Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864230 | XP_003617793.1 | 90.164 | 366 | 34 | 1 | 30 | 395 | 1 | 364 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864230 | sp|Q8VYE2|TIM50_ARATH | 60.289 | 277 | 106 | 2 | 116 | 389 | 81 | 356 | 1.81e-119 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864230 | G7K4N6 | 90.164 | 366 | 34 | 1 | 30 | 395 | 1 | 364 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0743920 | Msa0864230 | 0.995351 | 2.059333e-215 | -8.615850e-47 |
| Msa0748180 | Msa0864230 | 0.994392 | 7.089436e-207 | -8.615850e-47 |
| Msa0139110 | Msa0864230 | 0.994816 | 1.868582e-210 | -8.615850e-47 |
| Msa0252470 | Msa0864230 | 0.804325 | 2.280124e-49 | -8.615850e-47 |
| Msa0291960 | Msa0864230 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0333220 | Msa0864230 | 0.815622 | 8.413378e-52 | -8.615850e-47 |
| Msa0864230 | Msa1071040 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0864230 | Msa1159030 | 0.808371 | 3.200522e-50 | -8.615850e-47 |
| Msa0864230 | Msa1163980 | 0.815724 | 7.984378e-52 | -8.615850e-47 |
| Msa0864230 | Msa1428870 | 0.943751 | 6.826779e-103 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864230 | MtrunA17_Chr5g0446321 | 90.164 | 366 | 34 | 1 | 30 | 395 | 1 | 364 | 0.0 | 606 |
| Msa0864230 | MtrunA17_Chr3g0078241 | 34.973 | 183 | 95 | 6 | 212 | 374 | 282 | 460 | 4.91e-20 | 92.0 |
| Msa0864230 | MtrunA17_Chr2g0303951 | 32.973 | 185 | 104 | 6 | 211 | 379 | 286 | 466 | 3.32e-19 | 89.7 |
| Msa0864230 | MtrunA17_Chr5g0419741 | 30.526 | 190 | 100 | 5 | 224 | 396 | 126 | 300 | 2.58e-17 | 82.4 |
| Msa0864230 | MtrunA17_Chr3g0122541 | 31.293 | 147 | 82 | 4 | 215 | 342 | 268 | 414 | 1.55e-14 | 75.5 |
| Msa0864230 | MtrunA17_Chr2g0284551 | 30.573 | 157 | 90 | 2 | 203 | 343 | 91 | 244 | 3.21e-14 | 72.8 |
| Msa0864230 | MtrunA17_Chr3g0113611 | 28.671 | 143 | 96 | 4 | 246 | 386 | 129 | 267 | 1.41e-12 | 67.8 |
| Msa0864230 | MtrunA17_Chr5g0437111 | 28.244 | 131 | 90 | 3 | 246 | 374 | 155 | 283 | 9.23e-12 | 65.9 |
| Msa0864230 | MtrunA17_Chr3g0122521 | 32.632 | 95 | 63 | 1 | 249 | 342 | 59 | 153 | 3.96e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864230 | AT1G55900.2 | 60.215 | 279 | 107 | 2 | 116 | 391 | 81 | 358 | 1.02e-120 | 356 |
| Msa0864230 | AT1G55900.1 | 60.289 | 277 | 106 | 2 | 116 | 389 | 81 | 356 | 1.84e-120 | 355 |
| Msa0864230 | AT5G11860.3 | 29.834 | 181 | 105 | 5 | 213 | 374 | 99 | 276 | 2.08e-17 | 82.8 |
| Msa0864230 | AT5G11860.5 | 29.834 | 181 | 105 | 5 | 213 | 374 | 99 | 276 | 2.08e-17 | 82.8 |
| Msa0864230 | AT5G11860.1 | 29.834 | 181 | 105 | 5 | 213 | 374 | 99 | 276 | 2.08e-17 | 82.8 |
| Msa0864230 | AT5G11860.4 | 29.834 | 181 | 105 | 5 | 213 | 374 | 99 | 276 | 2.08e-17 | 82.8 |
| Msa0864230 | AT5G11860.2 | 29.834 | 181 | 105 | 5 | 213 | 374 | 99 | 276 | 2.08e-17 | 82.8 |
| Msa0864230 | AT5G45700.1 | 31.638 | 177 | 98 | 5 | 224 | 381 | 99 | 271 | 4.92e-15 | 75.5 |
| Msa0864230 | AT1G29780.1 | 31.169 | 154 | 88 | 4 | 224 | 360 | 51 | 203 | 1.44e-14 | 73.2 |
| Msa0864230 | AT5G46410.2 | 31.737 | 167 | 95 | 5 | 224 | 374 | 285 | 448 | 1.50e-14 | 75.9 |
| Msa0864230 | AT5G46410.3 | 31.737 | 167 | 95 | 5 | 224 | 374 | 282 | 445 | 1.58e-14 | 75.5 |
| Msa0864230 | AT5G46410.1 | 31.737 | 167 | 95 | 5 | 224 | 374 | 282 | 445 | 1.58e-14 | 75.5 |
| Msa0864230 | AT3G55960.1 | 30.075 | 133 | 85 | 4 | 246 | 374 | 155 | 283 | 1.23e-13 | 71.6 |
| Msa0864230 | AT1G29770.1 | 29.032 | 155 | 91 | 4 | 224 | 360 | 104 | 257 | 4.91e-12 | 66.6 |
Find 146 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATATTTGATTTCTAAAA+TGG | 0.149532 | 5_4:-64466832 | Msa0864230:three_prime_UTR |
| GCAATAAAATCCTAAAATTT+AGG | 0.175512 | 5_4:+64466772 | None:intergenic |
| GTCTGCACCCATGGCTTAAT+AGG | 0.239907 | 5_4:+64468244 | None:intergenic |
| AGAATCGAGATCGGAGAATT+TGG | 0.254120 | 5_4:+64472896 | None:intergenic |
| AAACATTGATTCACTACATT+TGG | 0.275640 | 5_4:-64469145 | Msa0864230:CDS |
| GGATCCAGCCTTTCTATAAC+AGG | 0.280220 | 5_4:+64468701 | None:intergenic |
| ACCCGGAGTTGATGCCTTCT+TGG | 0.287511 | 5_4:-64468881 | Msa0864230:CDS |
| TAAAGCAGTAGAGCTTTATT+TGG | 0.300211 | 5_4:-64469397 | Msa0864230:CDS |
| TCTTCACTTTCATTTCAAAC+TGG | 0.317230 | 5_4:+64466890 | None:intergenic |
| TGCTCCTGAGGAAGCAAATC+TGG | 0.325320 | 5_4:+64469200 | None:intergenic |
| TGAGGAAATTCCAGCGGTTA+GGG | 0.343277 | 5_4:+64472659 | None:intergenic |
| GGGGAAGCGGTGGAAGAAAA+AGG | 0.345345 | 5_4:+64472679 | None:intergenic |
| CCTTCCAGATTTGCTTCCTC+AGG | 0.348453 | 5_4:-64469204 | Msa0864230:CDS |
| GGCCTACATAATTCTGTTGT+CGG | 0.351425 | 5_4:-64467075 | Msa0864230:three_prime_UTR |
| AAGAGGTTCAGGTAGGGTTT+TGG | 0.354118 | 5_4:+64472964 | None:intergenic |
| ACCGGCTACGGCGGTGGTTC+CGG | 0.354192 | 5_4:+64472612 | None:intergenic |
| AGCTCAGTTCTTTGAAATAG+TGG | 0.368246 | 5_4:-64468851 | Msa0864230:CDS |
| TTGGAGAGACATTGTTGTTA+TGG | 0.371901 | 5_4:+64472915 | None:intergenic |
| AAATGAAATGAAAGAGGTTC+AGG | 0.372153 | 5_4:+64472953 | None:intergenic |
| GAGAAACATGGAGGAGGTTG+AGG | 0.375735 | 5_4:+64472820 | None:intergenic |
| GAGACCTGCTACTAAGTATC+AGG | 0.375953 | 5_4:-64468651 | Msa0864230:CDS |
| GGAGGAGGAGTGGCGGAAGA+AGG | 0.377139 | 5_4:+64472709 | None:intergenic |
| ATGGTTCAAGACTCTAGTTC+AGG | 0.377307 | 5_4:+64467106 | None:intergenic |
| GTAGCGGAAGAGGGAGGAGG+TGG | 0.379260 | 5_4:+64472739 | None:intergenic |
| GAATGCTTAAATTTCCGTTA+AGG | 0.385398 | 5_4:-64466993 | Msa0864230:three_prime_UTR |
| ACTCTTGTTCAAGTTTCAAT+TGG | 0.392948 | 5_4:-64466944 | Msa0864230:three_prime_UTR |
| GGAGGAGTGGCGGAAGAAGG+TGG | 0.394550 | 5_4:+64472712 | None:intergenic |
| GAAGAGGGAGGAGGTGGAGA+AGG | 0.401258 | 5_4:+64472745 | None:intergenic |
| AGGTGGAGGAGTAGCGGAAG+AGG | 0.403611 | 5_4:+64472729 | None:intergenic |
| TCCAAATGATGCAGGAAAAC+CGG | 0.404155 | 5_4:-64467303 | Msa0864230:intron |
| TACGGCGGTGGTTCCGGTTA+AGG | 0.406728 | 5_4:+64472618 | None:intergenic |
| TTGAGGAAATTCCAGCGGTT+AGG | 0.408146 | 5_4:+64472658 | None:intergenic |
| GTGCAAACTTCTGTAATTTG+AGG | 0.410329 | 5_4:+64466967 | None:intergenic |
| AGGATCTTTCAAAACTAAAC+AGG | 0.413308 | 5_4:-64468336 | Msa0864230:CDS |
| GTAATTTGAGGAGTCCTTAA+CGG | 0.414369 | 5_4:+64466979 | None:intergenic |
| CGAACCGTAAGAGGCGTAAC+CGG | 0.415603 | 5_4:+64472594 | None:intergenic |
| GCTGCCATCGGTGCCTTAAC+CGG | 0.417543 | 5_4:-64472631 | Msa0864230:CDS |
| GAAGGAGTGGCAGAAGGAGG+AGG | 0.419573 | 5_4:+64472763 | None:intergenic |
| GGTTTATTGAAGAACACGTT+AGG | 0.429285 | 5_4:-64469365 | Msa0864230:CDS |
| GTATACAGATGAACAGAATA+TGG | 0.431740 | 5_4:-64468827 | Msa0864230:intron |
| ATAGAACACTAATTTAGATA+TGG | 0.431852 | 5_4:-64466805 | Msa0864230:three_prime_UTR |
| TCTGCACCCATGGCTTAATA+GGG | 0.437365 | 5_4:+64468245 | None:intergenic |
| AAATTTAGGTTGGTTGTTGA+AGG | 0.444026 | 5_4:-64467435 | Msa0864230:intron |
| CACCGATGGCAGCGTATTTG+AGG | 0.444864 | 5_4:+64472641 | None:intergenic |
| AGGAGGAGGTGGAGGAGGAG+TGG | 0.447975 | 5_4:+64472699 | None:intergenic |
| CAGGCGTTTCAAATTGCATA+AGG | 0.448133 | 5_4:-64467985 | Msa0864230:CDS |
| GGAGTAGCGGAAGAGGGAGG+AGG | 0.449116 | 5_4:+64472736 | None:intergenic |
| AGGAGGTGGAGGAGGAGTGG+CGG | 0.449841 | 5_4:+64472702 | None:intergenic |
| TGGATCCTAAGCACTGCATT+AGG | 0.453716 | 5_4:-64468685 | Msa0864230:CDS |
| ATTCCAGCGGTTAGGGGAAG+CGG | 0.455791 | 5_4:+64472666 | None:intergenic |
| GGTGGAGGAGTAGCGGAAGA+GGG | 0.456550 | 5_4:+64472730 | None:intergenic |
| TTATATCAGCCGGGCTAGTA+CGG | 0.463174 | 5_4:+64468057 | None:intergenic |
| GGGAGGAGGTGGAGAAGGAG+TGG | 0.463546 | 5_4:+64472750 | None:intergenic |
| AGTAGCAGCAGGAGCGGCGG+TGG | 0.464184 | 5_4:+64472795 | None:intergenic |
| GGTGGAGAAGGAGTGGCAGA+AGG | 0.464320 | 5_4:+64472757 | None:intergenic |
| CCATCCTGATACTTAGTAGC+AGG | 0.468851 | 5_4:+64468647 | None:intergenic |
| GGAGTGGCAGAAGGAGGAGG+AGG | 0.468973 | 5_4:+64472766 | None:intergenic |
| AGGAGGTTGAGGAGTGACTT+TGG | 0.474619 | 5_4:+64472831 | None:intergenic |
| TTATGCTTGCAGAAATTTCA+AGG | 0.477158 | 5_4:-64470867 | Msa0864230:intron |
| GGAGAAGGAGTGGCAGAAGG+AGG | 0.479566 | 5_4:+64472760 | None:intergenic |
| CCAGAGGCGTCTCTGTCCTC+CGG | 0.480081 | 5_4:+64467284 | None:intergenic |
| GGCGTAACCGGCTACGGCGG+TGG | 0.481279 | 5_4:+64472606 | None:intergenic |
| AGCACTGGTCTTATATCAGC+CGG | 0.483378 | 5_4:+64468047 | None:intergenic |
| CTTCACTTTCATTTCAAACT+GGG | 0.483745 | 5_4:+64466891 | None:intergenic |
| GGAAGGAGCTTGTCTGTGTA+TGG | 0.485204 | 5_4:+64469221 | None:intergenic |
| CACTCGGAATATCACATCCT+TGG | 0.486830 | 5_4:+64468015 | None:intergenic |
| TTAATAGGGACACAGTTCTC+AGG | 0.487617 | 5_4:+64468259 | None:intergenic |
| CTAAGCACTGCATTAGGTAC+AGG | 0.494989 | 5_4:-64468679 | Msa0864230:CDS |
| TTGCATTTGCAAAATGAAGT+TGG | 0.498368 | 5_4:-64466862 | Msa0864230:three_prime_UTR |
| TTGTAGACCCTGTTATAGAA+AGG | 0.499591 | 5_4:-64468709 | Msa0864230:CDS |
| GCAAAAGTTATGTACTTAAG+TGG | 0.505360 | 5_4:-64468307 | Msa0864230:CDS |
| GCTTGGCTTGGTGGAGACGC+CGG | 0.505360 | 5_4:+64472986 | None:intergenic |
| TTCAGTATTGTTACTTCCAG+AGG | 0.505530 | 5_4:+64467268 | None:intergenic |
| TAAAGCTCTACTGCTTTAGC+AGG | 0.507689 | 5_4:+64469402 | None:intergenic |
| AAAGCTTAACAGAGTTGATC+CGG | 0.510006 | 5_4:-64473005 | None:intergenic |
| AGACCCTGTTATAGAAAGGC+TGG | 0.510757 | 5_4:-64468705 | Msa0864230:CDS |
| TTCCAAGAAGGCATCAACTC+CGG | 0.511667 | 5_4:+64468879 | None:intergenic |
| CCTTGGTAAGACTGCAGCAC+TGG | 0.513048 | 5_4:+64468032 | None:intergenic |
| GGAGGAGTAGCGGAAGAGGG+AGG | 0.513402 | 5_4:+64472733 | None:intergenic |
| TATATCAGCCGGGCTAGTAC+GGG | 0.517337 | 5_4:+64468058 | None:intergenic |
| TCTTTATCAGTCTGCACCCA+TGG | 0.518730 | 5_4:+64468235 | None:intergenic |
| GTAATGTGCAGCTTATAGTT+CGG | 0.523902 | 5_4:-64472442 | Msa0864230:intron |
| CCGGAGGACAGAGACGCCTC+TGG | 0.524054 | 5_4:-64467284 | Msa0864230:CDS |
| TTATAGTTCGGACGAAATTG+AGG | 0.524378 | 5_4:-64472430 | Msa0864230:CDS |
| TCCAAGAAGGCATCAACTCC+GGG | 0.525377 | 5_4:+64468880 | None:intergenic |
| GTAGCCGGTTACGCCTCTTA+CGG | 0.529718 | 5_4:-64472598 | Msa0864230:intron |
| TGAATGAAATGAAATGAAAG+AGG | 0.529892 | 5_4:+64472947 | None:intergenic |
| GGACACAGTTCTCAGGTTGT+AGG | 0.531104 | 5_4:+64468266 | None:intergenic |
| TAAAGATGATACAGCTCTTG+TGG | 0.533851 | 5_4:-64468218 | Msa0864230:CDS |
| CTGTACCTAATGCAGTGCTT+AGG | 0.536001 | 5_4:+64468680 | None:intergenic |
| TCGAGAGAAGTAGCTCCATC+AGG | 0.536228 | 5_4:+64472366 | None:intergenic |
| GGAGGTGAATGAGTAGCAGC+AGG | 0.536311 | 5_4:+64472784 | None:intergenic |
| AGCTTTATTTGGATGCAAGA+AGG | 0.537430 | 5_4:-64469386 | Msa0864230:CDS |
| ATATTCCGAGTGAATTCCTC+AGG | 0.538760 | 5_4:-64468004 | Msa0864230:CDS |
| GGAGTGGCGGAAGAAGGTGG+AGG | 0.539928 | 5_4:+64472715 | None:intergenic |
| GTTTATTGAAGAACACGTTA+GGG | 0.542013 | 5_4:-64469364 | Msa0864230:intron |
| GTATACTCAACTGCAGTGAC+AGG | 0.543024 | 5_4:-64470840 | Msa0864230:intron |
| CTTGCAGAAATTTCAAGGGA+TGG | 0.544133 | 5_4:-64470862 | Msa0864230:intron |
| GAAATGAAAGAGGTTCAGGT+AGG | 0.550193 | 5_4:+64472957 | None:intergenic |
| ACCGGAACCACCGCCGTAGC+CGG | 0.551106 | 5_4:-64472613 | Msa0864230:CDS |
| TGGTTCAAGACTCTAGTTCA+GGG | 0.553194 | 5_4:+64467107 | None:intergenic |
| CCACCGCTTCCCCTAACCGC+TGG | 0.553504 | 5_4:-64472669 | Msa0864230:CDS |
| TATGCTTGCAGAAATTTCAA+GGG | 0.560032 | 5_4:-64470866 | Msa0864230:intron |
| GTGACTTTGGCGAAGCGGAA+TGG | 0.560847 | 5_4:+64472844 | None:intergenic |
| GTAGGCAACTTTCTAAAGCA+TGG | 0.562469 | 5_4:+64468284 | None:intergenic |
| CCTGCTACTAAGTATCAGGA+TGG | 0.566998 | 5_4:-64468647 | Msa0864230:CDS |
| CTGTGTCCCTATTAAGCCAT+GGG | 0.571381 | 5_4:-64468251 | Msa0864230:CDS |
| TTCCTCAAATACGCTGCCAT+CGG | 0.575985 | 5_4:-64472643 | Msa0864230:CDS |
| TGAATGAGTAGCAGCAGGAG+CGG | 0.576769 | 5_4:+64472789 | None:intergenic |
| ATCAGGTGGAGTGTACTTAG+CGG | 0.577775 | 5_4:+64472383 | None:intergenic |
| GCTAAGTACACTCCACCTGA+TGG | 0.578725 | 5_4:-64472381 | Msa0864230:CDS |
| AGTTATTGCCCGTACTAGCC+CGG | 0.582795 | 5_4:-64468066 | Msa0864230:CDS |
| TTTGAAATGAAAGTGAAGAG+TGG | 0.583317 | 5_4:-64466886 | Msa0864230:three_prime_UTR |
| AAATGAAAGAGGTTCAGGTA+GGG | 0.586182 | 5_4:+64472958 | None:intergenic |
| ATTGATTCACTACATTTGGA+CGG | 0.591226 | 5_4:-64469141 | Msa0864230:intron |
| GAGGAATGCACTTACACTCA+AGG | 0.594742 | 5_4:+64468182 | None:intergenic |
| GTAAGAGGCGTAACCGGCTA+CGG | 0.595627 | 5_4:+64472600 | None:intergenic |
| ATGTGAAGCGAGATACAAGC+TGG | 0.600307 | 5_4:-64468918 | Msa0864230:intron |
| GGAAGAAGGTGGAGGAGTAG+CGG | 0.600482 | 5_4:+64472723 | None:intergenic |
| ACTGTGTCCCTATTAAGCCA+TGG | 0.604101 | 5_4:-64468252 | Msa0864230:CDS |
| TACCGACAACAGAATTATGT+AGG | 0.612471 | 5_4:+64467073 | None:intergenic |
| CGACGGAGAAGAATCGAGAT+CGG | 0.613375 | 5_4:+64472887 | None:intergenic |
| TTGAAGCCACTGCAAAATCG+AGG | 0.614160 | 5_4:-64467172 | Msa0864230:three_prime_UTR |
| GGTTCCGGTTAAGGCACCGA+TGG | 0.615001 | 5_4:+64472627 | None:intergenic |
| CCTGAGGAAGCAAATCTGGA+AGG | 0.622399 | 5_4:+64469204 | None:intergenic |
| ATGCACTTACACTCAAGGAA+TGG | 0.623566 | 5_4:+64468187 | None:intergenic |
| CGATGACGATGATGCTGCGA+CGG | 0.623580 | 5_4:+64472870 | None:intergenic |
| GTGGATGAGAAACATGGAGG+AGG | 0.623914 | 5_4:+64472814 | None:intergenic |
| CTGAGCTAGATGTTCCAAGA+AGG | 0.625883 | 5_4:+64468867 | None:intergenic |
| AGAGAAGTAGCTCCATCAGG+TGG | 0.626174 | 5_4:+64472369 | None:intergenic |
| GCACTGGTCTTATATCAGCC+GGG | 0.635398 | 5_4:+64468048 | None:intergenic |
| GAGGAGTGACTTTGGCGAAG+CGG | 0.636601 | 5_4:+64472839 | None:intergenic |
| ATGAGTAGCAGCAGGAGCGG+CGG | 0.640320 | 5_4:+64472792 | None:intergenic |
| GCGGCGGTGGATGAGAAACA+TGG | 0.643040 | 5_4:+64472808 | None:intergenic |
| CCAGCGGTTAGGGGAAGCGG+TGG | 0.643133 | 5_4:+64472669 | None:intergenic |
| CTGCTACTAAGTATCAGGAT+GGG | 0.644510 | 5_4:-64468646 | Msa0864230:CDS |
| GTGAACACATGTTGCTCCTG+AGG | 0.649088 | 5_4:+64469188 | None:intergenic |
| GAGGAAATTCCAGCGGTTAG+GGG | 0.651443 | 5_4:+64472660 | None:intergenic |
| AAACGCCTGAGGAATTCACT+CGG | 0.654658 | 5_4:+64467999 | None:intergenic |
| GATCCAGCCTTTCTATAACA+GGG | 0.661553 | 5_4:+64468702 | None:intergenic |
| CGTATTTGAGGAAATTCCAG+CGG | 0.669655 | 5_4:+64472653 | None:intergenic |
| CCAGTGCTGCAGTCTTACCA+AGG | 0.672246 | 5_4:-64468032 | Msa0864230:CDS |
| TATGCAATTTGAAACGCCTG+AGG | 0.679211 | 5_4:+64467988 | None:intergenic |
| AAATGATGCAGGAAAACCGG+AGG | 0.687211 | 5_4:-64467300 | Msa0864230:intron |
| AGAGGCGTAACCGGCTACGG+CGG | 0.690683 | 5_4:+64472603 | None:intergenic |
| GCGGTGGATGAGAAACATGG+AGG | 0.755481 | 5_4:+64472811 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATTATATATTTAA+AGG | + | chr5_4:64468971-64468990 | None:intergenic | 0.0% |
| !!! | TTTTATGATATGATAATTAA+CGG | - | chr5_4:64469575-64469594 | Msa0864230:intron | 10.0% |
| !! | TTATTATAATAATATTGACA+CGG | - | chr5_4:64470192-64470211 | Msa0864230:intron | 10.0% |
| !!! | TTAACTGATTTAAAAAATTT+GGG | - | chr5_4:64471793-64471812 | Msa0864230:intron | 10.0% |
| !!! | AATATATTTGATTTCTAAAA+TGG | - | chr5_4:64472896-64472915 | Msa0864230:CDS | 10.0% |
| !! | TAACATATTAAATTGACTAA+AGG | + | chr5_4:64468299-64468318 | None:intergenic | 15.0% |
| !! | AGTCAATTTAATATGTTAAT+AGG | - | chr5_4:64468301-64468320 | Msa0864230:CDS | 15.0% |
| !!! | ATTTTTACTGTTTTGTTTAT+TGG | - | chr5_4:64468703-64468722 | Msa0864230:CDS | 15.0% |
| !! | TCATAGAAATATCTATTATA+CGG | - | chr5_4:64469812-64469831 | Msa0864230:intron | 15.0% |
| !! | TATTATAATAATATTGACAC+GGG | - | chr5_4:64470193-64470212 | Msa0864230:intron | 15.0% |
| !! | AAATATCAAATATCTTTGAA+TGG | - | chr5_4:64470649-64470668 | Msa0864230:intron | 15.0% |
| !! | AATATCAAATATCTTTGAAT+GGG | - | chr5_4:64470650-64470669 | Msa0864230:intron | 15.0% |
| !! | ATTAATGCTATGAAAATTTA+TGG | - | chr5_4:64470683-64470702 | Msa0864230:intron | 15.0% |
| !! | AGTAAAAATCAACATTATAT+AGG | + | chr5_4:64470780-64470799 | None:intergenic | 15.0% |
| !!! | TGTTGATTTTTACTTTTATT+TGG | - | chr5_4:64470786-64470805 | Msa0864230:intron | 15.0% |
| !!! | CTTAACTGATTTAAAAAATT+TGG | - | chr5_4:64471792-64471811 | Msa0864230:intron | 15.0% |
| !! | CTAAATTTATATCATATGTA+AGG | + | chr5_4:64472281-64472300 | None:intergenic | 15.0% |
| !! | CTTACATATGATATAAATTT+AGG | - | chr5_4:64472279-64472298 | Msa0864230:intron | 15.0% |
| !!! | AAATCTACATTTTATCTATT+TGG | + | chr5_4:64472592-64472611 | None:intergenic | 15.0% |
| !!! | AGTAATAAAACCTAAATTTT+AGG | - | chr5_4:64472946-64472965 | Msa0864230:CDS | 15.0% |
| !! | TATTTATTTGTTTGATGAAG+TGG | - | chr5_4:64468000-64468019 | Msa0864230:CDS | 20.0% |
| !!! | TTTTGTTTCTTGTTTTTAGT+CGG | + | chr5_4:64468548-64468567 | None:intergenic | 20.0% |
| !! | TAACATATTAAACTGACTAA+AGG | + | chr5_4:64468804-64468823 | None:intergenic | 20.0% |
| !! | AGTCAGTTTAATATGTTAAT+AGG | - | chr5_4:64468806-64468825 | Msa0864230:intron | 20.0% |
| !! | TATCTTATATCAGTATTGTT+CGG | - | chr5_4:64468943-64468962 | Msa0864230:intron | 20.0% |
| !! | TAATCATATCAATATGTAGT+AGG | - | chr5_4:64469501-64469520 | Msa0864230:intron | 20.0% |
| !! | AATCATATCAATATGTAGTA+GGG | - | chr5_4:64469502-64469521 | Msa0864230:intron | 20.0% |
| !! | ATTATAATAATATTGACACG+GGG | - | chr5_4:64470194-64470213 | Msa0864230:intron | 20.0% |
| !!! | ATATTTTTATATCCCCAAAA+CGG | + | chr5_4:64470635-64470654 | None:intergenic | 20.0% |
| !!! | AATTACATTTTATAGTTCAC+AGG | - | chr5_4:64471961-64471980 | Msa0864230:intron | 20.0% |
| !! | TCAAAAATGAGATACAAAAA+TGG | - | chr5_4:64472119-64472138 | Msa0864230:intron | 20.0% |
| !! | CAAAAATGAGATACAAAAAT+GGG | - | chr5_4:64472120-64472139 | Msa0864230:intron | 20.0% |
| !! | AAAAATGAGATACAAAAATG+GGG | - | chr5_4:64472121-64472140 | Msa0864230:intron | 20.0% |
| !! | AAATCCAGATATTAAATGAT+TGG | + | chr5_4:64472163-64472182 | None:intergenic | 20.0% |
| !! | CATATGATATAAATTTAGGT+TGG | - | chr5_4:64472283-64472302 | Msa0864230:intron | 20.0% |
| !! | ATAGAACACTAATTTAGATA+TGG | - | chr5_4:64472923-64472942 | Msa0864230:CDS | 20.0% |
| !! | GCAATAAAATCCTAAAATTT+AGG | + | chr5_4:64472959-64472978 | None:intergenic | 20.0% |
| ! | TGAATGAAATGAAATGAAAG+AGG | + | chr5_4:64466784-64466803 | None:intergenic | 25.0% |
| !!! | CGAATTTTTGTTTGATGAAA+TGG | - | chr5_4:64467502-64467521 | Msa0864230:intron | 25.0% |
| !! | ATTTTCTTACATTACTACCA+GGG | - | chr5_4:64467603-64467622 | Msa0864230:intron | 25.0% |
| ! | CCAATAAATTGACAAAATGT+GGG | + | chr5_4:64468087-64468106 | None:intergenic | 25.0% |
| ! | TCCAATAAATTGACAAAATG+TGG | + | chr5_4:64468088-64468107 | None:intergenic | 25.0% |
| !! | ACATTTTGTCAATTTATTGG+AGG | - | chr5_4:64468087-64468106 | Msa0864230:intron | 25.0% |
| ! | GACTAAAAACAAGAAACAAA+AGG | - | chr5_4:64468547-64468566 | Msa0864230:intron | 25.0% |
| ! | ATATCAACCTACTAATGTTA+AGG | + | chr5_4:64468832-64468851 | None:intergenic | 25.0% |
| ! | CAATACTGATATAAGATAAG+TGG | + | chr5_4:64468941-64468960 | None:intergenic | 25.0% |
| ! | AAATCACAAAAGAGATTTAG+TGG | + | chr5_4:64469425-64469444 | None:intergenic | 25.0% |
| ! | ATCATATCAATATGTAGTAG+GGG | - | chr5_4:64469503-64469522 | Msa0864230:intron | 25.0% |
| ! | TTGGTTTAGTTGTATTGTTA+AGG | - | chr5_4:64469891-64469910 | Msa0864230:intron | 25.0% |
| ! | TTTAGTTGTATTGTTAAGGA+GGG | - | chr5_4:64469895-64469914 | Msa0864230:intron | 25.0% |
| !!! | TGCCTTTTAAAATCATTAGA+CGG | - | chr5_4:64470064-64470083 | Msa0864230:intron | 25.0% |
| ! | TCTTGTAGAAGAATCAAATT+TGG | + | chr5_4:64470229-64470248 | None:intergenic | 25.0% |
| ! | TACACATGTACAAACTAATT+TGG | + | chr5_4:64470255-64470274 | None:intergenic | 25.0% |
| !! | TGCTTTTACTTCTCTAATTT+TGG | - | chr5_4:64470395-64470414 | Msa0864230:intron | 25.0% |
| ! | ATTAAAAGTTTAACACAAGG+TGG | + | chr5_4:64470452-64470471 | None:intergenic | 25.0% |
| ! | AGCATTAAAAGTTTAACACA+AGG | + | chr5_4:64470455-64470474 | None:intergenic | 25.0% |
| !! | GTGTTAAACTTTTAATGCTT+TGG | - | chr5_4:64470456-64470475 | Msa0864230:intron | 25.0% |
| !!! | AAACATTGATTCACTACATT+TGG | - | chr5_4:64470583-64470602 | Msa0864230:intron | 25.0% |
| ! | CAGTATCAAAATAAAATGAC+AGG | + | chr5_4:64471307-64471326 | None:intergenic | 25.0% |
| ! | TCATTTAAATACATCTCAAG+AGG | + | chr5_4:64471568-64471587 | None:intergenic | 25.0% |
| ! | TAACAAAAGAACAAAAACCT+TGG | + | chr5_4:64471832-64471851 | None:intergenic | 25.0% |
| ! | AAATGTAATTAACCAGACAA+GGG | + | chr5_4:64471951-64471970 | None:intergenic | 25.0% |
| ! | AAAATGTAATTAACCAGACA+AGG | + | chr5_4:64471952-64471971 | None:intergenic | 25.0% |
| !!! | TGCATATTTTGGCTTTTTTT+CGG | - | chr5_4:64472094-64472113 | Msa0864230:intron | 25.0% |
| !! | AAGTGAAGTTAATTTTCTTG+TGG | - | chr5_4:64472210-64472229 | Msa0864230:intron | 25.0% |
| ! | TATCATATGTAAGGTGAATT+AGG | + | chr5_4:64472272-64472291 | None:intergenic | 25.0% |
| !!! | GCTAAACAGGAATTTTTTTT+AGG | - | chr5_4:64472343-64472362 | Msa0864230:intron | 25.0% |
| AAATGAAATGAAAGAGGTTC+AGG | + | chr5_4:64466778-64466797 | None:intergenic | 30.0% | |
| ! | TTTCTTGAATCGTATTGATC+TGG | - | chr5_4:64467212-64467231 | Msa0864230:exon | 30.0% |
| ! | CATTTTCTTACATTACTACC+AGG | - | chr5_4:64467602-64467621 | Msa0864230:intron | 30.0% |
| AATTATGACAAAACTCAGCA+TGG | - | chr5_4:64467650-64467669 | Msa0864230:intron | 30.0% | |
| ATTCACTGTAATCACATATG+TGG | - | chr5_4:64467875-64467894 | Msa0864230:intron | 30.0% | |
| TTCACTGTAATCACATATGT+GGG | - | chr5_4:64467876-64467895 | Msa0864230:intron | 30.0% | |
| ! | CCCACATTTTGTCAATTTAT+TGG | - | chr5_4:64468084-64468103 | Msa0864230:intron | 30.0% |
| TTGGATGTAACACTTTGATA+TGG | - | chr5_4:64468120-64468139 | Msa0864230:intron | 30.0% | |
| AAACAAAAGGCCTAAAAACA+GGG | - | chr5_4:64468560-64468579 | Msa0864230:intron | 30.0% | |
| GACTAAAAACAGGAAACAAA+AGG | - | chr5_4:64468590-64468609 | Msa0864230:intron | 30.0% | |
| AAACAAAAGGCCTAAAAACA+GGG | - | chr5_4:64468560-64468579 | Msa0864230:intron | 30.0% | |
| TTAAGTTCATGTTGCATAAG+AGG | + | chr5_4:64468672-64468691 | None:intergenic | 30.0% | |
| ! | GTTTATTGGAATTCCTTTTG+TGG | - | chr5_4:64468717-64468736 | Msa0864230:intron | 30.0% |
| TAATAGGCCTTAACATTAGT+AGG | - | chr5_4:64468822-64468841 | Msa0864230:intron | 30.0% | |
| TTATGCTTGCAGAAATTTCA+AGG | - | chr5_4:64468861-64468880 | Msa0864230:CDS | 30.0% | |
| TATGCTTGCAGAAATTTCAA+GGG | - | chr5_4:64468862-64468881 | Msa0864230:CDS | 30.0% | |
| TGTAAAAGTGATCCTTCTTT+CGG | + | chr5_4:64469302-64469321 | None:intergenic | 30.0% | |
| AAGTACAAACATGAATCGAA+TGG | - | chr5_4:64469390-64469409 | Msa0864230:CDS | 30.0% | |
| ! | GTGATTTTGTGTAGTTATCT+TGG | - | chr5_4:64469438-64469457 | Msa0864230:intron | 30.0% |
| GTTTAGTTGTATTGTTAAGG+AGG | - | chr5_4:64469894-64469913 | Msa0864230:intron | 30.0% | |
| ACAAATCCAAAAATCAAACG+TGG | - | chr5_4:64469975-64469994 | Msa0864230:intron | 30.0% | |
| !! | ATTATGCCACGTTTGATTTT+TGG | + | chr5_4:64469984-64470003 | None:intergenic | 30.0% |
| CCAATTTAATTCTAATGCAC+CGG | - | chr5_4:64470022-64470041 | Msa0864230:intron | 30.0% | |
| AGTTTCCTCAAAATCAAAAC+CGG | + | chr5_4:64470044-64470063 | None:intergenic | 30.0% | |
| ! | TGCCGTCTAATGATTTTAAA+AGG | + | chr5_4:64470069-64470088 | None:intergenic | 30.0% |
| ! | ATCATTAGACGGCATATTTT+AGG | - | chr5_4:64470075-64470094 | Msa0864230:intron | 30.0% |
| AACGAAATCTCCTAAAAGTA+TGG | - | chr5_4:64470131-64470150 | Msa0864230:intron | 30.0% | |
| ! | ATGTGATATGCCATACTTTT+AGG | + | chr5_4:64470144-64470163 | None:intergenic | 30.0% |
| !! | TAAAGCAGTAGAGCTTTATT+TGG | - | chr5_4:64470331-64470350 | Msa0864230:intron | 30.0% |
| GTTTATTGAAGAACACGTTA+GGG | - | chr5_4:64470364-64470383 | Msa0864230:intron | 30.0% | |
| GTGGAAAAACATGAAAAGAA+AGG | + | chr5_4:64470433-64470452 | None:intergenic | 30.0% | |
| ! | ATTGATTCACTACATTTGGA+CGG | - | chr5_4:64470587-64470606 | Msa0864230:intron | 30.0% |
| GTATACAGATGAACAGAATA+TGG | - | chr5_4:64470901-64470920 | Msa0864230:intron | 30.0% | |
| ! | TTGTTTCTCTGTATTCTGAA+TGG | - | chr5_4:64470934-64470953 | Msa0864230:intron | 30.0% |
| ATGTCTTTAGTATGTTCTTC+AGG | + | chr5_4:64471259-64471278 | None:intergenic | 30.0% | |
| AAAATGACAGGAAAAAGCAA+AGG | + | chr5_4:64471295-64471314 | None:intergenic | 30.0% | |
| !! | ATTTTGATACTGCACAAATG+TGG | - | chr5_4:64471315-64471334 | Msa0864230:intron | 30.0% |
| AGGATCTTTCAAAACTAAAC+AGG | - | chr5_4:64471392-64471411 | Msa0864230:intron | 30.0% | |
| ! | CTTAAGTACATAACTTTTGC+AGG | + | chr5_4:64471421-64471440 | None:intergenic | 30.0% |
| GCAAAAGTTATGTACTTAAG+TGG | - | chr5_4:64471421-64471440 | Msa0864230:intron | 30.0% | |
| CAATAACTGCATATGGATAA+TGG | + | chr5_4:64471650-64471669 | None:intergenic | 30.0% | |
| ! | TTTTCCATTACAAATCTGTG+AGG | - | chr5_4:64471995-64472014 | Msa0864230:intron | 30.0% |
| TTGCTTCTATTATTGCTGTA+TGG | - | chr5_4:64472019-64472038 | Msa0864230:intron | 30.0% | |
| TTGATGCAAAAGTTAAGTAG+AGG | - | chr5_4:64472071-64472090 | Msa0864230:intron | 30.0% | |
| !! | TTAAGTAGAGGTGCATATTT+TGG | - | chr5_4:64472083-64472102 | Msa0864230:intron | 30.0% |
| !! | AAATTTAGGTTGGTTGTTGA+AGG | - | chr5_4:64472293-64472312 | Msa0864230:intron | 30.0% |
| ! | ACAAATAGTTGATGCTAAAC+AGG | - | chr5_4:64472330-64472349 | Msa0864230:intron | 30.0% |
| AAACACCAGAGTAAAAATGT+TGG | + | chr5_4:64472405-64472424 | None:intergenic | 30.0% | |
| !!! | AGTCTTGAACCATCATTTTT+TGG | - | chr5_4:64472632-64472651 | Msa0864230:CDS | 30.0% |
| TTATGTAGGCCAAAAAATGA+TGG | + | chr5_4:64472644-64472663 | None:intergenic | 30.0% | |
| GAATGCTTAAATTTCCGTTA+AGG | - | chr5_4:64472735-64472754 | Msa0864230:CDS | 30.0% | |
| ! | ACTCTTGTTCAAGTTTCAAT+TGG | - | chr5_4:64472784-64472803 | Msa0864230:CDS | 30.0% |
| CTTCACTTTCATTTCAAACT+GGG | + | chr5_4:64472840-64472859 | None:intergenic | 30.0% | |
| TCTTCACTTTCATTTCAAAC+TGG | + | chr5_4:64472841-64472860 | None:intergenic | 30.0% | |
| ! | TTTGAAATGAAAGTGAAGAG+TGG | - | chr5_4:64472842-64472861 | Msa0864230:CDS | 30.0% |
| TTGCATTTGCAAAATGAAGT+TGG | - | chr5_4:64472866-64472885 | Msa0864230:CDS | 30.0% | |
| AAATGAAAGAGGTTCAGGTA+GGG | + | chr5_4:64466773-64466792 | None:intergenic | 35.0% | |
| ! | TTGGAGAGACATTGTTGTTA+TGG | + | chr5_4:64466816-64466835 | None:intergenic | 35.0% |
| AGAAAAATACGAACCGTAAG+AGG | + | chr5_4:64467146-64467165 | None:intergenic | 35.0% | |
| CAGTGAAAACAGAAATGAAG+AGG | + | chr5_4:64467173-64467192 | None:intergenic | 35.0% | |
| GTAATGTGCAGCTTATAGTT+CGG | - | chr5_4:64467286-64467305 | Msa0864230:CDS | 35.0% | |
| TTATAGTTCGGACGAAATTG+AGG | - | chr5_4:64467298-64467317 | Msa0864230:intron | 35.0% | |
| ! | ATATCTTCGAACAGAAGTGT+CGG | + | chr5_4:64467548-64467567 | None:intergenic | 35.0% |
| TTATAATCTATCACACTCCC+TGG | + | chr5_4:64467623-64467642 | None:intergenic | 35.0% | |
| TGTTCATGTTTGTGCTTCAT+AGG | + | chr5_4:64467805-64467824 | None:intergenic | 35.0% | |
| ACAAACATGAACATCGAACA+CGG | - | chr5_4:64467812-64467831 | Msa0864230:intron | 35.0% | |
| TTGTCAATTTATTGGAGGTG+TGG | - | chr5_4:64468092-64468111 | Msa0864230:intron | 35.0% | |
| GATGTAACACTTTGATATGG+TGG | - | chr5_4:64468123-64468142 | Msa0864230:intron | 35.0% | |
| TCTGCATTGTTTGAATGTGA+TGG | - | chr5_4:64468261-64468280 | Msa0864230:CDS | 35.0% | |
| TAATAGGCCTCAACATTAGT+AGG | - | chr5_4:64468317-64468336 | Msa0864230:CDS | 35.0% | |
| ATGTCAACCTACTAATGTTG+AGG | + | chr5_4:64468327-64468346 | None:intergenic | 35.0% | |
| AAACCACATCACCAACATAA+GGG | - | chr5_4:64468517-64468536 | Msa0864230:intron | 35.0% | |
| GAAACAAAAGGCCTAAAAAC+AGG | - | chr5_4:64468559-64468578 | Msa0864230:intron | 35.0% | |
| GAAACAAAAGGCCTAAAAAC+AGG | - | chr5_4:64468559-64468578 | Msa0864230:intron | 35.0% | |
| !! | GTATGTTGTTCCCTGTTTTT+AGG | + | chr5_4:64468616-64468635 | None:intergenic | 35.0% |
| ! | ACAGCACTATTGCTTAGTTT+TGG | - | chr5_4:64468740-64468759 | Msa0864230:intron | 35.0% |
| TGTTGCGTATACATGAACAT+TGG | - | chr5_4:64469033-64469052 | Msa0864230:intron | 35.0% | |
| TGGAACTAAATGGCATATGA+TGG | + | chr5_4:64469060-64469079 | None:intergenic | 35.0% | |
| CATACCCTTGACCTAAATAA+GGG | - | chr5_4:64469078-64469097 | Msa0864230:intron | 35.0% | |
| ! | ACTTCCCTTATTTAGGTCAA+GGG | + | chr5_4:64469085-64469104 | None:intergenic | 35.0% |
| TAAAAGTGATCCTTCTTTCG+GGG | + | chr5_4:64469300-64469319 | None:intergenic | 35.0% | |
| GTAAAAGTGATCCTTCTTTC+GGG | + | chr5_4:64469301-64469320 | None:intergenic | 35.0% | |
| TTGTGTAGTTATCTTGGCTA+TGG | - | chr5_4:64469444-64469463 | Msa0864230:intron | 35.0% | |
| ATTACCAGTGTTGTCAATTG+TGG | + | chr5_4:64469757-64469776 | None:intergenic | 35.0% | |
| ! | TGTACAGAGTACAGTTCTTT+TGG | + | chr5_4:64469791-64469810 | None:intergenic | 35.0% |
| TAACTAGCAAAGAAGTCAAG+TGG | - | chr5_4:64469865-64469884 | Msa0864230:intron | 35.0% | |
| AACTAGCAAAGAAGTCAAGT+GGG | - | chr5_4:64469866-64469885 | Msa0864230:intron | 35.0% | |
| ATCAAACGTGGCATAATTCT+TGG | - | chr5_4:64469987-64470006 | Msa0864230:intron | 35.0% | |
| TCAAACGTGGCATAATTCTT+GGG | - | chr5_4:64469988-64470007 | Msa0864230:intron | 35.0% | |
| CCGGTGCATTAGAATTAAAT+TGG | + | chr5_4:64470025-64470044 | None:intergenic | 35.0% | |
| GGCACTAAAATATTACATGC+AGG | + | chr5_4:64470308-64470327 | None:intergenic | 35.0% | |
| !! | AGCTTTATTTGGATGCAAGA+AGG | - | chr5_4:64470342-64470361 | Msa0864230:intron | 35.0% |
| GGTTTATTGAAGAACACGTT+AGG | - | chr5_4:64470363-64470382 | Msa0864230:intron | 35.0% | |
| !! | AGCTCAGTTCTTTGAAATAG+TGG | - | chr5_4:64470877-64470896 | Msa0864230:intron | 35.0% |
| TTGTAGACCCTGTTATAGAA+AGG | - | chr5_4:64471019-64471038 | Msa0864230:intron | 35.0% | |
| TAAAGATGATACAGCTCTTG+TGG | - | chr5_4:64471510-64471529 | Msa0864230:intron | 35.0% | |
| CAATCCTCACAGATTTGTAA+TGG | + | chr5_4:64472002-64472021 | None:intergenic | 35.0% | |
| CTTCTATTATTGCTGTATGG+TGG | - | chr5_4:64472022-64472041 | Msa0864230:intron | 35.0% | |
| AGCGCCAATCATTTAATATC+TGG | - | chr5_4:64472156-64472175 | Msa0864230:intron | 35.0% | |
| ! | TTCAGTATTGTTACTTCCAG+AGG | + | chr5_4:64472463-64472482 | None:intergenic | 35.0% |
| TACCGACAACAGAATTATGT+AGG | + | chr5_4:64472658-64472677 | None:intergenic | 35.0% | |
| GTAATTTGAGGAGTCCTTAA+CGG | + | chr5_4:64472752-64472771 | None:intergenic | 35.0% | |
| GTGCAAACTTCTGTAATTTG+AGG | + | chr5_4:64472764-64472783 | None:intergenic | 35.0% | |
| GAAATGAAAGAGGTTCAGGT+AGG | + | chr5_4:64466774-64466793 | None:intergenic | 40.0% | |
| AGAATCGAGATCGGAGAATT+TGG | + | chr5_4:64466835-64466854 | None:intergenic | 40.0% | |
| CGTATTTGAGGAAATTCCAG+CGG | + | chr5_4:64467078-64467097 | None:intergenic | 40.0% | |
| CTAGCGTGAATTGTTGTGTT+TGG | - | chr5_4:64467778-64467797 | Msa0864230:intron | 40.0% | |
| ! | GCACTGACACTTCTAATTGA+AGG | + | chr5_4:64467948-64467967 | None:intergenic | 40.0% |
| CGAGTTGCAAAATTTGTGTG+TGG | - | chr5_4:64468048-64468067 | Msa0864230:CDS | 40.0% | |
| ! | TATTGGAGGTGTGGTATCTT+TGG | - | chr5_4:64468101-64468120 | Msa0864230:intron | 40.0% |
| !! | TATGTTGGTGATGTGGTTTG+TGG | + | chr5_4:64468516-64468535 | None:intergenic | 40.0% |
| CAAACCACATCACCAACATA+AGG | - | chr5_4:64468516-64468535 | Msa0864230:intron | 40.0% | |
| !! | GTCAGTTGTTCCCTGTTTTT+AGG | + | chr5_4:64468573-64468592 | None:intergenic | 40.0% |
| GGGAACAACTGACTAAAAAC+AGG | - | chr5_4:64468580-64468599 | Msa0864230:intron | 40.0% | |
| !!! | CTTAGTTTTGGAGCTTTGCA+TGG | - | chr5_4:64468752-64468771 | Msa0864230:intron | 40.0% |
| !!! | TTTTGGAGCTTTGCATGGTT+AGG | - | chr5_4:64468757-64468776 | Msa0864230:intron | 40.0% |
| CTTGCAGAAATTTCAAGGGA+TGG | - | chr5_4:64468866-64468885 | Msa0864230:CDS | 40.0% | |
| TGGCGTACAGAATAAAGCTA+GGG | + | chr5_4:64468921-64468940 | None:intergenic | 40.0% | |
| ! | GTCAAGGGTATGGAACTAAA+TGG | + | chr5_4:64469070-64469089 | None:intergenic | 40.0% |
| ! | CCTTATTTAGGTCAAGGGTA+TGG | + | chr5_4:64469080-64469099 | None:intergenic | 40.0% |
| CCATACCCTTGACCTAAATA+AGG | - | chr5_4:64469077-64469096 | Msa0864230:intron | 40.0% | |
| ! | GACTTCCCTTATTTAGGTCA+AGG | + | chr5_4:64469086-64469105 | None:intergenic | 40.0% |
| ! | CCTAAGGACTTCCCTTATTT+AGG | + | chr5_4:64469092-64469111 | None:intergenic | 40.0% |
| CCTAAATAAGGGAAGTCCTT+AGG | - | chr5_4:64469089-64469108 | Msa0864230:intron | 40.0% | |
| GTGGGAAAGTTAAAGTGAGA+GGG | - | chr5_4:64469164-64469183 | Msa0864230:CDS | 40.0% | |
| AGTTCCTGCTTTGCATGAAA+GGG | - | chr5_4:64469265-64469284 | Msa0864230:intron | 40.0% | |
| CGATTCATGTTTGTACTTGC+AGG | + | chr5_4:64469388-64469407 | None:intergenic | 40.0% | |
| GCAAGCAGCAATTTATCCAT+GGG | + | chr5_4:64469530-64469549 | None:intergenic | 40.0% | |
| TGCAAGCAGCAATTTATCCA+TGG | + | chr5_4:64469531-64469550 | None:intergenic | 40.0% | |
| !! | TGTGGATAGCGGAAATTTGT+GGG | + | chr5_4:64469739-64469758 | None:intergenic | 40.0% |
| !! | TTGTGGATAGCGGAAATTTG+TGG | + | chr5_4:64469740-64469759 | None:intergenic | 40.0% |
| GTGTTGTCAATTGTGGATAG+CGG | + | chr5_4:64469750-64469769 | None:intergenic | 40.0% | |
| CTATCCACAATTGACAACAC+TGG | - | chr5_4:64469750-64469769 | Msa0864230:intron | 40.0% | |
| TCCTCTGTAGCATTTGATCA+GGG | - | chr5_4:64469837-64469856 | Msa0864230:intron | 40.0% | |
| !!! | ATGCACCGGTTTTGATTTTG+AGG | - | chr5_4:64470036-64470055 | Msa0864230:intron | 40.0% |
| TAAAGCTCTACTGCTTTAGC+AGG | + | chr5_4:64470329-64470348 | None:intergenic | 40.0% | |
| ! | TGTATGGTTCTGTATAACCC+TGG | + | chr5_4:64470494-64470513 | None:intergenic | 40.0% |
| !! | TGGCAGACTTTTAAAAGACC+CGG | - | chr5_4:64470830-64470849 | Msa0864230:intron | 40.0% |
| GATCCAGCCTTTCTATAACA+GGG | + | chr5_4:64471029-64471048 | None:intergenic | 40.0% | |
| CTGCTACTAAGTATCAGGAT+GGG | - | chr5_4:64471082-64471101 | Msa0864230:intron | 40.0% | |
| ! | TTTTTCCCTTTGCCTGTCAT+TGG | - | chr5_4:64471368-64471387 | Msa0864230:intron | 40.0% |
| !! | GTAGGCAACTTTCTAAAGCA+TGG | + | chr5_4:64471447-64471466 | None:intergenic | 40.0% |
| TTAATAGGGACACAGTTCTC+AGG | + | chr5_4:64471472-64471491 | None:intergenic | 40.0% | |
| ATGCACTTACACTCAAGGAA+TGG | + | chr5_4:64471544-64471563 | None:intergenic | 40.0% | |
| !! | CTGCATATGGATAATGGAGA+AGG | + | chr5_4:64471644-64471663 | None:intergenic | 40.0% |
| ATATTCCGAGTGAATTCCTC+AGG | - | chr5_4:64471724-64471743 | Msa0864230:intron | 40.0% | |
| ! | TATGCAATTTGAAACGCCTG+AGG | + | chr5_4:64471743-64471762 | None:intergenic | 40.0% |
| CAGGCGTTTCAAATTGCATA+AGG | - | chr5_4:64471743-64471762 | Msa0864230:intron | 40.0% | |
| TGGGAACTATATTGCAACCA+AGG | - | chr5_4:64471812-64471831 | Msa0864230:intron | 40.0% | |
| GTAATTAACCAGACAAGGGT+GGG | + | chr5_4:64471947-64471966 | None:intergenic | 40.0% | |
| TGTAATTAACCAGACAAGGG+TGG | + | chr5_4:64471948-64471967 | None:intergenic | 40.0% | |
| ! | ATTATTGCTGTATGGTGGTG+TGG | - | chr5_4:64472027-64472046 | Msa0864230:intron | 40.0% |
| ! | TTATTGCTGTATGGTGGTGT+GGG | - | chr5_4:64472028-64472047 | Msa0864230:intron | 40.0% |
| TGAATTAGGAGTGACATGGT+GGG | + | chr5_4:64472258-64472277 | None:intergenic | 40.0% | |
| AAGGTGAATTAGGAGTGACA+TGG | + | chr5_4:64472262-64472281 | None:intergenic | 40.0% | |
| ATGTTGGCGGAAATAAGACA+GGG | + | chr5_4:64472389-64472408 | None:intergenic | 40.0% | |
| AATGTTGGCGGAAATAAGAC+AGG | + | chr5_4:64472390-64472409 | None:intergenic | 40.0% | |
| ! | TTCCGCCAACATTTTTACTC+TGG | - | chr5_4:64472397-64472416 | Msa0864230:CDS | 40.0% |
| CACCAGAGTAAAAATGTTGG+CGG | + | chr5_4:64472402-64472421 | None:intergenic | 40.0% | |
| ! | TGGTGTTTTCCAAATGATGC+AGG | - | chr5_4:64472417-64472436 | Msa0864230:CDS | 40.0% |
| TCCAAATGATGCAGGAAAAC+CGG | - | chr5_4:64472425-64472444 | Msa0864230:CDS | 40.0% | |
| ! | TGGTTCAAGACTCTAGTTCA+GGG | + | chr5_4:64472624-64472643 | None:intergenic | 40.0% |
| ! | ATGGTTCAAGACTCTAGTTC+AGG | + | chr5_4:64472625-64472644 | None:intergenic | 40.0% |
| GGCCTACATAATTCTGTTGT+CGG | - | chr5_4:64472653-64472672 | Msa0864230:CDS | 40.0% | |
| ! | AAGAGGTTCAGGTAGGGTTT+TGG | + | chr5_4:64466767-64466786 | None:intergenic | 45.0% |
| TGAGGAAATTCCAGCGGTTA+GGG | + | chr5_4:64467072-64467091 | None:intergenic | 45.0% | |
| TTGAGGAAATTCCAGCGGTT+AGG | + | chr5_4:64467073-64467092 | None:intergenic | 45.0% | |
| TTCCTCAAATACGCTGCCAT+CGG | - | chr5_4:64467085-64467104 | Msa0864230:three_prime_UTR | 45.0% | |
| ATCAGGTGGAGTGTACTTAG+CGG | + | chr5_4:64467348-64467367 | None:intergenic | 45.0% | |
| ! | CACATATGTGGGTGTCATGT+CGG | - | chr5_4:64467887-64467906 | Msa0864230:intron | 45.0% |
| TATTGGACAGTGACACGTGT+TGG | - | chr5_4:64467910-64467929 | Msa0864230:intron | 45.0% | |
| !! | TAGAAGTGTCAGTGCTACAG+AGG | - | chr5_4:64467953-64467972 | Msa0864230:intron | 45.0% |
| AACCAAGCATAAGACGAGCA+AGG | - | chr5_4:64468457-64468476 | Msa0864230:intron | 45.0% | |
| !! | GTTCCCTTATGTTGGTGATG+TGG | + | chr5_4:64468523-64468542 | None:intergenic | 45.0% |
| AGTCGGTTGTTCCCTTATGT+TGG | + | chr5_4:64468531-64468550 | None:intergenic | 45.0% | |
| GCAATAGTGCTGTCCACAAA+AGG | + | chr5_4:64468733-64468752 | None:intergenic | 45.0% | |
| GTATACTCAACTGCAGTGAC+AGG | - | chr5_4:64468888-64468907 | Msa0864230:CDS | 45.0% | |
| GGCGTACAGAATAAAGCTAG+GGG | + | chr5_4:64468920-64468939 | None:intergenic | 45.0% | |
| GTGGCGTACAGAATAAAGCT+AGG | + | chr5_4:64468922-64468941 | None:intergenic | 45.0% | |
| TGCTTTCTCCAAGTTGCCTA+AGG | + | chr5_4:64469108-64469127 | None:intergenic | 45.0% | |
| CTTTCCCACCACTATCCATT+CGG | + | chr5_4:64469153-64469172 | None:intergenic | 45.0% | |
| GGTGGGAAAGTTAAAGTGAG+AGG | - | chr5_4:64469163-64469182 | Msa0864230:CDS | 45.0% | |
| TCCTCTCAGGATAACTGCTT+GGG | + | chr5_4:64469190-64469209 | None:intergenic | 45.0% | |
| TATCCTGAGAGGAGTTGAGA+AGG | - | chr5_4:64469197-64469216 | Msa0864230:CDS | 45.0% | |
| ATCCTGAGAGGAGTTGAGAA+GGG | - | chr5_4:64469198-64469217 | Msa0864230:CDS | 45.0% | |
| AGGAGTTGAGAAGGGAGTTA+GGG | - | chr5_4:64469206-64469225 | Msa0864230:CDS | 45.0% | |
| CAGTTCCTGCTTTGCATGAA+AGG | - | chr5_4:64469264-64469283 | Msa0864230:intron | 45.0% | |
| GTTCCTGCTTTGCATGAAAG+GGG | - | chr5_4:64469266-64469285 | Msa0864230:intron | 45.0% | |
| !! | CTTTGCATGAAAGGGGTACT+TGG | - | chr5_4:64469273-64469292 | Msa0864230:intron | 45.0% |
| ! | AGTCAAGGGCGGTATGTTTT+GGG | + | chr5_4:64469329-64469348 | None:intergenic | 45.0% |
| AATATGTAGTAGGGGTCCCA+TGG | - | chr5_4:64469511-64469530 | Msa0864230:intron | 45.0% | |
| CTGATCAAATGCTACAGAGG+AGG | + | chr5_4:64469838-64469857 | None:intergenic | 45.0% | |
| CTCCTCTGTAGCATTTGATC+AGG | - | chr5_4:64469836-64469855 | Msa0864230:intron | 45.0% | |
| CAAAGAAGTCAAGTGGGCAT+TGG | - | chr5_4:64469872-64469891 | Msa0864230:intron | 45.0% | |
| GTTGTATTGTTAAGGAGGGC+TGG | - | chr5_4:64469899-64469918 | Msa0864230:intron | 45.0% | |
| TATAACCCTGGAAGGAAGCA+TGG | + | chr5_4:64470482-64470501 | None:intergenic | 45.0% | |
| ! | TGGTTCTGTATAACCCTGGA+AGG | + | chr5_4:64470490-64470509 | None:intergenic | 45.0% |
| ! | AACCTCACATGCACCGTTTT+GGG | - | chr5_4:64470619-64470638 | Msa0864230:intron | 45.0% |
| ATGTGAAGCGAGATACAAGC+TGG | - | chr5_4:64470810-64470829 | Msa0864230:intron | 45.0% | |
| !! | TTCCAAGAAGGCATCAACTC+CGG | + | chr5_4:64470852-64470871 | None:intergenic | 45.0% |
| CTGAGCTAGATGTTCCAAGA+AGG | + | chr5_4:64470864-64470883 | None:intergenic | 45.0% | |
| AGACCCTGTTATAGAAAGGC+TGG | - | chr5_4:64471023-64471042 | Msa0864230:intron | 45.0% | |
| GGATCCAGCCTTTCTATAAC+AGG | + | chr5_4:64471030-64471049 | None:intergenic | 45.0% | |
| ! | TGGATCCTAAGCACTGCATT+AGG | - | chr5_4:64471043-64471062 | Msa0864230:intron | 45.0% |
| CTGTACCTAATGCAGTGCTT+AGG | + | chr5_4:64471051-64471070 | None:intergenic | 45.0% | |
| ! | CTAAGCACTGCATTAGGTAC+AGG | - | chr5_4:64471049-64471068 | Msa0864230:intron | 45.0% |
| GAGACCTGCTACTAAGTATC+AGG | - | chr5_4:64471077-64471096 | Msa0864230:intron | 45.0% | |
| CCATCCTGATACTTAGTAGC+AGG | + | chr5_4:64471084-64471103 | None:intergenic | 45.0% | |
| CCTGCTACTAAGTATCAGGA+TGG | - | chr5_4:64471081-64471100 | Msa0864230:intron | 45.0% | |
| TGAAAGATCCTGCCAATGAC+AGG | + | chr5_4:64471383-64471402 | None:intergenic | 45.0% | |
| ACTGTGTCCCTATTAAGCCA+TGG | - | chr5_4:64471476-64471495 | Msa0864230:intron | 45.0% | |
| CTGTGTCCCTATTAAGCCAT+GGG | - | chr5_4:64471477-64471496 | Msa0864230:intron | 45.0% | |
| TCTGCACCCATGGCTTAATA+GGG | + | chr5_4:64471486-64471505 | None:intergenic | 45.0% | |
| TCTTTATCAGTCTGCACCCA+TGG | + | chr5_4:64471496-64471515 | None:intergenic | 45.0% | |
| GAGGAATGCACTTACACTCA+AGG | + | chr5_4:64471549-64471568 | None:intergenic | 45.0% | |
| GTACGGGCAATAACTGCATA+TGG | + | chr5_4:64471657-64471676 | None:intergenic | 45.0% | |
| !! | TTATATCAGCCGGGCTAGTA+CGG | + | chr5_4:64471674-64471693 | None:intergenic | 45.0% |
| !! | AGCACTGGTCTTATATCAGC+CGG | + | chr5_4:64471684-64471703 | None:intergenic | 45.0% |
| CACTCGGAATATCACATCCT+TGG | + | chr5_4:64471716-64471735 | None:intergenic | 45.0% | |
| AAACGCCTGAGGAATTCACT+CGG | + | chr5_4:64471732-64471751 | None:intergenic | 45.0% | |
| GTGAATTAGGAGTGACATGG+TGG | + | chr5_4:64472259-64472278 | None:intergenic | 45.0% | |
| ! | TCCGGTTTTCCTGCATCATT+TGG | + | chr5_4:64472429-64472448 | None:intergenic | 45.0% |
| AAATGATGCAGGAAAACCGG+AGG | - | chr5_4:64472428-64472447 | Msa0864230:CDS | 45.0% | |
| TTGAAGCCACTGCAAAATCG+AGG | - | chr5_4:64472556-64472575 | Msa0864230:intron | 45.0% | |
| ! | ATCACTCCTCGATTTTGCAG+TGG | + | chr5_4:64472565-64472584 | None:intergenic | 45.0% |
| !!! | TAAATATATAATTAATTTTG+AGG | - | chr5_4:64468972-64468991 | Msa0864230:intron | 5.0% |
| !!! | GTTCAGGTAGGGTTTTGGCT+TGG | + | chr5_4:64466762-64466781 | None:intergenic | 50.0% |
| CGACGGAGAAGAATCGAGAT+CGG | + | chr5_4:64466844-64466863 | None:intergenic | 50.0% | |
| AGGAGGTTGAGGAGTGACTT+TGG | + | chr5_4:64466900-64466919 | None:intergenic | 50.0% | |
| GAGAAACATGGAGGAGGTTG+AGG | + | chr5_4:64466911-64466930 | None:intergenic | 50.0% | |
| GTGGATGAGAAACATGGAGG+AGG | + | chr5_4:64466917-64466936 | None:intergenic | 50.0% | |
| TGAATGAGTAGCAGCAGGAG+CGG | + | chr5_4:64466942-64466961 | None:intergenic | 50.0% | |
| GAAGAAAAAGGAGGAGGTGG+AGG | + | chr5_4:64467040-64467059 | None:intergenic | 50.0% | |
| GTGGAAGAAAAAGGAGGAGG+TGG | + | chr5_4:64467043-64467062 | None:intergenic | 50.0% | |
| GAAGCGGTGGAAGAAAAAGG+AGG | + | chr5_4:64467049-64467068 | None:intergenic | 50.0% | |
| GAGGAAATTCCAGCGGTTAG+GGG | + | chr5_4:64467071-64467090 | None:intergenic | 50.0% | |
| GCTAAGTACACTCCACCTGA+TGG | - | chr5_4:64467347-64467366 | Msa0864230:intron | 50.0% | |
| AGAGAAGTAGCTCCATCAGG+TGG | + | chr5_4:64467362-64467381 | None:intergenic | 50.0% | |
| TCGAGAGAAGTAGCTCCATC+AGG | + | chr5_4:64467365-64467384 | None:intergenic | 50.0% | |
| ! | TGTGGGTGTCATGTCGGTAT+TGG | - | chr5_4:64467893-64467912 | Msa0864230:intron | 50.0% |
| CAGTGACACGTGTTGGACAT+CGG | - | chr5_4:64467917-64467936 | Msa0864230:intron | 50.0% | |
| GTGGCTCTTCGAATACGAAC+TGG | - | chr5_4:64468019-64468038 | Msa0864230:CDS | 50.0% | |
| TACTCAACTGCAGTGACAGG+TGG | - | chr5_4:64468891-64468910 | Msa0864230:CDS | 50.0% | |
| ACTCAACTGCAGTGACAGGT+GGG | - | chr5_4:64468892-64468911 | Msa0864230:CDS | 50.0% | |
| CATGTGAGTGTCTCTTCCCT+TGG | - | chr5_4:64469000-64469019 | Msa0864230:intron | 50.0% | |
| GTGTCTCTTCCCTTGGACTT+CGG | - | chr5_4:64469007-64469026 | Msa0864230:intron | 50.0% | |
| TGTCTCTTCCCTTGGACTTC+GGG | - | chr5_4:64469008-64469027 | Msa0864230:intron | 50.0% | |
| GCAACATTCCCGAAGTCCAA+GGG | + | chr5_4:64469019-64469038 | None:intergenic | 50.0% | |
| AGGGAAGTCCTTAGGCAACT+TGG | - | chr5_4:64469097-64469116 | Msa0864230:intron | 50.0% | |
| ! | ACTTGGAGAAAGCATGTGCC+TGG | - | chr5_4:64469114-64469133 | Msa0864230:intron | 50.0% |
| ! | GAGTCCGAATGGATAGTGGT+GGG | - | chr5_4:64469146-64469165 | Msa0864230:CDS | 50.0% |
| CTCCTCTCAGGATAACTGCT+TGG | + | chr5_4:64469191-64469210 | None:intergenic | 50.0% | |
| GAGGAGTTGAGAAGGGAGTT+AGG | - | chr5_4:64469205-64469224 | Msa0864230:CDS | 50.0% | |
| AGGGAAAAGAACCTCCCACT+AGG | - | chr5_4:64469225-64469244 | Msa0864230:CDS | 50.0% | |
| GAAAAGAACCTCCCACTAGG+TGG | - | chr5_4:64469228-64469247 | Msa0864230:CDS | 50.0% | |
| CCTTCCTCAAACCACCTAGT+GGG | + | chr5_4:64469242-64469261 | None:intergenic | 50.0% | |
| CCACTAGGTGGTTTGAGGAA+GGG | - | chr5_4:64469240-64469259 | Msa0864230:intron | 50.0% | |
| CACTAGGTGGTTTGAGGAAG+GGG | - | chr5_4:64469241-64469260 | Msa0864230:intron | 50.0% | |
| GTACCCCTTTCATGCAAAGC+AGG | + | chr5_4:64469272-64469291 | None:intergenic | 50.0% | |
| ! | CAGTCAAGGGCGGTATGTTT+TGG | + | chr5_4:64469330-64469349 | None:intergenic | 50.0% |
| CAAAACATACCGCCCTTGAC+TGG | - | chr5_4:64469328-64469347 | Msa0864230:intron | 50.0% | |
| ! | AGTGTTGTTCCAGTCAAGGG+CGG | + | chr5_4:64469340-64469359 | None:intergenic | 50.0% |
| ! | GGCAGTGTTGTTCCAGTCAA+GGG | + | chr5_4:64469343-64469362 | None:intergenic | 50.0% |
| ! | TGGCAGTGTTGTTCCAGTCA+AGG | + | chr5_4:64469344-64469363 | None:intergenic | 50.0% |
| TGACTGGAACAACACTGCCA+AGG | - | chr5_4:64469344-64469363 | Msa0864230:intron | 50.0% | |
| GACTGGAACAACACTGCCAA+GGG | - | chr5_4:64469345-64469364 | Msa0864230:intron | 50.0% | |
| AACACTGCCAAGGGTAGGAA+TGG | - | chr5_4:64469354-64469373 | Msa0864230:intron | 50.0% | |
| AGTACGACCATTCCTACCCT+TGG | + | chr5_4:64469364-64469383 | None:intergenic | 50.0% | |
| GCTGCTTGCATATGCGCATT+AGG | - | chr5_4:64469541-64469560 | Msa0864230:intron | 50.0% | |
| GTTATGCTGCGATGTCGTAG+CGG | - | chr5_4:64469634-64469653 | Msa0864230:intron | 50.0% | |
| GCCCTGATCAAATGCTACAG+AGG | + | chr5_4:64469841-64469860 | None:intergenic | 50.0% | |
| TTTGGCCATGCTTCCTTCCA+GGG | - | chr5_4:64470474-64470493 | Msa0864230:intron | 50.0% | |
| GGAAGGAGCTTGTCTGTGTA+TGG | + | chr5_4:64470510-64470529 | None:intergenic | 50.0% | |
| CCTGAGGAAGCAAATCTGGA+AGG | + | chr5_4:64470527-64470546 | None:intergenic | 50.0% | |
| ! | CCTTCCAGATTTGCTTCCTC+AGG | - | chr5_4:64470524-64470543 | Msa0864230:intron | 50.0% |
| TGCTCCTGAGGAAGCAAATC+TGG | + | chr5_4:64470531-64470550 | None:intergenic | 50.0% | |
| GTGAACACATGTTGCTCCTG+AGG | + | chr5_4:64470543-64470562 | None:intergenic | 50.0% | |
| ! | CAACCTCACATGCACCGTTT+TGG | - | chr5_4:64470618-64470637 | Msa0864230:intron | 50.0% |
| ! | ACCTCACATGCACCGTTTTG+GGG | - | chr5_4:64470620-64470639 | Msa0864230:intron | 50.0% |
| !! | TCCAAGAAGGCATCAACTCC+GGG | + | chr5_4:64470851-64470870 | None:intergenic | 50.0% |
| TCCTGCCAATGACAGGCAAA+GGG | + | chr5_4:64471376-64471395 | None:intergenic | 50.0% | |
| ATCCTGCCAATGACAGGCAA+AGG | + | chr5_4:64471377-64471396 | None:intergenic | 50.0% | |
| ! | GGACACAGTTCTCAGGTTGT+AGG | + | chr5_4:64471465-64471484 | None:intergenic | 50.0% |
| GTCTGCACCCATGGCTTAAT+AGG | + | chr5_4:64471487-64471506 | None:intergenic | 50.0% | |
| AGTTATTGCCCGTACTAGCC+CGG | - | chr5_4:64471662-64471681 | Msa0864230:intron | 50.0% | |
| !! | TATATCAGCCGGGCTAGTAC+GGG | + | chr5_4:64471673-64471692 | None:intergenic | 50.0% |
| !! | GCACTGGTCTTATATCAGCC+GGG | + | chr5_4:64471683-64471702 | None:intergenic | 50.0% |
| ! | TGTATGGTGGTGTGGGACAA+GGG | - | chr5_4:64472035-64472054 | Msa0864230:intron | 50.0% |
| !!! | AGGGTTTTGGCTTGGCTTGG+TGG | + | chr5_4:64466754-64466773 | None:intergenic | 55.0% |
| !!! | GGTAGGGTTTTGGCTTGGCT+TGG | + | chr5_4:64466757-64466776 | None:intergenic | 55.0% |
| CGATGACGATGATGCTGCGA+CGG | + | chr5_4:64466861-64466880 | None:intergenic | 55.0% | |
| GTGACTTTGGCGAAGCGGAA+TGG | + | chr5_4:64466887-64466906 | None:intergenic | 55.0% | |
| GAGGAGTGACTTTGGCGAAG+CGG | + | chr5_4:64466892-64466911 | None:intergenic | 55.0% | |
| GCGGTGGATGAGAAACATGG+AGG | + | chr5_4:64466920-64466939 | None:intergenic | 55.0% | |
| GGAGGTGAATGAGTAGCAGC+AGG | + | chr5_4:64466947-64466966 | None:intergenic | 55.0% | |
| GGAAGAAGGTGGAGGAGTAG+CGG | + | chr5_4:64467008-64467027 | None:intergenic | 55.0% | |
| GAAAAAGGAGGAGGTGGAGG+AGG | + | chr5_4:64467037-64467056 | None:intergenic | 55.0% | |
| GCGGTGGAAGAAAAAGGAGG+AGG | + | chr5_4:64467046-64467065 | None:intergenic | 55.0% | |
| GGGGAAGCGGTGGAAGAAAA+AGG | + | chr5_4:64467052-64467071 | None:intergenic | 55.0% | |
| ATTCCAGCGGTTAGGGGAAG+CGG | + | chr5_4:64467065-64467084 | None:intergenic | 55.0% | |
| CACCGATGGCAGCGTATTTG+AGG | + | chr5_4:64467090-64467109 | None:intergenic | 55.0% | |
| ! | GTAAGAGGCGTAACCGGCTA+CGG | + | chr5_4:64467131-64467150 | None:intergenic | 55.0% |
| GTAGCCGGTTACGCCTCTTA+CGG | - | chr5_4:64467130-64467149 | Msa0864230:three_prime_UTR | 55.0% | |
| ! | CGAACCGTAAGAGGCGTAAC+CGG | + | chr5_4:64467137-64467156 | None:intergenic | 55.0% |
| CGCCTTGCTCGTCTTATGCT+TGG | + | chr5_4:64468462-64468481 | None:intergenic | 55.0% | |
| CGCAACATTCCCGAAGTCCA+AGG | + | chr5_4:64469020-64469039 | None:intergenic | 55.0% | |
| AAAGCATGTGCCTGGCGTGT+GGG | - | chr5_4:64469122-64469141 | Msa0864230:intron | 55.0% | |
| ! | CGAGTCCGAATGGATAGTGG+TGG | - | chr5_4:64469145-64469164 | Msa0864230:CDS | 55.0% |
| GCCCAAGCAGTTATCCTGAG+AGG | - | chr5_4:64469186-64469205 | Msa0864230:CDS | 55.0% | |
| CTCCCTTCTCAACTCCTCTC+AGG | + | chr5_4:64469203-64469222 | None:intergenic | 55.0% | |
| ACCTCCCACTAGGTGGTTTG+AGG | - | chr5_4:64469235-64469254 | Msa0864230:CDS | 55.0% | |
| TCCTCAAACCACCTAGTGGG+AGG | + | chr5_4:64469239-64469258 | None:intergenic | 55.0% | |
| CCCACTAGGTGGTTTGAGGA+AGG | - | chr5_4:64469239-64469258 | Msa0864230:intron | 55.0% | |
| CCCTTCCTCAAACCACCTAG+TGG | + | chr5_4:64469243-64469262 | None:intergenic | 55.0% | |
| GGTACTTGGTCCCCGAAAGA+AGG | - | chr5_4:64469287-64469306 | Msa0864230:intron | 55.0% | |
| GGAACAACACTGCCAAGGGT+AGG | - | chr5_4:64469349-64469368 | Msa0864230:intron | 55.0% | |
| CTTTGGCCATGCTTCCTTCC+AGG | - | chr5_4:64470473-64470492 | Msa0864230:intron | 55.0% | |
| TCCCCAAAACGGTGCATGTG+AGG | + | chr5_4:64470624-64470643 | None:intergenic | 55.0% | |
| !! | ACCCGGAGTTGATGCCTTCT+TGG | - | chr5_4:64470847-64470866 | Msa0864230:CDS | 55.0% |
| TCCCTTTGCCTGTCATTGGC+AGG | - | chr5_4:64471372-64471391 | Msa0864230:intron | 55.0% | |
| CCTTGGTAAGACTGCAGCAC+TGG | + | chr5_4:64471699-64471718 | None:intergenic | 55.0% | |
| CCAGTGCTGCAGTCTTACCA+AGG | - | chr5_4:64471696-64471715 | Msa0864230:intron | 55.0% | |
| AAACTACGCCCACCCTTGTC+TGG | - | chr5_4:64471936-64471955 | Msa0864230:intron | 55.0% | |
| ! | CTGTATGGTGGTGTGGGACA+AGG | - | chr5_4:64472034-64472053 | Msa0864230:intron | 55.0% |
| GCGGCGGTGGATGAGAAACA+TGG | + | chr5_4:64466923-64466942 | None:intergenic | 60.0% | |
| ATGAGTAGCAGCAGGAGCGG+CGG | + | chr5_4:64466939-64466958 | None:intergenic | 60.0% | |
| GAAGGAGTGGCAGAAGGAGG+AGG | + | chr5_4:64466968-64466987 | None:intergenic | 60.0% | |
| GGAGAAGGAGTGGCAGAAGG+AGG | + | chr5_4:64466971-64466990 | None:intergenic | 60.0% | |
| GGTGGAGAAGGAGTGGCAGA+AGG | + | chr5_4:64466974-64466993 | None:intergenic | 60.0% | |
| GAAGAGGGAGGAGGTGGAGA+AGG | + | chr5_4:64466986-64467005 | None:intergenic | 60.0% | |
| ! | GGTGGAGGAGTAGCGGAAGA+GGG | + | chr5_4:64467001-64467020 | None:intergenic | 60.0% |
| ! | AGGTGGAGGAGTAGCGGAAG+AGG | + | chr5_4:64467002-64467021 | None:intergenic | 60.0% |
| ! | GCTGCCATCGGTGCCTTAAC+CGG | - | chr5_4:64467097-64467116 | Msa0864230:three_prime_UTR | 60.0% |
| !! | GGTTCCGGTTAAGGCACCGA+TGG | + | chr5_4:64467104-64467123 | None:intergenic | 60.0% |
| TACGGCGGTGGTTCCGGTTA+AGG | + | chr5_4:64467113-64467132 | None:intergenic | 60.0% | |
| ! | GAAAGCATGTGCCTGGCGTG+TGG | - | chr5_4:64469121-64469140 | Msa0864230:intron | 60.0% |
| GGGCGAGTCCGAATGGATAG+TGG | - | chr5_4:64469142-64469161 | Msa0864230:CDS | 60.0% | |
| GTGTGGGACAAGGGACAGTC+TGG | - | chr5_4:64472044-64472063 | Msa0864230:intron | 60.0% | |
| !! | GCTTGGCTTGGTGGAGACGC+CGG | + | chr5_4:64466745-64466764 | None:intergenic | 65.0% |
| GGAGTGGCAGAAGGAGGAGG+AGG | + | chr5_4:64466965-64466984 | None:intergenic | 65.0% | |
| GGGAGGAGGTGGAGAAGGAG+TGG | + | chr5_4:64466981-64467000 | None:intergenic | 65.0% | |
| ! | GTAGCGGAAGAGGGAGGAGG+TGG | + | chr5_4:64466992-64467011 | None:intergenic | 65.0% |
| ! | GGAGTAGCGGAAGAGGGAGG+AGG | + | chr5_4:64466995-64467014 | None:intergenic | 65.0% |
| ! | GGAGGAGTAGCGGAAGAGGG+AGG | + | chr5_4:64466998-64467017 | None:intergenic | 65.0% |
| ! | GGAGTGGCGGAAGAAGGTGG+AGG | + | chr5_4:64467016-64467035 | None:intergenic | 65.0% |
| ! | GGAGGAGTGGCGGAAGAAGG+TGG | + | chr5_4:64467019-64467038 | None:intergenic | 65.0% |
| ! | GGAGGAGGAGTGGCGGAAGA+AGG | + | chr5_4:64467022-64467041 | None:intergenic | 65.0% |
| AGGAGGTGGAGGAGGAGTGG+CGG | + | chr5_4:64467029-64467048 | None:intergenic | 65.0% | |
| AGGAGGAGGTGGAGGAGGAG+TGG | + | chr5_4:64467032-64467051 | None:intergenic | 65.0% | |
| ! | AGAGGCGTAACCGGCTACGG+CGG | + | chr5_4:64467128-64467147 | None:intergenic | 65.0% |
| !! | CCAGAGGCGTCTCTGTCCTC+CGG | + | chr5_4:64472447-64472466 | None:intergenic | 65.0% |
| AGTAGCAGCAGGAGCGGCGG+TGG | + | chr5_4:64466936-64466955 | None:intergenic | 70.0% | |
| CCAGCGGTTAGGGGAAGCGG+TGG | + | chr5_4:64467062-64467081 | None:intergenic | 70.0% | |
| CCACCGCTTCCCCTAACCGC+TGG | - | chr5_4:64467059-64467078 | Msa0864230:three_prime_UTR | 70.0% | |
| ACCGGAACCACCGCCGTAGC+CGG | - | chr5_4:64467115-64467134 | Msa0864230:three_prime_UTR | 70.0% | |
| ACCGGCTACGGCGGTGGTTC+CGG | + | chr5_4:64467119-64467138 | None:intergenic | 70.0% | |
| TTCGGACTCGCCCACACGCC+AGG | + | chr5_4:64469135-64469154 | None:intergenic | 70.0% | |
| GGCGTGTGGGCGAGTCCGAA+TGG | - | chr5_4:64469135-64469154 | Msa0864230:intron | 70.0% | |
| CCGGAGGACAGAGACGCCTC+TGG | - | chr5_4:64472444-64472463 | Msa0864230:intron | 70.0% | |
| GGCGTAACCGGCTACGGCGG+TGG | + | chr5_4:64467125-64467144 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64466737 | 64473013 | 64466737 | ID=Msa0864230;Name=Msa0864230 |
| chr5_4 | mRNA | 64466737 | 64473013 | 64466737 | ID=Msa0864230-mRNA-1;Parent=Msa0864230;Name=Msa0864230-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.8|0.81|0.90|0.8|0.81|11|480|430 |
| chr5_4 | exon | 64466737 | 64467311 | 64466737 | ID=Msa0864230-mRNA-1:exon:20285;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64467436 | 64467449 | 64467436 | ID=Msa0864230-mRNA-1:exon:20284;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64467984 | 64468086 | 64467984 | ID=Msa0864230-mRNA-1:exon:20283;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64468197 | 64468356 | 64468197 | ID=Msa0864230-mRNA-1:exon:20282;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64468634 | 64468732 | 64468634 | ID=Msa0864230-mRNA-1:exon:20281;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64468828 | 64468932 | 64468828 | ID=Msa0864230-mRNA-1:exon:20280;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64469142 | 64469255 | 64469142 | ID=Msa0864230-mRNA-1:exon:20279;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64469365 | 64469426 | 64469365 | ID=Msa0864230-mRNA-1:exon:20278;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64470841 | 64470877 | 64470841 | ID=Msa0864230-mRNA-1:exon:20277;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64472365 | 64472453 | 64472365 | ID=Msa0864230-mRNA-1:exon:20276;Parent=Msa0864230-mRNA-1 |
| chr5_4 | exon | 64472599 | 64473013 | 64472599 | ID=Msa0864230-mRNA-1:exon:20275;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64472599 | 64473013 | 64472599 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64472365 | 64472453 | 64472365 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64470841 | 64470877 | 64470841 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64469365 | 64469426 | 64469365 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64469142 | 64469255 | 64469142 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64468828 | 64468932 | 64468828 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64468634 | 64468732 | 64468634 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64468197 | 64468356 | 64468197 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64467984 | 64468086 | 64467984 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64467436 | 64467449 | 64467436 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | CDS | 64467217 | 64467311 | 64467217 | ID=Msa0864230-mRNA-1:cds;Parent=Msa0864230-mRNA-1 |
| chr5_4 | three_prime_UTR | 64466737 | 64467216 | 64466737 | ID=Msa0864230-mRNA-1:three_prime_utr;Parent=Msa0864230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
