Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865520 | XP_003618085.1 | 90.762 | 433 | 5 | 3 | 1 | 432 | 1 | 399 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865520 | sp|P35055|HEM6_SOYBN | 74.769 | 432 | 61 | 5 | 1 | 432 | 2 | 385 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865520 | G7KFC7 | 90.762 | 433 | 5 | 3 | 1 | 432 | 1 | 399 | 0.0 | 797 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035050 | Msa0865520 | 0.813749 | 2.186481e-51 | -8.615850e-47 |
| Msa0745250 | Msa0865520 | 0.930857 | 8.879602e-94 | -8.615850e-47 |
| Msa0775170 | Msa0865520 | 0.824708 | 6.974163e-54 | -8.615850e-47 |
| Msa0794160 | Msa0865520 | 0.865125 | 7.409051e-65 | -8.615850e-47 |
| Msa0826800 | Msa0865520 | 0.893305 | 7.110971e-75 | -8.615850e-47 |
| Msa0374340 | Msa0865520 | 0.805214 | 1.487466e-49 | -8.615850e-47 |
| Msa0374420 | Msa0865520 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0403470 | Msa0865520 | 0.824428 | 8.115719e-54 | -8.615850e-47 |
| Msa0469870 | Msa0865520 | 0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0500840 | Msa0865520 | 0.838245 | 3.223936e-57 | -8.615850e-47 |
| Msa0500870 | Msa0865520 | 0.829169 | 5.984322e-55 | -8.615850e-47 |
| Msa0515440 | Msa0865520 | 0.811029 | 8.589585e-51 | -8.615850e-47 |
| Msa0865520 | Msa0968470 | 0.833698 | 4.593921e-56 | -8.615850e-47 |
| Msa0865520 | Msa1174770 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
| Msa0865520 | Msa1208450 | 0.806978 | 6.325519e-50 | -8.615850e-47 |
| Msa0865520 | Msa1298390 | 0.831923 | 1.267545e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865520 | MtrunA17_Chr5g0448441 | 90.762 | 433 | 5 | 3 | 1 | 432 | 1 | 399 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865520 | AT1G03475.1 | 72.406 | 424 | 69 | 5 | 19 | 432 | 1 | 386 | 0.0 | 605 |
| Msa0865520 | AT4G03205.2 | 70.293 | 239 | 64 | 3 | 11 | 248 | 3 | 235 | 4.74e-110 | 324 |
| Msa0865520 | AT4G03205.1 | 70.464 | 237 | 63 | 3 | 11 | 246 | 3 | 233 | 9.70e-110 | 323 |
Find 129 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTGGTATACTCTAAAA+TGG | 0.190907 | 5_4:-66221118 | None:intergenic |
| CTTTGTAACAGTGTAATTTC+TGG | 0.196507 | 5_4:+66215749 | Msa0865520:five_prime_UTR |
| GTTTGTGTAGTGAGTGATTT+TGG | 0.207980 | 5_4:-66215903 | None:intergenic |
| ACGATATGTTGAATTTAATT+TGG | 0.210051 | 5_4:+66221594 | Msa0865520:CDS |
| GTTAATGTTTCTGTTGTTTA+TGG | 0.239575 | 5_4:+66216239 | Msa0865520:CDS |
| CATTCTTCGCTTCCTACTTC+TGG | 0.260841 | 5_4:-66221931 | None:intergenic |
| GTATCGGGGCGTTCTGATTC+TGG | 0.283725 | 5_4:-66215999 | None:intergenic |
| CAAAACCTATTCGGTTCAAT+AGG | 0.294354 | 5_4:+66222432 | Msa0865520:three_prime_UTR |
| TCTTCAAGATGGTGCTGTTT+GGG | 0.316342 | 5_4:+66216205 | Msa0865520:CDS |
| TATCAGTTGACCACCCAATT+TGG | 0.330643 | 5_4:+66221999 | Msa0865520:three_prime_UTR |
| AAATGCAAGGTTGGGGCAAA+TGG | 0.346094 | 5_4:-66218882 | None:intergenic |
| TCAAGACCTGGTGGTGGTGG+TGG | 0.349702 | 5_4:+66216170 | Msa0865520:CDS |
| TTCTTCAAGATGGTGCTGTT+TGG | 0.354033 | 5_4:+66216204 | Msa0865520:CDS |
| CAGTTTCGTGTATACTTAGT+TGG | 0.364789 | 5_4:+66221143 | Msa0865520:CDS |
| ATCACACCATTTCTTGAATC+GGG | 0.366775 | 5_4:-66220466 | None:intergenic |
| GGATTTAATCAAAACCTATT+CGG | 0.367933 | 5_4:+66222423 | Msa0865520:three_prime_UTR |
| TGATTTACAATCCACCTAAT+AGG | 0.370631 | 5_4:-66222109 | None:intergenic |
| ATAAATTAGAGCCATTCCTT+TGG | 0.373068 | 5_4:-66221979 | None:intergenic |
| GAAAGTTTAAAGAAGATGTT+TGG | 0.390331 | 5_4:+66216147 | Msa0865520:CDS |
| TTTGGCTGCAGGTATATGAT+AGG | 0.392398 | 5_4:+66221700 | Msa0865520:intron |
| CGAGATGAAAGGAGAGGACT+TGG | 0.396118 | 5_4:+66221301 | Msa0865520:CDS |
| GCTGCTAAAGGCGCTGCCGC+GGG | 0.396279 | 5_4:+66216287 | Msa0865520:CDS |
| CATCACACCATTTCTTGAAT+CGG | 0.396583 | 5_4:-66220467 | None:intergenic |
| TATGATAGGGGTACAACATT+TGG | 0.397928 | 5_4:+66221714 | Msa0865520:CDS |
| AAAACTTACTGAGCTAATTC+CGG | 0.400140 | 5_4:-66216351 | None:intergenic |
| CACGGCATTGTAACGAGAAA+TGG | 0.414340 | 5_4:-66215786 | None:intergenic |
| TAAATTAGAGCCATTCCTTT+GGG | 0.416224 | 5_4:-66221978 | None:intergenic |
| GATAATTGAAATGCAAGGTT+GGG | 0.419160 | 5_4:-66218890 | None:intergenic |
| GGTTCCAGTGATCAGAAGCC+GGG | 0.437600 | 5_4:+66216308 | Msa0865520:CDS |
| CAAGACCTGGTGGTGGTGGT+GGG | 0.438924 | 5_4:+66216171 | Msa0865520:CDS |
| ATGCTTCTTTCCTTTGCTAC+TGG | 0.439387 | 5_4:+66221364 | Msa0865520:CDS |
| GATGCTTATCGTGCTGCTAA+AGG | 0.441514 | 5_4:+66216275 | Msa0865520:CDS |
| GCAAACCTATTGAACCGAAT+AGG | 0.446022 | 5_4:-66222437 | None:intergenic |
| GTGTATACTTAGTTGGATCA+TGG | 0.457225 | 5_4:+66221150 | Msa0865520:CDS |
| TTGGCTGCAGGTATATGATA+GGG | 0.462004 | 5_4:+66221701 | Msa0865520:intron |
| GAAAGGAAGAGAAGAGAAAG+AGG | 0.467658 | 5_4:-66215714 | None:intergenic |
| TGGTCAAGACCTGGTGGTGG+TGG | 0.468637 | 5_4:+66216167 | Msa0865520:CDS |
| TTTCTCTCCCACTGACTGCT+CGG | 0.469406 | 5_4:+66221772 | Msa0865520:CDS |
| TGCTGCTAAAGGCGCTGCCG+CGG | 0.470266 | 5_4:+66216286 | Msa0865520:CDS |
| CAAAGAAGAGAAATGAAGAA+AGG | 0.471882 | 5_4:-66215731 | None:intergenic |
| CAGAAGTAGGAAGCGAAGAA+TGG | 0.479994 | 5_4:+66221932 | Msa0865520:CDS |
| ATACACGAAACTGACTCAAT+TGG | 0.481012 | 5_4:-66221133 | None:intergenic |
| CGATAATTGAAATGCAAGGT+TGG | 0.487126 | 5_4:-66218891 | None:intergenic |
| AGGCCCCGGCTTCTGATCAC+TGG | 0.487699 | 5_4:-66216312 | None:intergenic |
| CTAGACAATGGTGGTTCGGT+GGG | 0.497187 | 5_4:+66219744 | Msa0865520:CDS |
| ATAGGTTCTTGAGGAACAAT+GGG | 0.497212 | 5_4:-66222291 | None:intergenic |
| CTTCTCGAATCGAGCTCTAA+CGG | 0.498945 | 5_4:-66216066 | None:intergenic |
| CACCATTGTCTAGGTGCTCC+AGG | 0.508528 | 5_4:-66219734 | None:intergenic |
| TCTCCCACTGACTGCTCGGT+GGG | 0.508835 | 5_4:+66221776 | Msa0865520:CDS |
| ATGCCGCGGAGAAATGTATC+GGG | 0.509233 | 5_4:-66216014 | None:intergenic |
| GCACCTAGACAATGGTGGTT+CGG | 0.513604 | 5_4:+66219740 | Msa0865520:CDS |
| CAATTGGTATACTCTAAAAT+GGG | 0.514224 | 5_4:-66221117 | None:intergenic |
| GATGAAAGGAGAGGACTTGG+AGG | 0.516310 | 5_4:+66221304 | Msa0865520:CDS |
| AAAGGAAGAGAAGAGAAAGA+GGG | 0.520419 | 5_4:-66215713 | None:intergenic |
| TTAACGATAACTCGATGATA+AGG | 0.520504 | 5_4:-66215663 | None:intergenic |
| CAAGTCCTCTCCTTTCATCT+CGG | 0.521529 | 5_4:-66221300 | None:intergenic |
| TTGCCGCGTGACATGTTTGA+GGG | 0.525987 | 5_4:+66221173 | Msa0865520:CDS |
| CCTAGACAATGGTGGTTCGG+TGG | 0.527031 | 5_4:+66219743 | Msa0865520:CDS |
| ATTAGTAGAGTTCTTCAAGA+TGG | 0.527187 | 5_4:+66216194 | Msa0865520:CDS |
| TTAGCAGCACGATAAGCATC+AGG | 0.529867 | 5_4:-66216272 | None:intergenic |
| CCACCGAACCACCATTGTCT+AGG | 0.530916 | 5_4:-66219743 | None:intergenic |
| GGGTTCCAGTGATCAGAAGC+CGG | 0.531610 | 5_4:+66216307 | Msa0865520:CDS |
| AAGGAAGAGAAGAGAAAGAG+GGG | 0.535760 | 5_4:-66215712 | None:intergenic |
| TGCTTTCTGATGATCTGTGA+AGG | 0.536139 | 5_4:-66221551 | None:intergenic |
| GTTGCCGCGTGACATGTTTG+AGG | 0.538242 | 5_4:+66221172 | Msa0865520:CDS |
| ATATACCTATCATAGAGAAA+AGG | 0.538904 | 5_4:+66221518 | Msa0865520:CDS |
| AATGCAAGGTTGGGGCAAAT+GGG | 0.541145 | 5_4:-66218881 | None:intergenic |
| AAAGGAGTGATGGAGTAAGA+AGG | 0.543812 | 5_4:-66215828 | None:intergenic |
| GATAGGTTCTTGAGGAACAA+TGG | 0.544329 | 5_4:-66222292 | None:intergenic |
| ACACATACCTTTGGGAGCAT+CGG | 0.548551 | 5_4:-66218925 | None:intergenic |
| GATGCCGCGGAGAAATGTAT+CGG | 0.549690 | 5_4:-66216015 | None:intergenic |
| TGGCTGCAGGTATATGATAG+GGG | 0.553038 | 5_4:+66221702 | Msa0865520:intron |
| TGTGTGCAGAAACCAGAAGT+AGG | 0.553657 | 5_4:+66221919 | Msa0865520:intron |
| TTTGAAGATGTGAATGTGAA+AGG | 0.554486 | 5_4:-66215846 | None:intergenic |
| TTGTTATGACTCGTTGAAAG+TGG | 0.563289 | 5_4:-66215947 | None:intergenic |
| CTAATCCCACCACCACCACC+AGG | 0.564042 | 5_4:-66216176 | None:intergenic |
| AAATTCAGCACCGAGATGAA+AGG | 0.567112 | 5_4:+66221290 | Msa0865520:intron |
| CTCTCCCACTGACTGCTCGG+TGG | 0.567673 | 5_4:+66221775 | Msa0865520:CDS |
| AATGTAAGCAGGGGTTAAGT+CGG | 0.569045 | 5_4:-66219771 | None:intergenic |
| CAAGCAATTACCAGTAGCAA+AGG | 0.569474 | 5_4:-66221374 | None:intergenic |
| GCGAAATAGATAGGTTCTTG+AGG | 0.572408 | 5_4:-66222300 | None:intergenic |
| AAGCATGGCAACAATTGCGA+AGG | 0.577934 | 5_4:+66221569 | Msa0865520:CDS |
| AGACAATGGTGGTTCGGTGG+GGG | 0.578555 | 5_4:+66219746 | Msa0865520:CDS |
| AAGTTCATCAAAATTAGCGT+TGG | 0.580941 | 5_4:+66222402 | Msa0865520:three_prime_UTR |
| TGTGAATGTGAAAGGAGTGA+TGG | 0.581520 | 5_4:-66215838 | None:intergenic |
| ATTGAAGAAGCTGATGGTGG+TGG | 0.583194 | 5_4:+66216125 | Msa0865520:CDS |
| TCACACCATTTCTTGAATCG+GGG | 0.588342 | 5_4:-66220465 | None:intergenic |
| ACATGTTTGAGGGATTAAAG+TGG | 0.590088 | 5_4:+66221183 | Msa0865520:CDS |
| TCACAGATCATCAGAAAGCA+TGG | 0.590156 | 5_4:+66221554 | Msa0865520:CDS |
| TATTCCCACCGAGCAGTCAG+TGG | 0.590842 | 5_4:-66221780 | None:intergenic |
| ATAATTGAAATGCAAGGTTG+GGG | 0.591405 | 5_4:-66218889 | None:intergenic |
| CTCTATGATAGGTATATAAG+CGG | 0.593614 | 5_4:-66221512 | None:intergenic |
| AGCATGGCAACAATTGCGAA+GGG | 0.599983 | 5_4:+66221570 | Msa0865520:CDS |
| CACACCATTTCTTGAATCGG+GGG | 0.601935 | 5_4:-66220464 | None:intergenic |
| TTGAAAGTGGTGTGAAGATG+TGG | 0.605973 | 5_4:-66215934 | None:intergenic |
| CTCCGTCGTTGTCGATGCCG+CGG | 0.607776 | 5_4:-66216028 | None:intergenic |
| TCTATGATAGGTATATAAGC+GGG | 0.613583 | 5_4:-66221511 | None:intergenic |
| GGTGCTGTTTGGGAGAAAGC+TGG | 0.617824 | 5_4:+66216215 | Msa0865520:CDS |
| AGATGCATGCATTAACCCAA+AGG | 0.618643 | 5_4:+66221963 | Msa0865520:CDS |
| TTTGAAACCGATGCTCCCAA+AGG | 0.621458 | 5_4:+66218918 | Msa0865520:CDS |
| ATTCCCACCGAGCAGTCAGT+GGG | 0.621466 | 5_4:-66221779 | None:intergenic |
| TAGACAATGGTGGTTCGGTG+GGG | 0.621581 | 5_4:+66219745 | Msa0865520:CDS |
| GCTTTCTGATGATCTGTGAA+GGG | 0.631666 | 5_4:-66221550 | None:intergenic |
| CATGCATTAACCCAAAGGAA+TGG | 0.631803 | 5_4:+66221968 | Msa0865520:CDS |
| ATAGCGATAATTGAAATGCA+AGG | 0.631845 | 5_4:-66218895 | None:intergenic |
| GTTTGGTCAAGACCTGGTGG+TGG | 0.634333 | 5_4:+66216164 | Msa0865520:CDS |
| CTCCTGGAGCACCTAGACAA+TGG | 0.634463 | 5_4:+66219732 | Msa0865520:CDS |
| GTTCCAGTGATCAGAAGCCG+GGG | 0.635867 | 5_4:+66216309 | Msa0865520:CDS |
| TACAAGTACATGATATACAC+CGG | 0.641806 | 5_4:-66222061 | None:intergenic |
| ACCTATCATAGAGAAAAGGA+AGG | 0.642984 | 5_4:+66221522 | Msa0865520:CDS |
| AGCTCTAACGGAAGATGCCG+CGG | 0.645789 | 5_4:-66216054 | None:intergenic |
| ACAGAGAAAACAATAAACGA+AGG | 0.647468 | 5_4:+66215636 | None:intergenic |
| GTTTAAACTGCACTGTACTG+TGG | 0.648171 | 5_4:+66222253 | Msa0865520:three_prime_UTR |
| GAAGATGTTTGGTCAAGACC+TGG | 0.652074 | 5_4:+66216158 | Msa0865520:CDS |
| CTGGAGCACCTAGACAATGG+TGG | 0.660100 | 5_4:+66219735 | Msa0865520:CDS |
| ACAATGGGTAGTACAAAGAG+AGG | 0.661628 | 5_4:-66222276 | None:intergenic |
| TCTAACGGAAGATGCCGCGG+TGG | 0.668976 | 5_4:-66216051 | None:intergenic |
| CTCCGCGGCATCGACAACGA+CGG | 0.669627 | 5_4:+66216026 | Msa0865520:CDS |
| CAGCACCGAGATGAAAGGAG+AGG | 0.676832 | 5_4:+66221295 | Msa0865520:intron |
| GCAGCACGATAAGCATCAGG+TGG | 0.684090 | 5_4:-66216269 | None:intergenic |
| CGACAACGACGGAGCCACCG+CGG | 0.685176 | 5_4:+66216037 | Msa0865520:CDS |
| CTTCTGATCACTGGAACCCG+CGG | 0.687460 | 5_4:-66216303 | None:intergenic |
| GCATGGCAACAATTGCGAAG+GGG | 0.716040 | 5_4:+66221571 | Msa0865520:CDS |
| GCAATTGAAGAAGCTGATGG+TGG | 0.716899 | 5_4:+66216122 | Msa0865520:CDS |
| AATGCAATTGAAGAAGCTGA+TGG | 0.722953 | 5_4:+66216119 | Msa0865520:CDS |
| CGCCCCGATACATTTCTCCG+CGG | 0.735875 | 5_4:+66216011 | Msa0865520:CDS |
| AATCCCTCAAACATGTCACG+CGG | 0.736181 | 5_4:-66221176 | None:intergenic |
| GCTGATATAGAAATTGTACA+CGG | 0.741835 | 5_4:-66215804 | None:intergenic |
| GATGTTTGGTCAAGACCTGG+TGG | 0.753790 | 5_4:+66216161 | Msa0865520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGATAATTTAGAATTT+TGG | - | chr5_4:66217525-66217544 | None:intergenic | 10.0% |
| !!! | TTTTTTTAGATTATATTGAT+AGG | + | chr5_4:66218368-66218387 | Msa0865520:intron | 10.0% |
| !!! | TTTTCTTATTGTAATTATTT+TGG | + | chr5_4:66219002-66219021 | Msa0865520:intron | 10.0% |
| !!! | TTTCTTATTGTAATTATTTT+GGG | + | chr5_4:66219003-66219022 | Msa0865520:intron | 10.0% |
| !!! | AATATATATAGATAATTTGT+TGG | + | chr5_4:66221397-66221416 | Msa0865520:intron | 10.0% |
| !! | ATAAAATGTTGGAATATAAT+TGG | - | chr5_4:66216399-66216418 | None:intergenic | 15.0% |
| !! | ATGAATGAATTATAAAATGT+TGG | - | chr5_4:66216410-66216429 | None:intergenic | 15.0% |
| !! | TTTCATAAACTCAAAAATAA+GGG | - | chr5_4:66216722-66216741 | None:intergenic | 15.0% |
| !!! | TTTTCATAAACTCAAAAATA+AGG | - | chr5_4:66216723-66216742 | None:intergenic | 15.0% |
| !! | AATCATTATAATTACTAGTA+AGG | + | chr5_4:66217097-66217116 | Msa0865520:intron | 15.0% |
| !! | ACTTTATATCTAAAAATTGA+TGG | + | chr5_4:66217628-66217647 | Msa0865520:intron | 15.0% |
| !! | ACTTTATATCTAAAAATTGA+TGG | + | chr5_4:66217628-66217647 | Msa0865520:intron | 15.0% |
| !! | AAAATTTACTCTTATATTGA+AGG | - | chr5_4:66220641-66220660 | None:intergenic | 15.0% |
| !! | GATAGATATAAATGTTAGTT+TGG | + | chr5_4:66216439-66216458 | Msa0865520:intron | 20.0% |
| !!! | GATTTTTGAATTCATTGATT+TGG | + | chr5_4:66216481-66216500 | Msa0865520:intron | 20.0% |
| !!! | AAAATTGATTTTGTCATGTT+CGG | + | chr5_4:66216587-66216606 | Msa0865520:intron | 20.0% |
| !! | TATTATTAATAAGCTTGTCA+AGG | - | chr5_4:66216836-66216855 | None:intergenic | 20.0% |
| !!! | AAAAAAACTTTTAGTGACTA+GGG | - | chr5_4:66216900-66216919 | None:intergenic | 20.0% |
| !!! | AAAAAAAACTTTTAGTGACT+AGG | - | chr5_4:66216901-66216920 | None:intergenic | 20.0% |
| !!! | TTTTGAATGAATTGATTTTG+TGG | + | chr5_4:66217296-66217315 | Msa0865520:intron | 20.0% |
| !!! | TTTGAATGAATTGATTTTGT+GGG | + | chr5_4:66217297-66217316 | Msa0865520:intron | 20.0% |
| !! | AATCACAAAGTTTGTAAATT+AGG | + | chr5_4:66217327-66217346 | Msa0865520:intron | 20.0% |
| !! | ATCACAAAGTTTGTAAATTA+GGG | + | chr5_4:66217328-66217347 | Msa0865520:intron | 20.0% |
| !!! | AATTAGTCTGATTTGTATAA+AGG | + | chr5_4:66217546-66217565 | Msa0865520:intron | 20.0% |
| !! | AAAAAGAATGTCAGAAATAT+AGG | + | chr5_4:66218320-66218339 | Msa0865520:intron | 20.0% |
| !!! | TTTTAGATTATATTGATAGG+CGG | + | chr5_4:66218371-66218390 | Msa0865520:intron | 20.0% |
| !! | CAAATTATTCATTGAATGTT+TGG | - | chr5_4:66218807-66218826 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACCAAAGAAT+TGG | - | chr5_4:66219872-66219891 | None:intergenic | 20.0% |
| !!! | TTATTTGAGTAGTTTTAATC+TGG | + | chr5_4:66219939-66219958 | Msa0865520:intron | 20.0% |
| !!! | TGATGATTACTTTTATATCA+AGG | + | chr5_4:66220485-66220504 | Msa0865520:CDS | 20.0% |
| !! | TACTAATTAAATTGAGTATG+TGG | + | chr5_4:66221224-66221243 | Msa0865520:intron | 20.0% |
| !! | ACGATATGTTGAATTTAATT+TGG | + | chr5_4:66221594-66221613 | Msa0865520:CDS | 20.0% |
| !!! | AATTGTAATTTGCATTAGAT+AGG | - | chr5_4:66222233-66222252 | None:intergenic | 20.0% |
| !! | TGTTTCTTTTTCTATGGAAA+CGG | - | chr5_4:66215979-66215998 | None:intergenic | 25.0% |
| ! | GAAAGTTTAAAGAAGATGTT+TGG | + | chr5_4:66216147-66216166 | Msa0865520:CDS | 25.0% |
| !! | GTTAATGTTTCTGTTGTTTA+TGG | + | chr5_4:66216239-66216258 | Msa0865520:CDS | 25.0% |
| !!! | TAAATGTTAGTTTGGTTTTG+CGG | + | chr5_4:66216447-66216466 | Msa0865520:intron | 25.0% |
| !!! | AAATTGAGTTGGCATATATT+TGG | + | chr5_4:66216524-66216543 | Msa0865520:intron | 25.0% |
| ! | GAAAAATAAGCCAATTGAAA+CGG | + | chr5_4:66216695-66216714 | Msa0865520:intron | 25.0% |
| !! | AAAAAACTTTTAGTGACTAG+GGG | - | chr5_4:66216899-66216918 | None:intergenic | 25.0% |
| ! | TAAAACTGCTATAAAATTGC+AGG | + | chr5_4:66217058-66217077 | Msa0865520:intron | 25.0% |
| ! | AAAACTGCTATAAAATTGCA+GGG | + | chr5_4:66217059-66217078 | Msa0865520:intron | 25.0% |
| !!! | ATAGACACTTAGTTTTTTGT+TGG | + | chr5_4:66217207-66217226 | Msa0865520:intron | 25.0% |
| !!! | TAGACACTTAGTTTTTTGTT+GGG | + | chr5_4:66217208-66217227 | Msa0865520:intron | 25.0% |
| !! | TAACTATGTATCGATCAATT+GGG | - | chr5_4:66217234-66217253 | None:intergenic | 25.0% |
| ! | TCACAAAGTTTGTAAATTAG+GGG | + | chr5_4:66217329-66217348 | Msa0865520:intron | 25.0% |
| !! | TCATTTTCTTAAATTACTGC+CGG | - | chr5_4:66218180-66218199 | None:intergenic | 25.0% |
| !! | AAACCAATTTTCATCTTTCT+CGG | - | chr5_4:66218455-66218474 | None:intergenic | 25.0% |
| !!! | AGAAAGATGAAAATTGGTTT+TGG | + | chr5_4:66218455-66218474 | Msa0865520:intron | 25.0% |
| !!! | GTATTTTTTTGCCAAAATCA+TGG | + | chr5_4:66218719-66218738 | Msa0865520:intron | 25.0% |
| !! | GAATGTTTGGATTCAATTTT+GGG | - | chr5_4:66218794-66218813 | None:intergenic | 25.0% |
| !! | TGAATGTTTGGATTCAATTT+TGG | - | chr5_4:66218795-66218814 | None:intergenic | 25.0% |
| ! | AAAAACACATTTCTAAATCC+TGG | - | chr5_4:66219107-66219126 | None:intergenic | 25.0% |
| !! | AGGATTTAGAAATGTGTTTT+TGG | + | chr5_4:66219106-66219125 | Msa0865520:intron | 25.0% |
| !!! | ATTTAGAAATGTGTTTTTGG+CGG | + | chr5_4:66219109-66219128 | Msa0865520:intron | 25.0% |
| ! | TGAATAGATAAAGAGACAAA+GGG | - | chr5_4:66219178-66219197 | None:intergenic | 25.0% |
| ! | TTGAATAGATAAAGAGACAA+AGG | - | chr5_4:66219179-66219198 | None:intergenic | 25.0% |
| !! | TTTTTGCAATCTTGTTCTTT+TGG | + | chr5_4:66219333-66219352 | Msa0865520:intron | 25.0% |
| !! | TTTTGCAATCTTGTTCTTTT+GGG | + | chr5_4:66219334-66219353 | Msa0865520:intron | 25.0% |
| !!! | TAATGGTTTTTCAAATCTTG+TGG | + | chr5_4:66219838-66219857 | Msa0865520:intron | 25.0% |
| ! | TCAAATAAGATGTCAAAGTA+AGG | - | chr5_4:66219927-66219946 | None:intergenic | 25.0% |
| ! | TGAATTAAATATGTCTAGCT+TGG | + | chr5_4:66219987-66220006 | Msa0865520:intron | 25.0% |
| !!! | ATATTTTAAGCATAGGGATT+TGG | + | chr5_4:66220033-66220052 | Msa0865520:intron | 25.0% |
| !!! | TATGTTTTGTTTCCATTTCA+AGG | - | chr5_4:66220145-66220164 | None:intergenic | 25.0% |
| !! | TTGGAGATTCAATTCTTTTT+GGG | - | chr5_4:66220237-66220256 | None:intergenic | 25.0% |
| !! | TTTGGAGATTCAATTCTTTT+TGG | - | chr5_4:66220238-66220257 | None:intergenic | 25.0% |
| ! | AAAGAATTGAATCTCCAAAT+TGG | + | chr5_4:66220239-66220258 | Msa0865520:intron | 25.0% |
| !! | ACTCTTTTATCATACCAATT+TGG | - | chr5_4:66220256-66220275 | None:intergenic | 25.0% |
| ! | TATGATAAAAGAGTCAATGT+AGG | + | chr5_4:66220262-66220281 | Msa0865520:intron | 25.0% |
| !!! | ATCCGATATTTTTTTGCTTA+AGG | + | chr5_4:66220351-66220370 | Msa0865520:intron | 25.0% |
| !!! | TCCGATATTTTTTTGCTTAA+GGG | + | chr5_4:66220352-66220371 | Msa0865520:intron | 25.0% |
| ! | TTATATAATGCTTCTGTTGT+AGG | + | chr5_4:66220401-66220420 | Msa0865520:intron | 25.0% |
| ! | AAATCTCCATAATGTGAAAA+AGG | - | chr5_4:66220522-66220541 | None:intergenic | 25.0% |
| ! | GCTGATAATATGATATATTC+AGG | + | chr5_4:66220832-66220851 | Msa0865520:intron | 25.0% |
| !! | TTTTTATGCATTTAACTGCA+AGG | + | chr5_4:66220941-66220960 | Msa0865520:intron | 25.0% |
| !! | TGAACCTCATTGATAATATT+GGG | + | chr5_4:66221013-66221032 | Msa0865520:intron | 25.0% |
| ! | TAATCCCAATATTATCAATG+AGG | - | chr5_4:66221020-66221039 | None:intergenic | 25.0% |
| !!! | CAATTGGTATACTCTAAAAT+GGG | - | chr5_4:66221120-66221139 | None:intergenic | 25.0% |
| !! | TCAATTGGTATACTCTAAAA+TGG | - | chr5_4:66221121-66221140 | None:intergenic | 25.0% |
| ! | ATATACCTATCATAGAGAAA+AGG | + | chr5_4:66221518-66221537 | Msa0865520:CDS | 25.0% |
| !! | AATTTTATAACTGGAACATC+AGG | - | chr5_4:66221875-66221894 | None:intergenic | 25.0% |
| ! | ATTGAAAAAGCTACCAAATT+GGG | - | chr5_4:66222015-66222034 | None:intergenic | 25.0% |
| ! | TATTGAAAAAGCTACCAAAT+TGG | - | chr5_4:66222016-66222035 | None:intergenic | 25.0% |
| !! | TGCATAATTTTACAACATCA+GGG | - | chr5_4:66222151-66222170 | None:intergenic | 25.0% |
| !! | TTGCATAATTTTACAACATC+AGG | - | chr5_4:66222152-66222171 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTGCGAAATAGAT+AGG | - | chr5_4:66222312-66222331 | None:intergenic | 25.0% |
| ! | TCTATTTCGCAAAAAAACAA+AGG | + | chr5_4:66222313-66222332 | Msa0865520:three_prime_UTR | 25.0% |
| ! | GGATTTAATCAAAACCTATT+CGG | + | chr5_4:66222423-66222442 | Msa0865520:three_prime_UTR | 25.0% |
| TTAACGATAACTCGATGATA+AGG | - | chr5_4:66215666-66215685 | None:intergenic | 30.0% | |
| CAAAGAAGAGAAATGAAGAA+AGG | - | chr5_4:66215734-66215753 | None:intergenic | 30.0% | |
| CTTTGTAACAGTGTAATTTC+TGG | + | chr5_4:66215749-66215768 | Msa0865520:five_prime_UTR | 30.0% | |
| GCTGATATAGAAATTGTACA+CGG | - | chr5_4:66215807-66215826 | None:intergenic | 30.0% | |
| TTTGAAGATGTGAATGTGAA+AGG | - | chr5_4:66215849-66215868 | None:intergenic | 30.0% | |
| ! | TTTGTGTAGTGAGTGATTTT+GGG | - | chr5_4:66215905-66215924 | None:intergenic | 30.0% |
| ! | TTCTGGTGTTTCTTTTTCTA+TGG | - | chr5_4:66215985-66216004 | None:intergenic | 30.0% |
| ATTAGTAGAGTTCTTCAAGA+TGG | + | chr5_4:66216194-66216213 | Msa0865520:CDS | 30.0% | |
| AAAACTTACTGAGCTAATTC+CGG | - | chr5_4:66216354-66216373 | None:intergenic | 30.0% | |
| GATTTGGATTCAAATTGAGT+TGG | + | chr5_4:66216497-66216516 | Msa0865520:intron | 30.0% | |
| ! | GAATTGATTCTACTTGAACT+TGG | + | chr5_4:66216616-66216635 | Msa0865520:intron | 30.0% |
| TCGATACGAAAAAACTTACA+AGG | + | chr5_4:66217026-66217045 | Msa0865520:intron | 30.0% | |
| GGATACTGTTTAATCTTGTA+TGG | + | chr5_4:66217118-66217137 | Msa0865520:intron | 30.0% | |
| ! | CTAACTATGTATCGATCAAT+TGG | - | chr5_4:66217235-66217254 | None:intergenic | 30.0% |
| TAGATACATAAGTGTTTGCT+TGG | + | chr5_4:66217252-66217271 | Msa0865520:intron | 30.0% | |
| CACAAAGTTTGTAAATTAGG+GGG | + | chr5_4:66217330-66217349 | Msa0865520:intron | 30.0% | |
| TAAAATCTCCGAGTTAGAAA+AGG | + | chr5_4:66217355-66217374 | Msa0865520:intron | 30.0% | |
| ! | GTTTTCATCCTTTTCTAACT+CGG | - | chr5_4:66217366-66217385 | None:intergenic | 30.0% |
| ! | AGAAAAGGATGAAAACGTTT+TGG | + | chr5_4:66217370-66217389 | Msa0865520:intron | 30.0% |
| !!! | AGTGACTGTACTCTTTTTTA+TGG | - | chr5_4:66217657-66217676 | None:intergenic | 30.0% |
| CATCCTATCATTCTTGAATT+CGG | + | chr5_4:66217718-66217737 | Msa0865520:intron | 30.0% | |
| AAACCGAATTCAAGAATGAT+AGG | - | chr5_4:66217724-66217743 | None:intergenic | 30.0% | |
| ATCTAGAAGAATCCATATGT+TGG | - | chr5_4:66217765-66217784 | None:intergenic | 30.0% | |
| !! | CTTGTATTTTCAAGATCCTT+TGG | - | chr5_4:66217565-66217584 | None:intergenic | 30.0% |
| !!! | AGTGACTGTACTCTTTTTTA+TGG | - | chr5_4:66217657-66217676 | None:intergenic | 30.0% |
| CATCCTATCATTCTTGAATT+CGG | + | chr5_4:66217718-66217737 | Msa0865520:intron | 30.0% | |
| AAACCGAATTCAAGAATGAT+AGG | - | chr5_4:66217724-66217743 | None:intergenic | 30.0% | |
| ATCTAGAAGAATCCATATGT+TGG | - | chr5_4:66217765-66217784 | None:intergenic | 30.0% | |
| ! | AACCAATTTTCATCTTTCTC+GGG | - | chr5_4:66218454-66218473 | None:intergenic | 30.0% |
| AGTGAGTTCAATGATAACTT+TGG | + | chr5_4:66218530-66218549 | Msa0865520:intron | 30.0% | |
| GTGAGTTCAATGATAACTTT+GGG | + | chr5_4:66218531-66218550 | Msa0865520:intron | 30.0% | |
| !! | CTAGTTAGAATCACTTTTAG+AGG | + | chr5_4:66218582-66218601 | Msa0865520:intron | 30.0% |
| TGAGTTTGATAAAATTGCAG+TGG | + | chr5_4:66218664-66218683 | Msa0865520:intron | 30.0% | |
| ! | AGTGGTATTTACCATGATTT+TGG | + | chr5_4:66218682-66218701 | Msa0865520:intron | 30.0% |
| ! | CAGATTGTTTGTTGAAATCA+CGG | - | chr5_4:66218752-66218771 | None:intergenic | 30.0% |
| ATAATTGAAATGCAAGGTTG+GGG | - | chr5_4:66218892-66218911 | None:intergenic | 30.0% | |
| GATAATTGAAATGCAAGGTT+GGG | - | chr5_4:66218893-66218912 | None:intergenic | 30.0% | |
| ATAGCGATAATTGAAATGCA+AGG | - | chr5_4:66218898-66218917 | None:intergenic | 30.0% | |
| !! | AAGTAGCTTTGAAATGAACA+CGG | - | chr5_4:66218984-66219003 | None:intergenic | 30.0% |
| TTTACCTTTGTCAACATTAG+TGG | + | chr5_4:66219135-66219154 | Msa0865520:intron | 30.0% | |
| !!! | GTTTGTTTTTTAGCCTGTTT+TGG | + | chr5_4:66219225-66219244 | Msa0865520:intron | 30.0% |
| CACAATAACAAATCCAAAAC+AGG | - | chr5_4:66219241-66219260 | None:intergenic | 30.0% | |
| !!! | CTGTTTTGGATTTGTTATTG+TGG | + | chr5_4:66219239-66219258 | Msa0865520:intron | 30.0% |
| !!! | TTCTTTTGGGTTGGTTTTTT+TGG | + | chr5_4:66219347-66219366 | Msa0865520:intron | 30.0% |
| ACATAGTATAAGGCATACTT+TGG | - | chr5_4:66219424-66219443 | None:intergenic | 30.0% | |
| AAAGTATGCCTTATACTATG+TGG | + | chr5_4:66219423-66219442 | Msa0865520:intron | 30.0% | |
| ! | GGCAGTTAAAAGTGTAATTT+CGG | - | chr5_4:66219544-66219563 | None:intergenic | 30.0% |
| GCTGTACTTATGATAGTTAA+GGG | - | chr5_4:66219565-66219584 | None:intergenic | 30.0% | |
| AGCTGTACTTATGATAGTTA+AGG | - | chr5_4:66219566-66219585 | None:intergenic | 30.0% | |
| ATCTGGATTAAACCTTGAAA+TGG | + | chr5_4:66220130-66220149 | Msa0865520:intron | 30.0% | |
| !! | ATTCAATTCTTTTTGGGAAG+GGG | - | chr5_4:66220231-66220250 | None:intergenic | 30.0% |
| !! | GATTCAATTCTTTTTGGGAA+GGG | - | chr5_4:66220232-66220251 | None:intergenic | 30.0% |
| !! | AGATTCAATTCTTTTTGGGA+AGG | - | chr5_4:66220233-66220252 | None:intergenic | 30.0% |
| GCCCTTAAGCAAAAAAATAT+CGG | - | chr5_4:66220356-66220375 | None:intergenic | 30.0% | |
| !! | TCTCATCCTTTTTCACATTA+TGG | + | chr5_4:66220513-66220532 | Msa0865520:intron | 30.0% |
| TGTATGTTAGGATGAATGAT+AGG | + | chr5_4:66220742-66220761 | Msa0865520:intron | 30.0% | |
| TTAGGATGAATGATAGGATA+AGG | + | chr5_4:66220748-66220767 | Msa0865520:intron | 30.0% | |
| ATGATATATTCAGGAGACTT+AGG | + | chr5_4:66220841-66220860 | Msa0865520:intron | 30.0% | |
| TGATATATTCAGGAGACTTA+GGG | + | chr5_4:66220842-66220861 | Msa0865520:intron | 30.0% | |
| ! | CTGAACCTCATTGATAATAT+TGG | + | chr5_4:66221012-66221031 | Msa0865520:intron | 30.0% |
| ! | GTGCTGAATTTAAAACGAAA+AGG | - | chr5_4:66221281-66221300 | None:intergenic | 30.0% |
| TCTATGATAGGTATATAAGC+GGG | - | chr5_4:66221514-66221533 | None:intergenic | 30.0% | |
| CTCTATGATAGGTATATAAG+CGG | - | chr5_4:66221515-66221534 | None:intergenic | 30.0% | |
| AAGGAATAGAGCACAAAATT+TGG | - | chr5_4:66221645-66221664 | None:intergenic | 30.0% | |
| AGTTTAAACCTGATCTGAAA+AGG | - | chr5_4:66221664-66221683 | None:intergenic | 30.0% | |
| ACAACATTTGGACTAAAAAC+TGG | + | chr5_4:66221726-66221745 | Msa0865520:CDS | 30.0% | |
| ! | TTCAGCAGCAATTTTATAAC+TGG | - | chr5_4:66221884-66221903 | None:intergenic | 30.0% |
| TAAATTAGAGCCATTCCTTT+GGG | - | chr5_4:66221981-66222000 | None:intergenic | 30.0% | |
| ATAAATTAGAGCCATTCCTT+TGG | - | chr5_4:66221982-66222001 | None:intergenic | 30.0% | |
| !! | GATAGCTTGTATTCTTTTTC+CGG | + | chr5_4:66222042-66222061 | Msa0865520:three_prime_UTR | 30.0% |
| TACAAGTACATGATATACAC+CGG | - | chr5_4:66222064-66222083 | None:intergenic | 30.0% | |
| TGATTTACAATCCACCTAAT+AGG | - | chr5_4:66222112-66222131 | None:intergenic | 30.0% | |
| AAGTTCATCAAAATTAGCGT+TGG | + | chr5_4:66222402-66222421 | Msa0865520:three_prime_UTR | 30.0% | |
| AAAGGAAGAGAAGAGAAAGA+GGG | - | chr5_4:66215716-66215735 | None:intergenic | 35.0% | |
| ! | TTGTGTAGTGAGTGATTTTG+GGG | - | chr5_4:66215904-66215923 | None:intergenic | 35.0% |
| ! | GTTTGTGTAGTGAGTGATTT+TGG | - | chr5_4:66215906-66215925 | None:intergenic | 35.0% |
| TTGTTATGACTCGTTGAAAG+TGG | - | chr5_4:66215950-66215969 | None:intergenic | 35.0% | |
| AATGCAATTGAAGAAGCTGA+TGG | + | chr5_4:66216119-66216138 | Msa0865520:CDS | 35.0% | |
| GAGTTGGATTCAAATTGAGT+TGG | + | chr5_4:66216513-66216532 | Msa0865520:intron | 35.0% | |
| ! | GAGCAGTCATACTTGATTTT+TGG | + | chr5_4:66216558-66216577 | Msa0865520:intron | 35.0% |
| !! | CAGTCATACTTGATTTTTGG+AGG | + | chr5_4:66216561-66216580 | Msa0865520:intron | 35.0% |
| AAATAAGGGACCGTTTCAAT+TGG | - | chr5_4:66216708-66216727 | None:intergenic | 35.0% | |
| AAGCTTGTCAAGGTAGTTTA+TGG | - | chr5_4:66216826-66216845 | None:intergenic | 35.0% | |
| ! | GCTTCTACTTCATCTTTTGT+CGG | + | chr5_4:66217455-66217474 | Msa0865520:intron | 35.0% |
| !! | TAGAATTTTGGCACAGTCTA+AGG | - | chr5_4:66217513-66217532 | None:intergenic | 35.0% |
| ! | ATTCGGTTTGATATCATGTC+TGG | + | chr5_4:66217735-66217754 | Msa0865520:intron | 35.0% |
| !!! | ATGTCTGGTTTTCCAACATA+TGG | + | chr5_4:66217750-66217769 | Msa0865520:intron | 35.0% |
| ! | ATTCGGTTTGATATCATGTC+TGG | + | chr5_4:66217735-66217754 | Msa0865520:intron | 35.0% |
| !!! | ATGTCTGGTTTTCCAACATA+TGG | + | chr5_4:66217750-66217769 | Msa0865520:intron | 35.0% |
| TAAGAGGACAAAATATGACG+AGG | - | chr5_4:66218120-66218139 | None:intergenic | 35.0% | |
| GAATGTCAGAAATATAGGTG+TGG | + | chr5_4:66218325-66218344 | Msa0865520:intron | 35.0% | |
| TTCCCGAGAAAGATGAAAAT+TGG | + | chr5_4:66218449-66218468 | Msa0865520:intron | 35.0% | |
| !!! | GGTTTTGGTTAGAATTTAGC+TGG | + | chr5_4:66218470-66218489 | Msa0865520:intron | 35.0% |
| ATACTTGATTTCGACACGTT+TGG | - | chr5_4:66218633-66218652 | None:intergenic | 35.0% | |
| TTAGAGCTTCACCAAAATCA+TGG | - | chr5_4:66218696-66218715 | None:intergenic | 35.0% | |
| ATAGAACGAAAGACATTGAG+CGG | - | chr5_4:66218836-66218855 | None:intergenic | 35.0% | |
| GTCTTTCGTTCTATATGTTC+AGG | + | chr5_4:66218842-66218861 | Msa0865520:intron | 35.0% | |
| CGATAATTGAAATGCAAGGT+TGG | - | chr5_4:66218894-66218913 | None:intergenic | 35.0% | |
| AAAGCAGAACACATACCTTT+GGG | - | chr5_4:66218936-66218955 | None:intergenic | 35.0% | |
| AAAAGCAGAACACATACCTT+TGG | - | chr5_4:66218937-66218956 | None:intergenic | 35.0% | |
| ! | ACAAAGGGCATATATACTAC+AGG | - | chr5_4:66219163-66219182 | None:intergenic | 35.0% |
| TCTATTCAATTTCAGTCGTG+TGG | + | chr5_4:66219190-66219209 | Msa0865520:intron | 35.0% | |
| AAAAAACAAACAGTCGCATC+AGG | - | chr5_4:66219216-66219235 | None:intergenic | 35.0% | |
| !! | TGGATTTGTTATTGTGGTTC+TGG | + | chr5_4:66219245-66219264 | Msa0865520:intron | 35.0% |
| ! | CTTCATCTCTTAGACTTGTT+TGG | + | chr5_4:66219290-66219309 | Msa0865520:intron | 35.0% |
| !!! | TTTTGGGTTGGTTTTTTTGG+TGG | + | chr5_4:66219350-66219369 | Msa0865520:intron | 35.0% |
| !!! | TTTGGGTTGGTTTTTTTGGT+GGG | + | chr5_4:66219351-66219370 | Msa0865520:intron | 35.0% |
| AACGCAAACCACATAGTATA+AGG | - | chr5_4:66219434-66219453 | None:intergenic | 35.0% | |
| AAACTTGTAGTGACTGACAT+TGG | + | chr5_4:66219652-66219671 | Msa0865520:intron | 35.0% | |
| TATTGTGTGCACTTACTGAA+TGG | - | chr5_4:66219820-66219839 | None:intergenic | 35.0% | |
| TCAGTAAGTGCACACAATAA+TGG | + | chr5_4:66219821-66219840 | Msa0865520:intron | 35.0% | |
| TGGTTAAGAGTCCAATTCTT+TGG | + | chr5_4:66219858-66219877 | Msa0865520:intron | 35.0% | |
| !! | GCGCTGATATTTTAAGCATA+GGG | + | chr5_4:66220027-66220046 | Msa0865520:intron | 35.0% |
| ATGTTTCTCTCTATGCTATC+TGG | + | chr5_4:66220113-66220132 | Msa0865520:intron | 35.0% | |
| TCTGTTGTAGGTTCAAAAAC+AGG | + | chr5_4:66220413-66220432 | Msa0865520:intron | 35.0% | |
| ATCACACCATTTCTTGAATC+GGG | - | chr5_4:66220469-66220488 | None:intergenic | 35.0% | |
| CATCACACCATTTCTTGAAT+CGG | - | chr5_4:66220470-66220489 | None:intergenic | 35.0% | |
| AAAGCAATGAATGAGCATTC+AGG | + | chr5_4:66220601-66220620 | Msa0865520:intron | 35.0% | |
| AAGCAATGAATGAGCATTCA+GGG | + | chr5_4:66220602-66220621 | Msa0865520:intron | 35.0% | |
| ATGAAACCAGTGTTTGTAGA+TGG | + | chr5_4:66220705-66220724 | Msa0865520:intron | 35.0% | |
| TGAAACCAGTGTTTGTAGAT+GGG | + | chr5_4:66220706-66220725 | Msa0865520:intron | 35.0% | |
| AGCAAGGATGTTTGTATGTT+AGG | + | chr5_4:66220730-66220749 | Msa0865520:intron | 35.0% | |
| GAATAACACCTGTGATGATT+GGG | + | chr5_4:66220770-66220789 | Msa0865520:intron | 35.0% | |
| ACCCATAAATCCTGAAATGA+AGG | + | chr5_4:66220980-66220999 | Msa0865520:intron | 35.0% | |
| GCCTTCATTTCAGGATTTAT+GGG | - | chr5_4:66220984-66221003 | None:intergenic | 35.0% | |
| TGCCTTCATTTCAGGATTTA+TGG | - | chr5_4:66220985-66221004 | None:intergenic | 35.0% | |
| ! | ATACACGAAACTGACTCAAT+TGG | - | chr5_4:66221136-66221155 | None:intergenic | 35.0% |
| CAGTTTCGTGTATACTTAGT+TGG | + | chr5_4:66221143-66221162 | Msa0865520:CDS | 35.0% | |
| GTGTATACTTAGTTGGATCA+TGG | + | chr5_4:66221150-66221169 | Msa0865520:CDS | 35.0% | |
| ACATGTTTGAGGGATTAAAG+TGG | + | chr5_4:66221183-66221202 | Msa0865520:CDS | 35.0% | |
| TTTCATGCTTGCCTAAACTA+TGG | + | chr5_4:66221458-66221477 | Msa0865520:intron | 35.0% | |
| ACCTATCATAGAGAAAAGGA+AGG | + | chr5_4:66221522-66221541 | Msa0865520:CDS | 35.0% | |
| ! | TCCTTCCTTTTCTCTATGAT+AGG | - | chr5_4:66221526-66221545 | None:intergenic | 35.0% |
| !!! | CTTATGTTGCCACTGTTTTT+TGG | + | chr5_4:66221682-66221701 | Msa0865520:intron | 35.0% |
| ! | TATGATAGGGGTACAACATT+TGG | + | chr5_4:66221714-66221733 | Msa0865520:CDS | 35.0% |
| ACATTTGGACTAAAAACTGG+AGG | + | chr5_4:66221729-66221748 | Msa0865520:CDS | 35.0% | |
| !!! | AGCTGTTTTAGCTTCCTATT+AGG | + | chr5_4:66222095-66222114 | Msa0865520:three_prime_UTR | 35.0% |
| !!! | TGTTTTAGCTTCCTATTAGG+TGG | + | chr5_4:66222098-66222117 | Msa0865520:three_prime_UTR | 35.0% |
| ATAGGTTCTTGAGGAACAAT+GGG | - | chr5_4:66222215-66222234 | None:intergenic | 35.0% | |
| TTGCATTAGATAGGTTCTTG+AGG | - | chr5_4:66222224-66222243 | None:intergenic | 35.0% | |
| ATAGGTTCTTGAGGAACAAT+GGG | - | chr5_4:66222215-66222234 | None:intergenic | 35.0% | |
| CAAAACCTATTCGGTTCAAT+AGG | + | chr5_4:66222432-66222451 | Msa0865520:three_prime_UTR | 35.0% | |
| AAGGAAGAGAAGAGAAAGAG+GGG | - | chr5_4:66215715-66215734 | None:intergenic | 40.0% | |
| GAAAGGAAGAGAAGAGAAAG+AGG | - | chr5_4:66215717-66215736 | None:intergenic | 40.0% | |
| ! | AAAGGAGTGATGGAGTAAGA+AGG | - | chr5_4:66215831-66215850 | None:intergenic | 40.0% |
| TGTGAATGTGAAAGGAGTGA+TGG | - | chr5_4:66215841-66215860 | None:intergenic | 40.0% | |
| ! | TGTGTAGTGAGTGATTTTGG+GGG | - | chr5_4:66215903-66215922 | None:intergenic | 40.0% |
| TTGAAAGTGGTGTGAAGATG+TGG | - | chr5_4:66215937-66215956 | None:intergenic | 40.0% | |
| !! | TTCTTCAAGATGGTGCTGTT+TGG | + | chr5_4:66216204-66216223 | Msa0865520:CDS | 40.0% |
| !! | TCTTCAAGATGGTGCTGTTT+GGG | + | chr5_4:66216205-66216224 | Msa0865520:CDS | 40.0% |
| CATCAAAAGAGAGAGAGCAA+TGG | - | chr5_4:66217432-66217451 | None:intergenic | 40.0% | |
| ATGTTGGGAAAACTGCCTTA+AGG | - | chr5_4:66217690-66217709 | None:intergenic | 40.0% | |
| TAGGATGCTGCAAGTATGTT+GGG | - | chr5_4:66217705-66217724 | None:intergenic | 40.0% | |
| ATAGGATGCTGCAAGTATGT+TGG | - | chr5_4:66217706-66217725 | None:intergenic | 40.0% | |
| ATGTTGGGAAAACTGCCTTA+AGG | - | chr5_4:66217690-66217709 | None:intergenic | 40.0% | |
| TAGGATGCTGCAAGTATGTT+GGG | - | chr5_4:66217705-66217724 | None:intergenic | 40.0% | |
| ATAGGATGCTGCAAGTATGT+TGG | - | chr5_4:66217706-66217725 | None:intergenic | 40.0% | |
| TCCTCTTACCCTATGAAACA+CGG | + | chr5_4:66218132-66218151 | Msa0865520:intron | 40.0% | |
| ACAAGTCCAAGTGTCAATGA+TGG | + | chr5_4:66218217-66218236 | Msa0865520:intron | 40.0% | |
| GGATCCACTAATGTTGACAA+AGG | - | chr5_4:66219142-66219161 | None:intergenic | 40.0% | |
| !! | GTTATTGTGGTTCTGGTGTT+TGG | + | chr5_4:66219252-66219271 | Msa0865520:intron | 40.0% |
| !! | GCAATCTTGTTCTTTTGGGT+TGG | + | chr5_4:66219338-66219357 | Msa0865520:intron | 40.0% |
| !!! | TTGGGTTGGTTTTTTTGGTG+GGG | + | chr5_4:66219352-66219371 | Msa0865520:intron | 40.0% |
| AGTGACTGACATTGGATAAC+AGG | + | chr5_4:66219660-66219679 | Msa0865520:intron | 40.0% | |
| CCAATAGAAGCAAACTCAAG+AGG | - | chr5_4:66219686-66219705 | None:intergenic | 40.0% | |
| ! | CCTCTTGAGTTTGCTTCTAT+TGG | + | chr5_4:66219683-66219702 | Msa0865520:intron | 40.0% |
| ! | ATTCATTTTGCAGATGCTCC+TGG | + | chr5_4:66219716-66219735 | Msa0865520:intron | 40.0% |
| AATGTAAGCAGGGGTTAAGT+CGG | - | chr5_4:66219774-66219793 | None:intergenic | 40.0% | |
| ! | AACCCCTGCTTACATTTTTG+AGG | + | chr5_4:66219778-66219797 | Msa0865520:CDS | 40.0% |
| CTCCTCAAAAATGTAAGCAG+GGG | - | chr5_4:66219783-66219802 | None:intergenic | 40.0% | |
| CCTCCTCAAAAATGTAAGCA+GGG | - | chr5_4:66219784-66219803 | None:intergenic | 40.0% | |
| TCCTCCTCAAAAATGTAAGC+AGG | - | chr5_4:66219785-66219804 | None:intergenic | 40.0% | |
| !!! | TCTGGTTTTGCAGTTTCAGA+TGG | + | chr5_4:66219957-66219976 | Msa0865520:intron | 40.0% |
| !!! | CTGGTTTTGCAGTTTCAGAT+GGG | + | chr5_4:66219958-66219977 | Msa0865520:intron | 40.0% |
| CTTGGTTCCTTTGATATGTG+TGG | + | chr5_4:66220005-66220024 | Msa0865520:intron | 40.0% | |
| !!! | GGCGCTGATATTTTAAGCAT+AGG | + | chr5_4:66220026-66220045 | Msa0865520:intron | 40.0% |
| GTAGGACAGTTGAGAAATTC+TGG | + | chr5_4:66220280-66220299 | Msa0865520:intron | 40.0% | |
| TTTCTTGAATCGGGGGTAAA+AGG | - | chr5_4:66220460-66220479 | None:intergenic | 40.0% | |
| TTTACCCCCGATTCAAGAAA+TGG | + | chr5_4:66220460-66220479 | Msa0865520:CDS | 40.0% | |
| TCACACCATTTCTTGAATCG+GGG | - | chr5_4:66220468-66220487 | None:intergenic | 40.0% | |
| GGAATAACACCTGTGATGAT+TGG | + | chr5_4:66220769-66220788 | Msa0865520:intron | 40.0% | |
| ! | AAATTCAGCACCGAGATGAA+AGG | + | chr5_4:66221290-66221309 | Msa0865520:intron | 40.0% |
| ATGCTTCTTTCCTTTGCTAC+TGG | + | chr5_4:66221364-66221383 | Msa0865520:CDS | 40.0% | |
| CAAGCAATTACCAGTAGCAA+AGG | - | chr5_4:66221377-66221396 | None:intergenic | 40.0% | |
| TCTGCAAGCAACCATAGTTT+AGG | - | chr5_4:66221472-66221491 | None:intergenic | 40.0% | |
| GCTTTCTGATGATCTGTGAA+GGG | - | chr5_4:66221553-66221572 | None:intergenic | 40.0% | |
| TGCTTTCTGATGATCTGTGA+AGG | - | chr5_4:66221554-66221573 | None:intergenic | 40.0% | |
| TCACAGATCATCAGAAAGCA+TGG | + | chr5_4:66221554-66221573 | Msa0865520:CDS | 40.0% | |
| ! | GCTCTATTCCTTTTCAGATC+AGG | + | chr5_4:66221653-66221672 | Msa0865520:intron | 40.0% |
| TTTGGCTGCAGGTATATGAT+AGG | + | chr5_4:66221700-66221719 | Msa0865520:intron | 40.0% | |
| TTGGCTGCAGGTATATGATA+GGG | + | chr5_4:66221701-66221720 | Msa0865520:intron | 40.0% | |
| AGATGCATGCATTAACCCAA+AGG | + | chr5_4:66221963-66221982 | Msa0865520:CDS | 40.0% | |
| CATGCATTAACCCAAAGGAA+TGG | + | chr5_4:66221968-66221987 | Msa0865520:CDS | 40.0% | |
| TATCAGTTGACCACCCAATT+TGG | + | chr5_4:66221999-66222018 | Msa0865520:three_prime_UTR | 40.0% | |
| GAAAAAGCTACCAAATTGGG+TGG | - | chr5_4:66222012-66222031 | None:intergenic | 40.0% | |
| GTTTAAACTGCACTGTACTG+TGG | + | chr5_4:66222174-66222193 | Msa0865520:intron | 40.0% | |
| ACAATGGGTAGTACAAAGAG+AGG | - | chr5_4:66222200-66222219 | None:intergenic | 40.0% | |
| GATAGGTTCTTGAGGAACAA+TGG | - | chr5_4:66222216-66222235 | None:intergenic | 40.0% | |
| GTTTAAACTGCACTGTACTG+TGG | + | chr5_4:66222174-66222193 | Msa0865520:intron | 40.0% | |
| ACAATGGGTAGTACAAAGAG+AGG | - | chr5_4:66222200-66222219 | None:intergenic | 40.0% | |
| GATAGGTTCTTGAGGAACAA+TGG | - | chr5_4:66222216-66222235 | None:intergenic | 40.0% | |
| GCGAAATAGATAGGTTCTTG+AGG | - | chr5_4:66222303-66222322 | None:intergenic | 40.0% | |
| GCAAACCTATTGAACCGAAT+AGG | - | chr5_4:66222440-66222459 | None:intergenic | 40.0% | |
| CACGGCATTGTAACGAGAAA+TGG | - | chr5_4:66215789-66215808 | None:intergenic | 45.0% | |
| ! | CTTCTCGAATCGAGCTCTAA+CGG | - | chr5_4:66216069-66216088 | None:intergenic | 45.0% |
| GCAATTGAAGAAGCTGATGG+TGG | + | chr5_4:66216122-66216141 | Msa0865520:CDS | 45.0% | |
| !! | ATTGAAGAAGCTGATGGTGG+TGG | + | chr5_4:66216125-66216144 | Msa0865520:CDS | 45.0% |
| GAAGATGTTTGGTCAAGACC+TGG | + | chr5_4:66216158-66216177 | Msa0865520:CDS | 45.0% | |
| TTAGCAGCACGATAAGCATC+AGG | - | chr5_4:66216275-66216294 | None:intergenic | 45.0% | |
| ! | GATGCTTATCGTGCTGCTAA+AGG | + | chr5_4:66216275-66216294 | Msa0865520:CDS | 45.0% |
| CTAATTCCGGCAGCGAAAAA+CGG | - | chr5_4:66216341-66216360 | None:intergenic | 45.0% | |
| TTAGTGACTAGGGGTCTGTT+TGG | - | chr5_4:66216890-66216909 | None:intergenic | 45.0% | |
| TTAGTCCCTGACGTCATATG+TGG | + | chr5_4:66216965-66216984 | Msa0865520:intron | 45.0% | |
| TTGAGCCACATATGACGTCA+GGG | - | chr5_4:66216973-66216992 | None:intergenic | 45.0% | |
| ATTGAGCCACATATGACGTC+AGG | - | chr5_4:66216974-66216993 | None:intergenic | 45.0% | |
| TCACTTGCACCATGTCCTTA+AGG | + | chr5_4:66217672-66217691 | Msa0865520:intron | 45.0% | |
| GGAAAACTGCCTTAAGGACA+TGG | - | chr5_4:66217684-66217703 | None:intergenic | 45.0% | |
| CTGCATGTGTTGTGTTCCAA+AGG | + | chr5_4:66217814-66217833 | Msa0865520:intron | 45.0% | |
| TCACTTGCACCATGTCCTTA+AGG | + | chr5_4:66217672-66217691 | Msa0865520:intron | 45.0% | |
| GGAAAACTGCCTTAAGGACA+TGG | - | chr5_4:66217684-66217703 | None:intergenic | 45.0% | |
| TCCGTGTTTCATAGGGTAAG+AGG | - | chr5_4:66218136-66218155 | None:intergenic | 45.0% | |
| TCCAGTGTCCGTGTTTCATA+GGG | - | chr5_4:66218143-66218162 | None:intergenic | 45.0% | |
| !! | CAAGTGTCAATGATGGACAC+CGG | + | chr5_4:66218224-66218243 | Msa0865520:intron | 45.0% |
| CGCTTGTTTATGCTCACTGA+TGG | + | chr5_4:66218413-66218432 | Msa0865520:intron | 45.0% | |
| !! | GTTGGGGCAAATGGGTTTTT+GGG | - | chr5_4:66218876-66218895 | None:intergenic | 45.0% |
| AATGCAAGGTTGGGGCAAAT+GGG | - | chr5_4:66218884-66218903 | None:intergenic | 45.0% | |
| AAATGCAAGGTTGGGGCAAA+TGG | - | chr5_4:66218885-66218904 | None:intergenic | 45.0% | |
| ! | TTTGAAACCGATGCTCCCAA+AGG | + | chr5_4:66218918-66218937 | Msa0865520:CDS | 45.0% |
| ! | ACACATACCTTTGGGAGCAT+CGG | - | chr5_4:66218928-66218947 | None:intergenic | 45.0% |
| !! | CCCTGCTTACATTTTTGAGG+AGG | + | chr5_4:66219781-66219800 | Msa0865520:CDS | 45.0% |
| ATCAGCGCCACACATATCAA+AGG | - | chr5_4:66220015-66220034 | None:intergenic | 45.0% | |
| !! | ATTCTTTTTGGGAAGGGGTG+CGG | - | chr5_4:66220226-66220245 | None:intergenic | 45.0% |
| TTGAATCGGGGGTAAAAGGT+AGG | - | chr5_4:66220456-66220475 | None:intergenic | 45.0% | |
| CACACCATTTCTTGAATCGG+GGG | - | chr5_4:66220467-66220486 | None:intergenic | 45.0% | |
| TGCTACCCATCTACAAACAC+TGG | - | chr5_4:66220714-66220733 | None:intergenic | 45.0% | |
| GTGTTTGTAGATGGGTAGCA+AGG | + | chr5_4:66220714-66220733 | Msa0865520:intron | 45.0% | |
| CACTATTGCCCAATCATCAC+AGG | - | chr5_4:66220781-66220800 | None:intergenic | 45.0% | |
| GGTAGTTTATGAGAAGAGCG+AGG | + | chr5_4:66220863-66220882 | Msa0865520:intron | 45.0% | |
| GCTTCATGTGCCTTCATTTC+AGG | - | chr5_4:66220993-66221012 | None:intergenic | 45.0% | |
| AATCCCTCAAACATGTCACG+CGG | - | chr5_4:66221179-66221198 | None:intergenic | 45.0% | |
| CAAGTCCTCTCCTTTCATCT+CGG | - | chr5_4:66221303-66221322 | None:intergenic | 45.0% | |
| AAGCATGGCAACAATTGCGA+AGG | + | chr5_4:66221569-66221588 | Msa0865520:CDS | 45.0% | |
| AGCATGGCAACAATTGCGAA+GGG | + | chr5_4:66221570-66221589 | Msa0865520:CDS | 45.0% | |
| TACCTGCAGCCAAAAAACAG+TGG | - | chr5_4:66221694-66221713 | None:intergenic | 45.0% | |
| TGGCTGCAGGTATATGATAG+GGG | + | chr5_4:66221702-66221721 | Msa0865520:intron | 45.0% | |
| TGTGTGCAGAAACCAGAAGT+AGG | + | chr5_4:66221919-66221938 | Msa0865520:intron | 45.0% | |
| CATTCTTCGCTTCCTACTTC+TGG | - | chr5_4:66221934-66221953 | None:intergenic | 45.0% | |
| CAGAAGTAGGAAGCGAAGAA+TGG | + | chr5_4:66221932-66221951 | Msa0865520:CDS | 45.0% | |
| ATGCCGCGGAGAAATGTATC+GGG | - | chr5_4:66216017-66216036 | None:intergenic | 50.0% | |
| GATGCCGCGGAGAAATGTAT+CGG | - | chr5_4:66216018-66216037 | None:intergenic | 50.0% | |
| GATGTTTGGTCAAGACCTGG+TGG | + | chr5_4:66216161-66216180 | Msa0865520:CDS | 50.0% | |
| !! | CCTATTCCGTTTTTCGCTGC+CGG | + | chr5_4:66216332-66216351 | Msa0865520:CDS | 50.0% |
| GACTAGGGGTCTGTTTGGAT+TGG | - | chr5_4:66216885-66216904 | None:intergenic | 50.0% | |
| AGAGACAATAGCAGCGACGT+AGG | + | chr5_4:66217147-66217166 | Msa0865520:intron | 50.0% | |
| GCTGCATGTGTTGTGTTCCA+TGG | + | chr5_4:66217813-66217832 | Msa0865520:intron | 50.0% | |
| ACCCTATGAAACACGGACAC+TGG | + | chr5_4:66218139-66218158 | Msa0865520:intron | 50.0% | |
| GTCCAGTGTCCGTGTTTCAT+AGG | - | chr5_4:66218144-66218163 | None:intergenic | 50.0% | |
| CTGGACACAACACATGACAC+CGG | + | chr5_4:66218158-66218177 | Msa0865520:intron | 50.0% | |
| CGGTGTCCATCATTGACACT+TGG | - | chr5_4:66218226-66218245 | None:intergenic | 50.0% | |
| ! | ACGGTGTGCGACCATGATTT+TGG | - | chr5_4:66218733-66218752 | None:intergenic | 50.0% |
| !! | GGTTGGGGCAAATGGGTTTT+TGG | - | chr5_4:66218877-66218896 | None:intergenic | 50.0% |
| ! | TCCATGTTTGCTGCTCTTCC+AGG | + | chr5_4:66219086-66219105 | Msa0865520:intron | 50.0% |
| TCCTGGAAGAGCAGCAAACA+TGG | - | chr5_4:66219090-66219109 | None:intergenic | 50.0% | |
| GCACCTAGACAATGGTGGTT+CGG | + | chr5_4:66219740-66219759 | Msa0865520:CDS | 50.0% | |
| !! | CTAGACAATGGTGGTTCGGT+GGG | + | chr5_4:66219744-66219763 | Msa0865520:CDS | 50.0% |
| !! | TAGACAATGGTGGTTCGGTG+GGG | + | chr5_4:66219745-66219764 | Msa0865520:CDS | 50.0% |
| TTGCCGCGTGACATGTTTGA+GGG | + | chr5_4:66221173-66221192 | Msa0865520:CDS | 50.0% | |
| CGAGATGAAAGGAGAGGACT+TGG | + | chr5_4:66221301-66221320 | Msa0865520:CDS | 50.0% | |
| GATGAAAGGAGAGGACTTGG+AGG | + | chr5_4:66221304-66221323 | Msa0865520:CDS | 50.0% | |
| GCATGGCAACAATTGCGAAG+GGG | + | chr5_4:66221571-66221590 | Msa0865520:CDS | 50.0% | |
| !!! | TGCCACTGTTTTTTGGCTGC+AGG | + | chr5_4:66221689-66221708 | Msa0865520:intron | 50.0% |
| ! | TTTCTCTCCCACTGACTGCT+CGG | + | chr5_4:66221772-66221791 | Msa0865520:CDS | 50.0% |
| ! | GTATCGGGGCGTTCTGATTC+TGG | - | chr5_4:66216002-66216021 | None:intergenic | 55.0% |
| TGCCGCGGAGAAATGTATCG+GGG | - | chr5_4:66216016-66216035 | None:intergenic | 55.0% | |
| ! | AGCTCTAACGGAAGATGCCG+CGG | - | chr5_4:66216057-66216076 | None:intergenic | 55.0% |
| GTTTGGTCAAGACCTGGTGG+TGG | + | chr5_4:66216164-66216183 | Msa0865520:CDS | 55.0% | |
| !! | GGTGCTGTTTGGGAGAAAGC+TGG | + | chr5_4:66216215-66216234 | Msa0865520:CDS | 55.0% |
| GCAGCACGATAAGCATCAGG+TGG | - | chr5_4:66216272-66216291 | None:intergenic | 55.0% | |
| CTTCTGATCACTGGAACCCG+CGG | - | chr5_4:66216306-66216325 | None:intergenic | 55.0% | |
| GGGTTCCAGTGATCAGAAGC+CGG | + | chr5_4:66216307-66216326 | Msa0865520:CDS | 55.0% | |
| GGTTCCAGTGATCAGAAGCC+GGG | + | chr5_4:66216308-66216327 | Msa0865520:CDS | 55.0% | |
| GTTCCAGTGATCAGAAGCCG+GGG | + | chr5_4:66216309-66216328 | Msa0865520:CDS | 55.0% | |
| GCGAAAAACGGAATAGGCCC+CGG | - | chr5_4:66216329-66216348 | None:intergenic | 55.0% | |
| CCGGCAGCGAAAAACGGAAT+AGG | - | chr5_4:66216335-66216354 | None:intergenic | 55.0% | |
| AGTGTTTGCTTGGTTGCGCG+TGG | + | chr5_4:66217262-66217281 | Msa0865520:intron | 55.0% | |
| GAGGCAGACTGTTAACGCCA+TGG | - | chr5_4:66218101-66218120 | None:intergenic | 55.0% | |
| ACACCCCTGGGATGAAGTGT+CGG | + | chr5_4:66218247-66218266 | Msa0865520:intron | 55.0% | |
| !! | AGCACCGACACTTCATCCCA+GGG | - | chr5_4:66218254-66218273 | None:intergenic | 55.0% |
| !! | AAGCACCGACACTTCATCCC+AGG | - | chr5_4:66218255-66218274 | None:intergenic | 55.0% |
| ! | CTCCTGGAGCACCTAGACAA+TGG | + | chr5_4:66219732-66219751 | Msa0865520:CDS | 55.0% |
| CACCATTGTCTAGGTGCTCC+AGG | - | chr5_4:66219737-66219756 | None:intergenic | 55.0% | |
| ! | CTGGAGCACCTAGACAATGG+TGG | + | chr5_4:66219735-66219754 | Msa0865520:CDS | 55.0% |
| CCACCGAACCACCATTGTCT+AGG | - | chr5_4:66219746-66219765 | None:intergenic | 55.0% | |
| ! | CCTAGACAATGGTGGTTCGG+TGG | + | chr5_4:66219743-66219762 | Msa0865520:CDS | 55.0% |
| !! | AGACAATGGTGGTTCGGTGG+GGG | + | chr5_4:66219746-66219765 | Msa0865520:CDS | 55.0% |
| ! | GGAAGGGGTGCGGATGTAAA+AGG | - | chr5_4:66220216-66220235 | None:intergenic | 55.0% |
| GTTGCCGCGTGACATGTTTG+AGG | + | chr5_4:66221172-66221191 | Msa0865520:CDS | 55.0% | |
| ! | CAGCACCGAGATGAAAGGAG+AGG | + | chr5_4:66221295-66221314 | Msa0865520:intron | 55.0% |
| ATTCCCACCGAGCAGTCAGT+GGG | - | chr5_4:66221782-66221801 | None:intergenic | 55.0% | |
| TATTCCCACCGAGCAGTCAG+TGG | - | chr5_4:66221783-66221802 | None:intergenic | 55.0% | |
| CGCCCCGATACATTTCTCCG+CGG | + | chr5_4:66216011-66216030 | Msa0865520:CDS | 60.0% | |
| TCTAACGGAAGATGCCGCGG+TGG | - | chr5_4:66216054-66216073 | None:intergenic | 60.0% | |
| !! | TGGTCAAGACCTGGTGGTGG+TGG | + | chr5_4:66216167-66216186 | Msa0865520:CDS | 60.0% |
| !! | TCAAGACCTGGTGGTGGTGG+TGG | + | chr5_4:66216170-66216189 | Msa0865520:CDS | 60.0% |
| !! | CAAGACCTGGTGGTGGTGGT+GGG | + | chr5_4:66216171-66216190 | Msa0865520:CDS | 60.0% |
| CTAATCCCACCACCACCACC+AGG | - | chr5_4:66216179-66216198 | None:intergenic | 60.0% | |
| !! | CACTTCATCCCAGGGGTGTC+CGG | - | chr5_4:66218246-66218265 | None:intergenic | 60.0% |
| ! | GCACCGACACTTCATCCCAG+GGG | - | chr5_4:66218253-66218272 | None:intergenic | 60.0% |
| ! | TCTCCCACTGACTGCTCGGT+GGG | + | chr5_4:66221776-66221795 | Msa0865520:CDS | 60.0% |
| !! | CTCCGCGGCATCGACAACGA+CGG | + | chr5_4:66216026-66216045 | Msa0865520:CDS | 65.0% |
| CTCCGTCGTTGTCGATGCCG+CGG | - | chr5_4:66216031-66216050 | None:intergenic | 65.0% | |
| !! | TGCTGCTAAAGGCGCTGCCG+CGG | + | chr5_4:66216286-66216305 | Msa0865520:CDS | 65.0% |
| AGGCCCCGGCTTCTGATCAC+TGG | - | chr5_4:66216315-66216334 | None:intergenic | 65.0% | |
| ! | TGATGGACACCGGACACCCC+TGG | + | chr5_4:66218234-66218253 | Msa0865520:intron | 65.0% |
| GATGGACACCGGACACCCCT+GGG | + | chr5_4:66218235-66218254 | Msa0865520:intron | 65.0% | |
| ! | CTCTCCCACTGACTGCTCGG+TGG | + | chr5_4:66221775-66221794 | Msa0865520:CDS | 65.0% |
| CGACAACGACGGAGCCACCG+CGG | + | chr5_4:66216037-66216056 | Msa0865520:CDS | 70.0% | |
| !! | GCTGCTAAAGGCGCTGCCGC+GGG | + | chr5_4:66216287-66216306 | Msa0865520:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 66215639 | 66222501 | 66215639 | ID=Msa0865520;Name=Msa0865520 |
| chr5_4 | mRNA | 66215639 | 66222501 | 66215639 | ID=Msa0865520-mRNA-1;Parent=Msa0865520;Name=Msa0865520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=162|0.77|0.9|0.9|0.88|0.8|10|433|432 |
| chr5_4 | exon | 66215639 | 66216364 | 66215639 | ID=Msa0865520-mRNA-1:exon:20932;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66218864 | 66218939 | 66218864 | ID=Msa0865520-mRNA-1:exon:20933;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66219729 | 66219823 | 66219729 | ID=Msa0865520-mRNA-1:exon:20934;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66220423 | 66220506 | 66220423 | ID=Msa0865520-mRNA-1:exon:20935;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66221113 | 66221211 | 66221113 | ID=Msa0865520-mRNA-1:exon:20936;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66221298 | 66221385 | 66221298 | ID=Msa0865520-mRNA-1:exon:20937;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66221491 | 66221615 | 66221491 | ID=Msa0865520-mRNA-1:exon:20938;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66221711 | 66221809 | 66221711 | ID=Msa0865520-mRNA-1:exon:20939;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66221928 | 66222171 | 66221928 | ID=Msa0865520-mRNA-1:exon:20940;Parent=Msa0865520-mRNA-1 |
| chr5_4 | exon | 66222244 | 66222501 | 66222244 | ID=Msa0865520-mRNA-1:exon:20941;Parent=Msa0865520-mRNA-1 |
| chr5_4 | five_prime_UTR | 66215639 | 66215800 | 66215639 | ID=Msa0865520-mRNA-1:five_prime_utr;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66215801 | 66216364 | 66215801 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66218864 | 66218939 | 66218864 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66219729 | 66219823 | 66219729 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66220423 | 66220506 | 66220423 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66221113 | 66221211 | 66221113 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66221298 | 66221385 | 66221298 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66221491 | 66221615 | 66221491 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66221711 | 66221809 | 66221711 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | CDS | 66221928 | 66221996 | 66221928 | ID=Msa0865520-mRNA-1:cds;Parent=Msa0865520-mRNA-1 |
| chr5_4 | three_prime_UTR | 66221997 | 66222171 | 66221997 | ID=Msa0865520-mRNA-1:three_prime_utr;Parent=Msa0865520-mRNA-1 |
| chr5_4 | three_prime_UTR | 66222244 | 66222501 | 66222244 | ID=Msa0865520-mRNA-1:three_prime_utr;Parent=Msa0865520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
