AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1376200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376200 MtrunA17_Chr1g0212611 90.873 504 30 5 1 502 1 490 0.0 793
Msa1376200 MtrunA17_Chr4g0058151 28.161 174 113 6 222 387 123 292 1.67e-14 74.3
Msa1376200 MtrunA17_Chr4g0038111 25.500 200 129 6 206 389 325 520 2.78e-13 72.4
Msa1376200 MtrunA17_Chr3g0116631 29.213 178 109 6 222 387 110 282 2.06e-12 67.8
Msa1376200 MtrunA17_Chr7g0267571 25.137 183 124 5 218 387 106 288 8.22e-12 66.2
Msa1376200 MtrunA17_Chr1g0177101 26.630 184 121 7 222 394 109 289 2.61e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376200 AT3G55340.1 42.808 292 128 6 210 492 150 411 3.86e-69 232
Msa1376200 AT3G18610.2 26.178 191 128 5 210 391 314 500 4.53e-14 75.1
Msa1376200 AT3G18610.3 26.178 191 128 5 210 391 344 530 4.70e-14 75.1
Msa1376200 AT3G18610.1 26.178 191 128 5 210 391 374 560 5.84e-14 75.1
Msa1376200 AT1G60000.1 29.651 172 117 4 219 387 83 253 4.74e-13 69.7
Msa1376200 AT4G24770.1 28.655 171 116 5 222 387 151 320 6.18e-13 70.5
Msa1376200 AT4G24770.2 28.655 171 116 5 222 387 151 320 6.18e-13 70.5
Msa1376200 AT5G50250.1 28.070 171 117 5 222 387 114 283 1.89e-12 68.6
Msa1376200 AT1G01080.3 27.647 170 110 4 222 378 109 278 1.25e-11 65.9
Msa1376200 AT1G01080.1 27.326 172 112 4 222 380 109 280 3.44e-11 64.7
Msa1376200 AT2G16940.1 26.064 188 125 5 223 397 184 370 3.62e-11 65.9

Find 114 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATCCCTCCTTCATTTC+TGG 0.108973 tig0019789:+7431 None:intergenic
ATCATTCTCCTCTGCAATTT+TGG 0.128702 tig0019789:+9443 None:intergenic
CCTCACCTTAAAACTAATTA+TGG 0.226944 tig0019789:+7915 None:intergenic
ATTCAGCGTTAATCTGGTTT+AGG 0.239346 tig0019789:+9946 None:intergenic
GAAGCAGCTATTTGTGGGTT+TGG 0.284241 tig0019789:+6873 None:intergenic
TTCCTGACACTGGCAAGTTT+AGG 0.286520 tig0019789:-7945 Msa1376200:CDS
TCCTGACACTGGCAAGTTTA+GGG 0.287968 tig0019789:-7944 Msa1376200:CDS
AAGAAGAAGAAGAATGAAAA+TGG 0.309818 tig0019789:-9663 Msa1376200:CDS
TTCAGCGTTAATCTGGTTTA+GGG 0.321694 tig0019789:+9947 None:intergenic
AAGCAGCTATTTGTGGGTTT+GGG 0.330204 tig0019789:+6874 None:intergenic
CCTTCATTTCTGGAGTAAAT+CGG 0.343732 tig0019789:+7441 None:intergenic
TTTGGTTCCATCATCTTCAT+TGG 0.353266 tig0019789:+9803 None:intergenic
GATTAGATTCAGCGTTAATC+TGG 0.363787 tig0019789:+9940 None:intergenic
ATGAAAATGGTGTGGCTAAT+GGG 0.368284 tig0019789:-9650 Msa1376200:CDS
TGCTACGGGTGTCGTCAAAA+AGG 0.378482 tig0019789:-6915 Msa1376200:CDS
GCAGGTTCCAAACCAGTTGC+AGG 0.384369 tig0019789:-7161 Msa1376200:CDS
CTTTATATCAAAGACTGAAA+AGG 0.385355 tig0019789:+6697 None:intergenic
TGTTCATGCAGTCAAGAAAA+TGG 0.388079 tig0019789:-8081 Msa1376200:intron
TTTAGAACCTGCAACTGGTT+TGG 0.388692 tig0019789:+7154 None:intergenic
GTTGCAAAGGTCGAAGCTTT+CGG 0.389760 tig0019789:+9835 None:intergenic
TTTCCACTTGCAACAGAACT+TGG 0.391674 tig0019789:+6954 None:intergenic
AACAAAACTGCAGAGGAAAA+TGG 0.393203 tig0019789:-9471 Msa1376200:CDS
TAATGGGGTTGTTGTTGTTA+AGG 0.395655 tig0019789:-9562 Msa1376200:CDS
GTCATCCTCACTTGAATAGT+AGG 0.395730 tig0019789:+8023 None:intergenic
ACACAATCAAGCCGTCTTCA+TGG 0.402597 tig0019789:+6791 None:intergenic
AATGAAAATGGTGTGGCTAA+TGG 0.404188 tig0019789:-9651 Msa1376200:CDS
ATCAAGAGCCAATGCTCGTT+TGG 0.407420 tig0019789:+7606 None:intergenic
CCCCTAAACTTGCCAGTGTC+AGG 0.419850 tig0019789:+7943 None:intergenic
AGTGATGATGATGTGGCTAA+TGG 0.422711 tig0019789:-9615 Msa1376200:CDS
ACTGGTTTGGAACCTGCAAC+TGG 0.424778 tig0019789:+7167 None:intergenic
CTTAGACAAAATGGGTTTGT+TGG 0.429669 tig0019789:+9869 None:intergenic
AAACGAGCATTGGCTCTTGA+TGG 0.432294 tig0019789:-7604 Msa1376200:CDS
GAAATTGGAAATGAGGGTTT+CGG 0.434366 tig0019789:-9774 Msa1376200:CDS
TCTTGTTTGGAAGGCCTGTC+AGG 0.436677 tig0019789:-7220 Msa1376200:CDS
TTTATATCAAAGACTGAAAA+GGG 0.437811 tig0019789:+6698 None:intergenic
TTTATTGATTTATTCACAAA+TGG 0.438080 tig0019789:-6631 Msa1376200:three_prime_UTR
CTTCATTTCTGGAGTAAATC+GGG 0.442986 tig0019789:+7442 None:intergenic
TTGGACCAAAGTGTCTTGTT+TGG 0.444576 tig0019789:-7233 Msa1376200:CDS
AGATGAATCAATTGAAAAGA+AGG 0.446995 tig0019789:-9706 Msa1376200:CDS
GTACAACAAAATCAAAGCTT+TGG 0.454292 tig0019789:+6573 None:intergenic
AATGATGATAGTGTTGCTAA+TGG 0.456928 tig0019789:-9579 Msa1376200:CDS
AGAGAGTTTGAAGAAGAAGA+AGG 0.458401 tig0019789:+9915 None:intergenic
ATGATGATAGTGTTGCTAAT+GGG 0.460576 tig0019789:-9578 Msa1376200:CDS
CTTCTCAAATTGCAATGTAA+AGG 0.461827 tig0019789:-7351 Msa1376200:CDS
GTTGCTTGAGTTGCTTTACA+TGG 0.466789 tig0019789:+7464 None:intergenic
GTGATGATGATGTGGCTAAT+GGG 0.468531 tig0019789:-9614 Msa1376200:CDS
CCTGGTTTAGAACCTGCAAC+TGG 0.468577 tig0019789:+7149 None:intergenic
AATGCCACAATCTACGGTAT+TGG 0.479144 tig0019789:-9403 Msa1376200:CDS
CAGTAGAAGCAGCTATTTGT+GGG 0.480573 tig0019789:+6868 None:intergenic
CTTGGTATGGACAAGGAAAC+GGG 0.485470 tig0019789:-7320 Msa1376200:CDS
GCAGTTGAGCAACCAGGTGC+AGG 0.486239 tig0019789:-6999 Msa1376200:CDS
ACTTGGTATGGACAAGGAAA+CGG 0.498089 tig0019789:-7321 Msa1376200:CDS
ACCAAAGTGTCTTGTTTGGA+AGG 0.502106 tig0019789:-7229 Msa1376200:CDS
AGCAGCGGCCAAACGAGCAT+TGG 0.504558 tig0019789:-7614 Msa1376200:CDS
GCTACGAAAGTTTATGTTGG+AGG 0.506031 tig0019789:-8051 Msa1376200:CDS
AACGAGGAAATTGGAAATGA+GGG 0.508780 tig0019789:-9780 Msa1376200:CDS
ACTCAATCCAATGAAGATGA+TGG 0.516122 tig0019789:-9810 Msa1376200:CDS
CCGATTTACTCCAGAAATGA+AGG 0.517469 tig0019789:-7441 Msa1376200:CDS
AAACGAGGAAATTGGAAATG+AGG 0.518572 tig0019789:-9781 Msa1376200:CDS
TACTGCACTTTGAAGCATGC+AGG 0.519924 tig0019789:-6850 Msa1376200:exon
AGAGGAAATGCCACAATCTA+CGG 0.521392 tig0019789:-9409 Msa1376200:CDS
GCCTTCCAAACAAGACACTT+TGG 0.522248 tig0019789:+7228 None:intergenic
ATATCGTTCCGCCATGAAGA+CGG 0.522923 tig0019789:-6802 Msa1376200:three_prime_UTR
TTGGATTGAGTTTGTTGCAA+AGG 0.528061 tig0019789:+9822 None:intergenic
CTTGTCCATACCAAGTCGTA+TGG 0.528600 tig0019789:+7328 None:intergenic
AAAGGCCATACGACTTGGTA+TGG 0.529863 tig0019789:-7333 Msa1376200:CDS
GCAGTAGAAGCAGCTATTTG+TGG 0.531101 tig0019789:+6867 None:intergenic
CATGCAATTAATTTCAGTGA+TGG 0.534530 tig0019789:+7972 None:intergenic
GGATATAATAGAATATATGT+TGG 0.535480 tig0019789:-7416 Msa1376200:CDS
CCTGACACTGGCAAGTTTAG+GGG 0.542201 tig0019789:-7943 Msa1376200:CDS
GAGTTTGAAGAAGAAGAAGG+TGG 0.543166 tig0019789:+9918 None:intergenic
GTTGCTACGAAAGTTTATGT+TGG 0.543964 tig0019789:-8054 Msa1376200:CDS
AACAAAATCAAAGCTTTGGT+AGG 0.544766 tig0019789:+6577 None:intergenic
GAACTTGGTTGCTCAACAGT+TGG 0.545048 tig0019789:+6969 None:intergenic
ACTGAAGACAGCACTTGCAT+TGG 0.546883 tig0019789:-7252 Msa1376200:CDS
AGACAAAATGGGTTTGTTGG+TGG 0.554333 tig0019789:+9872 None:intergenic
GCAGGTTCTAAACCAGGTGC+AGG 0.555413 tig0019789:-7143 Msa1376200:CDS
CAACCAAGTTCTGTTGCAAG+TGG 0.556840 tig0019789:-6957 Msa1376200:CDS
ACCGCACAACTTATCCTGAC+AGG 0.558651 tig0019789:+7206 None:intergenic
AACTGCAGAGGAAAATGGTA+AGG 0.561255 tig0019789:-9466 Msa1376200:CDS
TCATCCTCACTTGAATAGTA+GGG 0.561329 tig0019789:+8024 None:intergenic
TCATTTGCAGTTGAGCAACC+AGG 0.564422 tig0019789:-7005 Msa1376200:CDS
AATGTAAAGGCCATACGACT+TGG 0.565382 tig0019789:-7338 Msa1376200:CDS
CTGACACTGGCAAGTTTAGG+GGG 0.568128 tig0019789:-7942 Msa1376200:CDS
TATATGTTGGAAGTCTGTCA+TGG 0.574488 tig0019789:-7403 Msa1376200:CDS
AAATAACAGAGGAAGAACTA+AGG 0.575629 tig0019789:-7379 Msa1376200:CDS
AAGGAAACGGGAGAATTTCG+AGG 0.577973 tig0019789:-7308 Msa1376200:CDS
CCAGTTGCAGGTTCTAAACC+AGG 0.578088 tig0019789:-7149 Msa1376200:CDS
AGGAAGAATAGAATGTGCTA+CGG 0.579726 tig0019789:-6930 Msa1376200:CDS
TGAAAATGGTGTGGCTAATG+GGG 0.585256 tig0019789:-9649 Msa1376200:CDS
TGATGATGATGTGGCTAATG+GGG 0.585907 tig0019789:-9613 Msa1376200:CDS
GTTCTGTTGCAAGTGGAAAG+AGG 0.588009 tig0019789:-6950 Msa1376200:CDS
AAAGAAGAACAAAACTGCAG+AGG 0.588575 tig0019789:-9478 Msa1376200:CDS
CTAACACTACTACCACTACA+AGG 0.592037 tig0019789:-9380 Msa1376200:intron
TGATGATAGTGTTGCTAATG+GGG 0.592050 tig0019789:-9577 Msa1376200:CDS
ATATGTTGGAAGTCTGTCAT+GGG 0.601270 tig0019789:-7402 Msa1376200:CDS
GGAAGAATAGAATGTGCTAC+GGG 0.605374 tig0019789:-6929 Msa1376200:CDS
GAAGAAGAATGAAAATGGTG+TGG 0.615435 tig0019789:-9658 Msa1376200:CDS
AAATAGGACAGTATCTGTAG+TGG 0.615605 tig0019789:-6750 Msa1376200:three_prime_UTR
GTTGAGCAACCAGGTGCAGG+AGG 0.622181 tig0019789:-6996 Msa1376200:CDS
ATAGATAAATCACCTTGTAG+TGG 0.629770 tig0019789:+9368 None:intergenic
GAATGATTCTAATCATCAAG+AGG 0.630329 tig0019789:-9427 Msa1376200:CDS
TTAGCCAATACCGTAGATTG+TGG 0.631628 tig0019789:+9399 None:intergenic
CATACGACTTGGTATGGACA+AGG 0.655913 tig0019789:-7327 Msa1376200:CDS
TTTACTCCAGAAATGAAGGA+GGG 0.658643 tig0019789:-7437 Msa1376200:CDS
GCCTGTCAGGATAAGTTGTG+CGG 0.659328 tig0019789:-7207 Msa1376200:CDS
ATTTACTCCAGAAATGAAGG+AGG 0.660456 tig0019789:-7438 Msa1376200:CDS
GAAGAAGAGTGATGATGATG+TGG 0.667326 tig0019789:-9622 Msa1376200:CDS
TGGTAAGGCCAAAATTGCAG+AGG 0.668394 tig0019789:-9451 Msa1376200:CDS
AGGAAACGGGAGAATTTCGA+GGG 0.671275 tig0019789:-7307 Msa1376200:CDS
AATTCCCTACTATTCAAGTG+AGG 0.689712 tig0019789:-8028 Msa1376200:CDS
TCTGTCATGGGAAATAACAG+AGG 0.691463 tig0019789:-7390 Msa1376200:CDS
CTTCCTGCAGACTGAAGCAG+CGG 0.704303 tig0019789:-7629 Msa1376200:intron
CAATCAAGCCGTCTTCATGG+CGG 0.743839 tig0019789:+6794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTGAAAAAAACAAAAT+AGG - tig0019789:9809-9828 Msa1376200:CDS 10.0%
!!! TTTTTTTTTCTTACTTATGA+AGG - tig0019789:7239-7258 Msa1376200:CDS 15.0%
!!! ATTTTTATTTAATGTGTGTT+TGG - tig0019789:7322-7341 Msa1376200:CDS 15.0%
!!! ATTGATTTTGAATGAATTTA+TGG - tig0019789:7361-7380 Msa1376200:CDS 15.0%
!! ATCAATATTAAGTATATGTT+TGG + tig0019789:7523-7542 None:intergenic 15.0%
!! AGATAATCAATTAAAAAACT+GGG + tig0019789:8465-8484 None:intergenic 15.0%
!! TAAAACATTTAATGTTAACA+GGG - tig0019789:9065-9084 Msa1376200:intron 15.0%
!!! TTTATTGATTTATTCACAAA+TGG - tig0019789:9944-9963 Msa1376200:CDS 15.0%
!! CTATTAATTCACATAAAAAT+TGG + tig0019789:9972-9991 None:intergenic 15.0%
!! TGCAAAAAAATCAATGAAAA+AGG - tig0019789:7037-7056 Msa1376200:CDS 20.0%
!!! AATCAATGATACTTTAAAAG+TGG - tig0019789:7495-7514 Msa1376200:intron 20.0%
!!! TTAATATTGATTTTGTGTGA+AGG - tig0019789:7532-7551 Msa1376200:intron 20.0%
!! CAATAATAGAATGATAAATG+AGG - tig0019789:7622-7641 Msa1376200:CDS 20.0%
!! AATTACTCTTTCAAAAAATG+TGG - tig0019789:8138-8157 Msa1376200:intron 20.0%
!!! GTTTCAATTAAAGTTTTTCT+AGG + tig0019789:8296-8315 None:intergenic 20.0%
!! TGATATATGATAGAACATTA+TGG - tig0019789:8361-8380 Msa1376200:intron 20.0%
!! ACAATAATAACAACAATCAA+GGG + tig0019789:8410-8429 None:intergenic 20.0%
!! AACAATAATAACAACAATCA+AGG + tig0019789:8411-8430 None:intergenic 20.0%
!! CAGATAATCAATTAAAAAAC+TGG + tig0019789:8466-8485 None:intergenic 20.0%
!!! CATTTTTAGCTTTATTTTGT+TGG - tig0019789:8694-8713 Msa1376200:intron 20.0%
!! GTAAAACATTTAATGTTAAC+AGG - tig0019789:9064-9083 Msa1376200:intron 20.0%
!! AAAACATTTAATGTTAACAG+GGG - tig0019789:9066-9085 Msa1376200:intron 20.0%
!! GGATATAATAGAATATATGT+TGG - tig0019789:9159-9178 Msa1376200:intron 20.0%
!! GAAAAAAAATGACAACAATA+TGG + tig0019789:9858-9877 None:intergenic 20.0%
!! TTTATATCAAAGACTGAAAA+GGG + tig0019789:9880-9899 None:intergenic 20.0%
!! TATAAAGCAAGAAAAAATGT+AGG - tig0019789:9894-9913 Msa1376200:CDS 20.0%
!! ATAAAGCAAGAAAAAATGTA+GGG - tig0019789:9895-9914 Msa1376200:CDS 20.0%
! AGATGAATCAATTGAAAAGA+AGG - tig0019789:6869-6888 Msa1376200:CDS 25.0%
! AAGAAGAAGAAGAATGAAAA+TGG - tig0019789:6912-6931 Msa1376200:CDS 25.0%
! AAATGTCTCAAACAATGTAA+TGG - tig0019789:7295-7314 Msa1376200:CDS 25.0%
! TGACTAAAATTCAATTGTAG+AGG - tig0019789:7425-7444 Msa1376200:CDS 25.0%
! ATGAAAATATTGTAGAGAGT+TGG - tig0019789:7696-7715 Msa1376200:intron 25.0%
! TGAAAATATTGTAGAGAGTT+GGG - tig0019789:7697-7716 Msa1376200:intron 25.0%
! CATGTAGATTCTATATAGTA+AGG - tig0019789:7787-7806 Msa1376200:intron 25.0%
! TATATGATAGAACATTATGG+CGG - tig0019789:8364-8383 Msa1376200:intron 25.0%
!!! GATTGCCATAATTAGTTTTA+AGG - tig0019789:8655-8674 Msa1376200:intron 25.0%
!!! CATAATTAGTTTTAAGGTGA+GGG - tig0019789:8661-8680 Msa1376200:intron 25.0%
! CTATACTAGCAATACATTAT+AGG - tig0019789:8798-8817 Msa1376200:intron 25.0%
! GAAAATAATATATGAACCGA+TGG + tig0019789:8831-8850 None:intergenic 25.0%
!!! AATCGATTTTTGGAATTGTA+AGG + tig0019789:8880-8899 None:intergenic 25.0%
!!! CCATAATAAGAATCGATTTT+TGG + tig0019789:8890-8909 None:intergenic 25.0%
!! CCAAAAATCGATTCTTATTA+TGG - tig0019789:8887-8906 Msa1376200:intron 25.0%
! CTTTATATCAAAGACTGAAA+AGG + tig0019789:9881-9900 None:intergenic 25.0%
! TAAAGCAAGAAAAAATGTAG+GGG - tig0019789:9896-9915 Msa1376200:CDS 25.0%
! ATTTCCAATTTCCTCGTTTT+TGG + tig0019789:6793-6812 None:intergenic 30.0%
GAAAGAAGAAGAACAAAAAG+AGG - tig0019789:6823-6842 Msa1376200:three_prime_UTR 30.0%
GAACAAAAAGAGGAAAATGA+AGG - tig0019789:6833-6852 Msa1376200:three_prime_UTR 30.0%
! AATGATGATAGTGTTGCTAA+TGG - tig0019789:6996-7015 Msa1376200:CDS 30.0%
! ATGATGATAGTGTTGCTAAT+GGG - tig0019789:6997-7016 Msa1376200:CDS 30.0%
GAATGATTCTAATCATCAAG+AGG - tig0019789:7148-7167 Msa1376200:CDS 30.0%
ATAGATAAATCACCTTGTAG+TGG + tig0019789:7210-7229 None:intergenic 30.0%
!!! TATTGATTTTGTGTGAAGGA+AGG - tig0019789:7536-7555 Msa1376200:intron 30.0%
GAAAATATTGTAGAGAGTTG+GGG - tig0019789:7698-7717 Msa1376200:intron 30.0%
! CTTACCATCTTTTCTACAAT+AGG + tig0019789:7729-7748 None:intergenic 30.0%
AGAAAAGATGGTAAGAAACT+CGG - tig0019789:7734-7753 Msa1376200:intron 30.0%
AAGAAATAGATGACATTGAG+AGG - tig0019789:7875-7894 Msa1376200:intron 30.0%
AGAAATAGATGACATTGAGA+GGG - tig0019789:7876-7895 Msa1376200:intron 30.0%
! AATTTAAAACCCTCCTCATT+TGG - tig0019789:7981-8000 Msa1376200:CDS 30.0%
! ATTTAAAACCCTCCTCATTT+GGG - tig0019789:7982-8001 Msa1376200:CDS 30.0%
GAACTCAAAAATTGTATTGG+AGG - tig0019789:8006-8025 Msa1376200:CDS 30.0%
TCAAAAATTGTATTGGAGGA+GGG - tig0019789:8010-8029 Msa1376200:CDS 30.0%
TAATAACAACAATCAAGGGT+CGG + tig0019789:8406-8425 None:intergenic 30.0%
!!! GACATTCACAGTTATTTTGA+AGG - tig0019789:8572-8591 Msa1376200:intron 30.0%
CATGCAATTAATTTCAGTGA+TGG + tig0019789:8606-8625 None:intergenic 30.0%
CCTCACCTTAAAACTAATTA+TGG + tig0019789:8663-8682 None:intergenic 30.0%
!!! CCATAATTAGTTTTAAGGTG+AGG - tig0019789:8660-8679 Msa1376200:intron 30.0%
! TCTTTTTGTGCTTCCTTATA+TGG - tig0019789:8748-8767 Msa1376200:intron 30.0%
CATTATAGGTCTATTTCCAT+CGG - tig0019789:8812-8831 Msa1376200:intron 30.0%
AAATAACAGAGGAAGAACTA+AGG - tig0019789:9196-9215 Msa1376200:intron 30.0%
CTTCTCAAATTGCAATGTAA+AGG - tig0019789:9224-9243 Msa1376200:intron 30.0%
! AACTGCAAATGATTTTTCAC+CGG + tig0019789:9562-9581 None:intergenic 30.0%
AAAGCAAGAAAAAATGTAGG+GGG - tig0019789:9897-9916 Msa1376200:CDS 30.0%
! TTCAGCGTTAATCTGGTTTA+GGG + tig0019789:6631-6650 None:intergenic 35.0%
! ATTCAGCGTTAATCTGGTTT+AGG + tig0019789:6632-6651 None:intergenic 35.0%
GATTAGATTCAGCGTTAATC+TGG + tig0019789:6638-6657 None:intergenic 35.0%
AGAGAGTTTGAAGAAGAAGA+AGG + tig0019789:6663-6682 None:intergenic 35.0%
! CTTAGACAAAATGGGTTTGT+TGG + tig0019789:6709-6728 None:intergenic 35.0%
! TTTTCGCGCTTAGACAAAAT+GGG + tig0019789:6717-6736 None:intergenic 35.0%
! TTTTTCGCGCTTAGACAAAA+TGG + tig0019789:6718-6737 None:intergenic 35.0%
!! TTGGATTGAGTTTGTTGCAA+AGG + tig0019789:6756-6775 None:intergenic 35.0%
ACTCAATCCAATGAAGATGA+TGG - tig0019789:6765-6784 Msa1376200:three_prime_UTR 35.0%
! TTTGGTTCCATCATCTTCAT+TGG + tig0019789:6775-6794 None:intergenic 35.0%
AAACGAGGAAATTGGAAATG+AGG - tig0019789:6794-6813 Msa1376200:three_prime_UTR 35.0%
AACGAGGAAATTGGAAATGA+GGG - tig0019789:6795-6814 Msa1376200:three_prime_UTR 35.0%
GAAATTGGAAATGAGGGTTT+CGG - tig0019789:6801-6820 Msa1376200:three_prime_UTR 35.0%
GAAGAAGAATGAAAATGGTG+TGG - tig0019789:6917-6936 Msa1376200:CDS 35.0%
AATGAAAATGGTGTGGCTAA+TGG - tig0019789:6924-6943 Msa1376200:CDS 35.0%
ATGAAAATGGTGTGGCTAAT+GGG - tig0019789:6925-6944 Msa1376200:CDS 35.0%
! TGATGATAGTGTTGCTAATG+GGG - tig0019789:6998-7017 Msa1376200:CDS 35.0%
! TAATGGGGTTGTTGTTGTTA+AGG - tig0019789:7013-7032 Msa1376200:CDS 35.0%
AAAGAAGAACAAAACTGCAG+AGG - tig0019789:7097-7116 Msa1376200:CDS 35.0%
AACAAAACTGCAGAGGAAAA+TGG - tig0019789:7104-7123 Msa1376200:CDS 35.0%
! ATCATTCTCCTCTGCAATTT+TGG + tig0019789:7135-7154 None:intergenic 35.0%
GTCTCAAACAATGTAATGGT+TGG - tig0019789:7299-7318 Msa1376200:CDS 35.0%
!! TTAATGTGTGTTTGGTGCTA+TGG - tig0019789:7330-7349 Msa1376200:CDS 35.0%
CAAGTTTGAATCAATTCTGG+AGG - tig0019789:7469-7488 Msa1376200:CDS 35.0%
AGCACCTATTGTAGAAAAGA+TGG - tig0019789:7722-7741 Msa1376200:intron 35.0%
AGGGGTTTGTAAAAAAAGGA+AGG - tig0019789:7843-7862 Msa1376200:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - tig0019789:7877-7896 Msa1376200:intron 35.0%
AATTCAAAACCCTCCTCATT+TGG - tig0019789:7928-7947 Msa1376200:CDS 35.0%
ATTCAAAACCCTCCTCATTT+GGG - tig0019789:7929-7948 Msa1376200:CDS 35.0%
! TTTAAAACCCTCCTCATTTG+GGG - tig0019789:7983-8002 Msa1376200:CDS 35.0%
GGGGAACTCAAAAATTGTAT+TGG - tig0019789:8003-8022 Msa1376200:CDS 35.0%
CTCAAAAATTGTATTGGAGG+AGG - tig0019789:8009-8028 Msa1376200:CDS 35.0%
TCATCTGATTTACTTCCCTT+AGG + tig0019789:8242-8261 None:intergenic 35.0%
TAGAGATTAATGAGCTGGAT+AGG - tig0019789:8334-8353 Msa1376200:intron 35.0%
AGAGATTAATGAGCTGGATA+GGG - tig0019789:8335-8354 Msa1376200:intron 35.0%
TGTTCATGCAGTCAAGAAAA+TGG - tig0019789:8494-8513 Msa1376200:intron 35.0%
GTTGCTACGAAAGTTTATGT+TGG - tig0019789:8521-8540 Msa1376200:intron 35.0%
AATTCCCTACTATTCAAGTG+AGG - tig0019789:8547-8566 Msa1376200:intron 35.0%
TCATCCTCACTTGAATAGTA+GGG + tig0019789:8554-8573 None:intergenic 35.0%
TTTGTGCTTCCTTATATGGT+AGG - tig0019789:8752-8771 Msa1376200:intron 35.0%
GCAATCAATCCTACCATATA+AGG + tig0019789:8764-8783 None:intergenic 35.0%
ATTGATTGCAATGTTTCAGC+AGG - tig0019789:8775-8794 Msa1376200:intron 35.0%
ACATTTAATGTTAACAGGGG+AGG - tig0019789:9069-9088 Msa1376200:intron 35.0%
!! CTTCATTTCTGGAGTAAATC+GGG + tig0019789:9136-9155 None:intergenic 35.0%
!! CCTTCATTTCTGGAGTAAAT+CGG + tig0019789:9137-9156 None:intergenic 35.0%
ATTTACTCCAGAAATGAAGG+AGG - tig0019789:9137-9156 Msa1376200:intron 35.0%
TTTACTCCAGAAATGAAGGA+GGG - tig0019789:9138-9157 Msa1376200:intron 35.0%
TTATATCCCTCCTTCATTTC+TGG + tig0019789:9147-9166 None:intergenic 35.0%
TATATGTTGGAAGTCTGTCA+TGG - tig0019789:9172-9191 Msa1376200:intron 35.0%
ATATGTTGGAAGTCTGTCAT+GGG - tig0019789:9173-9192 Msa1376200:intron 35.0%
!!! GCAACTGGTTTTTTGTTCAA+AGG + tig0019789:9396-9415 None:intergenic 35.0%
TTGAACAAAAAACCAGTTGC+AGG - tig0019789:9396-9415 Msa1376200:CDS 35.0%
AGGAAGAATAGAATGTGCTA+CGG - tig0019789:9645-9664 Msa1376200:CDS 35.0%
AAATAGGACAGTATCTGTAG+TGG - tig0019789:9825-9844 Msa1376200:CDS 35.0%
GAGTTTGAAGAAGAAGAAGG+TGG + tig0019789:6660-6679 None:intergenic 40.0%
!! AGACAAAATGGGTTTGTTGG+TGG + tig0019789:6706-6725 None:intergenic 40.0%
!! AGATGATGGAACCAAAAACG+AGG - tig0019789:6779-6798 Msa1376200:three_prime_UTR 40.0%
GGAACCAAAAACGAGGAAAT+TGG - tig0019789:6786-6805 Msa1376200:three_prime_UTR 40.0%
TGAAAATGGTGTGGCTAATG+GGG - tig0019789:6926-6945 Msa1376200:CDS 40.0%
! GAAGAAGAGTGATGATGATG+TGG - tig0019789:6953-6972 Msa1376200:CDS 40.0%
! AGTGATGATGATGTGGCTAA+TGG - tig0019789:6960-6979 Msa1376200:CDS 40.0%
! GTGATGATGATGTGGCTAAT+GGG - tig0019789:6961-6980 Msa1376200:CDS 40.0%
! TGATGATGATGTGGCTAATG+GGG - tig0019789:6962-6981 Msa1376200:CDS 40.0%
AACTGCAGAGGAAAATGGTA+AGG - tig0019789:7109-7128 Msa1376200:CDS 40.0%
AGAGGAAATGCCACAATCTA+CGG - tig0019789:7166-7185 Msa1376200:CDS 40.0%
AATGCCACAATCTACGGTAT+TGG - tig0019789:7172-7191 Msa1376200:CDS 40.0%
TTAGCCAATACCGTAGATTG+TGG + tig0019789:7179-7198 None:intergenic 40.0%
CTAACACTACTACCACTACA+AGG - tig0019789:7195-7214 Msa1376200:CDS 40.0%
GCGCAAGTTTGAATCAATTC+TGG - tig0019789:7466-7485 Msa1376200:CDS 40.0%
TGATAAATGAGGATGTGCGT+TGG - tig0019789:7633-7652 Msa1376200:intron 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - tig0019789:7805-7824 Msa1376200:intron 40.0%
TTCAAAACCCTCCTCATTTG+GGG - tig0019789:7930-7949 Msa1376200:CDS 40.0%
TTAAAACCCTCCTCATTTGG+GGG - tig0019789:7984-8003 Msa1376200:CDS 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + tig0019789:7997-8016 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - tig0019789:8016-8035 Msa1376200:CDS 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + tig0019789:8224-8243 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTA+AGG - tig0019789:8223-8242 Msa1376200:intron 40.0%
AACTCCCAAACAAAGCCTAA+GGG - tig0019789:8224-8243 Msa1376200:intron 40.0%
!! ACTTCCCTTAGGCTTTGTTT+GGG + tig0019789:8231-8250 None:intergenic 40.0%
!! TACTTCCCTTAGGCTTTGTT+TGG + tig0019789:8232-8251 None:intergenic 40.0%
GAGACTAGAGATTAATGAGC+TGG - tig0019789:8329-8348 Msa1376200:intron 40.0%
GCTACGAAAGTTTATGTTGG+AGG - tig0019789:8524-8543 Msa1376200:intron 40.0%
GTCATCCTCACTTGAATAGT+AGG + tig0019789:8555-8574 None:intergenic 40.0%
!!! CACAGTTATTTTGAAGGCTG+TGG - tig0019789:8578-8597 Msa1376200:intron 40.0%
! GTTGCTTGAGTTGCTTTACA+TGG + tig0019789:9114-9133 None:intergenic 40.0%
CCGATTTACTCCAGAAATGA+AGG - tig0019789:9134-9153 Msa1376200:intron 40.0%
TCTGTCATGGGAAATAACAG+AGG - tig0019789:9185-9204 Msa1376200:intron 40.0%
AATGTAAAGGCCATACGACT+TGG - tig0019789:9237-9256 Msa1376200:intron 40.0%
ACTTGGTATGGACAAGGAAA+CGG - tig0019789:9254-9273 Msa1376200:intron 40.0%
! TTGGACCAAAGTGTCTTGTT+TGG - tig0019789:9342-9361 Msa1376200:intron 40.0%
!! ACCAAAGTGTCTTGTTTGGA+AGG - tig0019789:9346-9365 Msa1376200:intron 40.0%
! TTTAGAACCTGCAACTGGTT+TGG + tig0019789:9424-9443 None:intergenic 40.0%
TCAGTTGCAGTTGAAAAACC+AGG - tig0019789:9462-9481 Msa1376200:CDS 40.0%
!! ATTGATTTTTCACCTGCACC+TGG + tig0019789:9483-9502 None:intergenic 40.0%
TCAGTTGCTGGTGAAAAATC+AGG - tig0019789:9534-9553 Msa1376200:CDS 40.0%
TTTCCACTTGCAACAGAACT+TGG + tig0019789:9624-9643 None:intergenic 40.0%
GGAAGAATAGAATGTGCTAC+GGG - tig0019789:9646-9665 Msa1376200:CDS 40.0%
AAGCAGCTATTTGTGGGTTT+GGG + tig0019789:9704-9723 None:intergenic 40.0%
CAGTAGAAGCAGCTATTTGT+GGG + tig0019789:9710-9729 None:intergenic 40.0%
GTTGCAAAGGTCGAAGCTTT+CGG + tig0019789:6743-6762 None:intergenic 45.0%
TGGTAAGGCCAAAATTGCAG+AGG - tig0019789:7124-7143 Msa1376200:CDS 45.0%
GATGGTAAGAAACTCGGCTT+AGG - tig0019789:7740-7759 Msa1376200:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - tig0019789:7809-7828 Msa1376200:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - tig0019789:7810-7829 Msa1376200:intron 45.0%
GGGGAGGGGTTTGTAAAAAA+AGG - tig0019789:7839-7858 Msa1376200:intron 45.0%
TAGATGACATTGAGAGGGGA+AGG - tig0019789:7881-7900 Msa1376200:intron 45.0%
TCAAAACCCTCCTCATTTGG+GGG - tig0019789:7931-7950 Msa1376200:CDS 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG - tig0019789:8020-8039 Msa1376200:CDS 45.0%
TCTGGAGGGTTGGGAATATA+GGG + tig0019789:8181-8200 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + tig0019789:8219-8238 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + tig0019789:8220-8239 None:intergenic 45.0%
GAGAGTAGTCAAACCACTAG+AGG - tig0019789:8260-8279 Msa1376200:intron 45.0%
! TGCATGACTTTTCCTGACAC+TGG - tig0019789:8620-8639 Msa1376200:intron 45.0%
TTCCTGACACTGGCAAGTTT+AGG - tig0019789:8630-8649 Msa1376200:intron 45.0%
TCCTGACACTGGCAAGTTTA+GGG - tig0019789:8631-8650 Msa1376200:intron 45.0%
!! ACAACTTGCTGACGTTTCTG+TGG - tig0019789:8919-8938 Msa1376200:intron 45.0%
ATCAAGAGCCAATGCTCGTT+TGG + tig0019789:8972-8991 None:intergenic 45.0%
!! AAACGAGCATTGGCTCTTGA+TGG - tig0019789:8971-8990 Msa1376200:intron 45.0%
!! AAAGGCCATACGACTTGGTA+TGG - tig0019789:9242-9261 Msa1376200:intron 45.0%
CTTGTCCATACCAAGTCGTA+TGG + tig0019789:9250-9269 None:intergenic 45.0%
!! CATACGACTTGGTATGGACA+AGG - tig0019789:9248-9267 Msa1376200:intron 45.0%
CTTGGTATGGACAAGGAAAC+GGG - tig0019789:9255-9274 Msa1376200:intron 45.0%
AAGGAAACGGGAGAATTTCG+AGG - tig0019789:9267-9286 Msa1376200:intron 45.0%
AGGAAACGGGAGAATTTCGA+GGG - tig0019789:9268-9287 Msa1376200:intron 45.0%
ACTGAAGACAGCACTTGCAT+TGG - tig0019789:9323-9342 Msa1376200:intron 45.0%
GCCTTCCAAACAAGACACTT+TGG + tig0019789:9350-9369 None:intergenic 45.0%
!! ACTGATTTTTCACCTGCACC+TGG + tig0019789:9447-9466 None:intergenic 45.0%
!! ACTGATTTTTCAGCTGCAGC+TGG + tig0019789:9519-9538 None:intergenic 45.0%
GCAGCTGAAAAATCAGTTGC+TGG - tig0019789:9522-9541 Msa1376200:CDS 45.0%
TCATTTGCAGTTGAGCAACC+AGG - tig0019789:9570-9589 Msa1376200:CDS 45.0%
GAACTTGGTTGCTCAACAGT+TGG + tig0019789:9609-9628 None:intergenic 45.0%
CAACCAAGTTCTGTTGCAAG+TGG - tig0019789:9618-9637 Msa1376200:CDS 45.0%
GTTCTGTTGCAAGTGGAAAG+AGG - tig0019789:9625-9644 Msa1376200:CDS 45.0%
GAAGCAGCTATTTGTGGGTT+TGG + tig0019789:9705-9724 None:intergenic 45.0%
GCAGTAGAAGCAGCTATTTG+TGG + tig0019789:9711-9730 None:intergenic 45.0%
!! TACTGCACTTTGAAGCATGC+AGG - tig0019789:9725-9744 Msa1376200:CDS 45.0%
ATATCGTTCCGCCATGAAGA+CGG - tig0019789:9773-9792 Msa1376200:CDS 45.0%
ACACAATCAAGCCGTCTTCA+TGG + tig0019789:9787-9806 None:intergenic 45.0%
GGTAAGAAACTCGGCTTAGG+TGG - tig0019789:7743-7762 Msa1376200:intron 50.0%
GAAACTCGGCTTAGGTGGTT+TGG - tig0019789:7748-7767 Msa1376200:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - tig0019789:7808-7827 Msa1376200:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - tig0019789:7815-7834 Msa1376200:intron 50.0%
ACATTGAGAGGGGAAGGCTT+TGG - tig0019789:7887-7906 Msa1376200:intron 50.0%
CATTGAGAGGGGAAGGCTTT+GGG - tig0019789:7888-7907 Msa1376200:intron 50.0%
ATTGAGAGGGGAAGGCTTTG+GGG - tig0019789:7889-7908 Msa1376200:intron 50.0%
CAAAACCCTCCTCATTTGGG+GGG - tig0019789:7932-7951 Msa1376200:CDS 50.0%
AAAACCCTCCTCATTTGGGG+GGG - tig0019789:7933-7952 Msa1376200:CDS 50.0%
TGAGTTCCCCCAAATGAGGA+GGG + tig0019789:7993-8012 None:intergenic 50.0%
TTGAGTTCCCCCAAATGAGG+AGG + tig0019789:7994-8013 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - tig0019789:8019-8038 Msa1376200:CDS 50.0%
CTGGAGGGTTGGGAATATAG+GGG + tig0019789:8180-8199 None:intergenic 50.0%
! CTCTGGAGGGTTGGGAATAT+AGG + tig0019789:8182-8201 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + tig0019789:8221-8240 None:intergenic 50.0%
AGTCAAACCACTAGAGGCAG+AGG - tig0019789:8266-8285 Msa1376200:intron 50.0%
ACAATCAAGGGTCGGCTACA+TGG + tig0019789:8398-8417 None:intergenic 50.0%
CCTGACACTGGCAAGTTTAG+GGG - tig0019789:8632-8651 Msa1376200:intron 50.0%
CTGACACTGGCAAGTTTAGG+GGG - tig0019789:8633-8652 Msa1376200:intron 50.0%
! TCTTGTTTGGAAGGCCTGTC+AGG - tig0019789:9355-9374 Msa1376200:intron 50.0%
GCCTGTCAGGATAAGTTGTG+CGG - tig0019789:9368-9387 Msa1376200:intron 50.0%
ACCGCACAACTTATCCTGAC+AGG + tig0019789:9372-9391 None:intergenic 50.0%
!! ACTGGTTTGGAACCTGCAAC+TGG + tig0019789:9411-9430 None:intergenic 50.0%
! CCTGGTTTAGAACCTGCAAC+TGG + tig0019789:9429-9448 None:intergenic 50.0%
!! CCAGTTGCAGGTTCTAAACC+AGG - tig0019789:9426-9445 Msa1376200:CDS 50.0%
GCAGTTGAAAAACCAGGTGC+AGG - tig0019789:9468-9487 Msa1376200:CDS 50.0%
GCTGGTGAAAAATCAGGTGC+CGG - tig0019789:9540-9559 Msa1376200:CDS 50.0%
! TGCTACGGGTGTCGTCAAAA+AGG - tig0019789:9660-9679 Msa1376200:CDS 50.0%
CAATCAAGCCGTCTTCATGG+CGG + tig0019789:9784-9803 None:intergenic 50.0%
GAGGATGTGCGTTGGATGTG+TGG - tig0019789:7641-7660 Msa1376200:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - tig0019789:7814-7833 Msa1376200:intron 55.0%
AAACCCTCCTCATTTGGGGG+GGG - tig0019789:7934-7953 Msa1376200:CDS 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + tig0019789:8214-8233 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + tig0019789:8215-8234 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + tig0019789:8216-8235 None:intergenic 55.0%
AGGTCTTCCTCTGCCTCTAG+TGG + tig0019789:8276-8295 None:intergenic 55.0%
CCCCTAAACTTGCCAGTGTC+AGG + tig0019789:8635-8654 None:intergenic 55.0%
CTTCCTGCAGACTGAAGCAG+CGG - tig0019789:8946-8965 Msa1376200:intron 55.0%
GCAGGTTCCAAACCAGTTGC+AGG - tig0019789:9414-9433 Msa1376200:CDS 55.0%
!! GCAGGTTCTAAACCAGGTGC+AGG - tig0019789:9432-9451 Msa1376200:CDS 55.0%
!!! GTTGGTTTTCCTCCTGCACC+TGG + tig0019789:9591-9610 None:intergenic 55.0%
CGAGTTTGGAGGGGAAGGGA+GGG - tig0019789:7819-7838 Msa1376200:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - tig0019789:7820-7839 Msa1376200:intron 60.0%
AAGCCCCCCCCAAATGAGGA+GGG + tig0019789:7940-7959 None:intergenic 60.0%
AAAGCCCCCCCCAAATGAGG+AGG + tig0019789:7941-7960 None:intergenic 60.0%
TCCTCATTTGGGGGGGGCTT+TGG - tig0019789:7940-7959 Msa1376200:CDS 60.0%
CCTCATTTGGGGGGGGCTTT+GGG - tig0019789:7941-7960 Msa1376200:CDS 60.0%
CTCATTTGGGGGGGGCTTTG+GGG - tig0019789:7942-7961 Msa1376200:CDS 60.0%
!! AGGGAAGGCTCTGGAGGGTT+GGG + tig0019789:8190-8209 None:intergenic 60.0%
!! AAGGGAAGGCTCTGGAGGGT+TGG + tig0019789:8191-8210 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + tig0019789:8209-8228 None:intergenic 60.0%
AGCAGCGGCCAAACGAGCAT+TGG - tig0019789:8961-8980 Msa1376200:intron 60.0%
GCAGTTGAGCAACCAGGTGC+AGG - tig0019789:9576-9595 Msa1376200:CDS 60.0%
GTTGAGCAACCAGGTGCAGG+AGG - tig0019789:9579-9598 Msa1376200:CDS 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG - tig0019789:7818-7837 Msa1376200:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - tig0019789:7823-7842 Msa1376200:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - tig0019789:7824-7843 Msa1376200:intron 65.0%
CCCAAAGCCCCCCCCAAATG+AGG + tig0019789:7944-7963 None:intergenic 65.0%
!! GGGGAAGGGAAGGCTCTGGA+GGG + tig0019789:8195-8214 None:intergenic 65.0%
! AGGGGAAGGGAAGGCTCTGG+AGG + tig0019789:8196-8215 None:intergenic 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG + tig0019789:8205-8224 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + tig0019789:8210-8229 None:intergenic 65.0%
TGGCCGCTGCTTCAGTCTGC+AGG + tig0019789:8952-8971 None:intergenic 65.0%
TGGAGGGGAAGGGAGGGGAG+GGG - tig0019789:7825-7844 Msa1376200:intron 70.0%
GGGAGGGGAAGGGAAGGCTC+TGG + tig0019789:8199-8218 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0019789 gene 6579 10018 6579 ID=Msa1376200;Name=Msa1376200
tig0019789 mRNA 6579 10018 6579 ID=Msa1376200-mRNA-1;Parent=Msa1376200;Name=Msa1376200-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.75|1|1|1|4|281|502
tig0019789 exon 6579 7511 6579 ID=Msa1376200-mRNA-1:exon:5004;Parent=Msa1376200-mRNA-1
tig0019789 exon 7595 7641 7595 ID=Msa1376200-mRNA-1:exon:5003;Parent=Msa1376200-mRNA-1
tig0019789 exon 7921 8092 7921 ID=Msa1376200-mRNA-1:exon:5002;Parent=Msa1376200-mRNA-1
tig0019789 exon 9381 10018 9381 ID=Msa1376200-mRNA-1:exon:5001;Parent=Msa1376200-mRNA-1
tig0019789 CDS 9381 10018 9381 ID=Msa1376200-mRNA-1:cds;Parent=Msa1376200-mRNA-1
tig0019789 CDS 7921 8092 7921 ID=Msa1376200-mRNA-1:cds;Parent=Msa1376200-mRNA-1
tig0019789 CDS 7595 7641 7595 ID=Msa1376200-mRNA-1:cds;Parent=Msa1376200-mRNA-1
tig0019789 CDS 6860 7511 6860 ID=Msa1376200-mRNA-1:cds;Parent=Msa1376200-mRNA-1
tig0019789 three_prime_UTR 6579 6859 6579 ID=Msa1376200-mRNA-1:three_prime_utr;Parent=Msa1376200-mRNA-1
Gene Sequence

>Msa1376200

ATGGTTCTATCAAACAAAAAGCTTAAACAGAAGCTTAGAGCTGAATTAACCCTAAACCAGATTAACGCTGAATCTAATCCACCTTCTTCTTCTTCAAACTCTCTTAAACTTCTTATTAACTCTTCCACCAACAAACCCATTTTGTCTAAGCGCGAAAAACTCCGAAAGCTTCGACCTTTGCAACAAACTCAATCCAATGAAGATGATGGAACCAAAAACGAGGAAATTGGAAATGAGGGTTTCGGAAAGAAGAAGAACAAAAAGAGGAAAATGAAGGTAGAAGAGAAAGAAGATGAATCAATTGAAAAGAAGGAGAAGCAAAATAAGAAGAAGAAGAAGAAGAAGAATGAAAATGGTGTGGCTAATGGGGTTGTGAAGAAGAGTGATGATGATGTGGCTAATGGGGTTGTGAAGAAGAATGATGATAGTGTTGCTAATGGGGTTGTTGTTGTTAAGGATGCAAAAAAATCAATGAAAAAGGAGAAGCAAAAGAAGAAGAATCAATTGAAGAAGAAGAGAAAGAAGAACAAAACTGCAGAGGAAAATGGTAAGGCCAAAATTGCAGAGGAGAATGATTCTAATCATCAAGAGGAAATGCCACAATCTACGGTATTGGCTAACACTACTACCACTACAAGTCAAGAAAATGGTGATGTTGCTACGAAAGTTTATGTTGGAGGAATTCCCTACTATTCAAGTGAGGATGACATTCACAGTTATTTTGAAGGCTGTGGCACCATCACTGAAATTAATTGCATGACTTTTCCTGACACTGGCAAGTTTAGGGGGATTGCCATAATTAGTTTTAAGACTGAAGCAGCGGCCAAACGAGCATTGGCTCTTGATGGAGCTGACATGGGAGGACTCTTTCTTAAAATTCAACCATGTAAAGCAACTCAAGCAACCCGATTTACTCCAGAAATGAAGGAGGGATATAATAGAATATATGTTGGAAGTCTGTCATGGGAAATAACAGAGGAAGAACTAAGGAAATTCTTCTCAAATTGCAATGTAAAGGCCATACGACTTGGTATGGACAAGGAAACGGGAGAATTTCGAGGGTATGCTCATGTTGATTTCAGTGATAGTCAGTCACTGAAGACAGCACTTGCATTGGACCAAAGTGTCTTGTTTGGAAGGCCTGTCAGGATAAGTTGTGCGGTTCCTTTGAACAAAAAACCAGTTGCAGGTTCCAAACCAGTTGCAGGTTCTAAACCAGGTGCAGGTGAAAAATCAGTTGCAGTTGAAAAACCAGGTGCAGGTGAAAAATCAATCGCAGTTGAAAAACCAGCTGCAGCTGAAAAATCAGTTGCTGGTGAAAAATCAGGTGCCGGTGAAAAATCATTTGCAGTTGAGCAACCAGGTGCAGGAGGAAAACCAACTGTTGAGCAACCAAGTTCTGTTGCAAGTGGAAAGAGGAAGAATAGAATGTGCTACGGGTGTCGTCAAAAAGGACATAATCTCTCAGAATGCCCAAACCCACAAATAGCTGCTTCTACTGCACTTTGA

Protein sequence

>Msa1376200

MVLSNKKLKQKLRAELTLNQINAESNPPSSSSNSLKLLINSSTNKPILSKREKLRKLRPLQQTQSNEDDGTKNEEIGNEGFGKKKNKKRKMKVEEKEDESIEKKEKQNKKKKKKKNENGVANGVVKKSDDDVANGVVKKNDDSVANGVVVVKDAKKSMKKEKQKKKNQLKKKRKKNKTAEENGKAKIAEENDSNHQEEMPQSTVLANTTTTTSQENGDVATKVYVGGIPYYSSEDDIHSYFEGCGTITEINCMTFPDTGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPCKATQATRFTPEMKEGYNRIYVGSLSWEITEEELRKFFSNCNVKAIRLGMDKETGEFRGYAHVDFSDSQSLKTALALDQSVLFGRPVRISCAVPLNKKPVAGSKPVAGSKPGAGEKSVAVEKPGAGEKSIAVEKPAAAEKSVAGEKSGAGEKSFAVEQPGAGGKPTVEQPSSVASGKRKNRMCYGCRQKGHNLSECPNPQIAASTAL*