8.615850e-47 |
| Msa0045490 | Msa0881580 | 0.822302 | 2.547683e-53 | -8.615850e-47 |
| Msa0052860 | Msa0881580 | 0.800707 | 1.270475e-48 | -8.615850e-47 |
| Msa0055070 | Msa0881580 | 0.809498 | 1.836692e-50 | -8.615850e-47 |
| Msa0055150 | Msa0881580 | 0.807356 | 5.259828e-50 | -8.615850e-47 |
| Msa0055660 | Msa0881580 | 0.808851 | 2.527899e-50 | -8.615850e-47 |
| Msa0057140 | Msa0881580 | 0.818616 | 1.786152e-52 | -8.615850e-47 |
| Msa0057370 | Msa0881580 | 0.807400 | 5.149419e-50 | -8.615850e-47 |
| Msa0059890 | Msa0881580 | 0.808537 | 2.949657e-50 | -8.615850e-47 |
| Msa0070430 | Msa0881580 | 0.807449 | 5.026534e-50 | -8.615850e-47 |
| Msa0072170 | Msa0881580 | 0.800506 | 1.396169e-48 | -8.615850e-47 |
| Msa0077900 | Msa0881580 | 0.804151 | 2.479442e-49 | -8.615850e-47 |
| Msa0080830 | Msa0881580 | 0.806965 | 6.365299e-50 | -8.615850e-47 |
| Msa0090030 | Msa0881580 | 0.814799 | 1.281915e-51 | -8.615850e-47 |
| Msa0091500 | Msa0881580 | 0.826261 | 2.988851e-54 | -8.615850e-47 |
| Msa0096580 | Msa0881580 | 0.822481 | 2.314532e-53 | -8.615850e-47 |
| Msa0097950 | Msa0881580 | 0.851570 | 8.144799e-61 | -8.615850e-47 |
| Msa0101020 | Msa0881580 | 0.807348 | 5.282514e-50 | -8.615850e-47 |
| Msa0104610 | Msa0881580 | 0.817288 | 3.564306e-52 | -8.615850e-47 |
| Msa0108870 | Msa0881580 | 0.838817 | 2.295199e-57 | -8.615850e-47 |
| Msa0115460 | Msa0881580 | 0.829881 | 4.015596e-55 | -8.615850e-47 |
| Msa0610500 | Msa0881580 | 0.855431 | 6.337312e-62 | -8.615850e-47 |
| Msa0614510 | Msa0881580 | 0.833526 | 5.071523e-56 | -8.615850e-47 |
| Msa0618950 | Msa0881580 | 0.801341 | 9.423983e-49 | -8.615850e-47 |
| Msa0620330 | Msa0881580 | 0.855708 | 5.261298e-62 | -8.615850e-47 |
| Msa0626680 | Msa0881580 | 0.812865 | 3.418438e-51 | -8.615850e-47 |
| Msa0628290 | Msa0881580 | 0.813791 | 2.140042e-51 | -8.615850e-47 |
| Msa0641140 | Msa0881580 | 0.831020 | 2.115202e-55 | -8.615850e-47 |
| Msa0643250 | Msa0881580 | 0.819774 | 9.734258e-53 | -8.615850e-47 |
| Msa0646130 | Msa0881580 | 0.842410 | 2.629852e-58 | -8.615850e-47 |
| Msa0651150 | Msa0881580 | 0.853672 | 2.047186e-61 | -8.615850e-47 |
| Msa0652300 | Msa0881580 | 0.828044 | 1.118563e-54 | -8.615850e-47 |
| Msa0656580 | Msa0881580 | 0.811732 | 6.042701e-51 | -8.615850e-47 |
| Msa0662170 | Msa0881580 | 0.809894 | 1.509711e-50 | -8.615850e-47 |
| Msa0664760 | Msa0881580 | 0.815123 | 1.086081e-51 | -8.615850e-47 |
| Msa0677080 | Msa0881580 | 0.821365 | 4.196283e-53 | -8.615850e-47 |
| Msa0679100 | Msa0881580 | 0.821129 | 4.756446e-53 | -8.615850e-47 |
| Msa0679550 | Msa0881580 | 0.810527 | 1.102684e-50 | -8.615850e-47 |
| Msa0679680 | Msa0881580 | 0.817885 | 2.613841e-52 | -8.615850e-47 |
| Msa0686080 | Msa0881580 | 0.807442 | 5.045954e-50 | -8.615850e-47 |
| Msa0693100 | Msa0881580 | 0.805014 | 1.637742e-49 | -8.615850e-47 |
| Msa0694840 | Msa0881580 | 0.824877 | 6.361723e-54 | -8.615850e-47 |
| Msa0706390 | Msa0881580 | 0.817790 | 2.746174e-52 | -8.615850e-47 |
| Msa0715150 | Msa0881580 | 0.803047 | 4.200444e-49 | -8.615850e-47 |
| Msa0724150 | Msa0881580 | 0.801744 | 7.794065e-49 | -8.615850e-47 |
| Msa0726080 | Msa0881580 | 0.809594 | 1.751780e-50 | -8.615850e-47 |
| Msa0735310 | Msa0881580 | 0.804033 | 2.622737e-49 | -8.615850e-47 |
| Msa0737800 | Msa0881580 | 0.852041 | 5.985784e-61 | -8.615850e-47 |
| Msa0744090 | Msa0881580 | 0.871349 | 7.313730e-67 | -8.615850e-47 |
| Msa0744100 | Msa0881580 | 0.835556 | 1.566805e-56 | -8.615850e-47 |
| Msa0753770 | Msa0881580 | 0.811014 | 8.653736e-51 | -8.615850e-47 |
| Msa0756530 | Msa0881580 | 0.823007 | 1.746503e-53 | -8.615850e-47 |
| Msa0756930 | Msa0881580 | 0.854727 | 1.015045e-61 | -8.615850e-47 |
| Msa0764690 | Msa0881580 | 0.805719 | 1.165228e-49 | -8.615850e-47 |
| Msa0774750 | Msa0881580 | 0.807560 | 4.763079e-50 | -8.615850e-47 |
| Msa0781270 | Msa0881580 | 0.814911 | 1.210745e-51 | -8.615850e-47 |
| Msa0788110 | Msa0881580 | 0.813489 | 2.494600e-51 | -8.615850e-47 |
| Msa0794140 | Msa0881580 | 0.803894 | 2.803166e-49 | -8.615850e-47 |
| Msa0795660 | Msa0881580 | 0.812077 | 5.081650e-51 | -8.615850e-47 |
| Msa0796440 | Msa0881580 | 0.810459 | 1.140586e-50 | -8.615850e-47 |
| Msa0799580 | Msa0881580 | 0.817163 | 3.803307e-52 | -8.615850e-47 |
| Msa0814250 | Msa0881580 | 0.817240 | 3.653616e-52 | -8.615850e-47 |
| Msa0817260 | Msa0881580 | 0.848951 | 4.418367e-60 | -8.615850e-47 |
| Msa0817270 | Msa0881580 | 0.848866 | 4.665152e-60 | -8.615850e-47 |
| Msa0820250 | Msa0881580 | 0.812031 | 5.201793e-51 | -8.615850e-47 |
| Msa0820530 | Msa0881580 | -0.811135 | 8.143223e-51 | -8.615850e-47 |
| Msa0821800 | Msa0881580 | 0.812552 | 4.003619e-51 | -8.615850e-47 |
| Msa0822170 | Msa0881580 | 0.813645 | 2.304869e-51 | -8.615850e-47 |
| Msa0825270 | Msa0881580 | 0.834552 | 2.806037e-56 | -8.615850e-47 |
| Msa0825280 | Msa0881580 | 0.863880 | 1.815302e-64 | -8.615850e-47 |
| Msa0836500 | Msa0881580 | 0.814610 | 1.411575e-51 | -8.615850e-47 |
| Msa0126910 | Msa0881580 | 0.800414 | 1.457443e-48 | -8.615850e-47 |
| Msa0127850 | Msa0881580 | 0.805725 | 1.162118e-49 | -8.615850e-47 |
| Msa0131450 | Msa0881580 | 0.810041 | 1.403795e-50 | -8.615850e-47 |
| Msa0136380 | Msa0881580 | 0.801692 | 7.986197e-49 | -8.615850e-47 |
| Msa0140170 | Msa0881580 | 0.813957 | 1.967161e-51 | -8.615850e-47 |
| Msa0145110 | Msa0881580 | 0.818149 | 2.278364e-52 | -8.615850e-47 |
| Msa0146080 | Msa0881580 | 0.802446 | 5.587520e-49 | -8.615850e-47 |
| Msa0165300 | Msa0881580 | 0.841061 | 5.970943e-58 | -8.615850e-47 |
| Msa0168870 | Msa0881580 | 0.806080 | 9.785604e-50 | -8.615850e-47 |
| Msa0177230 | Msa0881580 | 0.807044 | 6.124565e-50 | -8.615850e-47 |
| Msa0179000 | Msa0881580 | 0.800450 | 1.433368e-48 | -8.615850e-47 |
| Msa0187490 | Msa0881580 | 0.803514 | 3.361977e-49 | -8.615850e-47 |
| Msa0187500 | Msa0881580 | 0.800628 | 1.318084e-48 | -8.615850e-47 |
| Msa0193540 | Msa0881580 | 0.831977 | 1.229176e-55 | -8.615850e-47 |
| Msa0198520 | Msa0881580 | 0.862200 | 5.995738e-64 | -8.615850e-47 |
| Msa0198530 | Msa0881580 | 0.875368 | 3.255584e-68 | -8.615850e-47 |
| Msa0221600 | Msa0881580 | 0.800889 | 1.166148e-48 | -8.615850e-47 |
| Msa0227230 | Msa0881580 | 0.828713 | 7.714303e-55 | -8.615850e-47 |
| Msa0229940 | Msa0881580 | 0.804768 | 1.843754e-49 | -8.615850e-47 |
| Msa0378970 | Msa0881580 | 0.825865 | 3.711819e-54 | -8.615850e-47 |
| Msa0381000 | Msa0881580 | 0.808422 | 3.121519e-50 | -8.615850e-47 |
| Msa0381080 | Msa0881580 | 0.803807 | 2.923022e-49 | -8.615850e-47 |
| Msa0387050 | Msa0881580 | 0.804499 | 2.097634e-49 | -8.615850e-47 |
| Msa0392200 | Msa0881580 | 0.822648 | 2.116722e-53 | -8.615850e-47 |
| Msa0410300 | Msa0881580 | 0.825063 | 5.748373e-54 | -8.615850e-47 |
| Msa0413730 | Msa0881580 | 0.801413 | 9.111496e-49 | -8.615850e-47 |
| Msa0419520 | Msa0881580 | 0.833750 | 4.456470e-56 | -8.615850e-47 |
| Msa0428170 | Msa0881580 | 0.826444 | 2.703553e-54 | -8.615850e-47 |
| Msa0431770 | Msa0881580 | 0.800378 | 1.482551e-48 | -8.615850e-47 |
| Msa0434770 | Msa0881580 | 0.800068 | 1.714030e-48 | -8.615850e-47 |
| Msa0439890 | Msa0881580 | 0.857144 | 1.993496e-62 | -8.615850e-47 |
| Msa0458780 | Msa0881580 | 0.815768 | 7.805220e-52 | -8.615850e-47 |
| Msa0461590 | Msa0881580 | 0.839864 | 1.227724e-57 | -8.615850e-47 |
| Msa0464900 | Msa0881580 | 0.824458 | 7.984383e-54 | -8.615850e-47 |
| Msa0474700 | Msa0881580 | 0.841952 | 3.477612e-58 | -8.615850e-47 |
| Msa0478580 | Msa0881580 | 0.816187 | 6.293736e-52 | -8.615850e-47 |
| Msa0480780 | Msa0881580 | 0.802271 | 6.071209e-49 | -8.615850e-47 |
| Msa0239940 | Msa0881580 | 0.864105 | 1.544420e-64 | -8.615850e-47 |
| Msa0245850 | Msa0881580 | 0.804879 | 1.747218e-49 | -8.615850e-47 |
| Msa0247060 | Msa0881580 | 0.812676 | 3.761134e-51 | -8.615850e-47 |
| Msa0259270 | Msa0881580 | 0.991894 | 3.897533e-190 | -8.615850e-47 |
| Msa0267870 | Msa0881580 | 0.858439 | 8.233349e-63 | -8.615850e-47 |
| Msa0274630 | Msa0881580 | 0.825205 | 5.322184e-54 | -8.615850e-47 |
| Msa0275400 | Msa0881580 | -0.804971 | 1.671860e-49 | -8.615850e-47 |
| Msa0276920 | Msa0881580 | 0.809816 | 1.569317e-50 | -8.615850e-47 |
| Msa0278790 | Msa0881580 | 0.831023 | 2.110953e-55 | -8.615850e-47 |
| Msa0282890 | Msa0881580 | 0.802678 | 5.006847e-49 | -8.615850e-47 |
| Msa0288730 | Msa0881580 | 0.819116 | 1.375039e-52 | -8.615850e-47 |
| Msa0289400 | Msa0881580 | 0.845114 | 4.968052e-59 | -8.615850e-47 |
| Msa0299330 | Msa0881580 | 0.820917 | 5.322621e-53 | -8.615850e-47 |
| Msa0308200 | Msa0881580 | 0.854299 | 1.350172e-61 | -8.615850e-47 |
| Msa0308220 | Msa0881580 | 0.853932 | 1.722350e-61 | -8.615850e-47 |
| Msa0310410 | Msa0881580 | 0.806232 | 9.088750e-50 | -8.615850e-47 |
| Msa0314060 | Msa0881580 | 0.827192 | 1.792187e-54 | -8.615850e-47 |
| Msa0314230 | Msa0881580 | 0.815615 | 8.441879e-52 | -8.615850e-47 |
| Msa0316940 | Msa0881580 | 0.806989 | 6.292992e-50 | -8.615850e-47 |
| Msa0317730 | Msa0881580 | 0.807749 | 4.340759e-50 | -8.615850e-47 |
| Msa0318720 | Msa0881580 | 0.841924 | 3.537524e-58 | -8.615850e-47 |
| Msa0320610 | Msa0881580 | 0.816531 | 5.271061e-52 | -8.615850e-47 |
| Msa0321190 | Msa0881580 | 0.813349 | 2.677988e-51 | -8.615850e-47 |
| Msa0324240 | Msa0881580 | 0.831923 | 1.267167e-55 | -8.615850e-47 |
| Msa0327410 | Msa0881580 | 0.835677 | 1.459676e-56 | -8.615850e-47 |
| Msa0342290 | Msa0881580 | 0.808948 | 2.409972e-50 | -8.615850e-47 |
| Msa0343190 | Msa0881580 | 0.840606 | 7.860267e-58 | -8.615850e-47 |
| Msa0346990 | Msa0881580 | 0.819626 | 1.052139e-52 | -8.615850e-47 |
| Msa0363620 | Msa0881580 | 0.803035 | 4.223623e-49 | -8.615850e-47 |
| Msa0484840 | Msa0881580 | 0.811270 | 7.613222e-51 | -8.615850e-47 |
| Msa0514610 | Msa0881580 | 0.813685 | 2.258267e-51 | -8.615850e-47 |
| Msa0518440 | Msa0881580 | 0.805651 | 1.204624e-49 | -8.615850e-47 |
| Msa0537770 | Msa0881580 | 0.803039 | 4.216074e-49 | -8.615850e-47 |
| Msa0541260 | Msa0881580 | 0.824177 | 9.294632e-54 | -8.615850e-47 |
| Msa0545060 | Msa0881580 | 0.812432 | 4.252840e-51 | -8.615850e-47 |
| Msa0546570 | Msa0881580 | 0.808537 | 2.950574e-50 | -8.615850e-47 |
| Msa0547400 | Msa0881580 | 0.812525 | 4.058761e-51 | -8.615850e-47 |
| Msa0549590 | Msa0881580 | 0.834310 | 3.228236e-56 | -8.615850e-47 |
| Msa0556790 | Msa0881580 | 0.816975 | 4.191117e-52 | -8.615850e-47 |
| Msa0573040 | Msa0881580 | 0.811215 | 7.826909e-51 | -8.615850e-47 |
| Msa0578090 | Msa0881580 | 0.821426 | 4.062496e-53 | -8.615850e-47 |
| Msa0580640 | Msa0881580 | 0.805478 | 1.309341e-49 | -8.615850e-47 |
| Msa0584550 | Msa0881580 | 0.829421 | 5.197663e-55 | -8.615850e-47 |
| Msa0586850 | Msa0881580 | 0.831341 | 1.763246e-55 | -8.615850e-47 |
| Msa0602120 | Msa0881580 | 0.803688 | 3.094015e-49 | -8.615850e-47 |
| Msa0844230 | Msa0881580 | 0.823156 | 1.611562e-53 | -8.615850e-47 |
| Msa0846230 | Msa0881580 | 0.802358 | 5.826146e-49 | -8.615850e-47 |
| Msa0851470 | Msa0881580 | 0.861349 | 1.091753e-63 | -8.615850e-47 |
| Msa0853950 | Msa0881580 | 0.806292 | 8.831496e-50 | -8.615850e-47 |
| Msa0856090 | Msa0881580 | 0.806941 | 6.441406e-50 | -8.615850e-47 |
| Msa0860650 | Msa0881580 | 0.820817 | 5.613304e-53 | -8.615850e-47 |
| Msa0861830 | Msa0881580 | 0.816134 | 6.466151e-52 | -8.615850e-47 |
| Msa0866400 | Msa0881580 | 0.822000 | 2.993430e-53 | -8.615850e-47 |
| Msa0873860 | Msa0881580 | 0.805582 | 1.245252e-49 | -8.615850e-47 |
| Msa0881580 | Msa0888940 | 0.816329 | 5.847943e-52 | -8.615850e-47 |
| Msa0881580 | Msa0896240 | 0.807875 | 4.082500e-50 | -8.615850e-47 |
| Msa0881580 | Msa0899350 | 0.864482 | 1.177881e-64 | -8.615850e-47 |
| Msa0881580 | Msa0906690 | 0.825108 | 5.610611e-54 | -8.615850e-47 |
| Msa0881580 | Msa0908170 | 0.817821 | 2.703091e-52 | -8.615850e-47 |
| Msa0881580 | Msa0939000 | 0.816511 | 5.324392e-52 | -8.615850e-47 |
| Msa0881580 | Msa0945840 | 0.806520 | 7.902950e-50 | -8.615850e-47 |
| Msa0881580 | Msa0957970 | 0.803450 | 3.465569e-49 | -8.615850e-47 |
| Msa0881580 | Msa0965020 | 0.848537 | 5.753091e-60 | -8.615850e-47 |
| Msa0881580 | Msa0972590 | 0.813222 | 2.855352e-51 | -8.615850e-47 |
| Msa0881580 | Msa0974370 | 0.811132 | 8.158596e-51 | -8.615850e-47 |
| Msa0881580 | Msa0975940 | 0.821991 | 3.007028e-53 | -8.615850e-47 |
| Msa0881580 | Msa0980940 | 0.828845 | 7.166478e-55 | -8.615850e-47 |
| Msa0881580 | Msa0981430 | 0.840073 | 1.083098e-57 | -8.615850e-47 |
| Msa0881580 | Msa0990590 | 0.816494 | 5.373309e-52 | -8.615850e-47 |
| Msa0881580 | Msa1021510 | 0.806438 | 8.226956e-50 | -8.615850e-47 |
| Msa0881580 | Msa1031770 | 0.820262 | 7.526348e-53 | -8.615850e-47 |
| Msa0881580 | Msa1031820 | 0.826907 | 2.096003e-54 | -8.615850e-47 |
| Msa0881580 | Msa1032170 | 0.815522 | 8.856543e-52 | -8.615850e-47 |
| Msa0881580 | Msa1040800 | 0.804158 | 2.470480e-49 | -8.615850e-47 |
| Msa0881580 | Msa1041520 | 0.816125 | 6.496014e-52 | -8.615850e-47 |
| Msa0881580 | Msa1050420 | 0.803951 | 2.728518e-49 | -8.615850e-47 |
| Msa0881580 | Msa1069820 | 0.818854 | 1.577172e-52 | -8.615850e-47 |
| Msa0881580 | Msa1070840 | 0.824996 | 5.963274e-54 | -8.615850e-47 |
| Msa0881580 | Msa1071660 | 0.810081 | 1.376174e-50 | -8.615850e-47 |
| Msa0881580 | Msa1073830 | 0.803372 | 3.597155e-49 | -8.615850e-47 |
| Msa0881580 | Msa1081560 | 0.801906 | 7.219559e-49 | -8.615850e-47 |
| Msa0881580 | Msa1087510 | -0.817604 | 3.025347e-52 | -8.615850e-47 |
| Msa0881580 | Msa1093330 | 0.835967 | 1.232733e-56 | -8.615850e-47 |
| Msa0881580 | Msa1105500 | 0.812344 | 4.444882e-51 | -8.615850e-47 |
| Msa0881580 | Msa1112390 | 0.802776 | 4.778468e-49 | -8.615850e-47 |
| Msa0881580 | Msa1113590 | 0.821973 | 3.037076e-53 | -8.615850e-47 |
| Msa0881580 | Msa1118760 | 0.808039 | 3.766668e-50 | -8.615850e-47 |
| Msa0881580 | Msa1125470 | 0.829410 | 5.228444e-55 | -8.615850e-47 |
| Msa0881580 | Msa1125550 | 0.835889 | 1.290108e-56 | -8.615850e-47 |
| Msa0881580 | Msa1127130 | 0.808577 | 2.893221e-50 | -8.615850e-47 |
| Msa0881580 | Msa1128330 | 0.836777 | 7.670978e-57 | -8.615850e-47 |
| Msa0881580 | Msa1130530 | 0.821277 | 4.398946e-53 | -8.615850e-47 |
| Msa0881580 | Msa1133400 | 0.809612 | 1.736026e-50 | -8.615850e-47 |
| Msa0881580 | Msa1157570 | 0.805795 | 1.123487e-49 | -8.615850e-47 |
| Msa0881580 | Msa1158660 | 0.842764 | 2.118294e-58 | -8.615850e-47 |
| Msa0881580 | Msa1158770 | 0.829736 | 4.356502e-55 | -8.615850e-47 |
| Msa0881580 | Msa1162830 | 0.820294 | 7.400587e-53 | -8.615850e-47 |
| Msa0881580 | Msa1164590 | 0.802642 | 5.093157e-49 | -8.615850e-47 |
| Msa0881580 | Msa1174850 | 0.810163 | 1.321649e-50 | -8.615850e-47 |
| Msa0881580 | Msa1178050 | 0.805705 | 1.173531e-49 | -8.615850e-47 |
| Msa0881580 | Msa1181170 | -0.816636 | 4.994338e-52 | -8.615850e-47 |
| Msa0881580 | Msa1192850 | 0.802173 | 6.359956e-49 | -8.615850e-47 |
| Msa0881580 | Msa1211050 | -0.819969 | 8.785696e-53 | -8.615850e-47 |
| Msa0881580 | Msa1214880 | 0.811399 | 7.137529e-51 | -8.615850e-47 |
| Msa0881580 | Msa1226610 | 0.805549 | 1.265272e-49 | -8.615850e-47 |
| Msa0881580 | Msa1230040 | 0.801867 | 7.354153e-49 | -8.615850e-47 |
| Msa0881580 | Msa1240340 | 0.827136 | 1.848420e-54 | -8.615850e-47 |
| Msa0881580 | Msa1280620 | 0.842573 | 2.380772e-58 | -8.615850e-47 |
| Msa0881580 | Msa1286550 | 0.804214 | 2.405007e-49 | -8.615850e-47 |
| Msa0881580 | Msa1294080 | 0.803673 | 3.116106e-49 | -8.615850e-47 |
| Msa0881580 | Msa1295910 | 0.802246 | 6.144126e-49 | -8.615850e-47 |
| Msa0881580 | Msa1300860 | 0.808038 | 3.767830e-50 | -8.615850e-47 |
| Msa0881580 | Msa1306390 | 0.805886 | 1.074961e-49 | -8.615850e-47 |
| Msa0881580 | Msa1331910 | 0.816523 | 5.293362e-52 | -8.615850e-47 |
| Msa0881580 | Msa1331920 | 0.807525 | 4.843657e-50 | -8.615850e-47 |
| Msa0881580 | Msa1340040 | -0.829998 | 3.761502e-55 | -8.615850e-47 |
| Msa0881580 | Msa1340830 | 0.820205 | 7.754804e-53 | -8.615850e-47 |
| Msa0881580 | Msa1341490 | 0.826040 | 3.374039e-54 | -8.615850e-47 |
| Msa0881580 | Msa1355700 | 0.817560 | 3.095186e-52 | -8.615850e-47 |
| Msa0881580 | Msa1357080 | 0.828999 | 6.576697e-55 | -8.615850e-47 |
| Msa0881580 | Msa1363700 | 0.817035 | 4.063424e-52 | -8.615850e-47 |
| Msa0881580 | Msa1366300 | 0.805123 | 1.553541e-49 | -8.615850e-47 |
| Msa0881580 | Msa1371090 | 0.811903 | 5.546160e-51 | -8.615850e-47 |
| Msa0881580 | Msa1371640 | 0.802902 | 4.499326e-49 | -8.615850e-47 |
| Msa0881580 | Msa1372310 | 0.805702 | 1.175284e-49 | -8.615850e-47 |
| Msa0881580 | Msa1376200 | 0.808534 | 2.954775e-50 | -8.615850e-47 |
| Msa0881580 | Msa1386230 | 0.826341 | 2.860708e-54 | -8.615850e-47 |
| Msa0881580 | Msa1389680 | 0.809401 | 1.926624e-50 | -8.615850e-47 |
| Msa0881580 | Msa1390230 | 0.811062 | 8.445565e-51 | -8.615850e-47 |
| Msa0881580 | Msa1393800 | 0.803275 | 3.767417e-49 | -8.615850e-47 |
| Msa0881580 | Msa1402270 | 0.811689 | 6.175543e-51 | -8.615850e-47 |
| Msa0881580 | Msa1404540 | 0.805169 | 1.519963e-49 | -8.615850e-47 |
| Msa0881580 | Msa1408760 | -0.812096 | 5.035007e-51 | -8.615850e-47 |
| Msa0881580 | Msa1412930 | -0.801933 | 7.125589e-49 | -8.615850e-47 |
| Msa0881580 | Msa1415940 | 0.808681 | 2.747721e-50 | -8.615850e-47 |
| Msa0881580 | Msa1422840 | 0.817021 | 4.091803e-52 | -8.615850e-47 |
| Msa0881580 | Msa1426570 | 0.825296 | 5.065766e-54 | -8.615850e-47 |
| Msa0881580 | Msa1431060 | 0.814571 | 1.439945e-51 | -8.615850e-47 |
| Msa0881580 | Msa1433220 | 0.811135 | 8.143223e-51 | -8.615850e-47 |
| Msa0881580 | Msa1435400 | 0.802363 | 5.813979e-49 | -8.615850e-47 |
| Msa0881580 | Msa1435770 | 0.820954 | 5.219566e-53 | -8.615850e-47 |
| Msa0881580 | Msa1442220 | -0.801210 | 1.002707e-48 | -8.615850e-47 |
| Msa0881580 | Msa1452480 | 0.819905 | 9.084962e-53 | -8.615850e-47 |
| Msa0881580 | Msa1466090 | 0.803868 | 2.838634e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881580 | MtrunA17_Chr2g0322111 | 80.000 | 250 | 2 | 1 | 1 | 202 | 1 | 250 | 2.89e-132 | 371 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881580 | AT5G22080.1 | 64.000 | 250 | 38 | 2 | 1 | 202 | 1 | 246 | 2.87e-88 | 260 |
| Msa0881580 | AT5G22080.2 | 58.400 | 250 | 34 | 3 | 1 | 202 | 1 | 228 | 1.77e-72 | 219 |
Find 57 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGATAATCTCTTTCATT+TGG | 0.308784 | 6_1:-28860262 | None:intergenic |
| GTTATGGCTGTAGAACAAAA+AGG | 0.310225 | 6_1:+28863492 | Msa0881580:intron |
| GGATCTTCTGTCTTGAGCTT+AGG | 0.323629 | 6_1:-28863529 | None:intergenic |
| GATCTTCTGTCTTGAGCTTA+GGG | 0.328340 | 6_1:-28863528 | None:intergenic |
| AGGAGGAACAGAAAGAAATA+TGG | 0.344165 | 6_1:+28861719 | Msa0881580:CDS |
| CCTATGTATCAATCAGTACT+AGG | 0.345510 | 6_1:-28863751 | None:intergenic |
| AATATCAATCAGTATTCATT+TGG | 0.350105 | 6_1:-28863724 | None:intergenic |
| TTGTAATGATGTTTATCTCT+AGG | 0.406494 | 6_1:+28863668 | Msa0881580:three_prime_UTR |
| CTCTGAACGTAGGATTTGTT+AGG | 0.406859 | 6_1:-28863550 | None:intergenic |
| AGCCAAGTTAATTCAGCAAA+AGG | 0.416672 | 6_1:+28860286 | Msa0881580:CDS |
| ACTTTGAGTTTCTGAGAATA+CGG | 0.435583 | 6_1:-28858230 | None:intergenic |
| AATCATGCATATAGGTTACC+TGG | 0.444107 | 6_1:-28863937 | None:intergenic |
| AGTTGTATTGCCTTTACAAT+GGG | 0.448292 | 6_1:+28863786 | Msa0881580:three_prime_UTR |
| GGGAAGGAACAAGAGAAAAG+AGG | 0.454577 | 6_1:+28861770 | Msa0881580:CDS |
| TCTAATAAAACCCATTGTAA+AGG | 0.460675 | 6_1:-28863796 | None:intergenic |
| TGTAATGATGTTTATCTCTA+GGG | 0.463926 | 6_1:+28863669 | Msa0881580:three_prime_UTR |
| ATCAATCAGTATTCATTTGG+AGG | 0.478356 | 6_1:-28863721 | None:intergenic |
| TCAGTGTCTAACCTAAAATC+TGG | 0.483622 | 6_1:-28863863 | None:intergenic |
| GGTCATGAGAGGCATGTCAT+TGG | 0.493452 | 6_1:+28863690 | Msa0881580:three_prime_UTR |
| TCACAGGCAATCTATCCAAC+AGG | 0.494116 | 6_1:+28863601 | Msa0881580:three_prime_UTR |
| CCTAGTACTGATTGATACAT+AGG | 0.494728 | 6_1:+28863751 | Msa0881580:three_prime_UTR |
| TATATATACCTCATCAACTA+AGG | 0.499356 | 6_1:-28860891 | None:intergenic |
| GCGTGAACATGAAGAGGAAT+GGG | 0.499626 | 6_1:+28861750 | Msa0881580:CDS |
| GGAAGGAACAAGAGAAAAGA+GGG | 0.509568 | 6_1:+28861771 | Msa0881580:CDS |
| AGGCTAGGGTGTTTGGTCAC+AGG | 0.509832 | 6_1:+28863585 | Msa0881580:exon |
| GAGAAAGAAACATCTGAAGA+AGG | 0.511918 | 6_1:+28860847 | Msa0881580:CDS |
| CTTCATAAAATCTCTCCAGC+TGG | 0.512693 | 6_1:-28863355 | None:intergenic |
| AGCGTGAACATGAAGAGGAA+TGG | 0.512830 | 6_1:+28861749 | Msa0881580:CDS |
| GCTCACTGCAAGCAGATGAC+TGG | 0.521276 | 6_1:-28863841 | None:intergenic |
| CACTTCATCAGGTATCCAGC+TGG | 0.522430 | 6_1:+28863340 | Msa0881580:intron |
| AAAGAGACAATGAAGTCCTC+AGG | 0.532848 | 6_1:+28858377 | Msa0881580:CDS |
| AAGTTGTATTGCCTTTACAA+TGG | 0.532894 | 6_1:+28863785 | Msa0881580:three_prime_UTR |
| TCATCTTCGATGATGGTGGA+TGG | 0.533141 | 6_1:-28858313 | None:intergenic |
| CAATATCAAACTGACACAAA+GGG | 0.542607 | 6_1:-28863648 | None:intergenic |
| AAGTAAATCATCTTCGATGA+TGG | 0.548035 | 6_1:-28858320 | None:intergenic |
| CATCTTCGATGATGGTGGAT+GGG | 0.561494 | 6_1:-28858312 | None:intergenic |
| CTGTAATGACTGTCGTTCAA+AGG | 0.564182 | 6_1:+28858190 | Msa0881580:five_prime_UTR |
| AAGAAAGCGTGAACATGAAG+AGG | 0.566688 | 6_1:+28861744 | Msa0881580:CDS |
| GACACAAAGGGCGCATGGCT+AGG | 0.574286 | 6_1:-28863636 | None:intergenic |
| AATGAAGTCCTTAGTTGATG+AGG | 0.574884 | 6_1:+28860883 | Msa0881580:CDS |
| CTATGTATCAATCAGTACTA+GGG | 0.578778 | 6_1:-28863750 | None:intergenic |
| ATCTTCTGTCTTGAGCTTAG+GGG | 0.581558 | 6_1:-28863527 | None:intergenic |
| ACAATATCAAACTGACACAA+AGG | 0.582509 | 6_1:-28863649 | None:intergenic |
| CTAACAAATCCTACGTTCAG+AGG | 0.583252 | 6_1:+28863551 | Msa0881580:CDS |
| TCTTCTGTCTTGAGCTTAGG+GGG | 0.583605 | 6_1:-28863526 | None:intergenic |
| TGATAAGCAATATGAACAGT+CGG | 0.586242 | 6_1:+28861153 | Msa0881580:CDS |
| TAAATCATCTTCGATGATGG+TGG | 0.589520 | 6_1:-28858317 | None:intergenic |
| ATCATGCATATAGGTTACCT+GGG | 0.599095 | 6_1:-28863936 | None:intergenic |
| AAACTGACACAAAGGGCGCA+TGG | 0.611823 | 6_1:-28863641 | None:intergenic |
| CCGCTTAATGTAAAATACCC+AGG | 0.628437 | 6_1:+28863919 | Msa0881580:three_prime_UTR |
| AGTACTGATTGATACATAGG+AGG | 0.632795 | 6_1:+28863754 | Msa0881580:three_prime_UTR |
| ATGTAGATATCCGAGGAGGA+AGG | 0.639180 | 6_1:+28861679 | Msa0881580:intron |
| ACAGTCGGAAGAATTCAAGC+AGG | 0.661666 | 6_1:+28861168 | Msa0881580:CDS |
| AAATATTATGTAGATATCCG+AGG | 0.665580 | 6_1:+28861672 | Msa0881580:intron |
| GAACATGAAGAGGAATGGGA+AGG | 0.666125 | 6_1:+28861754 | Msa0881580:CDS |
| TTTATCTCTAGGGTCATGAG+AGG | 0.669693 | 6_1:+28863679 | Msa0881580:three_prime_UTR |
| TATTATGTAGATATCCGAGG+AGG | 0.732877 | 6_1:+28861675 | Msa0881580:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATATTATTATTTAGAC+AGG | + | chr6_1:28859642-28859661 | Msa0881580:intron | 10.0% |
| !! | ATAATATTTAATAAGCTAAA+AGG | - | chr6_1:28861661-28861680 | None:intergenic | 10.0% |
| !! | TATAAAATGAAGTTTAAATA+TGG | - | chr6_1:28861810-28861829 | None:intergenic | 10.0% |
| !!! | ATACATTTTAAAATTTTAGA+TGG | + | chr6_1:28862324-28862343 | Msa0881580:intron | 10.0% |
| !! | AAATAAAGAAATTAGGTTAT+TGG | + | chr6_1:28858499-28858518 | Msa0881580:intron | 15.0% |
| !! | AATAAAGAAATTAGGTTATT+GGG | + | chr6_1:28858500-28858519 | Msa0881580:intron | 15.0% |
| !!! | TGTTTTATTATTATTCAAAG+TGG | + | chr6_1:28859355-28859374 | Msa0881580:intron | 15.0% |
| !!! | TTTTTTAACATATTGAAGAA+TGG | + | chr6_1:28860101-28860120 | Msa0881580:intron | 15.0% |
| !!! | TACTATTTTTATCAATCTAA+TGG | + | chr6_1:28860442-28860461 | Msa0881580:intron | 15.0% |
| !!! | TACTTATTTTTAATAAGCAA+GGG | - | chr6_1:28861108-28861127 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTGAAAAAAGT+TGG | + | chr6_1:28862206-28862225 | Msa0881580:intron | 15.0% |
| !!! | ATTTTAAAATTTTAGATGGT+GGG | + | chr6_1:28862328-28862347 | Msa0881580:intron | 15.0% |
| !! | TTCAAAAAAAAAAAAACACT+AGG | - | chr6_1:28862559-28862578 | None:intergenic | 15.0% |
| !!! | TAGTGTTTTTTTTTTTTTGA+AGG | + | chr6_1:28862558-28862577 | Msa0881580:intron | 15.0% |
| !!! | TCTCATTTTATGAAATTTAT+TGG | - | chr6_1:28863051-28863070 | None:intergenic | 15.0% |
| !!! | ATTTAGAACGTATTTTTATA+GGG | - | chr6_1:28863234-28863253 | None:intergenic | 15.0% |
| !!! | AATTTAGAACGTATTTTTAT+AGG | - | chr6_1:28863235-28863254 | None:intergenic | 15.0% |
| !!! | TAAAAATACGTTCTAAATTA+TGG | + | chr6_1:28863236-28863255 | Msa0881580:intron | 15.0% |
| !!! | ATTTGGACATTTTTTATGTT+TGG | + | chr6_1:28858450-28858469 | Msa0881580:intron | 20.0% |
| !! | ATGCTGAAAATAAAGAAATT+AGG | + | chr6_1:28858492-28858511 | Msa0881580:intron | 20.0% |
| !! | GTTTCTCTTAAAAAAATTCT+AGG | - | chr6_1:28859027-28859046 | None:intergenic | 20.0% |
| !! | CCTCTTATAAAATTATCTTT+GGG | + | chr6_1:28859242-28859261 | Msa0881580:intron | 20.0% |
| !!! | TTTAGTTACAATGTTGTTTA+GGG | + | chr6_1:28859449-28859468 | Msa0881580:intron | 20.0% |
| !! | TACTGTAGGATAATATATAT+TGG | + | chr6_1:28859513-28859532 | Msa0881580:intron | 20.0% |
| !! | ATTATTTAGACAGGAAAATT+TGG | + | chr6_1:28859651-28859670 | Msa0881580:intron | 20.0% |
| !! | ATTCTATAAATTTCCTTCTT+AGG | - | chr6_1:28859896-28859915 | None:intergenic | 20.0% |
| !! | AAATTTATAGAATCTACCTT+AGG | + | chr6_1:28859903-28859922 | Msa0881580:intron | 20.0% |
| !! | ATTGATAAAAATAGTAAACC+AGG | - | chr6_1:28860438-28860457 | None:intergenic | 20.0% |
| !!! | AAACCTAAAACCTTTTAATT+CGG | + | chr6_1:28860654-28860673 | Msa0881580:intron | 20.0% |
| !!! | AGGTATATATAGTTTTGTTA+GGG | + | chr6_1:28860903-28860922 | Msa0881580:intron | 20.0% |
| !!! | GTACTTATTTTTAATAAGCA+AGG | - | chr6_1:28861109-28861128 | None:intergenic | 20.0% |
| !!! | AAGTACTTTATTTCTTTATC+AGG | + | chr6_1:28861123-28861142 | Msa0881580:intron | 20.0% |
| !!! | AGTACTTTATTTCTTTATCA+GGG | + | chr6_1:28861124-28861143 | Msa0881580:intron | 20.0% |
| !! | AACTATTAACAGAAAAAGAA+TGG | + | chr6_1:28861212-28861231 | Msa0881580:CDS | 20.0% |
| !! | CATTAAAAATTCTGTTATTG+TGG | + | chr6_1:28861466-28861485 | Msa0881580:intron | 20.0% |
| !! | TCTGTTTATCTATGTAAATT+TGG | + | chr6_1:28861594-28861613 | Msa0881580:intron | 20.0% |
| !! | CAGAAAAATATTTGAATTGA+AGG | + | chr6_1:28862038-28862057 | Msa0881580:intron | 20.0% |
| !!! | TTCAATTCTAAGATTTTCTT+AGG | + | chr6_1:28862130-28862149 | Msa0881580:intron | 20.0% |
| !!! | CATTTTAAAATTTTAGATGG+TGG | + | chr6_1:28862327-28862346 | Msa0881580:intron | 20.0% |
| !!! | ACATTTCTAGGAATAATTTT+GGG | + | chr6_1:28862618-28862637 | Msa0881580:intron | 20.0% |
| !!! | TGTATATTTTGTTTGTTACA+TGG | + | chr6_1:28862644-28862663 | Msa0881580:intron | 20.0% |
| !!! | AAGTTATCTAAAATCATTCT+TGG | - | chr6_1:28862823-28862842 | None:intergenic | 20.0% |
| !!! | TGATTTTAGATAACTTGATA+CGG | + | chr6_1:28862827-28862846 | Msa0881580:intron | 20.0% |
| !! | ATTTCAGTACTAAATAAAGT+TGG | - | chr6_1:28862888-28862907 | None:intergenic | 20.0% |
| !!! | CTAACATTACATTTTTGTTA+TGG | + | chr6_1:28863476-28863495 | Msa0881580:intron | 20.0% |
| !! | AATATCAATCAGTATTCATT+TGG | - | chr6_1:28863727-28863746 | None:intergenic | 20.0% |
| !!! | ATTTTTTAGGGTTTTCTTTC+AGG | - | chr6_1:28858280-28858299 | None:intergenic | 25.0% |
| ! | TGAAAGAAAACCCTAAAAAA+TGG | + | chr6_1:28858279-28858298 | Msa0881580:exon | 25.0% |
| ! | GAAAGAAAACCCTAAAAAAT+GGG | + | chr6_1:28858280-28858299 | Msa0881580:exon | 25.0% |
| !!! | TTTGATTCTCCCATTTTTTA+GGG | - | chr6_1:28858292-28858311 | None:intergenic | 25.0% |
| !!! | TGTTTTTGGAGTATTTGATT+TGG | + | chr6_1:28858433-28858452 | Msa0881580:intron | 25.0% |
| !!! | TTCATTTTTCCAATTTGTAG+CGG | + | chr6_1:28858792-28858811 | Msa0881580:intron | 25.0% |
| ! | TTGACAATATTAGAAAAAGC+TGG | + | chr6_1:28858868-28858887 | Msa0881580:intron | 25.0% |
| ! | TGACAATATTAGAAAAAGCT+GGG | + | chr6_1:28858869-28858888 | Msa0881580:intron | 25.0% |
| ! | TATAAAAGATGGTAGAAACA+AGG | + | chr6_1:28858905-28858924 | Msa0881580:intron | 25.0% |
| ! | TTTAAGAGAAACTAGTAAGA+AGG | + | chr6_1:28859035-28859054 | Msa0881580:intron | 25.0% |
| !! | TACGTATTAATAAGTTGGAT+AGG | + | chr6_1:28859061-28859080 | Msa0881580:intron | 25.0% |
| !! | ACGTATTAATAAGTTGGATA+GGG | + | chr6_1:28859062-28859081 | Msa0881580:intron | 25.0% |
| ! | TATATGACAAGACATTATGA+TGG | + | chr6_1:28859091-28859110 | Msa0881580:intron | 25.0% |
| ! | GTTTATGTTAAATGTTCTGT+TGG | + | chr6_1:28859219-28859238 | Msa0881580:intron | 25.0% |
| ! | GCCTCTTATAAAATTATCTT+TGG | + | chr6_1:28859241-28859260 | Msa0881580:intron | 25.0% |
| !! | CCCAAAGATAATTTTATAAG+AGG | - | chr6_1:28859245-28859264 | None:intergenic | 25.0% |
| ! | GAAACAAGAAATAAACAATG+AGG | - | chr6_1:28859405-28859424 | None:intergenic | 25.0% |
| ! | ATGTAACTAAATATCGTACA+AGG | - | chr6_1:28859427-28859446 | None:intergenic | 25.0% |
| !! | CTTTAGTTACAATGTTGTTT+AGG | + | chr6_1:28859448-28859467 | Msa0881580:intron | 25.0% |
| ! | TTTAGTGTAAAACTATGAGA+TGG | - | chr6_1:28859768-28859787 | None:intergenic | 25.0% |
| ! | ATTGAGACAATATGTAATAC+TGG | - | chr6_1:28859799-28859818 | None:intergenic | 25.0% |
| !!! | AATGGAATAAAAAGTACCTA+AGG | - | chr6_1:28859922-28859941 | None:intergenic | 25.0% |
| !!! | ATTCCATTCAAGTGTTATTT+TGG | + | chr6_1:28859934-28859953 | Msa0881580:intron | 25.0% |
| ! | TCATGCTAAGAGTTAAAAAT+GGG | - | chr6_1:28860016-28860035 | None:intergenic | 25.0% |
| ! | ATCATGCTAAGAGTTAAAAA+TGG | - | chr6_1:28860017-28860036 | None:intergenic | 25.0% |
| ! | AGAAGATAATCTCTTTCATT+TGG | - | chr6_1:28860265-28860284 | None:intergenic | 25.0% |
| ! | TTAATGATCTTCTAGCATTT+GGG | - | chr6_1:28860491-28860510 | None:intergenic | 25.0% |
| ! | ATTAATGATCTTCTAGCATT+TGG | - | chr6_1:28860492-28860511 | None:intergenic | 25.0% |
| !!! | AACCTAAAACCTTTTAATTC+GGG | + | chr6_1:28860655-28860674 | Msa0881580:intron | 25.0% |
| ! | AAAAATAGACCCGAATTAAA+AGG | - | chr6_1:28860667-28860686 | None:intergenic | 25.0% |
| ! | ATGGAGATAAGAAAAAAACA+GGG | - | chr6_1:28860730-28860749 | None:intergenic | 25.0% |
| ! | AATGGAGATAAGAAAAAAAC+AGG | - | chr6_1:28860731-28860750 | None:intergenic | 25.0% |
| ! | TATATATACCTCATCAACTA+AGG | - | chr6_1:28860894-28860913 | None:intergenic | 25.0% |
| !!! | GAGGTATATATAGTTTTGTT+AGG | + | chr6_1:28860902-28860921 | Msa0881580:intron | 25.0% |
| !! | GTGTGAGTATATTTCATTTT+TGG | + | chr6_1:28860971-28860990 | Msa0881580:intron | 25.0% |
| ! | TATTAACAGAAAAAGAATGG+AGG | + | chr6_1:28861215-28861234 | Msa0881580:CDS | 25.0% |
| !!! | ACATGATGATCATTTTTACT+AGG | + | chr6_1:28861381-28861400 | Msa0881580:intron | 25.0% |
| ! | AAATATTATGTAGATATCCG+AGG | + | chr6_1:28861672-28861691 | Msa0881580:intron | 25.0% |
| ! | AGCTTAGTTATAGATTTCAT+AGG | - | chr6_1:28861897-28861916 | None:intergenic | 25.0% |
| ! | CACAGAATACAAATATCATT+TGG | - | chr6_1:28861941-28861960 | None:intergenic | 25.0% |
| !! | AAGATTTTCTTAGGAATCAT+AGG | + | chr6_1:28862139-28862158 | Msa0881580:intron | 25.0% |
| ! | TAATCATGGTGGTAATATTT+GGG | + | chr6_1:28862165-28862184 | Msa0881580:intron | 25.0% |
| ! | TTCGATTAACCTACAAAAAT+GGG | - | chr6_1:28862245-28862264 | None:intergenic | 25.0% |
| ! | ATTCGATTAACCTACAAAAA+TGG | - | chr6_1:28862246-28862265 | None:intergenic | 25.0% |
| !!! | TTTTAGAAAACTGATCATGT+AGG | - | chr6_1:28862387-28862406 | None:intergenic | 25.0% |
| ! | CATAGTGGTAAAAATTAACA+TGG | + | chr6_1:28862448-28862467 | Msa0881580:intron | 25.0% |
| !!! | ATAAAGAGATACCTTTTTTC+AGG | - | chr6_1:28862498-28862517 | None:intergenic | 25.0% |
| ! | AGAAATCTAAACACATTTCT+AGG | + | chr6_1:28862606-28862625 | Msa0881580:intron | 25.0% |
| !!! | CACATTTCTAGGAATAATTT+TGG | + | chr6_1:28862617-28862636 | Msa0881580:intron | 25.0% |
| ! | TTGATGCAAACAATGAAAAT+GGG | - | chr6_1:28862719-28862738 | None:intergenic | 25.0% |
| !! | TTATCTAAAATCATTCTTGG+TGG | - | chr6_1:28862820-28862839 | None:intergenic | 25.0% |
| ! | CATTCCATTATTAGAAGAAT+TGG | + | chr6_1:28862910-28862929 | Msa0881580:intron | 25.0% |
| ! | CAGTCTAAAAGTAATCAAAA+TGG | + | chr6_1:28863176-28863195 | Msa0881580:intron | 25.0% |
| ! | TTGTCAGAAAAATTTCATGT+CGG | + | chr6_1:28863277-28863296 | Msa0881580:intron | 25.0% |
| ! | TTGTAATGATGTTTATCTCT+AGG | + | chr6_1:28863668-28863687 | Msa0881580:three_prime_UTR | 25.0% |
| ! | TGTAATGATGTTTATCTCTA+GGG | + | chr6_1:28863669-28863688 | Msa0881580:three_prime_UTR | 25.0% |
| ! | TCTAATAAAACCCATTGTAA+AGG | - | chr6_1:28863799-28863818 | None:intergenic | 25.0% |
| !!! | CGTTTTAAAATCATGCATAT+AGG | - | chr6_1:28863948-28863967 | None:intergenic | 25.0% |
| ! | ACTTTGAGTTTCTGAGAATA+CGG | - | chr6_1:28858233-28858252 | None:intergenic | 30.0% |
| !!! | GTTTGATTCTCCCATTTTTT+AGG | - | chr6_1:28858293-28858312 | None:intergenic | 30.0% |
| AAGTAAATCATCTTCGATGA+TGG | - | chr6_1:28858323-28858342 | None:intergenic | 30.0% | |
| !! | TTGTTTTTCGCTTTCTGATT+AGG | + | chr6_1:28858405-28858424 | Msa0881580:intron | 30.0% |
| ! | TGTTTTTCGCTTTCTGATTA+GGG | + | chr6_1:28858406-28858425 | Msa0881580:intron | 30.0% |
| !!! | CTGATTAGGGATTTTGTTTT+TGG | + | chr6_1:28858419-28858438 | Msa0881580:intron | 30.0% |
| !!! | TTTTTTTGTTGACAGGATTC+TGG | + | chr6_1:28858572-28858591 | Msa0881580:intron | 30.0% |
| !!! | TTTTTTGTTGACAGGATTCT+GGG | + | chr6_1:28858573-28858592 | Msa0881580:intron | 30.0% |
| GATAGGTTTAAATGCTCAAA+CGG | - | chr6_1:28858615-28858634 | None:intergenic | 30.0% | |
| CAATAGATGAATCAAACGAT+AGG | - | chr6_1:28858632-28858651 | None:intergenic | 30.0% | |
| ! | TCTACCATCTTTTATACGAA+AGG | - | chr6_1:28858901-28858920 | None:intergenic | 30.0% |
| ! | TCTTTTGCAGATATCATTGA+TGG | + | chr6_1:28859268-28859287 | Msa0881580:intron | 30.0% |
| TAAACTTTACAACTAAAGCG+AGG | + | chr6_1:28859595-28859614 | Msa0881580:intron | 30.0% | |
| TAGTGGAAGATAACTTCAAA+AGG | + | chr6_1:28859710-28859729 | Msa0881580:intron | 30.0% | |
| TAACCAACATATCAGTGTAT+TGG | - | chr6_1:28859862-28859881 | None:intergenic | 30.0% | |
| TACATATATGATGCCTAAGA+AGG | + | chr6_1:28859880-28859899 | Msa0881580:intron | 30.0% | |
| CAACCAAAATAACACTTGAA+TGG | - | chr6_1:28859940-28859959 | None:intergenic | 30.0% | |
| TGATAATTTCTGCAACATGA+TGG | + | chr6_1:28860149-28860168 | Msa0881580:intron | 30.0% | |
| ! | AACCTTTTGCTGAATTAACT+TGG | - | chr6_1:28860291-28860310 | None:intergenic | 30.0% |
| AGTGCAAATTACTTCTACTA+AGG | + | chr6_1:28860358-28860377 | Msa0881580:intron | 30.0% | |
| GTGCAAATTACTTCTACTAA+GGG | + | chr6_1:28860359-28860378 | Msa0881580:intron | 30.0% | |
| GCATTTGGGAAAAAATAATG+AGG | - | chr6_1:28860477-28860496 | None:intergenic | 30.0% | |
| ! | TTGAGGTTGAAAGTTTTTGT+TGG | + | chr6_1:28860554-28860573 | Msa0881580:intron | 30.0% |
| ! | TGAGGTTGAAAGTTTTTGTT+GGG | + | chr6_1:28860555-28860574 | Msa0881580:intron | 30.0% |
| TGGAGATAAGAAAAAAACAG+GGG | - | chr6_1:28860729-28860748 | None:intergenic | 30.0% | |
| CAGACATTTCTTCTATACAA+TGG | - | chr6_1:28860749-28860768 | None:intergenic | 30.0% | |
| AAATGTCTGTGTAGAAACAA+GGG | + | chr6_1:28860760-28860779 | Msa0881580:intron | 30.0% | |
| !! | AACTAAGGACTTCATTTTTG+AGG | - | chr6_1:28860879-28860898 | None:intergenic | 30.0% |
| AAGCTTACATGATCAAATTC+TGG | - | chr6_1:28861057-28861076 | None:intergenic | 30.0% | |
| TGATAAGCAATATGAACAGT+CGG | + | chr6_1:28861153-28861172 | Msa0881580:CDS | 30.0% | |
| GAGAAGAAAAATGCAAATGA+GGG | + | chr6_1:28861237-28861256 | Msa0881580:CDS | 30.0% | |
| !! | GTGATTAGGTGCTTTTTAAA+AGG | + | chr6_1:28861420-28861439 | Msa0881580:intron | 30.0% |
| !! | CTTTTTAAAAGGTCTAGCTT+TGG | + | chr6_1:28861431-28861450 | Msa0881580:intron | 30.0% |
| ! | CATGATGTTTTCCCAAATTT+TGG | + | chr6_1:28861524-28861543 | Msa0881580:intron | 30.0% |
| !!! | AAAGAGCATTTTAGTTTGCA+AGG | - | chr6_1:28862089-28862108 | None:intergenic | 30.0% |
| CTAATCATGGTGGTAATATT+TGG | + | chr6_1:28862164-28862183 | Msa0881580:intron | 30.0% | |
| AATCATGGTGGTAATATTTG+GGG | + | chr6_1:28862166-28862185 | Msa0881580:intron | 30.0% | |
| !! | TAACCTTAACCCATTTTTGT+AGG | + | chr6_1:28862233-28862252 | Msa0881580:intron | 30.0% |
| !! | TAACCTACAAAAATGGGTTA+AGG | - | chr6_1:28862239-28862258 | None:intergenic | 30.0% |
| AATATCACTACTTTGCATAG+TGG | + | chr6_1:28862433-28862452 | Msa0881580:intron | 30.0% | |
| TTTCTTGCAACAAATACACT+AGG | - | chr6_1:28862591-28862610 | None:intergenic | 30.0% | |
| TGATGCAAACAATGAAAATG+GGG | - | chr6_1:28862718-28862737 | None:intergenic | 30.0% | |
| CTTGATGCAAACAATGAAAA+TGG | - | chr6_1:28862720-28862739 | None:intergenic | 30.0% | |
| TTCATTGTTTGCATCAAGTA+AGG | + | chr6_1:28862722-28862741 | Msa0881580:intron | 30.0% | |
| TCATTGTTTGCATCAAGTAA+GGG | + | chr6_1:28862723-28862742 | Msa0881580:intron | 30.0% | |
| TCCATTATTAGAAGAATTGG+AGG | + | chr6_1:28862913-28862932 | Msa0881580:intron | 30.0% | |
| TCCTCCAATTCTTCTAATAA+TGG | - | chr6_1:28862917-28862936 | None:intergenic | 30.0% | |
| ATTATTAGAAGAATTGGAGG+AGG | + | chr6_1:28862916-28862935 | Msa0881580:intron | 30.0% | |
| !! | ACCTTGGTTTGGAATATTAT+TGG | + | chr6_1:28863082-28863101 | Msa0881580:intron | 30.0% |
| ACCAATAATATTCCAAACCA+AGG | - | chr6_1:28863086-28863105 | None:intergenic | 30.0% | |
| ! | ATACGTTCTAAATTATGGTG+TGG | + | chr6_1:28863241-28863260 | Msa0881580:intron | 30.0% |
| ! | GACATGAAATTTTTCTGACA+AGG | - | chr6_1:28863278-28863297 | None:intergenic | 30.0% |
| TCATGTCGGCAAAAAATATA+TGG | + | chr6_1:28863291-28863310 | Msa0881580:intron | 30.0% | |
| CATTTCATTATCACTTCATC+AGG | + | chr6_1:28863329-28863348 | Msa0881580:intron | 30.0% | |
| AGGTAAGATATTAAGCTTGT+TGG | + | chr6_1:28863388-28863407 | Msa0881580:intron | 30.0% | |
| ! | GGTAAGATATTAAGCTTGTT+GGG | + | chr6_1:28863389-28863408 | Msa0881580:intron | 30.0% |
| GCAAATCAATATGTGTTTGA+AGG | - | chr6_1:28863452-28863471 | None:intergenic | 30.0% | |
| TTATGGCTGTAGAACAAAAA+GGG | + | chr6_1:28863493-28863512 | Msa0881580:intron | 30.0% | |
| CAATATCAAACTGACACAAA+GGG | - | chr6_1:28863651-28863670 | None:intergenic | 30.0% | |
| ACAATATCAAACTGACACAA+AGG | - | chr6_1:28863652-28863671 | None:intergenic | 30.0% | |
| ATCAATCAGTATTCATTTGG+AGG | - | chr6_1:28863724-28863743 | None:intergenic | 30.0% | |
| CTATGTATCAATCAGTACTA+GGG | - | chr6_1:28863753-28863772 | None:intergenic | 30.0% | |
| AAGTTGTATTGCCTTTACAA+TGG | + | chr6_1:28863785-28863804 | Msa0881580:three_prime_UTR | 30.0% | |
| AGTTGTATTGCCTTTACAAT+GGG | + | chr6_1:28863786-28863805 | Msa0881580:three_prime_UTR | 30.0% | |
| ! | TAAATCATCTTCGATGATGG+TGG | - | chr6_1:28858320-28858339 | None:intergenic | 35.0% |
| !!! | CGCGTTTTTTTTTTGTTGAC+AGG | + | chr6_1:28858565-28858584 | Msa0881580:intron | 35.0% |
| AGTGAAAAAGCAGTACAGAA+AGG | + | chr6_1:28858656-28858675 | Msa0881580:intron | 35.0% | |
| !! | TGTAGCACTGAAACTTTTGA+TGG | + | chr6_1:28858718-28858737 | Msa0881580:intron | 35.0% |
| AGCACCTTTCGTATAAAAGA+TGG | + | chr6_1:28858894-28858913 | Msa0881580:intron | 35.0% | |
| AAAAATTCTAGGTCTTCCTC+TGG | - | chr6_1:28859016-28859035 | None:intergenic | 35.0% | |
| GGAGCTACGTATTAATAAGT+TGG | + | chr6_1:28859056-28859075 | Msa0881580:intron | 35.0% | |
| ! | AAAGCTTTATCCCACTAAGT+GGG | - | chr6_1:28859137-28859156 | None:intergenic | 35.0% |
| !! | TAAAGCATTGACACAAACAC+CGG | - | chr6_1:28859190-28859209 | None:intergenic | 35.0% |
| TGTGGATGTTTACATTTGTC+AGG | - | chr6_1:28859299-28859318 | None:intergenic | 35.0% | |
| TGACAAATGTAAACATCCAC+AGG | + | chr6_1:28859298-28859317 | Msa0881580:intron | 35.0% | |
| AACCTGAAACTTACTACTGT+AGG | + | chr6_1:28859499-28859518 | Msa0881580:intron | 35.0% | |
| ATCCTACAGTAGTAAGTTTC+AGG | - | chr6_1:28859504-28859523 | None:intergenic | 35.0% | |
| TTTACAACTAAAGCGAGGAT+TGG | + | chr6_1:28859600-28859619 | Msa0881580:intron | 35.0% | |
| TTACAACTAAAGCGAGGATT+GGG | + | chr6_1:28859601-28859620 | Msa0881580:intron | 35.0% | |
| ! | ACAGGAAAATTTGGTAGCTT+GGG | + | chr6_1:28859660-28859679 | Msa0881580:intron | 35.0% |
| AACTATGAGATGGAAATGTG+AGG | - | chr6_1:28859758-28859777 | None:intergenic | 35.0% | |
| CTTCATACCGTCATCTTTAT+TGG | + | chr6_1:28859824-28859843 | Msa0881580:intron | 35.0% | |
| CTGAAGTCCAATAAAGATGA+CGG | - | chr6_1:28859834-28859853 | None:intergenic | 35.0% | |
| TGACCAATACACTGATATGT+TGG | + | chr6_1:28859856-28859875 | Msa0881580:intron | 35.0% | |
| AGCCAAGTTAATTCAGCAAA+AGG | + | chr6_1:28860286-28860305 | Msa0881580:CDS | 35.0% | |
| TAAGGGTTGCATTCATATCA+TGG | + | chr6_1:28860376-28860395 | Msa0881580:intron | 35.0% | |
| !! | AGTTTTGTGACTTGATCTTG+AGG | + | chr6_1:28860537-28860556 | Msa0881580:intron | 35.0% |
| ! | GACCCGAATTAAAAGGTTTT+AGG | - | chr6_1:28860660-28860679 | None:intergenic | 35.0% |
| AGGGGTGGGATAAAAAAATA+GGG | - | chr6_1:28860711-28860730 | None:intergenic | 35.0% | |
| GATAAGAAAAAAACAGGGGT+GGG | - | chr6_1:28860725-28860744 | None:intergenic | 35.0% | |
| AGATAAGAAAAAAACAGGGG+TGG | - | chr6_1:28860726-28860745 | None:intergenic | 35.0% | |
| GAAATGTCTGTGTAGAAACA+AGG | + | chr6_1:28860759-28860778 | Msa0881580:intron | 35.0% | |
| GAGAAAGAAACATCTGAAGA+AGG | + | chr6_1:28860847-28860866 | Msa0881580:CDS | 35.0% | |
| ! | AATGAAGTCCTTAGTTGATG+AGG | + | chr6_1:28860883-28860902 | Msa0881580:CDS | 35.0% |
| !!! | TAGTTTTGTTAGGGTTCTCT+TGG | + | chr6_1:28860912-28860931 | Msa0881580:intron | 35.0% |
| AAATATACTCACACGAGAAG+GGG | - | chr6_1:28860965-28860984 | None:intergenic | 35.0% | |
| GAAATATACTCACACGAGAA+GGG | - | chr6_1:28860966-28860985 | None:intergenic | 35.0% | |
| TGAAATATACTCACACGAGA+AGG | - | chr6_1:28860967-28860986 | None:intergenic | 35.0% | |
| TGTGTGTAATTAGACCACAA+GGG | - | chr6_1:28861018-28861037 | None:intergenic | 35.0% | |
| TTGTGTGTAATTAGACCACA+AGG | - | chr6_1:28861019-28861038 | None:intergenic | 35.0% | |
| GGAGAAGAAAAATGCAAATG+AGG | + | chr6_1:28861236-28861255 | Msa0881580:CDS | 35.0% | |
| TTAATGTGTGAATGAGTGCA+TGG | - | chr6_1:28861283-28861302 | None:intergenic | 35.0% | |
| TTAAGTGTGTCTGAACCAAT+TGG | + | chr6_1:28861347-28861366 | Msa0881580:intron | 35.0% | |
| ACTAGGCATTCCTAAAATGT+CGG | + | chr6_1:28861398-28861417 | Msa0881580:intron | 35.0% | |
| TTCCTAAAATGTCGGTGATT+AGG | + | chr6_1:28861406-28861425 | Msa0881580:intron | 35.0% | |
| !! | TGTTTTCCCAAATTTTGGCA+TGG | + | chr6_1:28861529-28861548 | Msa0881580:intron | 35.0% |
| TCTCGTGTACATAATTTCTC+AGG | - | chr6_1:28861620-28861639 | None:intergenic | 35.0% | |
| TATTATGTAGATATCCGAGG+AGG | + | chr6_1:28861675-28861694 | Msa0881580:intron | 35.0% | |
| AGGCAGATTAAAAAAGGATG+AGG | + | chr6_1:28861699-28861718 | Msa0881580:CDS | 35.0% | |
| CAGATTAAAAAAGGATGAGG+AGG | + | chr6_1:28861702-28861721 | Msa0881580:CDS | 35.0% | |
| AGGAGGAACAGAAAGAAATA+TGG | + | chr6_1:28861719-28861738 | Msa0881580:CDS | 35.0% | |
| !! | CTGTGAAGTGTTCTAGAATA+CGG | + | chr6_1:28861915-28861934 | Msa0881580:intron | 35.0% |
| CTTAGAATTGAAATCAGCCT+TGG | - | chr6_1:28862122-28862141 | None:intergenic | 35.0% | |
| GGAATCATAGGTACTAATCA+TGG | + | chr6_1:28862151-28862170 | Msa0881580:intron | 35.0% | |
| ATCATAGGTACTAATCATGG+TGG | + | chr6_1:28862154-28862173 | Msa0881580:intron | 35.0% | |
| ATCATGGTGGTAATATTTGG+GGG | + | chr6_1:28862167-28862186 | Msa0881580:intron | 35.0% | |
| !!! | GATACCTTTTTTCAGGCAAT+TGG | - | chr6_1:28862491-28862510 | None:intergenic | 35.0% |
| AAAAGTTCATTCACGCTTCA+TGG | - | chr6_1:28862762-28862781 | None:intergenic | 35.0% | |
| ATCATTCTTGGTGGAGATTA+AGG | - | chr6_1:28862811-28862830 | None:intergenic | 35.0% | |
| TTGTCAAATGCCAACATTTG+GGG | - | chr6_1:28862857-28862876 | None:intergenic | 35.0% | |
| CTTGTCAAATGCCAACATTT+GGG | - | chr6_1:28862858-28862877 | None:intergenic | 35.0% | |
| !! | TGAGACTAGTTTGTAAACCT+TGG | + | chr6_1:28863066-28863085 | Msa0881580:intron | 35.0% |
| ! | CTAGTTTGTAAACCTTGGTT+TGG | + | chr6_1:28863071-28863090 | Msa0881580:intron | 35.0% |
| ! | AGCTGGAGAGATTTTATGAA+GGG | + | chr6_1:28863357-28863376 | Msa0881580:CDS | 35.0% |
| ! | TTTTATGAAGGGTGGAAAGA+AGG | + | chr6_1:28863368-28863387 | Msa0881580:CDS | 35.0% |
| GTTATGGCTGTAGAACAAAA+AGG | + | chr6_1:28863492-28863511 | Msa0881580:intron | 35.0% | |
| ! | TAAAAAAAGGCTAGGGTGTT+TGG | + | chr6_1:28863578-28863597 | Msa0881580:exon | 35.0% |
| CCTATGTATCAATCAGTACT+AGG | - | chr6_1:28863754-28863773 | None:intergenic | 35.0% | |
| !! | CCTAGTACTGATTGATACAT+AGG | + | chr6_1:28863751-28863770 | Msa0881580:three_prime_UTR | 35.0% |
| !! | AGTACTGATTGATACATAGG+AGG | + | chr6_1:28863754-28863773 | Msa0881580:three_prime_UTR | 35.0% |
| TCAGTGTCTAACCTAAAATC+TGG | - | chr6_1:28863866-28863885 | None:intergenic | 35.0% | |
| !!! | GATTTTAGGTTAGACACTGA+TGG | + | chr6_1:28863866-28863885 | Msa0881580:three_prime_UTR | 35.0% |
| ! | CCTGGGTATTTTACATTAAG+CGG | - | chr6_1:28863922-28863941 | None:intergenic | 35.0% |
| ATCATGCATATAGGTTACCT+GGG | - | chr6_1:28863939-28863958 | None:intergenic | 35.0% | |
| AATCATGCATATAGGTTACC+TGG | - | chr6_1:28863940-28863959 | None:intergenic | 35.0% | |
| CTGTAATGACTGTCGTTCAA+AGG | + | chr6_1:28858190-28858209 | Msa0881580:five_prime_UTR | 40.0% | |
| AAAGAGACAATGAAGTCCTC+AGG | + | chr6_1:28858377-28858396 | Msa0881580:CDS | 40.0% | |
| GCGAAAAACAAAGATACCTG+AGG | - | chr6_1:28858396-28858415 | None:intergenic | 40.0% | |
| ! | GCACTGAAACTTTTGATGGA+AGG | + | chr6_1:28858722-28858741 | Msa0881580:intron | 40.0% |
| ACGTTAACACCGCTACAAAT+TGG | - | chr6_1:28858804-28858823 | None:intergenic | 40.0% | |
| ! | TTGTAGCGGTGTTAACGTAT+TGG | + | chr6_1:28858806-28858825 | Msa0881580:intron | 40.0% |
| ATGGTAGAAACAAGGTTGAG+TGG | + | chr6_1:28858913-28858932 | Msa0881580:intron | 40.0% | |
| AGAAACAAGGTTGAGTGGTT+TGG | + | chr6_1:28858918-28858937 | Msa0881580:intron | 40.0% | |
| ATATAGCTGACCCACTTAGT+GGG | + | chr6_1:28859124-28859143 | Msa0881580:intron | 40.0% | |
| ! | CAAAGCTTTATCCCACTAAG+TGG | - | chr6_1:28859138-28859157 | None:intergenic | 40.0% |
| ATGTAAACATCCACAGGCAA+AGG | + | chr6_1:28859304-28859323 | Msa0881580:intron | 40.0% | |
| ! | GCACGTATTTTCTCACTGTT+GGG | - | chr6_1:28859552-28859571 | None:intergenic | 40.0% |
| ! | TGCACGTATTTTCTCACTGT+TGG | - | chr6_1:28859553-28859572 | None:intergenic | 40.0% |
| TACAACTAAAGCGAGGATTG+GGG | + | chr6_1:28859602-28859621 | Msa0881580:intron | 40.0% | |
| ! | GACAGGAAAATTTGGTAGCT+TGG | + | chr6_1:28859659-28859678 | Msa0881580:intron | 40.0% |
| ! | AAAATTTGGTAGCTTGGGAG+AGG | + | chr6_1:28859665-28859684 | Msa0881580:intron | 40.0% |
| GAGAGGTTTCTTCTTTCTTC+CGG | + | chr6_1:28859682-28859701 | Msa0881580:intron | 40.0% | |
| AGAGGTTTCTTCTTTCTTCC+GGG | + | chr6_1:28859683-28859702 | Msa0881580:intron | 40.0% | |
| GTTATCTTCCACTATTGACC+CGG | - | chr6_1:28859704-28859723 | None:intergenic | 40.0% | |
| TGATGTTTGTCTCTCATCTG+AGG | + | chr6_1:28860511-28860530 | Msa0881580:intron | 40.0% | |
| GGGTGTATACAGAACTGTAA+GGG | - | chr6_1:28860598-28860617 | None:intergenic | 40.0% | |
| AGGGTGTATACAGAACTGTA+AGG | - | chr6_1:28860599-28860618 | None:intergenic | 40.0% | |
| GGGTGGGATAAAAAAATAGG+GGG | - | chr6_1:28860709-28860728 | None:intergenic | 40.0% | |
| GGGGTGGGATAAAAAAATAG+GGG | - | chr6_1:28860710-28860729 | None:intergenic | 40.0% | |
| CAGGGGTGGGATAAAAAAAT+AGG | - | chr6_1:28860712-28860731 | None:intergenic | 40.0% | |
| AATATACTCACACGAGAAGG+GGG | - | chr6_1:28860964-28860983 | None:intergenic | 40.0% | |
| GTGGTCTAATTACACACAAG+AGG | + | chr6_1:28861020-28861039 | Msa0881580:intron | 40.0% | |
| GTCTAATTACACACAAGAGG+TGG | + | chr6_1:28861023-28861042 | Msa0881580:intron | 40.0% | |
| ATGTCGTAGACTCATCCAAT+TGG | - | chr6_1:28861365-28861384 | None:intergenic | 40.0% | |
| ! | CACCTAATCACCGACATTTT+AGG | - | chr6_1:28861411-28861430 | None:intergenic | 40.0% |
| CTGATGCCATGCCAAAATTT+GGG | - | chr6_1:28861538-28861557 | None:intergenic | 40.0% | |
| TCTGATGCCATGCCAAAATT+TGG | - | chr6_1:28861539-28861558 | None:intergenic | 40.0% | |
| ! | TTTTAATCTGCCTTCCTCCT+CGG | - | chr6_1:28861692-28861711 | None:intergenic | 40.0% |
| GGAGGAAGGCAGATTAAAAA+AGG | + | chr6_1:28861693-28861712 | Msa0881580:CDS | 40.0% | |
| ! | AAGAAAGCGTGAACATGAAG+AGG | + | chr6_1:28861744-28861763 | Msa0881580:CDS | 40.0% |
| GGAAGGAACAAGAGAAAAGA+GGG | + | chr6_1:28861771-28861790 | Msa0881580:CDS | 40.0% | |
| CAAACTGCAAGCTGTGTTTA+TGG | + | chr6_1:28861833-28861852 | Msa0881580:intron | 40.0% | |
| GGACTCTAGTGAGACTAATA+TGG | - | chr6_1:28862068-28862087 | None:intergenic | 40.0% | |
| GCTCTTTGTACAATTTGCCA+AGG | + | chr6_1:28862102-28862121 | Msa0881580:intron | 40.0% | |
| TGGTAATATTTGGGGGACTT+TGG | + | chr6_1:28862174-28862193 | Msa0881580:intron | 40.0% | |
| TCATGTAGGCTTGTGATAGA+TGG | - | chr6_1:28862373-28862392 | None:intergenic | 40.0% | |
| ACGACCAATTGCCTGAAAAA+AGG | + | chr6_1:28862484-28862503 | Msa0881580:intron | 40.0% | |
| TTACACTTCCTCTCACATGA+AGG | + | chr6_1:28862526-28862545 | Msa0881580:intron | 40.0% | |
| CCTAGGAATGCTTTACAGTT+GGG | - | chr6_1:28862682-28862701 | None:intergenic | 40.0% | |
| TCCTAGGAATGCTTTACAGT+TGG | - | chr6_1:28862683-28862702 | None:intergenic | 40.0% | |
| !! | GGGGAAGTTATTTTCTTCCT+AGG | - | chr6_1:28862699-28862718 | None:intergenic | 40.0% |
| CCTTGTCAAATGCCAACATT+TGG | - | chr6_1:28862859-28862878 | None:intergenic | 40.0% | |
| CCAAATGTTGGCATTTGACA+AGG | + | chr6_1:28862856-28862875 | Msa0881580:intron | 40.0% | |
| ACAACTAAGAGCTCCTTAGA+TGG | - | chr6_1:28862950-28862969 | None:intergenic | 40.0% | |
| CTTCATAAAATCTCTCCAGC+TGG | - | chr6_1:28863358-28863377 | None:intergenic | 40.0% | |
| ! | CAGCTGGAGAGATTTTATGA+AGG | + | chr6_1:28863356-28863375 | Msa0881580:CDS | 40.0% |
| ! | TGGAGAGATTTTATGAAGGG+TGG | + | chr6_1:28863360-28863379 | Msa0881580:CDS | 40.0% |
| ATGCGTCAAGTAGTAGTAGT+TGG | - | chr6_1:28863422-28863441 | None:intergenic | 40.0% | |
| ATCTTCTGTCTTGAGCTTAG+GGG | - | chr6_1:28863530-28863549 | None:intergenic | 40.0% | |
| GATCTTCTGTCTTGAGCTTA+GGG | - | chr6_1:28863531-28863550 | None:intergenic | 40.0% | |
| ! | CTCTGAACGTAGGATTTGTT+AGG | - | chr6_1:28863553-28863572 | None:intergenic | 40.0% |
| CTAACAAATCCTACGTTCAG+AGG | + | chr6_1:28863551-28863570 | Msa0881580:CDS | 40.0% | |
| GTTCAGAGGCCTGTAAAAAA+AGG | + | chr6_1:28863565-28863584 | Msa0881580:CDS | 40.0% | |
| AGGCCTGTAAAAAAAGGCTA+GGG | + | chr6_1:28863571-28863590 | Msa0881580:CDS | 40.0% | |
| !!! | ACACCCTAGCCTTTTTTTAC+AGG | - | chr6_1:28863577-28863596 | None:intergenic | 40.0% |
| !! | TTTATCTCTAGGGTCATGAG+AGG | + | chr6_1:28863679-28863698 | Msa0881580:three_prime_UTR | 40.0% |
| CCGCTTAATGTAAAATACCC+AGG | + | chr6_1:28863919-28863938 | Msa0881580:three_prime_UTR | 40.0% | |
| !! | CATCTTCGATGATGGTGGAT+GGG | - | chr6_1:28858315-28858334 | None:intergenic | 45.0% |
| !! | TCATCTTCGATGATGGTGGA+TGG | - | chr6_1:28858316-28858335 | None:intergenic | 45.0% |
| !! | AACGTATTGGTGTCGATGAG+TGG | + | chr6_1:28858819-28858838 | Msa0881580:intron | 45.0% |
| ! | GTGGTTTGGACATAGAGAGA+AGG | + | chr6_1:28858932-28858951 | Msa0881580:intron | 45.0% |
| CTCCTGACTACAAAATCTCC+AGG | - | chr6_1:28858958-28858977 | None:intergenic | 45.0% | |
| TGCAGAGTAGTCAACTAGCT+AGG | + | chr6_1:28858989-28859008 | Msa0881580:intron | 45.0% | |
| GCAGAGTAGTCAACTAGCTA+GGG | + | chr6_1:28858990-28859009 | Msa0881580:intron | 45.0% | |
| CACTAAGTGGGTCAGCTATA+TGG | - | chr6_1:28859125-28859144 | None:intergenic | 45.0% | |
| CATATAGCTGACCCACTTAG+TGG | + | chr6_1:28859123-28859142 | Msa0881580:intron | 45.0% | |
| TAAACATCCACAGGCAAAGG+AGG | + | chr6_1:28859307-28859326 | Msa0881580:intron | 45.0% | |
| TCTTTCTTCCGGGTCAATAG+TGG | + | chr6_1:28859693-28859712 | Msa0881580:intron | 45.0% | |
| !! | ACTGCAATCTCAAGAGTGTC+AGG | + | chr6_1:28859981-28860000 | Msa0881580:intron | 45.0% |
| ! | CTACAGTGATTTGCAACACC+TGG | + | chr6_1:28860417-28860436 | Msa0881580:intron | 45.0% |
| TAAGGGTAAGTGCATAGACG+TGG | - | chr6_1:28860581-28860600 | None:intergenic | 45.0% | |
| ACAGTTCTGTATACACCCTG+TGG | + | chr6_1:28860600-28860619 | Msa0881580:intron | 45.0% | |
| CAGTTCTGTATACACCCTGT+GGG | + | chr6_1:28860601-28860620 | Msa0881580:intron | 45.0% | |
| AGTTCTGTATACACCCTGTG+GGG | + | chr6_1:28860602-28860621 | Msa0881580:intron | 45.0% | |
| CATTGATGAACTACCCCACA+GGG | - | chr6_1:28860618-28860637 | None:intergenic | 45.0% | |
| ACATTGATGAACTACCCCAC+AGG | - | chr6_1:28860619-28860638 | None:intergenic | 45.0% | |
| GTGTAATTAGACCACAAGGG+TGG | - | chr6_1:28861015-28861034 | None:intergenic | 45.0% | |
| ACAGTCGGAAGAATTCAAGC+AGG | + | chr6_1:28861168-28861187 | Msa0881580:CDS | 45.0% | |
| !! | CATGGCATCAGAAAGTGCTA+GGG | + | chr6_1:28861547-28861566 | Msa0881580:intron | 45.0% |
| ATGTAGATATCCGAGGAGGA+AGG | + | chr6_1:28861679-28861698 | Msa0881580:intron | 45.0% | |
| AGCGTGAACATGAAGAGGAA+TGG | + | chr6_1:28861749-28861768 | Msa0881580:CDS | 45.0% | |
| GCGTGAACATGAAGAGGAAT+GGG | + | chr6_1:28861750-28861769 | Msa0881580:CDS | 45.0% | |
| GAACATGAAGAGGAATGGGA+AGG | + | chr6_1:28861754-28861773 | Msa0881580:CDS | 45.0% | |
| GGGAAGGAACAAGAGAAAAG+AGG | + | chr6_1:28861770-28861789 | Msa0881580:CDS | 45.0% | |
| !! | AGATGGTGGGTGTTGTTATC+TGG | + | chr6_1:28862341-28862360 | Msa0881580:intron | 45.0% |
| GCTAAATGCCTTCATGTGAG+AGG | - | chr6_1:28862537-28862556 | None:intergenic | 45.0% | |
| ! | CCCAACTGTAAAGCATTCCT+AGG | + | chr6_1:28862679-28862698 | Msa0881580:intron | 45.0% |
| ATACGGATGTCCCCAAATGT+TGG | + | chr6_1:28862844-28862863 | Msa0881580:intron | 45.0% | |
| TCTTCTGTCTTGAGCTTAGG+GGG | - | chr6_1:28863529-28863548 | None:intergenic | 45.0% | |
| GGATCTTCTGTCTTGAGCTT+AGG | - | chr6_1:28863532-28863551 | None:intergenic | 45.0% | |
| ! | TTTTACAGGCCTCTGAACGT+AGG | - | chr6_1:28863563-28863582 | None:intergenic | 45.0% |
| GAGGCCTGTAAAAAAAGGCT+AGG | + | chr6_1:28863570-28863589 | Msa0881580:CDS | 45.0% | |
| TCACAGGCAATCTATCCAAC+AGG | + | chr6_1:28863601-28863620 | Msa0881580:three_prime_UTR | 45.0% | |
| ! | AGGTTTTCTTGGACTCCTGT+TGG | - | chr6_1:28863619-28863638 | None:intergenic | 45.0% |
| ! | CTTGCAGTGAGCCAGATTTT+AGG | + | chr6_1:28863852-28863871 | Msa0881580:three_prime_UTR | 45.0% |
| !! | CTTTTGATGGAAGGCGTGTC+TGG | + | chr6_1:28858731-28858750 | Msa0881580:intron | 50.0% |
| TTGGACATAGAGAGAAGGCC+TGG | + | chr6_1:28858937-28858956 | Msa0881580:intron | 50.0% | |
| ! | GGCCTGGAGATTTTGTAGTC+AGG | + | chr6_1:28858953-28858972 | Msa0881580:intron | 50.0% |
| CGACGTGTCAATGTTGTGTC+CGG | + | chr6_1:28859168-28859187 | Msa0881580:intron | 50.0% | |
| !! | TCTCAAGAGTGTCAGGACGT+AGG | + | chr6_1:28859988-28860007 | Msa0881580:intron | 50.0% |
| !! | CGAGAAGGGGGAGTATTCTA+AGG | - | chr6_1:28860952-28860971 | None:intergenic | 50.0% |
| !! | GCATGGCATCAGAAAGTGCT+AGG | + | chr6_1:28861546-28861565 | Msa0881580:intron | 50.0% |
| GGAGGCAGTTTCACCATCTA+AGG | + | chr6_1:28862934-28862953 | Msa0881580:intron | 50.0% | |
| CACTTCATCAGGTATCCAGC+TGG | + | chr6_1:28863340-28863359 | Msa0881580:intron | 50.0% | |
| ! | AAACTGACACAAAGGGCGCA+TGG | - | chr6_1:28863644-28863663 | None:intergenic | 50.0% |
| ! | GGTCATGAGAGGCATGTCAT+TGG | + | chr6_1:28863690-28863709 | Msa0881580:three_prime_UTR | 50.0% |
| AGTCAACTAGCTAGGGCCAG+AGG | + | chr6_1:28858997-28859016 | Msa0881580:intron | 55.0% | |
| CCAAAAGCCTCCTTTGCCTG+TGG | - | chr6_1:28859317-28859336 | None:intergenic | 55.0% | |
| ! | CCACAGGCAAAGGAGGCTTT+TGG | + | chr6_1:28859314-28859333 | Msa0881580:intron | 55.0% |
| ! | CAGGCAAAGGAGGCTTTTGG+AGG | + | chr6_1:28859317-28859336 | Msa0881580:intron | 55.0% |
| CTAAAGCGAGGATTGGGGCA+TGG | + | chr6_1:28859607-28859626 | Msa0881580:intron | 55.0% | |
| TCTGTCTTGCACCACCCTTG+TGG | + | chr6_1:28861001-28861020 | Msa0881580:intron | 55.0% | |
| ! | AGGCTAGGGTGTTTGGTCAC+AGG | + | chr6_1:28863585-28863604 | Msa0881580:exon | 55.0% |
| ! | GGCGCATGGCTAGGTTTTCT+TGG | - | chr6_1:28863630-28863649 | None:intergenic | 55.0% |
| GCTCACTGCAAGCAGATGAC+TGG | - | chr6_1:28863844-28863863 | None:intergenic | 55.0% | |
| ! | GACACAAAGGGCGCATGGCT+AGG | - | chr6_1:28863639-28863658 | None:intergenic | 60.0% |
| AGGCGTGTCTGGTGTGCGAC+AGG | + | chr6_1:28858742-28858761 | Msa0881580:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 28858168 | 28863991 | 28858168 | ID=Msa0881580;Name=Msa0881580 |
| chr6_1 | mRNA | 28858168 | 28863991 | 28858168 | ID=Msa0881580-mRNA-1;Parent=Msa0881580;Name=Msa0881580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=130|0.85|0.87|1|0.71|0.87|8|400|202 |
| chr6_1 | exon | 28858168 | 28858398 | 28858168 | ID=Msa0881580-mRNA-1:exon:7349;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28858587 | 28858594 | 28858587 | ID=Msa0881580-mRNA-1:exon:7350;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28860230 | 28860307 | 28860230 | ID=Msa0881580-mRNA-1:exon:7351;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28860831 | 28860904 | 28860831 | ID=Msa0881580-mRNA-1:exon:7352;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28861145 | 28861258 | 28861145 | ID=Msa0881580-mRNA-1:exon:7353;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28861685 | 28861792 | 28861685 | ID=Msa0881580-mRNA-1:exon:7354;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28863351 | 28863389 | 28863351 | ID=Msa0881580-mRNA-1:exon:7355;Parent=Msa0881580-mRNA-1 |
| chr6_1 | exon | 28863505 | 28863991 | 28863505 | ID=Msa0881580-mRNA-1:exon:7356;Parent=Msa0881580-mRNA-1 |
| chr6_1 | five_prime_UTR | 28858168 | 28858297 | 28858168 | ID=Msa0881580-mRNA-1:five_prime_utr;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28858298 | 28858398 | 28858298 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28858587 | 28858594 | 28858587 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28860230 | 28860307 | 28860230 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28860831 | 28860904 | 28860831 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28861145 | 28861258 | 28861145 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28861685 | 28861792 | 28861685 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28863351 | 28863389 | 28863351 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | CDS | 28863505 | 28863591 | 28863505 | ID=Msa0881580-mRNA-1:cds;Parent=Msa0881580-mRNA-1 |
| chr6_1 | three_prime_UTR | 28863592 | 28863991 | 28863592 | ID=Msa0881580-mRNA-1:three_prime_utr;Parent=Msa0881580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
