Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291960 | XP_003596202.1 | 93.494 | 415 | 0 | 1 | 1 | 388 | 1 | 415 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291960 | sp|Q9SEE9|SR45_ARATH | 70.968 | 186 | 39 | 5 | 69 | 248 | 94 | 270 | 5.96e-67 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291960 | G7IJA2 | 93.494 | 415 | 0 | 1 | 1 | 388 | 1 | 415 | 0.0 | 662 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0098390 | Msa0291960 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0139110 | Msa0291960 | 0.814143 | 1.789902e-51 | -8.615850e-47 |
| Msa0212750 | Msa0291960 | 0.874525 | 6.307882e-68 | -8.615850e-47 |
| Msa0252470 | Msa0291960 | 0.819315 | 1.238979e-52 | -8.615850e-47 |
| Msa0291960 | Msa0329930 | 0.947884 | 2.816400e-106 | -8.615850e-47 |
| Msa0291960 | Msa0525030 | 0.820724 | 5.896844e-53 | -8.615850e-47 |
| Msa0291960 | Msa0525060 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa0291960 | Msa0743920 | 0.816128 | 6.486746e-52 | -8.615850e-47 |
| Msa0291960 | Msa0747720 | 0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0291960 | Msa0748180 | 0.812648 | 3.813775e-51 | -8.615850e-47 |
| Msa0291960 | Msa0864230 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0291960 | Msa1036880 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0291960 | Msa1071040 | 0.844965 | 5.453008e-59 | -8.615850e-47 |
| Msa0291960 | Msa1118440 | 0.830894 | 2.270873e-55 | -8.615850e-47 |
| Msa0291960 | Msa1159030 | 0.853125 | 2.938737e-61 | -8.615850e-47 |
| Msa0291960 | Msa1279780 | 0.855182 | 7.491527e-62 | -8.615850e-47 |
| Msa0291960 | Msa1321190 | 0.859826 | 3.160779e-63 | -8.615850e-47 |
| Msa0291960 | Msa1321200 | 0.876124 | 1.790906e-68 | -8.615850e-47 |
| Msa0291960 | Msa1340560 | 0.876713 | 1.121826e-68 | -8.615850e-47 |
| Msa0291960 | Msa1428870 | 0.852743 | 3.778234e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291960 | MtrunA17_Chr2g0312111 | 93.494 | 415 | 0 | 1 | 1 | 388 | 1 | 415 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291960 | AT1G16610.7 | 70.968 | 186 | 39 | 5 | 69 | 248 | 94 | 270 | 3.19e-68 | 221 |
| Msa0291960 | AT1G16610.6 | 70.968 | 186 | 39 | 5 | 69 | 248 | 94 | 270 | 3.19e-68 | 221 |
| Msa0291960 | AT1G16610.1 | 70.968 | 186 | 39 | 5 | 69 | 248 | 94 | 270 | 6.06e-68 | 221 |
| Msa0291960 | AT1G16610.3 | 70.968 | 186 | 39 | 5 | 69 | 248 | 94 | 270 | 1.08e-67 | 220 |
| Msa0291960 | AT1G16610.4 | 64.550 | 189 | 39 | 5 | 69 | 248 | 94 | 263 | 1.90e-64 | 211 |
| Msa0291960 | AT1G16610.5 | 64.550 | 189 | 39 | 5 | 69 | 248 | 94 | 263 | 2.79e-64 | 210 |
| Msa0291960 | AT1G16610.2 | 64.550 | 189 | 39 | 5 | 69 | 248 | 94 | 263 | 2.88e-64 | 211 |
| Msa0291960 | AT2G27330.1 | 41.429 | 70 | 41 | 0 | 75 | 144 | 23 | 92 | 6.98e-11 | 59.7 |
Find 169 sgRNAs with CRISPR-Local
Find 601 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTGGAGCAACGGCTTT+TGG | 0.104945 | 2_3:+40677196 | None:intergenic |
| CTGTTCTGAAATACAAAATT+TGG | 0.127706 | 2_3:-40673525 | Msa0291960:three_prime_UTR |
| TAACGACATTGCCATCTATT+TGG | 0.147891 | 2_3:+40677263 | None:intergenic |
| ATATTGTAACATTACCTTCT+TGG | 0.222938 | 2_3:+40674880 | None:intergenic |
| TGCACATATCCATATCCTTT+TGG | 0.290998 | 2_3:+40677436 | None:intergenic |
| TCTATATTGATACATTTATC+AGG | 0.294206 | 2_3:-40673715 | Msa0291960:three_prime_UTR |
| CACTTTATTAATCTGCATTT+CGG | 0.305694 | 2_3:-40673563 | Msa0291960:three_prime_UTR |
| AACTTTGACAACAGGTTTCC+CGG | 0.310020 | 2_3:-40674921 | Msa0291960:intron |
| GAACGTCTCCGACCTGGGCC+TGG | 0.312796 | 2_3:+40676667 | None:intergenic |
| CCAACCTTGCAGGGGATCTA+AGG | 0.320903 | 2_3:+40676791 | None:intergenic |
| TGACAATTAGAATTGAATAT+TGG | 0.324828 | 2_3:-40673474 | Msa0291960:three_prime_UTR |
| GTCCTGGGTGCATCTCTCTT+TGG | 0.325028 | 2_3:+40677181 | None:intergenic |
| AACGACATTGCCATCTATTT+GGG | 0.327488 | 2_3:+40677264 | None:intergenic |
| GGTGGTGAAGCTTTCTGTCT+TGG | 0.334669 | 2_3:+40677220 | None:intergenic |
| GTTAATCTTCCAAAAGGATA+TGG | 0.336118 | 2_3:-40677445 | Msa0291960:CDS |
| CAGCAACGAGAAGTTATTCT+AGG | 0.342686 | 2_3:-40673683 | Msa0291960:three_prime_UTR |
| AGATATACAGGAATTATCTA+TGG | 0.347733 | 2_3:+40673744 | None:intergenic |
| TTATCTATGGTTTGCGAGCT+GGG | 0.348136 | 2_3:+40673757 | None:intergenic |
| TATTCTAGGTTAAGGTGTTA+AGG | 0.350082 | 2_3:-40673669 | Msa0291960:three_prime_UTR |
| GCACGGCGGCGAGGAGATTC+TGG | 0.350263 | 2_3:+40676934 | None:intergenic |
| TGCACCAGCATTATCAGTCC+TGG | 0.352961 | 2_3:+40677165 | None:intergenic |
| CGACCAACTGGAGATCTTCT+AGG | 0.356848 | 2_3:+40676490 | None:intergenic |
| TACTGAAAATTTCTTTCAAA+TGG | 0.360956 | 2_3:+40677968 | None:intergenic |
| ATACATTCTCTTGGACGCTT+TGG | 0.361966 | 2_3:+40677124 | None:intergenic |
| CAATCACAAGCCAACCTTGC+AGG | 0.362558 | 2_3:+40676781 | None:intergenic |
| AACGTCTCCGACCTGGGCCT+GGG | 0.369557 | 2_3:+40676668 | None:intergenic |
| GTTATGCAGGCCCAAATAGA+TGG | 0.379853 | 2_3:-40677274 | Msa0291960:intron |
| CGAGAAGTTATTCTAGGTTA+AGG | 0.387498 | 2_3:-40673677 | Msa0291960:three_prime_UTR |
| ATTCTAGGTTAAGGTGTTAA+GGG | 0.388222 | 2_3:-40673668 | Msa0291960:three_prime_UTR |
| TGTTCTGAAATACAAAATTT+GGG | 0.393205 | 2_3:-40673524 | Msa0291960:three_prime_UTR |
| ATATTTGTCGCATTTCTTCA+TGG | 0.399147 | 2_3:-40673645 | Msa0291960:three_prime_UTR |
| AGGACTACGGCTGCGGCTCT+TGG | 0.399262 | 2_3:+40680998 | None:intergenic |
| GAGTCTAATCGACGACGAAC+AGG | 0.399760 | 2_3:+40676904 | None:intergenic |
| AGATGGAGAACGACCTCTTC+CGG | 0.406473 | 2_3:+40676828 | None:intergenic |
| CTAGAATAACTTCTCGTTGC+TGG | 0.407571 | 2_3:+40673684 | None:intergenic |
| GATGGAGAACGACCTCTTCC+GGG | 0.414948 | 2_3:+40676829 | None:intergenic |
| CGACTACGCCTACGACCAAC+TGG | 0.415076 | 2_3:+40676478 | None:intergenic |
| ATTATCTATGGTTTGCGAGC+TGG | 0.416000 | 2_3:+40673756 | None:intergenic |
| GCGGCTCTTGGAACTGCGGG+AGG | 0.416414 | 2_3:+40681010 | None:intergenic |
| TATAGAGACATTAGATATAC+AGG | 0.418700 | 2_3:+40673732 | None:intergenic |
| GCGAGAGCGAGAAGATGAAC+GGG | 0.439194 | 2_3:+40681070 | None:intergenic |
| ATCAAGCATATACATTCTCT+TGG | 0.442317 | 2_3:+40677115 | None:intergenic |
| TCTCCTGTGCCTCGAAGAGC+TGG | 0.443695 | 2_3:-40676970 | Msa0291960:CDS |
| GATGACCTTCCCCGTCTCAT+AGG | 0.446050 | 2_3:+40675038 | None:intergenic |
| GGGGATCTAAGGCGCCTTGG+TGG | 0.449786 | 2_3:+40676802 | None:intergenic |
| TTCCAGGTTAATCTTCCAAA+AGG | 0.451700 | 2_3:-40677451 | Msa0291960:intron |
| CTACCAGCTAGGGTTTATCA+AGG | 0.457434 | 2_3:-40681193 | Msa0291960:five_prime_UTR |
| GGTGAAGCTTTCTGTCTTGG+AGG | 0.457477 | 2_3:+40677223 | None:intergenic |
| CCACAAACCTTGCGAGGACT+TGG | 0.458772 | 2_3:+40674999 | None:intergenic |
| CTTCTTCGTGGTGAGGGAGG+AGG | 0.460509 | 2_3:+40676994 | None:intergenic |
| GCTGCTGCTACTGTTGCTAC+TGG | 0.461792 | 2_3:+40673791 | None:intergenic |
| GATCTAAGGCGCCTTGGTGG+TGG | 0.462727 | 2_3:+40676805 | None:intergenic |
| AATAGATGGCAATGTCGTTA+AGG | 0.466748 | 2_3:-40677260 | Msa0291960:CDS |
| GGAGGAGAGAGAAGAAGATC+CGG | 0.467413 | 2_3:+40681097 | None:intergenic |
| AGAAGAGGAAGAGAAGGATC+TGG | 0.469316 | 2_3:+40681040 | None:intergenic |
| GACTGCGACTCTTAGATCTC+CGG | 0.473451 | 2_3:+40674902 | None:intergenic |
| GGGCTTCCACGCATCCTTCG+AGG | 0.473453 | 2_3:+40676688 | None:intergenic |
| GTGCAAATAATGTGTATGTT+TGG | 0.475339 | 2_3:-40673399 | Msa0291960:three_prime_UTR |
| TCTCCAGCTCCGCGACGATA+AGG | 0.476801 | 2_3:+40676880 | None:intergenic |
| CCACCGTCAGGTTCCGTCTC+CGG | 0.479517 | 2_3:-40681116 | Msa0291960:CDS |
| GAGGAGAACGTCTCCGACCT+GGG | 0.479737 | 2_3:+40676662 | None:intergenic |
| CGGCGTCTTGGAGGTGGAGG+AGG | 0.479817 | 2_3:+40676643 | None:intergenic |
| AAATATGGTTACCGGCGTCT+TGG | 0.480344 | 2_3:+40676631 | None:intergenic |
| TACCGGCGTCTTGGAGGTGG+AGG | 0.481771 | 2_3:+40676640 | None:intergenic |
| GGAAGAGAAGGATCTGGAAC+GGG | 0.482688 | 2_3:+40681046 | None:intergenic |
| GGTTACCGGCGTCTTGGAGG+TGG | 0.483481 | 2_3:+40676637 | None:intergenic |
| CGAAGGATGCGTGGAAGCCC+AGG | 0.486157 | 2_3:-40676685 | Msa0291960:CDS |
| TCTCCTTATCGTCGCGGAGC+TGG | 0.487612 | 2_3:-40676883 | Msa0291960:CDS |
| GCGAGAAGATGAACGGGAAG+AGG | 0.487908 | 2_3:+40681076 | None:intergenic |
| GATCCAGCTCTTCGAGGCAC+AGG | 0.490131 | 2_3:+40676967 | None:intergenic |
| AGGCGCCTTGGTGGTGGAGA+TGG | 0.493710 | 2_3:+40676811 | None:intergenic |
| GAGGAGGAGGACTACGGCTG+CGG | 0.496849 | 2_3:+40680991 | None:intergenic |
| GGAGGAGAACGTCTCCGACC+TGG | 0.497302 | 2_3:+40676661 | None:intergenic |
| CTCCTCCTCCCAGACGCAAA+AGG | 0.499052 | 2_3:-40680977 | Msa0291960:intron |
| CTTGGAGATCCAGCTCTTCG+AGG | 0.499074 | 2_3:+40676961 | None:intergenic |
| TGAGGTTGTAAGTGTGGAGT+TGG | 0.503187 | 2_3:-40677566 | Msa0291960:CDS |
| CGAGGAGATTCTGGTCGTCT+TGG | 0.503527 | 2_3:+40676943 | None:intergenic |
| CTACTGGCTCGTCCTTTCAA+AGG | 0.510729 | 2_3:+40673807 | None:intergenic |
| GCAGGGGATCTAAGGCGCCT+TGG | 0.514903 | 2_3:+40676799 | None:intergenic |
| CCAACACTTCACTACCAGCT+AGG | 0.517907 | 2_3:-40681204 | Msa0291960:five_prime_UTR |
| GCTCGTCGCTCACCACCGTC+AGG | 0.517992 | 2_3:-40681128 | Msa0291960:CDS |
| AGACCTGTGTCTCCCGGAAG+AGG | 0.518192 | 2_3:-40676841 | Msa0291960:CDS |
| AGGTCGACCACCTATGAGAC+GGG | 0.518809 | 2_3:-40675048 | Msa0291960:CDS |
| AACCCTTGATAAACCCTAGC+TGG | 0.519710 | 2_3:+40681190 | None:intergenic |
| TATGGTTACCGGCGTCTTGG+AGG | 0.521471 | 2_3:+40676634 | None:intergenic |
| TTCTAATTCAGGCCTTTGAA+AGG | 0.523052 | 2_3:-40673819 | Msa0291960:intron |
| GAGCGTGCAGATCTACGTAT+TGG | 0.523315 | 2_3:+40676451 | None:intergenic |
| GAGCTGGAGACACACCTCCT+AGG | 0.524184 | 2_3:-40676867 | Msa0291960:CDS |
| AATCACAAGCCAACCTTGCA+GGG | 0.524366 | 2_3:+40676782 | None:intergenic |
| TCTTCAACAATGGCGAAACC+TGG | 0.530578 | 2_3:-40681155 | Msa0291960:exon |
| ACGCTCTCTCTCTTCAACAA+TGG | 0.530762 | 2_3:-40681165 | Msa0291960:exon |
| TATCTATGGTTTGCGAGCTG+GGG | 0.531225 | 2_3:+40673758 | None:intergenic |
| CAACACTTCACTACCAGCTA+GGG | 0.532204 | 2_3:-40681203 | Msa0291960:five_prime_UTR |
| GGAGACACAGGTCTCCTCCT+AGG | 0.532924 | 2_3:+40676850 | None:intergenic |
| GCTGCGGCTCTTGGAACTGC+GGG | 0.533944 | 2_3:+40681007 | None:intergenic |
| TGTAAGTGTGGAGTTGGTGA+TGG | 0.534669 | 2_3:-40677560 | Msa0291960:CDS |
| CCTAGCTGGTAGTGAAGTGT+TGG | 0.534884 | 2_3:+40681204 | None:intergenic |
| AGGAGGAGACCTGTGTCTCC+CGG | 0.535300 | 2_3:-40676847 | Msa0291960:CDS |
| GAGATCTTCTAGGAGGACTA+CGG | 0.536211 | 2_3:+40676500 | None:intergenic |
| TGCATCTCTCTTTGGAGCAA+CGG | 0.537945 | 2_3:+40677189 | None:intergenic |
| GCACCAGCATTATCAGTCCT+GGG | 0.539187 | 2_3:+40677166 | None:intergenic |
| ACTGCGACTCTTAGATCTCC+GGG | 0.539264 | 2_3:+40674903 | None:intergenic |
| ATGCGTGGAAGCCCAGGCCC+AGG | 0.540597 | 2_3:-40676679 | Msa0291960:CDS |
| GGAGATCTTCTTCGTGGTGA+GGG | 0.542179 | 2_3:+40676988 | None:intergenic |
| CGACCTCTTCCGGGAGACAC+AGG | 0.544317 | 2_3:+40676838 | None:intergenic |
| AGCGAGAGCGAGAAGATGAA+CGG | 0.544443 | 2_3:+40681069 | None:intergenic |
| AGAGCGAGAAGAGGAAGAGA+AGG | 0.544660 | 2_3:+40681034 | None:intergenic |
| GAAATACAAAATTTGGGAGA+CGG | 0.545273 | 2_3:-40673518 | Msa0291960:three_prime_UTR |
| CTCAGCAGGAATGTCAATGA+AGG | 0.551796 | 2_3:-40677991 | Msa0291960:CDS |
| GGCACAGGAGATCTTCTTCG+TGG | 0.557413 | 2_3:+40676982 | None:intergenic |
| AGGAAGAGAAGGATCTGGAA+CGG | 0.560441 | 2_3:+40681045 | None:intergenic |
| AGAAGATGAACGGGAAGAGG+AGG | 0.561219 | 2_3:+40681079 | None:intergenic |
| GGAGAATCAGCACGGCGGCG+AGG | 0.563345 | 2_3:+40676925 | None:intergenic |
| ATCTATGGTTTGCGAGCTGG+GGG | 0.566966 | 2_3:+40673759 | None:intergenic |
| CGGCTCTTGGAACTGCGGGA+GGG | 0.567445 | 2_3:+40681011 | None:intergenic |
| TCAATTACATAGAACTCCAC+AGG | 0.569999 | 2_3:+40673432 | None:intergenic |
| CAAGATCATTCTCACCTCGC+AGG | 0.570160 | 2_3:-40676423 | Msa0291960:intron |
| AGAGACTCACGTACAGGAGA+AGG | 0.571962 | 2_3:+40678033 | None:intergenic |
| GGAGGACTACGGGCTCGTCT+AGG | 0.572276 | 2_3:+40676511 | None:intergenic |
| TGATTCGCCAAGTCCTCGCA+AGG | 0.582633 | 2_3:-40675006 | Msa0291960:intron |
| AGTGAAGTGTTGGATTTGTG+TGG | 0.583693 | 2_3:+40681214 | None:intergenic |
| TTTGTAGGGTATCACCTCGA+AGG | 0.583848 | 2_3:-40676702 | Msa0291960:intron |
| ATATTCAATTCTAATTGTCA+AGG | 0.587180 | 2_3:+40673477 | None:intergenic |
| GAGAGAAGAAGATCCGGAGA+CGG | 0.588697 | 2_3:+40681103 | None:intergenic |
| TCTAATTGTCAAGGTGCAAG+AGG | 0.589090 | 2_3:+40673486 | None:intergenic |
| GCGGGAGGGAGAGCGAGAAG+AGG | 0.591209 | 2_3:+40681025 | None:intergenic |
| GTCTGGGAGGAGGAGGACTA+CGG | 0.591874 | 2_3:+40680985 | None:intergenic |
| TCCACGTTGAGAAACTCAGC+AGG | 0.592519 | 2_3:-40678005 | Msa0291960:CDS |
| TCATGATACCAGCTTCTCCT+CGG | 0.592855 | 2_3:-40677023 | Msa0291960:intron |
| GACCTTCCCCGTCTCATAGG+TGG | 0.593756 | 2_3:+40675041 | None:intergenic |
| GGCTGCGGCTCTTGGAACTG+CGG | 0.594222 | 2_3:+40681006 | None:intergenic |
| AGATCTTCTAGGAGGACTAC+GGG | 0.597672 | 2_3:+40676501 | None:intergenic |
| CTCCAAAGAGAGATGCACCC+AGG | 0.599492 | 2_3:-40677183 | Msa0291960:CDS |
| GGTGAGCGACGAGCTCGACC+AGG | 0.600587 | 2_3:+40681137 | None:intergenic |
| CTAAGAGTCGCAGTCCAAGA+AGG | 0.604040 | 2_3:-40674894 | Msa0291960:intron |
| TATGTGCATTTCAAGACAAG+AGG | 0.604823 | 2_3:-40677421 | Msa0291960:CDS |
| ATGTGCATTTCAAGACAAGA+GGG | 0.604946 | 2_3:-40677420 | Msa0291960:CDS |
| AGGAGATCTTCTTCGTGGTG+AGG | 0.605078 | 2_3:+40676987 | None:intergenic |
| GATCTTCTTCGTGGTGAGGG+AGG | 0.605783 | 2_3:+40676991 | None:intergenic |
| AGAACAAGAGACTCACGTAC+AGG | 0.608107 | 2_3:+40678027 | None:intergenic |
| GGACTACGGGCTCGTCTAGG+AGG | 0.608691 | 2_3:+40676514 | None:intergenic |
| CTCCTCCACCTCCAAGACGC+CGG | 0.615673 | 2_3:-40676642 | Msa0291960:intron |
| GAGGTCGACCACCTATGAGA+CGG | 0.620002 | 2_3:-40675049 | Msa0291960:CDS |
| TACCAGCTAGGGTTTATCAA+GGG | 0.620122 | 2_3:-40681192 | Msa0291960:five_prime_UTR |
| TAAAAGCCACAAACCTTGCG+AGG | 0.621764 | 2_3:+40674993 | None:intergenic |
| GAAGATCTCCAGTTGGTCGT+AGG | 0.622724 | 2_3:-40676486 | Msa0291960:CDS |
| GTATCACCTCGAAGGATGCG+TGG | 0.627633 | 2_3:-40676694 | Msa0291960:CDS |
| AATCTCTTCTAGAAATCCTG+TGG | 0.631584 | 2_3:-40673448 | Msa0291960:three_prime_UTR |
| AATAATGTGTATGTTTGGTG+TGG | 0.635683 | 2_3:-40673394 | Msa0291960:three_prime_UTR |
| AAAGCATTATTGTACATGGA+TGG | 0.635945 | 2_3:-40677388 | Msa0291960:CDS |
| GACGAACAGGAGAATCAGCA+CGG | 0.638925 | 2_3:+40676917 | None:intergenic |
| ATCACAAGCCAACCTTGCAG+GGG | 0.648854 | 2_3:+40676783 | None:intergenic |
| GGCGCCTTAGATCCCCTGCA+AGG | 0.649935 | 2_3:-40676795 | Msa0291960:intron |
| CTGGAGACACACCTCCTAGG+AGG | 0.651015 | 2_3:-40676864 | Msa0291960:CDS |
| GCACCCAGGACTGATAATGC+TGG | 0.653333 | 2_3:-40677169 | Msa0291960:CDS |
| GACACAGGTCTCCTCCTAGG+AGG | 0.659461 | 2_3:+40676853 | None:intergenic |
| TGTGTGGAGTGAGTGAATCG+AGG | 0.659565 | 2_3:+40681230 | None:intergenic |
| GATCCGGAGACGGAACCTGA+CGG | 0.662551 | 2_3:+40681113 | None:intergenic |
| TCCTGCTGAGTTTCTCAACG+TGG | 0.664278 | 2_3:+40678004 | None:intergenic |
| GTGGAAGCCCAGGCCCAGGT+CGG | 0.673944 | 2_3:-40676675 | Msa0291960:CDS |
| CCTCCTAGAAGATCTCCAGT+TGG | 0.674715 | 2_3:-40676493 | Msa0291960:CDS |
| GTTCTCCATCTCCACCACCA+AGG | 0.678815 | 2_3:-40676816 | Msa0291960:CDS |
| GACCACCTATGAGACGGGGA+AGG | 0.682622 | 2_3:-40675043 | Msa0291960:CDS |
| TTAGACTCTCCTTATCGTCG+CGG | 0.699428 | 2_3:-40676889 | Msa0291960:CDS |
| CCGGAGACGGAACCTGACGG+TGG | 0.710125 | 2_3:+40681116 | None:intergenic |
| CCAACTGGAGATCTTCTAGG+AGG | 0.711269 | 2_3:+40676493 | None:intergenic |
| TGTGCATTTCAAGACAAGAG+GGG | 0.715976 | 2_3:-40677419 | Msa0291960:CDS |
| GGTCGACCACCTATGAGACG+GGG | 0.736141 | 2_3:-40675047 | Msa0291960:CDS |
| GAACAGGAGAATCAGCACGG+CGG | 0.755780 | 2_3:+40676920 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTGAATTTTCATTA+AGG | - | chr2_3:40673877-40673896 | Msa0291960:intron | 10.0% |
| !! | TTGATTATAGTATAAAAAAA+TGG | - | chr2_3:40674130-40674149 | Msa0291960:intron | 10.0% |
| !!! | TATTCAGTATTTTAAAAATT+GGG | + | chr2_3:40676404-40676423 | None:intergenic | 10.0% |
| !!! | ATATTCAGTATTTTAAAAAT+TGG | + | chr2_3:40676405-40676424 | None:intergenic | 10.0% |
| !!! | TTGTTTTATATTTATCATAT+TGG | - | chr2_3:40677568-40677587 | Msa0291960:CDS | 10.0% |
| !!! | ATAATTTTATCTTTAAATTC+TGG | - | chr2_3:40678771-40678790 | Msa0291960:intron | 10.0% |
| !!! | TGTTATTATTTTTATTTGTT+TGG | - | chr2_3:40679819-40679838 | Msa0291960:intron | 10.0% |
| !! | ATAAACAAGTTAAAAAAATA+CGG | + | chr2_3:40680078-40680097 | None:intergenic | 10.0% |
| !!! | TCATTTCATTATATTTTTAA+AGG | + | chr2_3:40680187-40680206 | None:intergenic | 10.0% |
| !!! | AATTTCGTTTTTATTTTTGT+TGG | - | chr2_3:40673834-40673853 | Msa0291960:intron | 15.0% |
| !!! | ATTTCGTTTTTATTTTTGTT+GGG | - | chr2_3:40673835-40673854 | Msa0291960:intron | 15.0% |
| !! | ATTATAGTATAAAAAAATGG+TGG | - | chr2_3:40674133-40674152 | Msa0291960:intron | 15.0% |
| !!! | ACTTTATAAATTAGTTTTGT+GGG | - | chr2_3:40675415-40675434 | Msa0291960:intron | 15.0% |
| !!! | TAAAATGTTTATTTGGTTTT+TGG | + | chr2_3:40675892-40675911 | None:intergenic | 15.0% |
| !! | TGTATTGTAAAATGTTTATT+TGG | + | chr2_3:40675899-40675918 | None:intergenic | 15.0% |
| !! | TAAGTATTCATATTATTAAC+TGG | - | chr2_3:40676883-40676902 | Msa0291960:CDS | 15.0% |
| !! | AAGTATTCATATTATTAACT+GGG | - | chr2_3:40676884-40676903 | Msa0291960:CDS | 15.0% |
| !!! | TTTTATATTTATCATATTGG+TGG | - | chr2_3:40677571-40677590 | Msa0291960:CDS | 15.0% |
| !!! | GATTAATTTTCATTTTTGTA+GGG | - | chr2_3:40677928-40677947 | Msa0291960:intron | 15.0% |
| !!! | TTTTGTGCATAATATTATTT+TGG | - | chr2_3:40678305-40678324 | Msa0291960:intron | 15.0% |
| !!! | TTTGTGCATAATATTATTTT+GGG | - | chr2_3:40678306-40678325 | Msa0291960:intron | 15.0% |
| !! | AAAAAAAAAAACTAGCAATA+GGG | - | chr2_3:40678482-40678501 | Msa0291960:intron | 15.0% |
| !!! | GAATTTTGTTTAATAATGTT+AGG | + | chr2_3:40678588-40678607 | None:intergenic | 15.0% |
| !! | TTTATTCATTGAGAATTTAA+GGG | - | chr2_3:40679024-40679043 | Msa0291960:intron | 15.0% |
| !!! | TTTTTTACGTGATATAATAA+TGG | - | chr2_3:40679321-40679340 | Msa0291960:intron | 15.0% |
| !!! | AGAAACAAGATTTTTTTTTA+AGG | + | chr2_3:40679392-40679411 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATCTTGTTTCTT+AGG | - | chr2_3:40679393-40679412 | Msa0291960:intron | 15.0% |
| !! | TGTTACAATATTTGATATAA+TGG | - | chr2_3:40679776-40679795 | Msa0291960:intron | 15.0% |
| !!! | TTGAATTTTCATTAAGGTTT+AGG | - | chr2_3:40673883-40673902 | Msa0291960:intron | 20.0% |
| !!! | AAAGTATAAGAGAAACTTTT+AGG | - | chr2_3:40674269-40674288 | Msa0291960:intron | 20.0% |
| !! | AGATAGATCTTATAAAACTT+AGG | - | chr2_3:40675176-40675195 | Msa0291960:intron | 20.0% |
| !!! | AAGATACCATCTTAAATTTT+GGG | + | chr2_3:40675248-40675267 | None:intergenic | 20.0% |
| !!! | TAAGATACCATCTTAAATTT+TGG | + | chr2_3:40675249-40675268 | None:intergenic | 20.0% |
| !! | CAAAACTAATTTATAAAGTG+CGG | + | chr2_3:40675414-40675433 | None:intergenic | 20.0% |
| !!! | CACTTTATAAATTAGTTTTG+TGG | - | chr2_3:40675414-40675433 | Msa0291960:intron | 20.0% |
| !!! | CTTTATAAATTAGTTTTGTG+GGG | - | chr2_3:40675416-40675435 | Msa0291960:intron | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | - | chr2_3:40675763-40675782 | Msa0291960:intron | 20.0% |
| !!! | TTTATTTGGTTTTTGGAAAT+TGG | + | chr2_3:40675885-40675904 | None:intergenic | 20.0% |
| !! | CAATTGAAATCCAAAAAAAA+AGG | - | chr2_3:40675917-40675936 | Msa0291960:intron | 20.0% |
| !!! | TGTTTTTATAATTTTCAGTG+CGG | - | chr2_3:40676439-40676458 | Msa0291960:CDS | 20.0% |
| !! | TACTGAAAATTTCTTTCAAA+TGG | + | chr2_3:40676679-40676698 | None:intergenic | 20.0% |
| !! | CTGTAAGTTTACATTTAATT+TGG | - | chr2_3:40677113-40677132 | Msa0291960:intron | 20.0% |
| !! | CATAACAAAAAAAACAACAA+AGG | + | chr2_3:40677356-40677375 | None:intergenic | 20.0% |
| !! | AAAATGAAAATTAATCGAGT+CGG | + | chr2_3:40677924-40677943 | None:intergenic | 20.0% |
| !!! | CGATTAATTTTCATTTTTGT+AGG | - | chr2_3:40677927-40677946 | Msa0291960:intron | 20.0% |
| !! | AAATTGAAAAACAATAATCG+AGG | + | chr2_3:40678053-40678072 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAAACTAGCAAT+AGG | - | chr2_3:40678481-40678500 | Msa0291960:intron | 20.0% |
| !! | TTAATAATGTTAGGCTTAAT+TGG | + | chr2_3:40678579-40678598 | None:intergenic | 20.0% |
| !! | TAAACAAAATTCTTCATTGA+TGG | - | chr2_3:40678596-40678615 | Msa0291960:intron | 20.0% |
| !! | TTAACTAAAAACATGTTGAA+GGG | + | chr2_3:40678653-40678672 | None:intergenic | 20.0% |
| !! | ATTAACTAAAAACATGTTGA+AGG | + | chr2_3:40678654-40678673 | None:intergenic | 20.0% |
| !!! | TTTCTAGTGTTATGATTAAT+AGG | + | chr2_3:40678678-40678697 | None:intergenic | 20.0% |
| !! | AAATTATGAGAATGAATTCT+AGG | + | chr2_3:40678758-40678777 | None:intergenic | 20.0% |
| !! | TAAATAATTCACTGTTCTAT+GGG | - | chr2_3:40678891-40678910 | Msa0291960:intron | 20.0% |
| !!! | CATGTTTGTTTGTATTTTAA+CGG | - | chr2_3:40678973-40678992 | Msa0291960:intron | 20.0% |
| !! | GTTTATTCATTGAGAATTTA+AGG | - | chr2_3:40679023-40679042 | Msa0291960:intron | 20.0% |
| !!! | ACTGTCTATTTTAAAAATAG+AGG | - | chr2_3:40679052-40679071 | Msa0291960:intron | 20.0% |
| !!! | CTGTCTATTTTAAAAATAGA+GGG | - | chr2_3:40679053-40679072 | Msa0291960:intron | 20.0% |
| !!! | TGTCTATTTTAAAAATAGAG+GGG | - | chr2_3:40679054-40679073 | Msa0291960:intron | 20.0% |
| !! | ATGCTTCTATCAAAATAATA+GGG | + | chr2_3:40679127-40679146 | None:intergenic | 20.0% |
| !! | TATGCTTCTATCAAAATAAT+AGG | + | chr2_3:40679128-40679147 | None:intergenic | 20.0% |
| !! | TTAATTGATGCTTATTATGT+AGG | - | chr2_3:40679269-40679288 | Msa0291960:intron | 20.0% |
| !! | GTATTAAAACTTTGCATTTA+TGG | + | chr2_3:40679479-40679498 | None:intergenic | 20.0% |
| !!! | TCAATAAGTAAATTTTACCT+AGG | + | chr2_3:40679573-40679592 | None:intergenic | 20.0% |
| !! | TAAAATTTACTTATTGACAG+AGG | - | chr2_3:40679576-40679595 | Msa0291960:intron | 20.0% |
| !!! | GTATATGTCATTATTTTACA+TGG | - | chr2_3:40679680-40679699 | Msa0291960:intron | 20.0% |
| !!! | AACAGATTAGATTTTAAGAA+TGG | - | chr2_3:40680540-40680559 | Msa0291960:intron | 20.0% |
| !!! | ATATTTTAATTGGTGGTATA+AGG | + | chr2_3:40680602-40680621 | None:intergenic | 20.0% |
| !!! | CATTTGTACATTTTCATTAA+AGG | - | chr2_3:40680642-40680661 | Msa0291960:intron | 20.0% |
| !! | TCTATATTGATACATTTATC+AGG | - | chr2_3:40680929-40680948 | Msa0291960:intron | 20.0% |
| !!! | TGTTCTGAAATACAAAATTT+GGG | - | chr2_3:40681120-40681139 | Msa0291960:CDS | 20.0% |
| !! | ATATTCAATTCTAATTGTCA+AGG | + | chr2_3:40681170-40681189 | None:intergenic | 20.0% |
| !! | TGACAATTAGAATTGAATAT+TGG | - | chr2_3:40681170-40681189 | Msa0291960:five_prime_UTR | 20.0% |
| ! | AAGAATTAAAGTTGAATCGA+AGG | + | chr2_3:40673702-40673721 | None:intergenic | 25.0% |
| ! | AGTAAAACATCAAATTGACT+AGG | + | chr2_3:40673762-40673781 | None:intergenic | 25.0% |
| !!! | TAAGGTTTAGGTTTTCAATT+AGG | - | chr2_3:40673895-40673914 | Msa0291960:intron | 25.0% |
| !!! | AAGGTTTAGGTTTTCAATTA+GGG | - | chr2_3:40673896-40673915 | Msa0291960:intron | 25.0% |
| !! | GGAAATTTGAAATGGAAATT+TGG | - | chr2_3:40673918-40673937 | Msa0291960:intron | 25.0% |
| !!! | ATTTGGTTAGTTTTATGTCT+TGG | - | chr2_3:40673935-40673954 | Msa0291960:intron | 25.0% |
| ! | AGCTCCTTAAACATTAATTT+CGG | + | chr2_3:40673961-40673980 | None:intergenic | 25.0% |
| ! | AAACAACGATATAATGTAGA+CGG | + | chr2_3:40674032-40674051 | None:intergenic | 25.0% |
| !!! | TGCAAAAATCAGATTTGTTT+TGG | - | chr2_3:40674064-40674083 | Msa0291960:intron | 25.0% |
| !!! | TGTTTTGGTTCAATAATTTG+TGG | - | chr2_3:40674079-40674098 | Msa0291960:intron | 25.0% |
| !!! | GTTTTGGTTCAATAATTTGT+GGG | - | chr2_3:40674080-40674099 | Msa0291960:intron | 25.0% |
| !!! | GTTTCTCTTATACTTTTTCT+AGG | + | chr2_3:40674265-40674284 | None:intergenic | 25.0% |
| !!! | AACTTTTAGGAAAGATTTAG+AGG | - | chr2_3:40674282-40674301 | Msa0291960:intron | 25.0% |
| ! | AAATTACTACCATATCAATC+TGG | + | chr2_3:40674408-40674427 | None:intergenic | 25.0% |
| !! | ATTTGAAATGAGTTTACCTT+GGG | + | chr2_3:40674523-40674542 | None:intergenic | 25.0% |
| !! | AATTTGAAATGAGTTTACCT+TGG | + | chr2_3:40674524-40674543 | None:intergenic | 25.0% |
| !!! | AAGAAGTGTCGTATAAAAAA+GGG | + | chr2_3:40674558-40674577 | None:intergenic | 25.0% |
| !! | TTTTATATGCCATATCTTGA+CGG | - | chr2_3:40674633-40674652 | Msa0291960:intron | 25.0% |
| ! | TAACAGTTGACAATATAAGT+TGG | + | chr2_3:40674780-40674799 | None:intergenic | 25.0% |
| ! | CTTACATATATCACTTTAGT+CGG | + | chr2_3:40674830-40674849 | None:intergenic | 25.0% |
| ! | CTAAAGTGATATATGTAAGA+TGG | - | chr2_3:40674831-40674850 | Msa0291960:intron | 25.0% |
| ! | TTGAATGTAATTATAGACGA+AGG | - | chr2_3:40675087-40675106 | Msa0291960:intron | 25.0% |
| ! | TGAATGTAATTATAGACGAA+GGG | - | chr2_3:40675088-40675107 | Msa0291960:intron | 25.0% |
| ! | AATTTGCCCAAAATTTAAGA+TGG | - | chr2_3:40675239-40675258 | Msa0291960:intron | 25.0% |
| ! | TATATGATAGAACATTATGG+CGG | - | chr2_3:40675766-40675785 | Msa0291960:intron | 25.0% |
| ! | TATAAGTTATCACACTAAGT+GGG | + | chr2_3:40675813-40675832 | None:intergenic | 25.0% |
| ! | TTATAAGTTATCACACTAAG+TGG | + | chr2_3:40675814-40675833 | None:intergenic | 25.0% |
| ! | ACTTAGTGTGATAACTTATA+AGG | - | chr2_3:40675813-40675832 | Msa0291960:intron | 25.0% |
| !!! | TTCATCATATCTTTAAGATG+TGG | - | chr2_3:40676468-40676487 | Msa0291960:CDS | 25.0% |
| ! | AGAAACAGAAAAATTGCATT+GGG | + | chr2_3:40676802-40676821 | None:intergenic | 25.0% |
| ! | AAGAAACAGAAAAATTGCAT+TGG | + | chr2_3:40676803-40676822 | None:intergenic | 25.0% |
| !! | TTTCTTTTCAAAAACTTTCC+AGG | - | chr2_3:40677177-40677196 | Msa0291960:CDS | 25.0% |
| !!! | TGAAAAAGCATTATTGTACA+TGG | - | chr2_3:40677252-40677271 | Msa0291960:CDS | 25.0% |
| !!! | TGTTGTTTTTTTTGTTATGC+AGG | - | chr2_3:40677357-40677376 | Msa0291960:intron | 25.0% |
| ! | GAAAATAAGCACTCAAAATA+TGG | + | chr2_3:40678031-40678050 | None:intergenic | 25.0% |
| ! | TAACTAAAAACATGTTGAAG+GGG | + | chr2_3:40678652-40678671 | None:intergenic | 25.0% |
| ! | GTAAATAATTCACTGTTCTA+TGG | - | chr2_3:40678890-40678909 | Msa0291960:intron | 25.0% |
| ! | TTCATAGGAAATCAATTGAA+TGG | - | chr2_3:40678925-40678944 | Msa0291960:intron | 25.0% |
| !!! | GTCTATTTTAAAAATAGAGG+GGG | - | chr2_3:40679055-40679074 | Msa0291960:intron | 25.0% |
| !! | ATGTCATTTAAAGAAAACTC+AGG | - | chr2_3:40679083-40679102 | Msa0291960:intron | 25.0% |
| ! | CATCAATTAAATCTTCACTA+AGG | + | chr2_3:40679259-40679278 | None:intergenic | 25.0% |
| ! | ATATTGTAACATTACCTTCT+TGG | + | chr2_3:40679767-40679786 | None:intergenic | 25.0% |
| ! | GTCAGAAGTAACTAATAAAA+AGG | + | chr2_3:40680042-40680061 | None:intergenic | 25.0% |
| !!! | TTGTTTTGAAGAATTTCTAC+TGG | - | chr2_3:40680143-40680162 | Msa0291960:intron | 25.0% |
| !!! | GAACAAGGGTATATTTTAAT+TGG | + | chr2_3:40680612-40680631 | None:intergenic | 25.0% |
| !!! | CGTTGTTTCTTTCAATTTTA+TGG | - | chr2_3:40680753-40680772 | Msa0291960:intron | 25.0% |
| ! | AGATATACAGGAATTATCTA+TGG | + | chr2_3:40680903-40680922 | None:intergenic | 25.0% |
| ! | TATAGAGACATTAGATATAC+AGG | + | chr2_3:40680915-40680934 | None:intergenic | 25.0% |
| ! | CACTTTATTAATCTGCATTT+CGG | - | chr2_3:40681081-40681100 | Msa0291960:CDS | 25.0% |
| !!! | CTGTTCTGAAATACAAAATT+TGG | - | chr2_3:40681119-40681138 | Msa0291960:CDS | 25.0% |
| ATTAAAGTTGAATCGAAGGA+TGG | + | chr2_3:40673698-40673717 | None:intergenic | 30.0% | |
| GGTTCAAAATTTCAACGATT+TGG | + | chr2_3:40673726-40673745 | None:intergenic | 30.0% | |
| ! | TTGAAATTTTGAACCGTTAG+AGG | - | chr2_3:40673731-40673750 | Msa0291960:three_prime_UTR | 30.0% |
| !! | AGGTTTAGGTTTTCAATTAG+GGG | - | chr2_3:40673897-40673916 | Msa0291960:intron | 30.0% |
| CAATTAGGGGAAATTTGAAA+TGG | - | chr2_3:40673910-40673929 | Msa0291960:intron | 30.0% | |
| TTGGCCGAAATTAATGTTTA+AGG | - | chr2_3:40673954-40673973 | Msa0291960:intron | 30.0% | |
| ATATTTAGCATAGGAATCAC+AGG | + | chr2_3:40674002-40674021 | None:intergenic | 30.0% | |
| TGTGATTCCTATGCTAAATA+TGG | - | chr2_3:40674001-40674020 | Msa0291960:intron | 30.0% | |
| GGATTAACCATATTTAGCAT+AGG | + | chr2_3:40674011-40674030 | None:intergenic | 30.0% | |
| ATGTTCTATCACAGCATATT+TGG | + | chr2_3:40674322-40674341 | None:intergenic | 30.0% | |
| ! | TGCCATAATTTTATCCATGT+TGG | - | chr2_3:40674344-40674363 | Msa0291960:intron | 30.0% |
| ! | GCCATAATTTTATCCATGTT+GGG | - | chr2_3:40674345-40674364 | Msa0291960:intron | 30.0% |
| TCCCAACATGGATAAAATTA+TGG | + | chr2_3:40674349-40674368 | None:intergenic | 30.0% | |
| ! | ATTTTATCCATGTTGGGATA+AGG | - | chr2_3:40674351-40674370 | Msa0291960:intron | 30.0% |
| ! | TTTGAAATGAGTTTACCTTG+GGG | + | chr2_3:40674522-40674541 | None:intergenic | 30.0% |
| !! | CAAGAAGTGTCGTATAAAAA+AGG | + | chr2_3:40674559-40674578 | None:intergenic | 30.0% |
| TAACAGTCTACTATATGTTG+AGG | - | chr2_3:40674798-40674817 | Msa0291960:intron | 30.0% | |
| TTGTATATAATGCATATCCC+TGG | + | chr2_3:40674857-40674876 | None:intergenic | 30.0% | |
| AGGGATATGCATTATATACA+AGG | - | chr2_3:40674856-40674875 | Msa0291960:intron | 30.0% | |
| TCAAAATTGAGATTCTGCAT+AGG | - | chr2_3:40674882-40674901 | Msa0291960:intron | 30.0% | |
| ACATGTTAGCAAGAGATATA+AGG | - | chr2_3:40675150-40675169 | Msa0291960:intron | 30.0% | |
| !!! | CACTTATTTTAATCTCGTGT+TGG | + | chr2_3:40675468-40675487 | None:intergenic | 30.0% |
| CGAGATTAAAATAAGTGTAG+CGG | - | chr2_3:40675471-40675490 | Msa0291960:intron | 30.0% | |
| TCTACCATCTATTCTACAAT+AGG | + | chr2_3:40675589-40675608 | None:intergenic | 30.0% | |
| GTTGCTCTTATAGTATTTCT+TGG | + | chr2_3:40675702-40675721 | None:intergenic | 30.0% | |
| TATAAGAGCAACTACTAAGA+AGG | - | chr2_3:40675710-40675729 | Msa0291960:intron | 30.0% | |
| ATAAGTTATCACACTAAGTG+GGG | + | chr2_3:40675812-40675831 | None:intergenic | 30.0% | |
| ! | ATAACTTATAAGGCTTGCTT+GGG | - | chr2_3:40675823-40675842 | Msa0291960:intron | 30.0% |
| CTATGCACAAACACTAATTT+GGG | + | chr2_3:40676273-40676292 | None:intergenic | 30.0% | |
| ! | TAGTAGCTTGTATGTGTAAT+TGG | - | chr2_3:40676979-40676998 | Msa0291960:CDS | 30.0% |
| TTAGTGACCCTTATATCTTA+AGG | - | chr2_3:40677012-40677031 | Msa0291960:CDS | 30.0% | |
| ATGAGCTCCTTAAGATATAA+GGG | + | chr2_3:40677022-40677041 | None:intergenic | 30.0% | |
| TATGAGCTCCTTAAGATATA+AGG | + | chr2_3:40677023-40677042 | None:intergenic | 30.0% | |
| ! | CTAGAAGAATTTAGAGTTGT+AGG | - | chr2_3:40677146-40677165 | Msa0291960:CDS | 30.0% |
| GTTAATCTTCCAAAAGGATA+TGG | - | chr2_3:40677199-40677218 | Msa0291960:CDS | 30.0% | |
| ! | AAAGCATTATTGTACATGGA+TGG | - | chr2_3:40677256-40677275 | Msa0291960:CDS | 30.0% |
| TTGTGGAAATTAATCCAACT+CGG | + | chr2_3:40677298-40677317 | None:intergenic | 30.0% | |
| ATCAAGCATATACATTCTCT+TGG | + | chr2_3:40677532-40677551 | None:intergenic | 30.0% | |
| !! | CATATTGGTGGTTTTCATAT+TGG | - | chr2_3:40677583-40677602 | Msa0291960:intron | 30.0% |
| ! | TTTTTCCAATGAGCAATCAA+TGG | + | chr2_3:40678089-40678108 | None:intergenic | 30.0% |
| ! | TGTCATTTAACTGAACCTTA+GGG | + | chr2_3:40678349-40678368 | None:intergenic | 30.0% |
| AGTTAACAGAGTTAGATTGA+GGG | + | chr2_3:40678409-40678428 | None:intergenic | 30.0% | |
| TAGTTAACAGAGTTAGATTG+AGG | + | chr2_3:40678410-40678429 | None:intergenic | 30.0% | |
| AATTCCAATCTCGAAACTTA+TGG | - | chr2_3:40678532-40678551 | Msa0291960:intron | 30.0% | |
| !! | GGAAGGTATATGTATTTTGA+GGG | + | chr2_3:40678720-40678739 | None:intergenic | 30.0% |
| !! | AGGAAGGTATATGTATTTTG+AGG | + | chr2_3:40678721-40678740 | None:intergenic | 30.0% |
| ! | TCTAGGACAAGGAAAAATAT+AGG | + | chr2_3:40678741-40678760 | None:intergenic | 30.0% |
| ! | ATTGAAGTTTTCACCATCTT+TGG | + | chr2_3:40678951-40678970 | None:intergenic | 30.0% |
| !!! | GTATTTTAACGGAGAGATAA+CGG | - | chr2_3:40678984-40679003 | Msa0291960:intron | 30.0% |
| ATTCATTGAGAATTTAAGGG+AGG | - | chr2_3:40679027-40679046 | Msa0291960:intron | 30.0% | |
| ATTTAAAGAAAACTCAGGAG+AGG | - | chr2_3:40679088-40679107 | Msa0291960:intron | 30.0% | |
| ! | AGAAGCATAAAATAAAGCGT+TGG | - | chr2_3:40679139-40679158 | Msa0291960:intron | 30.0% |
| ! | TTCAAGGGAATGTCAAATTT+TGG | + | chr2_3:40679220-40679239 | None:intergenic | 30.0% |
| AAATTTGACATTCCCTTGAA+TGG | - | chr2_3:40679220-40679239 | Msa0291960:intron | 30.0% | |
| TATAATAATGGCAGAAGAGT+TGG | - | chr2_3:40679333-40679352 | Msa0291960:intron | 30.0% | |
| ATAATAATGGCAGAAGAGTT+GGG | - | chr2_3:40679334-40679353 | Msa0291960:intron | 30.0% | |
| ! | ATCTTGTTTCTTAGGAATCA+AGG | - | chr2_3:40679364-40679383 | Msa0291960:intron | 30.0% |
| ACATTCATAACTTTGACAAC+AGG | - | chr2_3:40679715-40679734 | Msa0291960:intron | 30.0% | |
| AAGCAGAATAGAAGAAAAGA+TGG | + | chr2_3:40679857-40679876 | None:intergenic | 30.0% | |
| GCTACTTGACCAAAAAAAAA+AGG | + | chr2_3:40679893-40679912 | None:intergenic | 30.0% | |
| !! | CTTTTTCATGGTGAATAAGT+GGG | - | chr2_3:40679931-40679950 | Msa0291960:intron | 30.0% |
| ! | TTTTTCATGGTGAATAAGTG+GGG | - | chr2_3:40679932-40679951 | Msa0291960:intron | 30.0% |
| ! | AGTAACTAATAAAAAGGCAC+CGG | + | chr2_3:40680036-40680055 | None:intergenic | 30.0% |
| ! | TCTTATCATGATCTTGTTTG+AGG | + | chr2_3:40680117-40680136 | None:intergenic | 30.0% |
| AACATTGAAACACCAAAGTT+AGG | + | chr2_3:40680327-40680346 | None:intergenic | 30.0% | |
| AAGTAGATGTTCATATGCTT+AGG | - | chr2_3:40680373-40680392 | Msa0291960:intron | 30.0% | |
| AGAATGTCATTCAAAAACCA+TGG | + | chr2_3:40680454-40680473 | None:intergenic | 30.0% | |
| !! | TTTTAATTGGTGGTATAAGG+TGG | + | chr2_3:40680599-40680618 | None:intergenic | 30.0% |
| !!! | CAAGGGTATATTTTAATTGG+TGG | + | chr2_3:40680609-40680628 | None:intergenic | 30.0% |
| ! | TATGATCTGCATCTTCATTT+TGG | - | chr2_3:40680779-40680798 | Msa0291960:intron | 30.0% |
| ! | TATTCTAGGTTAAGGTGTTA+AGG | - | chr2_3:40680975-40680994 | Msa0291960:intron | 30.0% |
| ! | ATTCTAGGTTAAGGTGTTAA+GGG | - | chr2_3:40680976-40680995 | Msa0291960:intron | 30.0% |
| ATATTTGTCGCATTTCTTCA+TGG | - | chr2_3:40680999-40681018 | Msa0291960:CDS | 30.0% | |
| GAAATACAAAATTTGGGAGA+CGG | - | chr2_3:40681126-40681145 | Msa0291960:CDS | 30.0% | |
| GTGCAAATAATGTGTATGTT+TGG | - | chr2_3:40681245-40681264 | Msa0291960:five_prime_UTR | 30.0% | |
| ! | TGACTAGGATTTTCCTCTAA+CGG | + | chr2_3:40673747-40673766 | None:intergenic | 35.0% |
| ! | GGGAGTAATTTTCATTTTGC+TGG | - | chr2_3:40674100-40674119 | Msa0291960:intron | 35.0% |
| ! | AAAATGGTGGAAACTAGACT+TGG | - | chr2_3:40674146-40674165 | Msa0291960:intron | 35.0% |
| ! | AAATGGTGGAAACTAGACTT+GGG | - | chr2_3:40674147-40674166 | Msa0291960:intron | 35.0% |
| !!! | AGCCTGTTGATTTTGTAGTA+AGG | - | chr2_3:40674192-40674211 | Msa0291960:intron | 35.0% |
| CTCCTTACTACAAAATCAAC+AGG | + | chr2_3:40674197-40674216 | None:intergenic | 35.0% | |
| TAGTAAGGAGATAGATCAGA+TGG | - | chr2_3:40674207-40674226 | Msa0291960:intron | 35.0% | |
| AGTCAAATTACTAGAGGTAG+AGG | - | chr2_3:40674235-40674254 | Msa0291960:intron | 35.0% | |
| ACTTGTAGACCAGATTGATA+TGG | - | chr2_3:40674396-40674415 | Msa0291960:intron | 35.0% | |
| TTGAAATGAGTTTACCTTGG+GGG | + | chr2_3:40674521-40674540 | None:intergenic | 35.0% | |
| TTCATATCTCCGTCAAGATA+TGG | + | chr2_3:40674645-40674664 | None:intergenic | 35.0% | |
| CTTCAACAAGAGTCAAGATA+TGG | + | chr2_3:40674696-40674715 | None:intergenic | 35.0% | |
| ACTCTTGTTGAAGTTTAGCA+CGG | - | chr2_3:40674703-40674722 | Msa0291960:intron | 35.0% | |
| ! | ACAATATAAGTTGGCTACTG+CGG | + | chr2_3:40674771-40674790 | None:intergenic | 35.0% |
| TGATATATGTAAGATGGCCA+GGG | - | chr2_3:40674837-40674856 | Msa0291960:intron | 35.0% | |
| ATTCTGCATAGGCTTAGAAA+AGG | - | chr2_3:40674893-40674912 | Msa0291960:intron | 35.0% | |
| TTCTGCATAGGCTTAGAAAA+GGG | - | chr2_3:40674894-40674913 | Msa0291960:intron | 35.0% | |
| CAAGCACTATCTCTAGTAAT+TGG | + | chr2_3:40675364-40675383 | None:intergenic | 35.0% | |
| ACTAGAGATAGTGCTTGATA+AGG | - | chr2_3:40675367-40675386 | Msa0291960:intron | 35.0% | |
| ! | GATAAGGTCTTATGAAAGCA+TGG | - | chr2_3:40675383-40675402 | Msa0291960:intron | 35.0% |
| AGAATGTTGCATTGAATGTG+TGG | - | chr2_3:40675499-40675518 | Msa0291960:intron | 35.0% | |
| AGCACCTATTGTAGAATAGA+TGG | - | chr2_3:40675582-40675601 | Msa0291960:intron | 35.0% | |
| ! | TCGAGATTAATGAGTTGGAT+AGG | - | chr2_3:40675736-40675755 | Msa0291960:intron | 35.0% |
| ! | CGAGATTAATGAGTTGGATA+GGG | - | chr2_3:40675737-40675756 | Msa0291960:intron | 35.0% |
| TAGAACATTATGGCGGTATT+TGG | - | chr2_3:40675773-40675792 | Msa0291960:intron | 35.0% | |
| ! | GATAACTTATAAGGCTTGCT+TGG | - | chr2_3:40675822-40675841 | Msa0291960:intron | 35.0% |
| AGAAAAAAGCTAGACAACTG+CGG | - | chr2_3:40675967-40675986 | Msa0291960:intron | 35.0% | |
| CTGCAACTAGCTAAACTTAT+TGG | + | chr2_3:40676201-40676220 | None:intergenic | 35.0% | |
| CCTATGCACAAACACTAATT+TGG | + | chr2_3:40676274-40676293 | None:intergenic | 35.0% | |
| CCAAATTAGTGTTTGTGCAT+AGG | - | chr2_3:40676271-40676290 | Msa0291960:intron | 35.0% | |
| CTGAATGAAATCAGACACAT+TGG | + | chr2_3:40676320-40676339 | None:intergenic | 35.0% | |
| TACTTATCATGCTTCATCTC+AGG | - | chr2_3:40676585-40676604 | Msa0291960:intron | 35.0% | |
| ATTGCATTGGGCTTAAATTC+TGG | + | chr2_3:40676790-40676809 | None:intergenic | 35.0% | |
| TTACACATACAAGCTACTAG+AGG | + | chr2_3:40676978-40676997 | None:intergenic | 35.0% | |
| AGCTTGTATGTGTAATTGGA+AGG | - | chr2_3:40676983-40677002 | Msa0291960:CDS | 35.0% | |
| GCTTGTATGTGTAATTGGAA+GGG | - | chr2_3:40676984-40677003 | Msa0291960:CDS | 35.0% | |
| !!! | GACCTGTTTTCAGGTAATTT+TGG | - | chr2_3:40677055-40677074 | Msa0291960:intron | 35.0% |
| CACCAAAATTACCTGAAAAC+AGG | + | chr2_3:40677060-40677079 | None:intergenic | 35.0% | |
| !!! | GTTTTCAGGTAATTTTGGTG+AGG | - | chr2_3:40677060-40677079 | Msa0291960:intron | 35.0% |
| TTCCAGGTTAATCTTCCAAA+AGG | - | chr2_3:40677193-40677212 | Msa0291960:CDS | 35.0% | |
| !! | ATCCTTTTGGAAGATTAACC+TGG | + | chr2_3:40677198-40677217 | None:intergenic | 35.0% |
| ! | TGCACATATCCATATCCTTT+TGG | + | chr2_3:40677211-40677230 | None:intergenic | 35.0% |
| TATGTGCATTTCAAGACAAG+AGG | - | chr2_3:40677223-40677242 | Msa0291960:CDS | 35.0% | |
| ATGTGCATTTCAAGACAAGA+GGG | - | chr2_3:40677224-40677243 | Msa0291960:CDS | 35.0% | |
| TTATTGTACATGGATGGTGT+AGG | - | chr2_3:40677262-40677281 | Msa0291960:CDS | 35.0% | |
| TGTGGAAATTAATCCAACTC+GGG | + | chr2_3:40677297-40677316 | None:intergenic | 35.0% | |
| ATTTCCACAATCAAGCTTGT+TGG | - | chr2_3:40677308-40677327 | Msa0291960:intron | 35.0% | |
| ! | AAGGCATCAATTTCCAAATG+CGG | + | chr2_3:40677337-40677356 | None:intergenic | 35.0% |
| AACGACATTGCCATCTATTT+GGG | + | chr2_3:40677383-40677402 | None:intergenic | 35.0% | |
| TAACGACATTGCCATCTATT+TGG | + | chr2_3:40677384-40677403 | None:intergenic | 35.0% | |
| AATAGATGGCAATGTCGTTA+AGG | - | chr2_3:40677384-40677403 | Msa0291960:intron | 35.0% | |
| GTGCAGAAGTTGAAAAAGAT+GGG | - | chr2_3:40677497-40677516 | Msa0291960:intron | 35.0% | |
| AGCACTCAAAATATGGTTAC+CGG | + | chr2_3:40678024-40678043 | None:intergenic | 35.0% | |
| ATGTGAAAAAATTACCTGCG+AGG | + | chr2_3:40678238-40678257 | None:intergenic | 35.0% | |
| GTCATTTAACTGAACCTTAG+GGG | + | chr2_3:40678348-40678367 | None:intergenic | 35.0% | |
| !! | GTGTCATTTAACTGAACCTT+AGG | + | chr2_3:40678350-40678369 | None:intergenic | 35.0% |
| GTTAACAGAGTTAGATTGAG+GGG | + | chr2_3:40678408-40678427 | None:intergenic | 35.0% | |
| CATTCCATAAGTTTCGAGAT+TGG | + | chr2_3:40678539-40678558 | None:intergenic | 35.0% | |
| !! | GGTATATGTATTTTGAGGGA+AGG | + | chr2_3:40678716-40678735 | None:intergenic | 35.0% |
| GGACAAGGAAAAATATAGGA+AGG | + | chr2_3:40678737-40678756 | None:intergenic | 35.0% | |
| !! | TGAGAATGAATTCTAGGACA+AGG | + | chr2_3:40678752-40678771 | None:intergenic | 35.0% |
| TTTGGAAAAAAGGGGTTAGA+TGG | + | chr2_3:40678840-40678859 | None:intergenic | 35.0% | |
| ! | TCTGGAGTGTTTGGAAAAAA+GGG | + | chr2_3:40678849-40678868 | None:intergenic | 35.0% |
| ATCAATTGAATGGCCAAAGA+TGG | - | chr2_3:40678935-40678954 | Msa0291960:intron | 35.0% | |
| GCATGTGAACATATGATGTT+TGG | - | chr2_3:40679172-40679191 | Msa0291960:intron | 35.0% | |
| TGGATAACTACAAAACACCT+CGG | + | chr2_3:40679200-40679219 | None:intergenic | 35.0% | |
| CTACATACATGACCATTCAA+GGG | + | chr2_3:40679235-40679254 | None:intergenic | 35.0% | |
| ACTACATACATGACCATTCA+AGG | + | chr2_3:40679236-40679255 | None:intergenic | 35.0% | |
| TAATAATGGCAGAAGAGTTG+GGG | - | chr2_3:40679335-40679354 | Msa0291960:intron | 35.0% | |
| ! | GGATTACGATCTTGTTTCTT+AGG | - | chr2_3:40679356-40679375 | Msa0291960:intron | 35.0% |
| ATCATGTGCACTACAAATGT+TGG | + | chr2_3:40679456-40679475 | None:intergenic | 35.0% | |
| TTGAAAATGTACTAACGCCT+AGG | - | chr2_3:40679553-40679572 | Msa0291960:intron | 35.0% | |
| TCTATTCTGCTTACAATCTC+CGG | - | chr2_3:40679865-40679884 | Msa0291960:intron | 35.0% | |
| ! | TGACCAAAAAAAAAAGGCAC+CGG | + | chr2_3:40679887-40679906 | None:intergenic | 35.0% |
| !! | GCTAGAATTCACCTTTTTCA+TGG | - | chr2_3:40679919-40679938 | Msa0291960:intron | 35.0% |
| CCACTTATTCACCATGAAAA+AGG | + | chr2_3:40679933-40679952 | None:intergenic | 35.0% | |
| !! | CCTTTTTCATGGTGAATAAG+TGG | - | chr2_3:40679930-40679949 | Msa0291960:intron | 35.0% |
| ! | ACATGCATTGATATATGCAG+GGG | + | chr2_3:40679979-40679998 | None:intergenic | 35.0% |
| ! | GACATGCATTGATATATGCA+GGG | + | chr2_3:40679980-40679999 | None:intergenic | 35.0% |
| !!! | TGAATGAGCAGCATCTTTTT+TGG | - | chr2_3:40680252-40680271 | Msa0291960:intron | 35.0% |
| CAAAATTCCGGCTTAAATTC+GGG | + | chr2_3:40680301-40680320 | None:intergenic | 35.0% | |
| GCAAAATTCCGGCTTAAATT+CGG | + | chr2_3:40680302-40680321 | None:intergenic | 35.0% | |
| ATTGAAACACCAAAGTTAGG+CGG | + | chr2_3:40680324-40680343 | None:intergenic | 35.0% | |
| ATCATATCACTCTCCTCAAT+TGG | - | chr2_3:40680402-40680421 | Msa0291960:intron | 35.0% | |
| ATGGCTTAAAATGCCAATTG+AGG | + | chr2_3:40680418-40680437 | None:intergenic | 35.0% | |
| ! | CAATTGGCATTTTAAGCCAT+TGG | - | chr2_3:40680418-40680437 | Msa0291960:intron | 35.0% |
| TGTAAACTGCCTTCTAATTC+AGG | - | chr2_3:40680814-40680833 | Msa0291960:intron | 35.0% | |
| TTTCAAAGGCCTGAATTAGA+AGG | + | chr2_3:40680826-40680845 | None:intergenic | 35.0% | |
| TTCTAATTCAGGCCTTTGAA+AGG | - | chr2_3:40680825-40680844 | Msa0291960:intron | 35.0% | |
| CGAGAAGTTATTCTAGGTTA+AGG | - | chr2_3:40680967-40680986 | Msa0291960:intron | 35.0% | |
| ! | AATCTCTTCTAGAAATCCTG+TGG | - | chr2_3:40681196-40681215 | Msa0291960:five_prime_UTR | 35.0% |
| TCAATTACATAGAACTCCAC+AGG | + | chr2_3:40681215-40681234 | None:intergenic | 35.0% | |
| !! | AGTGAAGTGTTGGATTTGTG+TGG | + | chr2_3:40673433-40673452 | None:intergenic | 40.0% |
| TACCAGCTAGGGTTTATCAA+GGG | - | chr2_3:40673452-40673471 | Msa0291960:three_prime_UTR | 40.0% | |
| ! | GAAACTAGACTTGGGTTGTT+TGG | - | chr2_3:40674155-40674174 | Msa0291960:intron | 40.0% |
| TAAGGAGATAGATCAGATGG+AGG | - | chr2_3:40674210-40674229 | Msa0291960:intron | 40.0% | |
| AAGGAGATAGATCAGATGGA+GGG | - | chr2_3:40674211-40674230 | Msa0291960:intron | 40.0% | |
| GAGGGTAGTCAAATTACTAG+AGG | - | chr2_3:40674229-40674248 | Msa0291960:intron | 40.0% | |
| TCTTGTATTTGTGTCCCTCA+TGG | - | chr2_3:40674574-40674593 | Msa0291960:intron | 40.0% | |
| ! | TTAGCACGGTATGTCTTGTT+AGG | - | chr2_3:40674717-40674736 | Msa0291960:intron | 40.0% |
| GTGATATATGTAAGATGGCC+AGG | - | chr2_3:40674836-40674855 | Msa0291960:intron | 40.0% | |
| TCTGCATAGGCTTAGAAAAG+GGG | - | chr2_3:40674895-40674914 | Msa0291960:CDS | 40.0% | |
| TCTCTTGCTAACATGTGACT+AGG | + | chr2_3:40675146-40675165 | None:intergenic | 40.0% | |
| CAAAACGAGCATGTATGTTG+AGG | + | chr2_3:40675206-40675225 | None:intergenic | 40.0% | |
| TGTTCGACCACCAACTATAT+TGG | - | chr2_3:40675276-40675295 | Msa0291960:intron | 40.0% | |
| GCACTATCTCTAGTAATTGG+CGG | + | chr2_3:40675361-40675380 | None:intergenic | 40.0% | |
| CATTGAATGTGTGGTATGAG+TGG | - | chr2_3:40675508-40675527 | Msa0291960:intron | 40.0% | |
| AGATGGTAGAAACTCAGCTT+AGG | - | chr2_3:40675599-40675618 | Msa0291960:intron | 40.0% | |
| GGAACTCGAGATTAATGAGT+TGG | - | chr2_3:40675731-40675750 | Msa0291960:intron | 40.0% | |
| ! | TATAAGGCTTGCTTGGGATA+AGG | - | chr2_3:40675829-40675848 | Msa0291960:intron | 40.0% |
| !! | ATAAGGCTTGCTTGTTGTTG+AGG | - | chr2_3:40675846-40675865 | Msa0291960:intron | 40.0% |
| !! | TAAGGCTTGCTTGTTGTTGA+GGG | - | chr2_3:40675847-40675866 | Msa0291960:intron | 40.0% |
| !!! | CGGATGTTGGCCTTTTTTTT+TGG | + | chr2_3:40675930-40675949 | None:intergenic | 40.0% |
| TCTCCTTTATCCCTGAAACT+CGG | + | chr2_3:40675950-40675969 | None:intergenic | 40.0% | |
| GAAAAAAGCTAGACAACTGC+GGG | - | chr2_3:40675968-40675987 | Msa0291960:intron | 40.0% | |
| TAGTTTCGACCACAAACTAG+TGG | - | chr2_3:40676022-40676041 | Msa0291960:intron | 40.0% | |
| AGGCTTAAACTGGAAATGCA+AGG | - | chr2_3:40676061-40676080 | Msa0291960:intron | 40.0% | |
| AGTTTAGCTAGTTGCAGAAG+AGG | - | chr2_3:40676204-40676223 | Msa0291960:intron | 40.0% | |
| GTTTAGCTAGTTGCAGAAGA+GGG | - | chr2_3:40676205-40676224 | Msa0291960:intron | 40.0% | |
| TGTGACTCTACGATCTGTTA+TGG | - | chr2_3:40676354-40676373 | Msa0291960:intron | 40.0% | |
| GTGACTCTACGATCTGTTAT+GGG | - | chr2_3:40676355-40676374 | Msa0291960:intron | 40.0% | |
| TGAAAACAGGTCAGCAAAAG+AGG | + | chr2_3:40677047-40677066 | None:intergenic | 40.0% | |
| ! | TCTTTTGCTGACCTGTTTTC+AGG | - | chr2_3:40677046-40677065 | Msa0291960:intron | 40.0% |
| ! | TTTTGGTGAGGTTGTAAGTG+TGG | - | chr2_3:40677072-40677091 | Msa0291960:intron | 40.0% |
| TGTGCATTTCAAGACAAGAG+GGG | - | chr2_3:40677225-40677244 | Msa0291960:CDS | 40.0% | |
| GGTGCAGAAGTTGAAAAAGA+TGG | - | chr2_3:40677496-40677515 | Msa0291960:intron | 40.0% | |
| ATACATTCTCTTGGACGCTT+TGG | + | chr2_3:40677523-40677542 | None:intergenic | 40.0% | |
| ! | ACATGCCATTGATTGCTCAT+TGG | - | chr2_3:40678081-40678100 | Msa0291960:intron | 40.0% |
| AATTACAATGACCTCCCCTA+AGG | - | chr2_3:40678331-40678350 | Msa0291960:intron | 40.0% | |
| ATTTAACTGAACCTTAGGGG+AGG | + | chr2_3:40678345-40678364 | None:intergenic | 40.0% | |
| AAGCCTCACAAACTAGCAAT+AGG | - | chr2_3:40678450-40678469 | Msa0291960:intron | 40.0% | |
| AGCCTCACAAACTAGCAATA+GGG | - | chr2_3:40678451-40678470 | Msa0291960:intron | 40.0% | |
| ! | AACCCTATTGCTAGTTTGTG+AGG | + | chr2_3:40678456-40678475 | None:intergenic | 40.0% |
| GATTGGAATTCATAGCAGCA+AGG | + | chr2_3:40678522-40678541 | None:intergenic | 40.0% | |
| ! | TTAGGCTTAATTGGTTCCAG+CGG | + | chr2_3:40678570-40678589 | None:intergenic | 40.0% |
| ! | CTGGAGTGTTTGGAAAAAAG+GGG | + | chr2_3:40678848-40678867 | None:intergenic | 40.0% |
| !! | CTCTGGAGTGTTTGGAAAAA+AGG | + | chr2_3:40678850-40678869 | None:intergenic | 40.0% |
| !!! | CTTTTTTCCAAACACTCCAG+AGG | - | chr2_3:40678848-40678867 | Msa0291960:intron | 40.0% |
| ATTCACTGTTCTATGGGATG+AGG | - | chr2_3:40678897-40678916 | Msa0291960:intron | 40.0% | |
| TGGGATGAGGATATCTTCAT+AGG | - | chr2_3:40678910-40678929 | Msa0291960:intron | 40.0% | |
| GGATAACTACAAAACACCTC+GGG | + | chr2_3:40679199-40679218 | None:intergenic | 40.0% | |
| ATGTGCACTACAAATGTTGG+TGG | + | chr2_3:40679453-40679472 | None:intergenic | 40.0% | |
| ! | CAAGGTTTGTGGCTTTTACT+TGG | - | chr2_3:40679656-40679675 | Msa0291960:intron | 40.0% |
| AACTTTGACAACAGGTTTCC+CGG | - | chr2_3:40679723-40679742 | Msa0291960:intron | 40.0% | |
| !!! | TCTCCGGTGCCTTTTTTTTT+TGG | - | chr2_3:40679881-40679900 | Msa0291960:intron | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | - | chr2_3:40679897-40679916 | Msa0291960:intron | 40.0% |
| AAAGGTGAATTCTAGCCACT+AGG | + | chr2_3:40679915-40679934 | None:intergenic | 40.0% | |
| ! | GGACATGCATTGATATATGC+AGG | + | chr2_3:40679981-40680000 | None:intergenic | 40.0% |
| !!! | TTCTACTGGCGACTCTTTTT+TGG | - | chr2_3:40680157-40680176 | Msa0291960:intron | 40.0% |
| GCTGCTCATTCAATTGCATT+TGG | + | chr2_3:40680244-40680263 | None:intergenic | 40.0% | |
| GCTTAAATTCGGGAGAAAGT+AGG | + | chr2_3:40680291-40680310 | None:intergenic | 40.0% | |
| ACTTTCTCCCGAATTTAAGC+CGG | - | chr2_3:40680291-40680310 | Msa0291960:intron | 40.0% | |
| AAAGTTAGGCGGCAAAATTC+CGG | + | chr2_3:40680313-40680332 | None:intergenic | 40.0% | |
| CAATGTTCAAACACAGCACA+AGG | - | chr2_3:40680340-40680359 | Msa0291960:intron | 40.0% | |
| CCATGGAACACAAAATCCAA+TGG | + | chr2_3:40680437-40680456 | None:intergenic | 40.0% | |
| ! | CCATTGGATTTTGTGTTCCA+TGG | - | chr2_3:40680434-40680453 | Msa0291960:intron | 40.0% |
| ! | ATTGGTGGTATAAGGTGGAA+TGG | + | chr2_3:40680594-40680613 | None:intergenic | 40.0% |
| TATACCCTTGTTCGAAGAGT+TGG | - | chr2_3:40680619-40680638 | Msa0291960:intron | 40.0% | |
| AATGCCAACTCTTCGAACAA+GGG | + | chr2_3:40680626-40680645 | None:intergenic | 40.0% | |
| AAATGCCAACTCTTCGAACA+AGG | + | chr2_3:40680627-40680646 | None:intergenic | 40.0% | |
| ! | TTATCTATGGTTTGCGAGCT+GGG | + | chr2_3:40680890-40680909 | None:intergenic | 40.0% |
| ! | ATTATCTATGGTTTGCGAGC+TGG | + | chr2_3:40680891-40680910 | None:intergenic | 40.0% |
| CTAGAATAACTTCTCGTTGC+TGG | + | chr2_3:40680963-40680982 | None:intergenic | 40.0% | |
| CAGCAACGAGAAGTTATTCT+AGG | - | chr2_3:40680961-40680980 | Msa0291960:intron | 40.0% | |
| TCTAATTGTCAAGGTGCAAG+AGG | + | chr2_3:40681161-40681180 | None:intergenic | 40.0% | |
| CAACACTTCACTACCAGCTA+GGG | - | chr2_3:40673441-40673460 | Msa0291960:three_prime_UTR | 45.0% | |
| CTACCAGCTAGGGTTTATCA+AGG | - | chr2_3:40673451-40673470 | Msa0291960:three_prime_UTR | 45.0% | |
| AACCCTTGATAAACCCTAGC+TGG | + | chr2_3:40673457-40673476 | None:intergenic | 45.0% | |
| ACGCTCTCTCTCTTCAACAA+TGG | - | chr2_3:40673479-40673498 | Msa0291960:three_prime_UTR | 45.0% | |
| TCTTCAACAATGGCGAAACC+TGG | - | chr2_3:40673489-40673508 | Msa0291960:three_prime_UTR | 45.0% | |
| AGGAAGAGAAGGATCTGGAA+CGG | + | chr2_3:40673602-40673621 | None:intergenic | 45.0% | |
| AGAAGAGGAAGAGAAGGATC+TGG | + | chr2_3:40673607-40673626 | None:intergenic | 45.0% | |
| ! | TGGATGTACCTTTTGCGTCT+GGG | + | chr2_3:40673678-40673697 | None:intergenic | 45.0% |
| ! | ATGGATGTACCTTTTGCGTC+TGG | + | chr2_3:40673679-40673698 | None:intergenic | 45.0% |
| ! | ACTTGGGTTGTTTGGTCATG+TGG | - | chr2_3:40674163-40674182 | Msa0291960:intron | 45.0% |
| ! | AACGAAGCCTTATCCCAACA+TGG | + | chr2_3:40674361-40674380 | None:intergenic | 45.0% |
| ! | AAGGCTTCGTTGTTGTTGTG+TGG | - | chr2_3:40674370-40674389 | Msa0291960:intron | 45.0% |
| AAATGAGTTTACCTTGGGGG+AGG | + | chr2_3:40674518-40674537 | None:intergenic | 45.0% | |
| ATTTGTGTCCCTCATGGAGA+TGG | - | chr2_3:40674580-40674599 | Msa0291960:intron | 45.0% | |
| AACGTGAGATCACGAGACAA+AGG | - | chr2_3:40674931-40674950 | Msa0291960:intron | 45.0% | |
| AGTGTGGCCAATATAGTTGG+TGG | + | chr2_3:40675286-40675305 | None:intergenic | 45.0% | |
| TGGAGTGTGGCCAATATAGT+TGG | + | chr2_3:40675289-40675308 | None:intergenic | 45.0% | |
| ATCAGAGAGAGAGAGAGAGT+TGG | - | chr2_3:40675556-40675575 | Msa0291960:intron | 45.0% | |
| TGGTAGAAACTCAGCTTAGG+TGG | - | chr2_3:40675602-40675621 | Msa0291960:intron | 45.0% | |
| AGTCAAATCACTAGACGCAG+AGG | - | chr2_3:40675672-40675691 | Msa0291960:intron | 45.0% | |
| GCGGTATTTGGTCTATGTAG+CGG | - | chr2_3:40675785-40675804 | Msa0291960:intron | 45.0% | |
| !! | AAGGCTTGCTTGTTGTTGAG+GGG | - | chr2_3:40675848-40675867 | Msa0291960:intron | 45.0% |
| TATCCCTGAAACTCGGATGT+TGG | + | chr2_3:40675943-40675962 | None:intergenic | 45.0% | |
| CATCCGAGTTTCAGGGATAA+AGG | - | chr2_3:40675944-40675963 | Msa0291960:intron | 45.0% | |
| AGACAAGCAGAGGCTTAAAC+TGG | - | chr2_3:40676051-40676070 | Msa0291960:intron | 45.0% | |
| AAACTGGAAATGCAAGGCAG+AGG | - | chr2_3:40676067-40676086 | Msa0291960:intron | 45.0% | |
| CTCGCTCAAACTCTTGGTTT+GGG | + | chr2_3:40676124-40676143 | None:intergenic | 45.0% | |
| TTCTTCCTCGCTCAAACTCT+TGG | + | chr2_3:40676130-40676149 | None:intergenic | 45.0% | |
| AGTTTGAGCGAGGAAGAATG+AGG | - | chr2_3:40676132-40676151 | Msa0291960:intron | 45.0% | |
| GTTTGAGCGAGGAAGAATGA+GGG | - | chr2_3:40676133-40676152 | Msa0291960:intron | 45.0% | |
| AGGAAGAATGAGGGCTTGAT+GGG | - | chr2_3:40676142-40676161 | Msa0291960:intron | 45.0% | |
| GTGCTTGTGCAACACAGTTT+GGG | + | chr2_3:40676248-40676267 | None:intergenic | 45.0% | |
| TGTGCTTGTGCAACACAGTT+TGG | + | chr2_3:40676249-40676268 | None:intergenic | 45.0% | |
| CTACGATCTGTTATGGGAAC+AGG | - | chr2_3:40676361-40676380 | Msa0291960:intron | 45.0% | |
| AGAACAAGAGACTCACGTAC+AGG | + | chr2_3:40676620-40676639 | None:intergenic | 45.0% | |
| CTCAGCAGGAATGTCAATGA+AGG | - | chr2_3:40676653-40676672 | Msa0291960:CDS | 45.0% | |
| ! | CATTTGAAACCAGCGTCTCA+TGG | - | chr2_3:40676755-40676774 | Msa0291960:intron | 45.0% |
| AACCAGCGTCTCATGGTATT+AGG | - | chr2_3:40676762-40676781 | Msa0291960:intron | 45.0% | |
| ATCCTAATACCATGAGACGC+TGG | + | chr2_3:40676767-40676786 | None:intergenic | 45.0% | |
| TGAGGTTGTAAGTGTGGAGT+TGG | - | chr2_3:40677078-40677097 | Msa0291960:intron | 45.0% | |
| !! | TGTAAGTGTGGAGTTGGTGA+TGG | - | chr2_3:40677084-40677103 | Msa0291960:intron | 45.0% |
| !!! | TAGGTTGCTTTTTCCCGAGT+TGG | - | chr2_3:40677281-40677300 | Msa0291960:intron | 45.0% |
| GTTATGCAGGCCCAAATAGA+TGG | - | chr2_3:40677370-40677389 | Msa0291960:intron | 45.0% | |
| !!! | TCTTTGGAGCAACGGCTTTT+GGG | + | chr2_3:40677450-40677469 | None:intergenic | 45.0% |
| !! | TGCATCTCTCTTTGGAGCAA+CGG | + | chr2_3:40677458-40677477 | None:intergenic | 45.0% |
| TCATGATACCAGCTTCTCCT+CGG | - | chr2_3:40677621-40677640 | Msa0291960:intron | 45.0% | |
| TTAGACTCTCCTTATCGTCG+CGG | - | chr2_3:40677755-40677774 | Msa0291960:intron | 45.0% | |
| AATCACAAGCCAACCTTGCA+GGG | + | chr2_3:40677865-40677884 | None:intergenic | 45.0% | |
| ! | TTTGTAGGGTATCACCTCGA+AGG | - | chr2_3:40677942-40677961 | Msa0291960:intron | 45.0% |
| AAATATGGTTACCGGCGTCT+TGG | + | chr2_3:40678016-40678035 | None:intergenic | 45.0% | |
| ! | AGATCTTCTAGGAGGACTAC+GGG | + | chr2_3:40678146-40678165 | None:intergenic | 45.0% |
| ! | GAGATCTTCTAGGAGGACTA+CGG | + | chr2_3:40678147-40678166 | None:intergenic | 45.0% |
| AACAGAGTTAGATTGAGGGG+AGG | + | chr2_3:40678405-40678424 | None:intergenic | 45.0% | |
| !!! | ACTCTTTTCAAGTGAGCCTC+TGG | + | chr2_3:40678867-40678886 | None:intergenic | 45.0% |
| ACATATGATGTTTGGACCCG+AGG | - | chr2_3:40679180-40679199 | Msa0291960:intron | 45.0% | |
| ! | CTACAAATGTTGGTGGACAC+TGG | + | chr2_3:40679446-40679465 | None:intergenic | 45.0% |
| TAAAAGCCACAAACCTTGCG+AGG | + | chr2_3:40679654-40679673 | None:intergenic | 45.0% | |
| ! | GGAATTTTGCCGCCTAACTT+TGG | - | chr2_3:40680312-40680331 | Msa0291960:intron | 45.0% |
| TCAGCTATGCTATAGCGCTA+TGG | - | chr2_3:40680484-40680503 | Msa0291960:intron | 45.0% | |
| TTGCAGATCGCAAACGATAG+TGG | - | chr2_3:40680512-40680531 | Msa0291960:intron | 45.0% | |
| TGCAGATCGCAAACGATAGT+GGG | - | chr2_3:40680513-40680532 | Msa0291960:intron | 45.0% | |
| TGGTATAAGGTGGAATGGAG+CGG | + | chr2_3:40680589-40680608 | None:intergenic | 45.0% | |
| ! | TATCTATGGTTTGCGAGCTG+GGG | + | chr2_3:40680889-40680908 | None:intergenic | 45.0% |
| TGTGTGGAGTGAGTGAATCG+AGG | + | chr2_3:40673417-40673436 | None:intergenic | 50.0% | |
| ! | CCTAGCTGGTAGTGAAGTGT+TGG | + | chr2_3:40673443-40673462 | None:intergenic | 50.0% |
| CCAACACTTCACTACCAGCT+AGG | - | chr2_3:40673440-40673459 | Msa0291960:three_prime_UTR | 50.0% | |
| GAGAGAAGAAGATCCGGAGA+CGG | + | chr2_3:40673544-40673563 | None:intergenic | 50.0% | |
| GGAGGAGAGAGAAGAAGATC+CGG | + | chr2_3:40673550-40673569 | None:intergenic | 50.0% | |
| AGAAGATGAACGGGAAGAGG+AGG | + | chr2_3:40673568-40673587 | None:intergenic | 50.0% | |
| AGCGAGAGCGAGAAGATGAA+CGG | + | chr2_3:40673578-40673597 | None:intergenic | 50.0% | |
| ! | GGAAGAGAAGGATCTGGAAC+GGG | + | chr2_3:40673601-40673620 | None:intergenic | 50.0% |
| AGAGCGAGAAGAGGAAGAGA+AGG | + | chr2_3:40673613-40673632 | None:intergenic | 50.0% | |
| ! | ATGTACCTTTTGCGTCTGGG+AGG | + | chr2_3:40673675-40673694 | None:intergenic | 50.0% |
| ! | GTAGTTCTGCTGAACCAGCA+AGG | - | chr2_3:40674441-40674460 | Msa0291960:intron | 50.0% |
| GAAGGTCTCTTAGACTGTGG+AGG | + | chr2_3:40674494-40674513 | None:intergenic | 50.0% | |
| GGAGAAGGTCTCTTAGACTG+TGG | + | chr2_3:40674497-40674516 | None:intergenic | 50.0% | |
| ACTCCAAACGCAGTAGTGCT+GGG | - | chr2_3:40675303-40675322 | Msa0291960:intron | 50.0% | |
| TTGTGGGGTCGAGTTAGTGT+TGG | - | chr2_3:40675431-40675450 | Msa0291960:intron | 50.0% | |
| TGTGGGGTCGAGTTAGTGTT+GGG | - | chr2_3:40675432-40675451 | Msa0291960:intron | 50.0% | |
| AAGGCCAACATCCGAGTTTC+AGG | - | chr2_3:40675936-40675955 | Msa0291960:intron | 50.0% | |
| AGGCCAACATCCGAGTTTCA+GGG | - | chr2_3:40675937-40675956 | Msa0291960:intron | 50.0% | |
| ! | TCTGCTGTGCCACTAGTTTG+TGG | + | chr2_3:40676034-40676053 | None:intergenic | 50.0% |
| AGGCAGAGGTTATGAACCTG+TGG | - | chr2_3:40676081-40676100 | Msa0291960:intron | 50.0% | |
| CTCTTAGAGTTGTCTGCCAC+AGG | + | chr2_3:40676100-40676119 | None:intergenic | 50.0% | |
| CCTCGCTCAAACTCTTGGTT+TGG | + | chr2_3:40676125-40676144 | None:intergenic | 50.0% | |
| CCAAACCAAGAGTTTGAGCG+AGG | - | chr2_3:40676122-40676141 | Msa0291960:intron | 50.0% | |
| GAGGAAGAATGAGGGCTTGA+TGG | - | chr2_3:40676141-40676160 | Msa0291960:intron | 50.0% | |
| AGAGACTCACGTACAGGAGA+AGG | + | chr2_3:40676614-40676633 | None:intergenic | 50.0% | |
| TCCACGTTGAGAAACTCAGC+AGG | - | chr2_3:40676639-40676658 | Msa0291960:intron | 50.0% | |
| TCCTGCTGAGTTTCTCAACG+TGG | + | chr2_3:40676643-40676662 | None:intergenic | 50.0% | |
| GCAGCCAACAAGCTTGATTG+TGG | + | chr2_3:40677315-40677334 | None:intergenic | 50.0% | |
| GGTGAAGCTTTCTGTCTTGG+AGG | + | chr2_3:40677424-40677443 | None:intergenic | 50.0% | |
| GGTGGTGAAGCTTTCTGTCT+TGG | + | chr2_3:40677427-40677446 | None:intergenic | 50.0% | |
| !! | TTTGGAGCAACGGCTTTTGG+GGG | + | chr2_3:40677448-40677467 | None:intergenic | 50.0% |
| !!! | CTTTGGAGCAACGGCTTTTG+GGG | + | chr2_3:40677449-40677468 | None:intergenic | 50.0% |
| !!! | CTCTTTGGAGCAACGGCTTT+TGG | + | chr2_3:40677451-40677470 | None:intergenic | 50.0% |
| GCACCAGCATTATCAGTCCT+GGG | + | chr2_3:40677481-40677500 | None:intergenic | 50.0% | |
| TGCACCAGCATTATCAGTCC+TGG | + | chr2_3:40677482-40677501 | None:intergenic | 50.0% | |
| GGAGATCTTCTTCGTGGTGA+GGG | + | chr2_3:40677659-40677678 | None:intergenic | 50.0% | |
| AGGAGATCTTCTTCGTGGTG+AGG | + | chr2_3:40677660-40677679 | None:intergenic | 50.0% | |
| GACGAACAGGAGAATCAGCA+CGG | + | chr2_3:40677730-40677749 | None:intergenic | 50.0% | |
| GAGTCTAATCGACGACGAAC+AGG | + | chr2_3:40677743-40677762 | None:intergenic | 50.0% | |
| AGATGGAGAACGACCTCTTC+CGG | + | chr2_3:40677819-40677838 | None:intergenic | 50.0% | |
| ATCACAAGCCAACCTTGCAG+GGG | + | chr2_3:40677864-40677883 | None:intergenic | 50.0% | |
| CAATCACAAGCCAACCTTGC+AGG | + | chr2_3:40677866-40677885 | None:intergenic | 50.0% | |
| CCAACTGGAGATCTTCTAGG+AGG | + | chr2_3:40678154-40678173 | None:intergenic | 50.0% | |
| CCTCCTAGAAGATCTCCAGT+TGG | - | chr2_3:40678151-40678170 | Msa0291960:intron | 50.0% | |
| CGACCAACTGGAGATCTTCT+AGG | + | chr2_3:40678157-40678176 | None:intergenic | 50.0% | |
| GAAGATCTCCAGTTGGTCGT+AGG | - | chr2_3:40678158-40678177 | Msa0291960:intron | 50.0% | |
| GAGCGTGCAGATCTACGTAT+TGG | + | chr2_3:40678196-40678215 | None:intergenic | 50.0% | |
| CAAGATCATTCTCACCTCGC+AGG | - | chr2_3:40678221-40678240 | Msa0291960:intron | 50.0% | |
| ACTAGCAATAGGGTAGAGCG+TGG | - | chr2_3:40678492-40678511 | Msa0291960:intron | 50.0% | |
| GGCAACAAGCAGTTGTGTAG+TGG | - | chr2_3:40678617-40678636 | Msa0291960:intron | 50.0% | |
| !! | AAGTGAGCCTCTGGAGTGTT+TGG | + | chr2_3:40678858-40678877 | None:intergenic | 50.0% |
| ACTGCGACTCTTAGATCTCC+GGG | + | chr2_3:40679744-40679763 | None:intergenic | 50.0% | |
| GACTGCGACTCTTAGATCTC+CGG | + | chr2_3:40679745-40679764 | None:intergenic | 50.0% | |
| CTAAGAGTCGCAGTCCAAGA+AGG | - | chr2_3:40679750-40679769 | Msa0291960:intron | 50.0% | |
| ! | TGGTGAATAAGTGGGGTGTC+CGG | - | chr2_3:40679939-40679958 | Msa0291960:intron | 50.0% |
| ATTGATATATGCAGGGGCCG+GGG | + | chr2_3:40679973-40679992 | None:intergenic | 50.0% | |
| CATTGATATATGCAGGGGCC+GGG | + | chr2_3:40679974-40679993 | None:intergenic | 50.0% | |
| ! | GCATTGATATATGCAGGGGC+CGG | + | chr2_3:40679975-40679994 | None:intergenic | 50.0% |
| TGAGCATAGCTCAGTTGGCA+GGG | + | chr2_3:40680002-40680021 | None:intergenic | 50.0% | |
| TGCCAACTGAGCTATGCTCA+CGG | - | chr2_3:40680002-40680021 | Msa0291960:intron | 50.0% | |
| GGAGAAAGTAGGAGTCTGAC+AGG | + | chr2_3:40680280-40680299 | None:intergenic | 50.0% | |
| GGTATAAGGTGGAATGGAGC+GGG | + | chr2_3:40680588-40680607 | None:intergenic | 50.0% | |
| !! | CTACTGGCTCGTCCTTTCAA+AGG | + | chr2_3:40680840-40680859 | None:intergenic | 50.0% |
| ! | ATCTATGGTTTGCGAGCTGG+GGG | + | chr2_3:40680888-40680907 | None:intergenic | 50.0% |
| GCGAGAAGATGAACGGGAAG+AGG | + | chr2_3:40673571-40673590 | None:intergenic | 55.0% | |
| GCGAGAGCGAGAAGATGAAC+GGG | + | chr2_3:40673577-40673596 | None:intergenic | 55.0% | |
| ! | TACCTTTTGCGTCTGGGAGG+AGG | + | chr2_3:40673672-40673691 | None:intergenic | 55.0% |
| CTCTTAGACTGTGGAGGTGG+AGG | + | chr2_3:40674488-40674507 | None:intergenic | 55.0% | |
| GGTCTCTTAGACTGTGGAGG+TGG | + | chr2_3:40674491-40674510 | None:intergenic | 55.0% | |
| GTTTACCTTGGGGGAGGAGA+AGG | + | chr2_3:40674512-40674531 | None:intergenic | 55.0% | |
| TCCCTCATGGAGATGGAGAC+TGG | - | chr2_3:40674587-40674606 | Msa0291960:intron | 55.0% | |
| CCCAGTCTCCATCTCCATGA+GGG | + | chr2_3:40674591-40674610 | None:intergenic | 55.0% | |
| CCCTCATGGAGATGGAGACT+GGG | - | chr2_3:40674588-40674607 | Msa0291960:intron | 55.0% | |
| TCCCAGTCTCCATCTCCATG+AGG | + | chr2_3:40674592-40674611 | None:intergenic | 55.0% | |
| ! | GCACTACTGCGTTTGGAGTG+TGG | + | chr2_3:40675302-40675321 | None:intergenic | 55.0% |
| CACTCCAAACGCAGTAGTGC+TGG | - | chr2_3:40675302-40675321 | Msa0291960:intron | 55.0% | |
| ! | GGGCTTGATGGGTCTGTTGA+AGG | - | chr2_3:40676153-40676172 | Msa0291960:intron | 55.0% |
| !! | AGCTTGTTGGCTGCCGCATT+TGG | - | chr2_3:40677321-40677340 | Msa0291960:intron | 55.0% |
| CTCCAAAGAGAGATGCACCC+AGG | - | chr2_3:40677461-40677480 | Msa0291960:intron | 55.0% | |
| GTCCTGGGTGCATCTCTCTT+TGG | + | chr2_3:40677466-40677485 | None:intergenic | 55.0% | |
| ! | GCACCCAGGACTGATAATGC+TGG | - | chr2_3:40677475-40677494 | Msa0291960:intron | 55.0% |
| ! | GGTTTTCTCCGAGGAGAAGC+TGG | + | chr2_3:40677632-40677651 | None:intergenic | 55.0% |
| GATCTTCTTCGTGGTGAGGG+AGG | + | chr2_3:40677656-40677675 | None:intergenic | 55.0% | |
| GGCACAGGAGATCTTCTTCG+TGG | + | chr2_3:40677665-40677684 | None:intergenic | 55.0% | |
| CTTGGAGATCCAGCTCTTCG+AGG | + | chr2_3:40677686-40677705 | None:intergenic | 55.0% | |
| CGAGGAGATTCTGGTCGTCT+TGG | + | chr2_3:40677704-40677723 | None:intergenic | 55.0% | |
| GAACAGGAGAATCAGCACGG+CGG | + | chr2_3:40677727-40677746 | None:intergenic | 55.0% | |
| GATGGAGAACGACCTCTTCC+GGG | + | chr2_3:40677818-40677837 | None:intergenic | 55.0% | |
| GTTCTCCATCTCCACCACCA+AGG | - | chr2_3:40677828-40677847 | Msa0291960:intron | 55.0% | |
| CCAACCTTGCAGGGGATCTA+AGG | + | chr2_3:40677856-40677875 | None:intergenic | 55.0% | |
| CCTTAGATCCCCTGCAAGGT+TGG | - | chr2_3:40677853-40677872 | Msa0291960:intron | 55.0% | |
| GTATCACCTCGAAGGATGCG+TGG | - | chr2_3:40677950-40677969 | Msa0291960:intron | 55.0% | |
| TATGGTTACCGGCGTCTTGG+AGG | + | chr2_3:40678013-40678032 | None:intergenic | 55.0% | |
| ATGGAATGCATTAGCGCCGC+TGG | - | chr2_3:40678551-40678570 | Msa0291960:intron | 55.0% | |
| GAGGTCGACCACCTATGAGA+CGG | - | chr2_3:40679595-40679614 | Msa0291960:intron | 55.0% | |
| AGGTCGACCACCTATGAGAC+GGG | - | chr2_3:40679596-40679615 | Msa0291960:intron | 55.0% | |
| GATGACCTTCCCCGTCTCAT+AGG | + | chr2_3:40679609-40679628 | None:intergenic | 55.0% | |
| TGATTCGCCAAGTCCTCGCA+AGG | - | chr2_3:40679638-40679657 | Msa0291960:intron | 55.0% | |
| CCACAAACCTTGCGAGGACT+TGG | + | chr2_3:40679648-40679667 | None:intergenic | 55.0% | |
| CCAAGTCCTCGCAAGGTTTG+TGG | - | chr2_3:40679645-40679664 | Msa0291960:intron | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr2_3:40679940-40679959 | Msa0291960:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr2_3:40679941-40679960 | Msa0291960:intron | 55.0% |
| GTGAGCATAGCTCAGTTGGC+AGG | + | chr2_3:40680003-40680022 | None:intergenic | 55.0% | |
| GCCAACTGAGCTATGCTCAC+GGG | - | chr2_3:40680003-40680022 | Msa0291960:intron | 55.0% | |
| CCAACTGAGCTATGCTCACG+GGG | - | chr2_3:40680004-40680023 | Msa0291960:intron | 55.0% | |
| TATGCTCACGGGGACATCTC+CGG | - | chr2_3:40680014-40680033 | Msa0291960:intron | 55.0% | |
| TAAGGTGGAATGGAGCGGGA+TGG | + | chr2_3:40680584-40680603 | None:intergenic | 55.0% | |
| GCTGCTGCTACTGTTGCTAC+TGG | + | chr2_3:40680856-40680875 | None:intergenic | 55.0% | |
| GATCCGGAGACGGAACCTGA+CGG | + | chr2_3:40673534-40673553 | None:intergenic | 60.0% | |
| GTCTGGGAGGAGGAGGACTA+CGG | + | chr2_3:40673662-40673681 | None:intergenic | 60.0% | |
| ! | CTTTTGCGTCTGGGAGGAGG+AGG | + | chr2_3:40673669-40673688 | None:intergenic | 60.0% |
| CTCCTCCTCCCAGACGCAAA+AGG | - | chr2_3:40673667-40673686 | Msa0291960:three_prime_UTR | 60.0% | |
| TCTGCTGAACCAGCAAGGCG+AGG | - | chr2_3:40674446-40674465 | Msa0291960:intron | 60.0% | |
| TGTGGAGGTGGAGGAAGAGG+AGG | + | chr2_3:40674479-40674498 | None:intergenic | 60.0% | |
| GACTGTGGAGGTGGAGGAAG+AGG | + | chr2_3:40674482-40674501 | None:intergenic | 60.0% | |
| AGAGACCTTCTCCTCCCCCA+AGG | - | chr2_3:40674504-40674523 | Msa0291960:intron | 60.0% | |
| GCACCCAGCACTACTGCGTT+TGG | + | chr2_3:40675309-40675328 | None:intergenic | 60.0% | |
| ! | GGGGTCGAGTTAGTGTTGGG+TGG | - | chr2_3:40675435-40675454 | Msa0291960:intron | 60.0% |
| GTGGCACAGCAGACAAGCAG+AGG | - | chr2_3:40676041-40676060 | Msa0291960:intron | 60.0% | |
| ! | GAGGGAGGAGGTTTTCTCCG+AGG | + | chr2_3:40677641-40677660 | None:intergenic | 60.0% |
| CTTCTTCGTGGTGAGGGAGG+AGG | + | chr2_3:40677653-40677672 | None:intergenic | 60.0% | |
| TCTCCTGTGCCTCGAAGAGC+TGG | - | chr2_3:40677674-40677693 | Msa0291960:intron | 60.0% | |
| GATCCAGCTCTTCGAGGCAC+AGG | + | chr2_3:40677680-40677699 | None:intergenic | 60.0% | |
| TCTCCTTATCGTCGCGGAGC+TGG | - | chr2_3:40677761-40677780 | Msa0291960:intron | 60.0% | |
| TCTCCAGCTCCGCGACGATA+AGG | + | chr2_3:40677767-40677786 | None:intergenic | 60.0% | |
| GAGCTGGAGACACACCTCCT+AGG | - | chr2_3:40677777-40677796 | Msa0291960:intron | 60.0% | |
| CTGGAGACACACCTCCTAGG+AGG | - | chr2_3:40677780-40677799 | Msa0291960:intron | 60.0% | |
| GACACAGGTCTCCTCCTAGG+AGG | + | chr2_3:40677794-40677813 | None:intergenic | 60.0% | |
| GGAGACACAGGTCTCCTCCT+AGG | + | chr2_3:40677797-40677816 | None:intergenic | 60.0% | |
| AGGAGGAGACCTGTGTCTCC+CGG | - | chr2_3:40677797-40677816 | Msa0291960:intron | 60.0% | |
| AGACCTGTGTCTCCCGGAAG+AGG | - | chr2_3:40677803-40677822 | Msa0291960:intron | 60.0% | |
| ! | GATCTAAGGCGCCTTGGTGG+TGG | + | chr2_3:40677842-40677861 | None:intergenic | 60.0% |
| GAGGAGAACGTCTCCGACCT+GGG | + | chr2_3:40677985-40678004 | None:intergenic | 60.0% | |
| CGACTACGCCTACGACCAAC+TGG | + | chr2_3:40678169-40678188 | None:intergenic | 60.0% | |
| GGTCGACCACCTATGAGACG+GGG | - | chr2_3:40679597-40679616 | Msa0291960:intron | 60.0% | |
| GACCACCTATGAGACGGGGA+AGG | - | chr2_3:40679601-40679620 | Msa0291960:intron | 60.0% | |
| GACCTTCCCCGTCTCATAGG+TGG | + | chr2_3:40679606-40679625 | None:intergenic | 60.0% | |
| CCCCGTGAGCATAGCTCAGT+TGG | + | chr2_3:40680007-40680026 | None:intergenic | 60.0% | |
| ! | TATGGTTTGCGAGCTGGGGG+TGG | + | chr2_3:40680885-40680904 | None:intergenic | 60.0% |
| CCACCGTCAGGTTCCGTCTC+CGG | - | chr2_3:40673528-40673547 | Msa0291960:three_prime_UTR | 65.0% | |
| CGGCTCTTGGAACTGCGGGA+GGG | + | chr2_3:40673636-40673655 | None:intergenic | 65.0% | |
| GCTGCGGCTCTTGGAACTGC+GGG | + | chr2_3:40673640-40673659 | None:intergenic | 65.0% | |
| GGCTGCGGCTCTTGGAACTG+CGG | + | chr2_3:40673641-40673660 | None:intergenic | 65.0% | |
| AGGACTACGGCTGCGGCTCT+TGG | + | chr2_3:40673649-40673668 | None:intergenic | 65.0% | |
| GAGGAGGAGGACTACGGCTG+CGG | + | chr2_3:40673656-40673675 | None:intergenic | 65.0% | |
| GGAGATCGACCTCGCCTTGC+TGG | + | chr2_3:40674458-40674477 | None:intergenic | 65.0% | |
| ! | ACGCAGTAGTGCTGGGTGCG+AGG | - | chr2_3:40675310-40675329 | Msa0291960:intron | 65.0% |
| !! | GGAGCAACGGCTTTTGGGGG+TGG | + | chr2_3:40677445-40677464 | None:intergenic | 65.0% |
| CGACCTCTTCCGGGAGACAC+AGG | + | chr2_3:40677809-40677828 | None:intergenic | 65.0% | |
| !! | AGGCGCCTTGGTGGTGGAGA+TGG | + | chr2_3:40677836-40677855 | None:intergenic | 65.0% |
| ! | GGGGATCTAAGGCGCCTTGG+TGG | + | chr2_3:40677845-40677864 | None:intergenic | 65.0% |
| ! | GCAGGGGATCTAAGGCGCCT+TGG | + | chr2_3:40677848-40677867 | None:intergenic | 65.0% |
| GGCGCCTTAGATCCCCTGCA+AGG | - | chr2_3:40677849-40677868 | Msa0291960:intron | 65.0% | |
| GGGCTTCCACGCATCCTTCG+AGG | + | chr2_3:40677959-40677978 | None:intergenic | 65.0% | |
| CGAAGGATGCGTGGAAGCCC+AGG | - | chr2_3:40677959-40677978 | Msa0291960:intron | 65.0% | |
| AACGTCTCCGACCTGGGCCT+GGG | + | chr2_3:40677979-40677998 | None:intergenic | 65.0% | |
| GGAGGAGAACGTCTCCGACC+TGG | + | chr2_3:40677986-40678005 | None:intergenic | 65.0% | |
| CTCCTCCACCTCCAAGACGC+CGG | - | chr2_3:40678002-40678021 | Msa0291960:CDS | 65.0% | |
| TACCGGCGTCTTGGAGGTGG+AGG | + | chr2_3:40678007-40678026 | None:intergenic | 65.0% | |
| GGTTACCGGCGTCTTGGAGG+TGG | + | chr2_3:40678010-40678029 | None:intergenic | 65.0% | |
| GGACTACGGGCTCGTCTAGG+AGG | + | chr2_3:40678133-40678152 | None:intergenic | 65.0% | |
| GGAGGACTACGGGCTCGTCT+AGG | + | chr2_3:40678136-40678155 | None:intergenic | 65.0% | |
| GGTGAGCGACGAGCTCGACC+AGG | + | chr2_3:40673510-40673529 | None:intergenic | 70.0% | |
| GCTCGTCGCTCACCACCGTC+AGG | - | chr2_3:40673516-40673535 | Msa0291960:three_prime_UTR | 70.0% | |
| CCGGAGACGGAACCTGACGG+TGG | + | chr2_3:40673531-40673550 | None:intergenic | 70.0% | |
| GCGGGAGGGAGAGCGAGAAG+AGG | + | chr2_3:40673622-40673641 | None:intergenic | 70.0% | |
| GCGGCTCTTGGAACTGCGGG+AGG | + | chr2_3:40673637-40673656 | None:intergenic | 70.0% | |
| GCACGGCGGCGAGGAGATTC+TGG | + | chr2_3:40677713-40677732 | None:intergenic | 70.0% | |
| GGAGAATCAGCACGGCGGCG+AGG | + | chr2_3:40677722-40677741 | None:intergenic | 70.0% | |
| ATGCGTGGAAGCCCAGGCCC+AGG | - | chr2_3:40677965-40677984 | Msa0291960:intron | 70.0% | |
| GTGGAAGCCCAGGCCCAGGT+CGG | - | chr2_3:40677969-40677988 | Msa0291960:intron | 70.0% | |
| GAACGTCTCCGACCTGGGCC+TGG | + | chr2_3:40677980-40677999 | None:intergenic | 70.0% | |
| CGGCGTCTTGGAGGTGGAGG+AGG | + | chr2_3:40678004-40678023 | None:intergenic | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2_3:40679953-40679972 | Msa0291960:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2_3:40679961-40679980 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 40673394 | 40681272 | 40673394 | ID=Msa0291960;Name=Msa0291960 |
| chr2_3 | mRNA | 40673394 | 40681272 | 40673394 | ID=Msa0291960-mRNA-1;Parent=Msa0291960;Name=Msa0291960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=104|0.9|1|1|1|1|11|367|388 |
| chr2_3 | exon | 40673394 | 40673830 | 40673394 | ID=Msa0291960-mRNA-1:exon:13094;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40674895 | 40674929 | 40674895 | ID=Msa0291960-mRNA-1:exon:13093;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40675007 | 40675070 | 40675007 | ID=Msa0291960-mRNA-1:exon:13092;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40676424 | 40676540 | 40676424 | ID=Msa0291960-mRNA-1:exon:13091;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40676643 | 40676717 | 40676643 | ID=Msa0291960-mRNA-1:exon:13090;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40676796 | 40677033 | 40676796 | ID=Msa0291960-mRNA-1:exon:13089;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40677128 | 40677287 | 40677128 | ID=Msa0291960-mRNA-1:exon:13088;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40677387 | 40677467 | 40677387 | ID=Msa0291960-mRNA-1:exon:13087;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40677552 | 40677598 | 40677552 | ID=Msa0291960-mRNA-1:exon:13086;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40677971 | 40678059 | 40677971 | ID=Msa0291960-mRNA-1:exon:13085;Parent=Msa0291960-mRNA-1 |
| chr2_3 | exon | 40680978 | 40681272 | 40680978 | ID=Msa0291960-mRNA-1:exon:13084;Parent=Msa0291960-mRNA-1 |
| chr2_3 | five_prime_UTR | 40681169 | 40681272 | 40681169 | ID=Msa0291960-mRNA-1:five_prime_utr;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40680978 | 40681168 | 40680978 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40677971 | 40678059 | 40677971 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40677552 | 40677598 | 40677552 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40677387 | 40677467 | 40677387 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40677128 | 40677287 | 40677128 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40676796 | 40677033 | 40676796 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40676643 | 40676717 | 40676643 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40676424 | 40676540 | 40676424 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40675007 | 40675070 | 40675007 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40674895 | 40674929 | 40674895 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | CDS | 40673761 | 40673830 | 40673761 | ID=Msa0291960-mRNA-1:cds;Parent=Msa0291960-mRNA-1 |
| chr2_3 | three_prime_UTR | 40673394 | 40673760 | 40673394 | ID=Msa0291960-mRNA-1:three_prime_utr;Parent=Msa0291960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
