Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374340 | XP_003602068.1 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374340 | sp|P30124|HEM2_PEA | 94.472 | 398 | 21 | 1 | 17 | 413 | 1 | 398 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374340 | G7J506 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034480 | Msa0374340 | -0.800457 | 1.428195e-48 | -8.615850e-47 |
| Msa0035050 | Msa0374340 | 0.818890 | 1.547738e-52 | -8.615850e-47 |
| Msa0043850 | Msa0374340 | -0.827073 | 1.913571e-54 | -8.615850e-47 |
| Msa0054920 | Msa0374340 | -0.809903 | 1.503254e-50 | -8.615850e-47 |
| Msa0072600 | Msa0374340 | 0.847398 | 1.186385e-59 | -8.615850e-47 |
| Msa0077370 | Msa0374340 | -0.803056 | 4.182004e-49 | -8.615850e-47 |
| Msa0082230 | Msa0374340 | -0.837225 | 5.892356e-57 | -8.615850e-47 |
| Msa0082420 | Msa0374340 | -0.827408 | 1.590752e-54 | -8.615850e-47 |
| Msa0090510 | Msa0374340 | -0.864204 | 1.438534e-64 | -8.615850e-47 |
| Msa0093950 | Msa0374340 | 0.808937 | 2.423327e-50 | -8.615850e-47 |
| Msa0099910 | Msa0374340 | -0.833466 | 5.248549e-56 | -8.615850e-47 |
| Msa0100290 | Msa0374340 | -0.800621 | 1.322482e-48 | -8.615850e-47 |
| Msa0101960 | Msa0374340 | -0.807845 | 4.142017e-50 | -8.615850e-47 |
| Msa0108760 | Msa0374340 | -0.802816 | 4.688907e-49 | -8.615850e-47 |
| Msa0114790 | Msa0374340 | -0.805400 | 1.359536e-49 | -8.615850e-47 |
| Msa0115790 | Msa0374340 | -0.807029 | 6.172164e-50 | -8.615850e-47 |
| Msa0117520 | Msa0374340 | -0.802547 | 5.328340e-49 | -8.615850e-47 |
| Msa0124930 | Msa0374340 | -0.804458 | 2.139938e-49 | -8.615850e-47 |
| Msa0137980 | Msa0374340 | -0.820502 | 6.630272e-53 | -8.615850e-47 |
| Msa0139550 | Msa0374340 | 0.848482 | 5.958535e-60 | -8.615850e-47 |
| Msa0144530 | Msa0374340 | -0.810599 | 1.063833e-50 | -8.615850e-47 |
| Msa0160960 | Msa0374340 | -0.822718 | 2.038903e-53 | -8.615850e-47 |
| Msa0183910 | Msa0374340 | -0.846131 | 2.633485e-59 | -8.615850e-47 |
| Msa0187590 | Msa0374340 | 0.805171 | 1.518490e-49 | -8.615850e-47 |
| Msa0216850 | Msa0374340 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0220400 | Msa0374340 | 0.836164 | 1.098868e-56 | -8.615850e-47 |
| Msa0234410 | Msa0374340 | 0.834377 | 3.104028e-56 | -8.615850e-47 |
| Msa0367540 | Msa0374340 | 0.808714 | 2.704481e-50 | -8.615850e-47 |
| Msa0370580 | Msa0374340 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0374340 | Msa0374420 | 0.996065 | 5.299904e-223 | -8.615850e-47 |
| Msa0374340 | Msa0383870 | 0.836039 | 1.181962e-56 | -8.615850e-47 |
| Msa0374340 | Msa0386940 | -0.803677 | 3.109837e-49 | -8.615850e-47 |
| Msa0374340 | Msa0388730 | -0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0374340 | Msa0403470 | 0.897809 | 9.806441e-77 | -8.615850e-47 |
| Msa0374340 | Msa0403480 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0374340 | Msa0415160 | 0.820245 | 7.593724e-53 | -8.615850e-47 |
| Msa0374340 | Msa0428200 | -0.829368 | 5.353772e-55 | -8.615850e-47 |
| Msa0374340 | Msa0469870 | 0.890101 | 1.335333e-73 | -8.615850e-47 |
| Msa0374340 | Msa0476170 | 0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa0374340 | Msa0480090 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0374340 | Msa0500700 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa0374340 | Msa0510710 | 0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0374340 | Msa0515440 | 0.948872 | 3.971934e-107 | -8.615850e-47 |
| Msa0374340 | Msa0518170 | -0.804594 | 2.004270e-49 | -8.615850e-47 |
| Msa0374340 | Msa0529780 | 0.825273 | 5.128395e-54 | -8.615850e-47 |
| Msa0374340 | Msa0544160 | -0.805165 | 1.523106e-49 | -8.615850e-47 |
| Msa0374340 | Msa0545050 | -0.813617 | 2.337507e-51 | -8.615850e-47 |
| Msa0374340 | Msa0548650 | 0.855031 | 8.283396e-62 | -8.615850e-47 |
| Msa0374340 | Msa0566120 | 0.801659 | 8.110215e-49 | -8.615850e-47 |
| Msa0374340 | Msa0572550 | 0.819627 | 1.051697e-52 | -8.615850e-47 |
| Msa0374340 | Msa0574930 | -0.807590 | 4.692237e-50 | -8.615850e-47 |
| Msa0374340 | Msa0576120 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0374340 | Msa0589260 | 0.835531 | 1.589282e-56 | -8.615850e-47 |
| Msa0374340 | Msa0594050 | -0.800323 | 1.520931e-48 | -8.615850e-47 |
| Msa0374340 | Msa0600590 | -0.800862 | 1.180847e-48 | -8.615850e-47 |
| Msa0374340 | Msa0603690 | 0.800083 | 1.702348e-48 | -8.615850e-47 |
| Msa0374340 | Msa0611540 | 0.813419 | 2.584290e-51 | -8.615850e-47 |
| Msa0374340 | Msa0637930 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0374340 | Msa0641130 | -0.804810 | 1.806756e-49 | -8.615850e-47 |
| Msa0374340 | Msa0703810 | -0.805600 | 1.234475e-49 | -8.615850e-47 |
| Msa0374340 | Msa0745250 | 0.830797 | 2.398672e-55 | -8.615850e-47 |
| Msa0374340 | Msa0781330 | 0.827015 | 1.975621e-54 | -8.615850e-47 |
| Msa0374340 | Msa0796580 | 0.803663 | 3.130492e-49 | -8.615850e-47 |
| Msa0374340 | Msa0823540 | -0.811145 | 8.105583e-51 | -8.615850e-47 |
| Msa0374340 | Msa0826800 | 0.827356 | 1.636513e-54 | -8.615850e-47 |
| Msa0374340 | Msa0865520 | 0.805214 | 1.487466e-49 | -8.615850e-47 |
| Msa0374340 | Msa0878220 | -0.806227 | 9.113140e-50 | -8.615850e-47 |
| Msa0374340 | Msa0881530 | 0.830546 | 2.762826e-55 | -8.615850e-47 |
| Msa0374340 | Msa0944020 | -0.833925 | 4.028877e-56 | -8.615850e-47 |
| Msa0374340 | Msa0960880 | 0.803437 | 3.488386e-49 | -8.615850e-47 |
| Msa0374340 | Msa0968470 | 0.901435 | 2.687782e-78 | -8.615850e-47 |
| Msa0374340 | Msa0982090 | 0.835373 | 1.743082e-56 | -8.615850e-47 |
| Msa0374340 | Msa1031460 | -0.820742 | 5.841829e-53 | -8.615850e-47 |
| Msa0374340 | Msa1061740 | -0.815574 | 8.622409e-52 | -8.615850e-47 |
| Msa0374340 | Msa1062040 | -0.836079 | 1.154359e-56 | -8.615850e-47 |
| Msa0374340 | Msa1070540 | -0.831942 | 1.253870e-55 | -8.615850e-47 |
| Msa0374340 | Msa1079720 | 0.857496 | 1.568734e-62 | -8.615850e-47 |
| Msa0374340 | Msa1080610 | 0.801118 | 1.047021e-48 | -8.615850e-47 |
| Msa0374340 | Msa1080680 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0374340 | Msa1101240 | -0.833268 | 5.881043e-56 | -8.615850e-47 |
| Msa0374340 | Msa1107200 | -0.815159 | 1.066106e-51 | -8.615850e-47 |
| Msa0374340 | Msa1122150 | -0.804632 | 1.968215e-49 | -8.615850e-47 |
| Msa0374340 | Msa1124530 | 0.872396 | 3.285500e-67 | -8.615850e-47 |
| Msa0374340 | Msa1129300 | 0.823914 | 1.071561e-53 | -8.615850e-47 |
| Msa0374340 | Msa1137780 | -0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0374340 | Msa1150780 | -0.825180 | 5.394630e-54 | -8.615850e-47 |
| Msa0374340 | Msa1152780 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa0374340 | Msa1158390 | -0.800397 | 1.469423e-48 | -8.615850e-47 |
| Msa0374340 | Msa1167150 | 0.807120 | 5.901702e-50 | -8.615850e-47 |
| Msa0374340 | Msa1183140 | -0.812650 | 3.811185e-51 | -8.615850e-47 |
| Msa0374340 | Msa1190100 | 0.831755 | 1.394131e-55 | -8.615850e-47 |
| Msa0374340 | Msa1208450 | 0.883964 | 2.872601e-71 | -8.615850e-47 |
| Msa0374340 | Msa1209870 | 0.805047 | 1.611533e-49 | -8.615850e-47 |
| Msa0374340 | Msa1211060 | 0.802933 | 4.434823e-49 | -8.615850e-47 |
| Msa0374340 | Msa1229480 | -0.829212 | 5.841167e-55 | -8.615850e-47 |
| Msa0374340 | Msa1236440 | -0.806649 | 7.422788e-50 | -8.615850e-47 |
| Msa0374340 | Msa1258030 | 0.837912 | 3.928897e-57 | -8.615850e-47 |
| Msa0374340 | Msa1272010 | -0.825459 | 4.635069e-54 | -8.615850e-47 |
| Msa0374340 | Msa1277410 | -0.800148 | 1.650940e-48 | -8.615850e-47 |
| Msa0374340 | Msa1277670 | -0.811511 | 6.750117e-51 | -8.615850e-47 |
| Msa0374340 | Msa1298390 | 0.896668 | 2.957947e-76 | -8.615850e-47 |
| Msa0374340 | Msa1307160 | -0.802084 | 6.635283e-49 | -8.615850e-47 |
| Msa0374340 | Msa1307180 | -0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0374340 | Msa1316360 | -0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa0374340 | Msa1325410 | 0.840157 | 1.029491e-57 | -8.615850e-47 |
| Msa0374340 | Msa1330540 | 0.806497 | 7.993347e-50 | -8.615850e-47 |
| Msa0374340 | Msa1341060 | -0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0374340 | Msa1346840 | -0.825114 | 5.591087e-54 | -8.615850e-47 |
| Msa0374340 | Msa1359400 | -0.818051 | 2.398504e-52 | -8.615850e-47 |
| Msa0374340 | Msa1363820 | 0.802070 | 6.678950e-49 | -8.615850e-47 |
| Msa0374340 | Msa1364350 | 0.837466 | 5.113228e-57 | -8.615850e-47 |
| Msa0374340 | Msa1369920 | 0.868518 | 6.153652e-66 | -8.615850e-47 |
| Msa0374340 | Msa1375610 | 0.809110 | 2.224336e-50 | -8.615850e-47 |
| Msa0374340 | Msa1376550 | 0.801882 | 7.299171e-49 | -8.615850e-47 |
| Msa0374340 | Msa1382380 | 0.834191 | 3.456430e-56 | -8.615850e-47 |
| Msa0374340 | Msa1407760 | -0.821677 | 3.554786e-53 | -8.615850e-47 |
| Msa0374340 | Msa1407880 | -0.812573 | 3.960075e-51 | -8.615850e-47 |
| Msa0374340 | Msa1419840 | -0.823073 | 1.685668e-53 | -8.615850e-47 |
| Msa0374340 | Msa1437730 | -0.812998 | 3.197777e-51 | -8.615850e-47 |
| Msa0296050 | Msa0374340 | 0.823836 | 1.117693e-53 | -8.615850e-47 |
| Msa0302840 | Msa0374340 | -0.809183 | 2.145603e-50 | -8.615850e-47 |
| Msa0305410 | Msa0374340 | -0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0318680 | Msa0374340 | -0.816633 | 5.000536e-52 | -8.615850e-47 |
| Msa0333970 | Msa0374340 | 0.820050 | 8.417094e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374340 | MtrunA17_Chr3g0124871 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374340 | AT1G69740.1 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374340 | AT1G69740.3 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374340 | AT1G69740.2 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374340 | AT1G44318.1 | 70.739 | 352 | 94 | 2 | 62 | 413 | 59 | 401 | 0.0 | 514 |
Find 137 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAAGCATCTGGAATTT+TGG | 0.073758 | 3_1:-73778887 | None:intergenic |
| CTTTATTCACAACAGGTTTC+TGG | 0.142989 | 3_1:+73781774 | Msa0374340:intron |
| GAAGCCTGGGCTTCCTTATT+TGG | 0.157019 | 3_1:+73780985 | Msa0374340:CDS |
| CATTGAGCTCTCTGGCCTTC+TGG | 0.170414 | 3_1:-73781988 | None:intergenic |
| TCAATCTCCGATTACGATTA+TGG | 0.171474 | 3_1:+73777464 | Msa0374340:exon |
| TACACATCGATCCGCGTTTC+AGG | 0.190551 | 3_1:+73777883 | Msa0374340:CDS |
| GAGTCCAATGCTTCCCTAAA+TGG | 0.193544 | 3_1:-73780656 | None:intergenic |
| AAGATAAGTTATTATTATTA+AGG | 0.197659 | 3_1:-73777327 | None:intergenic |
| ATTCAGTTTCACCTCCTTAT+TGG | 0.222175 | 3_1:+73777358 | Msa0374340:five_prime_UTR |
| TTACACCATTTGTAAGATAA+TGG | 0.240086 | 3_1:-73782085 | None:intergenic |
| GTGAGATTCTTCAAACATTT+AGG | 0.248335 | 3_1:+73781953 | Msa0374340:exon |
| AACGTTGGTGTGTGAATTTA+AGG | 0.252371 | 3_1:-73777520 | None:intergenic |
| TCATGCCCATCTGAAGAATA+TGG | 0.266166 | 3_1:-73779192 | None:intergenic |
| ATTGAGCTCTCTGGCCTTCT+GGG | 0.311835 | 3_1:-73781987 | None:intergenic |
| TTTAAGGTTAAGGGTGTGTT+TGG | 0.329848 | 3_1:-73777504 | None:intergenic |
| TACACCATTTGTAAGATAAT+GGG | 0.335377 | 3_1:-73782084 | None:intergenic |
| CGACGAGGACGCCTCTGAAT+TGG | 0.335567 | 3_1:-73777845 | None:intergenic |
| TGGTGAGTACTCGATGATTA+AGG | 0.335831 | 3_1:+73781794 | Msa0374340:CDS |
| CAAAATTCCAGATGCTTTGA+AGG | 0.350403 | 3_1:+73778888 | Msa0374340:CDS |
| GTGTGTGAATTTAAGGTTAA+GGG | 0.356716 | 3_1:-73777513 | None:intergenic |
| AGCCTTATGATATCCAAATA+AGG | 0.360550 | 3_1:-73780998 | None:intergenic |
| AAAGCCTCTCTGTAGTTTGC+CGG | 0.370396 | 3_1:-73780819 | None:intergenic |
| TTCCTTATTTGGATATCATA+AGG | 0.373814 | 3_1:+73780996 | Msa0374340:CDS |
| TCTCTTGTTCGTTTCACGTT+CGG | 0.386854 | 3_1:-73777102 | None:intergenic |
| CTGTGTTCACTTACAAGATC+AGG | 0.387731 | 3_1:-73779063 | None:intergenic |
| AAACTAGATAACAACCAATA+AGG | 0.389704 | 3_1:-73777372 | None:intergenic |
| GAAGAGAAAAGGAACGTTGC+TGG | 0.392659 | 3_1:+73777123 | Msa0374340:five_prime_UTR |
| AATAGAACCTTCAAAGCATC+TGG | 0.395086 | 3_1:-73778895 | None:intergenic |
| GAAATTGAATAAAATTTGTC+TGG | 0.395890 | 3_1:+73777270 | Msa0374340:five_prime_UTR |
| TCATAAACATTTACCGCAAA+AGG | 0.396182 | 3_1:-73782200 | None:intergenic |
| TGTCAGCACCGGCACGTCTA+AGG | 0.398953 | 3_1:-73781875 | None:intergenic |
| TCTATATGACAGAAGGCTAA+TGG | 0.402425 | 3_1:-73782224 | None:intergenic |
| CTTGTAGAGCAAAATATGTT+AGG | 0.407581 | 3_1:-73781902 | None:intergenic |
| CCTACACCGGCTGCACCTGC+TGG | 0.413535 | 3_1:+73777693 | Msa0374340:CDS |
| CATCCGGGCATAGCACCAAT+TGG | 0.415152 | 3_1:-73778240 | None:intergenic |
| GGCGGTACAGGAGGCGCATC+CGG | 0.419126 | 3_1:-73777672 | None:intergenic |
| GCAGCCGGTGTAGGCGGTAC+AGG | 0.421060 | 3_1:-73777684 | None:intergenic |
| AGTCCAATGCTTCCCTAAAT+GGG | 0.431083 | 3_1:-73780655 | None:intergenic |
| AGAAGGAGCTGATATTCTAT+TGG | 0.434691 | 3_1:+73780866 | Msa0374340:CDS |
| TTAGCCTTCTGTCATATAGA+AGG | 0.436080 | 3_1:+73782227 | Msa0374340:three_prime_UTR |
| TAGTTCTTCAATGGTAGTGC+TGG | 0.437216 | 3_1:-73777552 | None:intergenic |
| ATCCGGGCATAGCACCAATT+GGG | 0.443550 | 3_1:-73778239 | None:intergenic |
| GAAGAAGCCATAATCGTAAT+CGG | 0.444487 | 3_1:-73777471 | None:intergenic |
| TTCGAAGCCGCTGTTGTCGC+TGG | 0.446142 | 3_1:+73777642 | Msa0374340:CDS |
| TCAACCCATTATCTTACAAA+TGG | 0.451285 | 3_1:+73782080 | Msa0374340:three_prime_UTR |
| GTCAAATGCATTGAGCTCTC+TGG | 0.453896 | 3_1:-73781996 | None:intergenic |
| CCAACCAAGCCTGTAGCATC+CGG | 0.454753 | 3_1:-73778256 | None:intergenic |
| TAAAATGATTGATGAAGAAA+AGG | 0.462660 | 3_1:+73781830 | Msa0374340:CDS |
| TGGCCCATTTAGGGAAGCAT+TGG | 0.464040 | 3_1:+73780652 | Msa0374340:CDS |
| TCGAACTATACGATTACTTA+AGG | 0.469401 | 3_1:+73779032 | Msa0374340:CDS |
| AGAACCTGGTATGCTGCAAT+TGG | 0.471730 | 3_1:-73781043 | None:intergenic |
| TAGTTGGTGAAGGGTAGAAA+TGG | 0.472186 | 3_1:+73777248 | Msa0374340:five_prime_UTR |
| TTGCATGTGCAGGTGAAGCC+TGG | 0.473131 | 3_1:+73780971 | Msa0374340:intron |
| CCAGCAGGTGCAGCCGGTGT+AGG | 0.473347 | 3_1:-73777693 | None:intergenic |
| GGCGTTCCAGCAGGTGCAGC+CGG | 0.474188 | 3_1:-73777699 | None:intergenic |
| TTGTATGCCTCATCTCCTGT+GGG | 0.474392 | 3_1:-73778991 | None:intergenic |
| GGTGAGGAGGACACCCCAAT+TGG | 0.474774 | 3_1:+73778225 | Msa0374340:intron |
| GTCACCACTGGCGTTCCAGC+AGG | 0.476216 | 3_1:-73777708 | None:intergenic |
| GTGCTATGCCCGGATGCTAC+AGG | 0.477134 | 3_1:+73778247 | Msa0374340:CDS |
| ACCCCAATTGGTGCTATGCC+CGG | 0.482806 | 3_1:+73778237 | Msa0374340:CDS |
| GACCACATCTGCTCCAGCAC+GGG | 0.485822 | 3_1:-73779896 | None:intergenic |
| GGCTTCGAAATCTGCATCAC+TGG | 0.486265 | 3_1:-73777628 | None:intergenic |
| TTCTAGTTATTCTGCTGTTG+AGG | 0.493613 | 3_1:-73782146 | None:intergenic |
| GGTGTGTGAATTTAAGGTTA+AGG | 0.494498 | 3_1:-73777514 | None:intergenic |
| AACGAACAAGAGAAGAGAAA+AGG | 0.497772 | 3_1:+73777112 | Msa0374340:five_prime_UTR |
| AAGCCTCTCTGTAGTTTGCC+GGG | 0.500631 | 3_1:-73780818 | None:intergenic |
| AAGCTCAAATAGTTCTTCAA+TGG | 0.500921 | 3_1:-73777561 | None:intergenic |
| TGATGAAGAAAAGGTGATGA+TGG | 0.507074 | 3_1:+73781839 | Msa0374340:CDS |
| CGACCATCCATCATATCGCT+GGG | 0.509074 | 3_1:-73779922 | None:intergenic |
| GACGGCATTGTTAGAGAAGA+TGG | 0.510196 | 3_1:+73779213 | Msa0374340:CDS |
| CATGCCCATCTGAAGAATAT+GGG | 0.510541 | 3_1:-73779191 | None:intergenic |
| ACGACCATCCATCATATCGC+TGG | 0.517199 | 3_1:-73779923 | None:intergenic |
| AGTGGATAAACAAAATTAGC+AGG | 0.519439 | 3_1:-73777920 | None:intergenic |
| TTAAGTAATCGTATAGTTCG+AGG | 0.519833 | 3_1:-73779030 | None:intergenic |
| GAACAAGTACGCACGGGACA+TGG | 0.523078 | 3_1:-73777303 | None:intergenic |
| CGAGCAGCTCTCGATGCTGA+AGG | 0.524524 | 3_1:+73779958 | Msa0374340:CDS |
| GCTGCCAATTGCAGCATACC+AGG | 0.526983 | 3_1:+73781039 | Msa0374340:CDS |
| GGCCCGTGCTGGAGCAGATG+TGG | 0.528623 | 3_1:+73779894 | Msa0374340:intron |
| CTCGATGATTAAGGCTGGTG+GGG | 0.530917 | 3_1:+73781803 | Msa0374340:CDS |
| TGACCGACTTGCAGAATAGT+TGG | 0.533237 | 3_1:+73777232 | Msa0374340:five_prime_UTR |
| TGACCACATCTGCTCCAGCA+CGG | 0.535344 | 3_1:-73779897 | None:intergenic |
| TAATTCAGGTTGCAAAAGCA+CGG | 0.536608 | 3_1:+73778833 | Msa0374340:intron |
| GTTGCAAAAGCACGGGATGT+TGG | 0.543180 | 3_1:+73778841 | Msa0374340:CDS |
| GGTCAGCCCCAGCGATATGA+TGG | 0.544470 | 3_1:+73779915 | Msa0374340:CDS |
| TACAGGCTTGGTTGGAGACA+CGG | 0.544880 | 3_1:+73778264 | Msa0374340:CDS |
| GCAGGTGCAGCCGGTGTAGG+CGG | 0.548510 | 3_1:-73777690 | None:intergenic |
| TACTCGATGATTAAGGCTGG+TGG | 0.549281 | 3_1:+73781801 | Msa0374340:CDS |
| TTAGACCCATATTCTTCAGA+TGG | 0.549974 | 3_1:+73779186 | Msa0374340:CDS |
| AAGGAGGTGAAACTGAATGA+TGG | 0.552578 | 3_1:-73777353 | None:intergenic |
| ATTGTATGCCTCATCTCCTG+TGG | 0.553141 | 3_1:-73778992 | None:intergenic |
| GATGAGGCATACAATGAGAA+TGG | 0.554516 | 3_1:+73779000 | Msa0374340:CDS |
| ATGCCCGGATGCTACAGGCT+TGG | 0.560235 | 3_1:+73778252 | Msa0374340:CDS |
| TGCATGTGCAGGTGAAGCCT+GGG | 0.561269 | 3_1:+73780972 | Msa0374340:intron |
| ATATCCAAATAAGGAAGCCC+AGG | 0.561431 | 3_1:-73780989 | None:intergenic |
| GAGAGGCTTTGACTGAAATG+AGG | 0.562495 | 3_1:+73780832 | Msa0374340:CDS |
| AATTCAGGTTGCAAAAGCAC+GGG | 0.565064 | 3_1:+73778834 | Msa0374340:intron |
| TAGACCCATATTCTTCAGAT+GGG | 0.565926 | 3_1:+73779187 | Msa0374340:CDS |
| ACTCGATGATTAAGGCTGGT+GGG | 0.569222 | 3_1:+73781802 | Msa0374340:CDS |
| CCGGATGCTACAGGCTTGGT+TGG | 0.571140 | 3_1:+73778256 | Msa0374340:CDS |
| CAACCAAGCCTGTAGCATCC+GGG | 0.572018 | 3_1:-73778255 | None:intergenic |
| TGGTATGCTGCAATTGGCAG+CGG | 0.572258 | 3_1:-73781037 | None:intergenic |
| TTGTAAACAAGCTGTAGCCC+AGG | 0.575741 | 3_1:+73779698 | Msa0374340:CDS |
| TGTTGTCGCTGGTAATGTGC+CGG | 0.576305 | 3_1:+73777653 | Msa0374340:CDS |
| TGCACCTGCTGGAACGCCAG+TGG | 0.583715 | 3_1:+73777704 | Msa0374340:CDS |
| TTACTGTGCCTTAGACGTGC+CGG | 0.589296 | 3_1:+73781867 | Msa0374340:CDS |
| ACTTGCAGAATAGTTGGTGA+AGG | 0.589843 | 3_1:+73777238 | Msa0374340:five_prime_UTR |
| GTATGCCTCATCTCCTGTGG+GGG | 0.598288 | 3_1:-73778989 | None:intergenic |
| TTAGCCTTCTATATGACAGA+AGG | 0.598289 | 3_1:-73782231 | None:intergenic |
| AGAGGCTTTGACTGAAATGA+GGG | 0.601731 | 3_1:+73780833 | Msa0374340:CDS |
| TATTCTTCAGATGGGCATGA+CGG | 0.608908 | 3_1:+73779195 | Msa0374340:CDS |
| GAGACACGGACTGTTGCAAG+AGG | 0.609699 | 3_1:+73778278 | Msa0374340:CDS |
| TGCTGGTTTAAGATCAACGT+TGG | 0.610444 | 3_1:-73777535 | None:intergenic |
| TGTTAGGATGATGTCAGCAC+CGG | 0.612290 | 3_1:-73781886 | None:intergenic |
| GCCGGTGTAGGCGGTACAGG+AGG | 0.615236 | 3_1:-73777681 | None:intergenic |
| TGTGTTCACTTACAAGATCA+GGG | 0.616355 | 3_1:-73779062 | None:intergenic |
| AGCCCCAGCGATATGATGGA+TGG | 0.618898 | 3_1:+73779919 | Msa0374340:CDS |
| ATGAGGGAAGATGAATCAGA+AGG | 0.619265 | 3_1:+73780849 | Msa0374340:CDS |
| GAGTACTCGATGATTAAGGC+TGG | 0.624101 | 3_1:+73781798 | Msa0374340:CDS |
| TTAAGGTGAACAAGTACGCA+CGG | 0.624642 | 3_1:-73777310 | None:intergenic |
| CTTGCAGAATAGTTGGTGAA+GGG | 0.630920 | 3_1:+73777239 | Msa0374340:five_prime_UTR |
| TCCGGGCATAGCACCAATTG+GGG | 0.638719 | 3_1:-73778238 | None:intergenic |
| CTCACAAGTGAAGTCACCAC+TGG | 0.642836 | 3_1:-73777720 | None:intergenic |
| TGTATGCCTCATCTCCTGTG+GGG | 0.643917 | 3_1:-73778990 | None:intergenic |
| CAAAAGCTATCAGATGAACC+CGG | 0.644138 | 3_1:+73780800 | Msa0374340:intron |
| CACATTACCAGCGACAACAG+CGG | 0.644957 | 3_1:-73777649 | None:intergenic |
| GCCTCCTGTACCGCCTACAC+CGG | 0.648035 | 3_1:+73777680 | Msa0374340:CDS |
| CTAGATAACAACCAATAAGG+AGG | 0.653612 | 3_1:-73777369 | None:intergenic |
| GCTCAATGCATTTGACAGTG+TGG | 0.658784 | 3_1:+73782003 | Msa0374340:three_prime_UTR |
| TAAGGTGAACAAGTACGCAC+GGG | 0.662308 | 3_1:-73777309 | None:intergenic |
| GATATGATGGATGGTCGTGT+TGG | 0.663532 | 3_1:+73779928 | Msa0374340:CDS |
| TGGTGTAATTTAATCAACTG+CGG | 0.675934 | 3_1:+73782100 | Msa0374340:three_prime_UTR |
| TAAAGTTGTTTCCTGAAACG+CGG | 0.676695 | 3_1:-73777894 | None:intergenic |
| TCACCAACTATTCTGCAAGT+CGG | 0.690011 | 3_1:-73777235 | None:intergenic |
| CGTAATCGGAGATTGAAGCG+TGG | 0.716132 | 3_1:-73777457 | None:intergenic |
| GACCATCCATCATATCGCTG+GGG | 0.723541 | 3_1:-73779921 | None:intergenic |
| GAACCCGGCAAACTACAGAG+AGG | 0.774109 | 3_1:+73780815 | Msa0374340:CDS |
| GCTGATCTTCTATTACGACG+AGG | 0.800899 | 3_1:-73777860 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAAGTTATTATTATTA+AGG | - | chr3_1:73777330-73777349 | None:intergenic | 10.0% |
| !! | TTTAGAAGATAAAAAAGAAA+AGG | - | chr3_1:73778738-73778757 | None:intergenic | 15.0% |
| !! | TAAACTAAAATTCAATACTA+AGG | - | chr3_1:73778795-73778814 | None:intergenic | 15.0% |
| !!! | TAATCTAAACATTTTACATT+TGG | + | chr3_1:73779354-73779373 | Msa0374340:intron | 15.0% |
| !!! | TTGTGTTTTTATTTTATGAA+AGG | + | chr3_1:73779873-73779892 | Msa0374340:intron | 15.0% |
| !! | AAATAAGTTTAGTAAAAAGA+AGG | + | chr3_1:73780119-73780138 | Msa0374340:intron | 15.0% |
| !!! | AATTTCTATTTTTGTAGAAT+TGG | - | chr3_1:73780508-73780527 | None:intergenic | 15.0% |
| !!! | TAAAAAAACGATTTTAACTC+TGG | + | chr3_1:73777161-73777180 | Msa0374340:five_prime_UTR | 20.0% |
| !! | GAAATTGAATAAAATTTGTC+TGG | + | chr3_1:73777270-73777289 | Msa0374340:five_prime_UTR | 20.0% |
| !!! | ATGTTTTTTTTTTACAGCAA+TGG | - | chr3_1:73778494-73778513 | None:intergenic | 20.0% |
| !!! | AGATTATGCAGATATTTTTT+TGG | + | chr3_1:73778524-73778543 | Msa0374340:intron | 20.0% |
| !!! | AAAAGGTTTTATGTTTGTTT+GGG | - | chr3_1:73778721-73778740 | None:intergenic | 20.0% |
| !! | TATATTCTACCAAAAATTGA+TGG | - | chr3_1:73778936-73778955 | None:intergenic | 20.0% |
| !!! | TTGAGAATGTTATATTTTTC+TGG | + | chr3_1:73779095-73779114 | Msa0374340:intron | 20.0% |
| !!! | TTTTCCAGGAATAATATTAA+AGG | - | chr3_1:73779461-73779480 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAATTTCTTTTCC+AGG | - | chr3_1:73779475-73779494 | None:intergenic | 20.0% |
| !! | GAAATTAAAAAAGAAATCGT+CGG | + | chr3_1:73779481-73779500 | Msa0374340:intron | 20.0% |
| !! | AAATTAAAAAAGAAATCGTC+GGG | + | chr3_1:73779482-73779501 | Msa0374340:intron | 20.0% |
| !!! | TTATATTTTTATATCGAGCT+GGG | + | chr3_1:73781108-73781127 | Msa0374340:intron | 20.0% |
| !! | TAAAATGATTGATGAAGAAA+AGG | + | chr3_1:73781830-73781849 | Msa0374340:CDS | 20.0% |
| !!! | CATAAAATTATTTTACCGCT+TGG | - | chr3_1:73777208-73777227 | None:intergenic | 25.0% |
| ! | AAACTAGATAACAACCAATA+AGG | - | chr3_1:73777375-73777394 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTGTGTGTGTTT+TGG | + | chr3_1:73777811-73777830 | Msa0374340:intron | 25.0% |
| !!! | TATCCACTTTTTATACATGA+AGG | + | chr3_1:73777935-73777954 | Msa0374340:CDS | 25.0% |
| ! | TAACCTTCATGTATAAAAAG+TGG | - | chr3_1:73777941-73777960 | None:intergenic | 25.0% |
| ! | AAATTTAGCTGAGAAAATGT+TGG | + | chr3_1:73778386-73778405 | Msa0374340:intron | 25.0% |
| !!! | AATTCAATACCACTTTTGAA+TGG | - | chr3_1:73778457-73778476 | None:intergenic | 25.0% |
| !! | ATTCAAAAGTGGTATTGAAT+TGG | + | chr3_1:73778456-73778475 | Msa0374340:intron | 25.0% |
| !! | TTCAAAAGTGGTATTGAATT+GGG | + | chr3_1:73778457-73778476 | Msa0374340:intron | 25.0% |
| !! | AATTTTATTCTTTACCGATC+TGG | + | chr3_1:73778550-73778569 | Msa0374340:intron | 25.0% |
| !! | AGAGTTTGGATAGATTTTAT+TGG | + | chr3_1:73778577-73778596 | Msa0374340:intron | 25.0% |
| !! | GAGTTTGGATAGATTTTATT+GGG | + | chr3_1:73778578-73778597 | Msa0374340:intron | 25.0% |
| !!! | GAAAAGGTTTTATGTTTGTT+TGG | - | chr3_1:73778722-73778741 | None:intergenic | 25.0% |
| !!! | AAAAAGATTTTGACGACAAA+AGG | - | chr3_1:73779255-73779274 | None:intergenic | 25.0% |
| ! | ATCATGTTCTGTAACAAAAT+AGG | - | chr3_1:73779284-73779303 | None:intergenic | 25.0% |
| !! | AACATTTTACATTTGGATGA+TGG | + | chr3_1:73779361-73779380 | Msa0374340:intron | 25.0% |
| ! | TGTACCTTTAATATTATTCC+TGG | + | chr3_1:73779454-73779473 | Msa0374340:intron | 25.0% |
| ! | ATGATTTGAACTATTCTTGA+AGG | + | chr3_1:73779568-73779587 | Msa0374340:intron | 25.0% |
| !! | TTATTGACTACAATCAAGAA+AGG | - | chr3_1:73779607-73779626 | None:intergenic | 25.0% |
| ! | GTATATCCTTAATATCTTGT+AGG | + | chr3_1:73779642-73779661 | Msa0374340:intron | 25.0% |
| ! | ATAACTCCTACAAGATATTA+AGG | - | chr3_1:73779651-73779670 | None:intergenic | 25.0% |
| ! | AAGATGTAGTTATATTACCT+GGG | - | chr3_1:73779718-73779737 | None:intergenic | 25.0% |
| ! | AAAGATGTAGTTATATTACC+TGG | - | chr3_1:73779719-73779738 | None:intergenic | 25.0% |
| !!! | AAGTTACCATTATTTTGTTC+AGG | + | chr3_1:73779761-73779780 | Msa0374340:intron | 25.0% |
| !!! | AGTTACCATTATTTTGTTCA+GGG | + | chr3_1:73779762-73779781 | Msa0374340:intron | 25.0% |
| ! | ACTAAATTATGTTAGTGTCT+TGG | - | chr3_1:73779853-73779872 | None:intergenic | 25.0% |
| !!! | TAAACTTATTTCTAAAGCTC+AGG | - | chr3_1:73780110-73780129 | None:intergenic | 25.0% |
| !!! | GGCATTTTTTTTTATTGATC+TGG | + | chr3_1:73780181-73780200 | Msa0374340:intron | 25.0% |
| ! | AGAAATTATGACTAACAAGA+TGG | + | chr3_1:73780521-73780540 | Msa0374340:intron | 25.0% |
| !! | TATCATGCATATTTTCTTGT+CGG | + | chr3_1:73780565-73780584 | Msa0374340:intron | 25.0% |
| !! | TTCTAAATTATGCCGTTTAT+TGG | + | chr3_1:73780601-73780620 | Msa0374340:intron | 25.0% |
| ! | TTATGTATACGATCATAGTT+AGG | + | chr3_1:73780903-73780922 | Msa0374340:intron | 25.0% |
| !! | TTCCTTATTTGGATATCATA+AGG | + | chr3_1:73780996-73781015 | Msa0374340:CDS | 25.0% |
| !!! | CTTATATTTTTATATCGAGC+TGG | + | chr3_1:73781107-73781126 | Msa0374340:intron | 25.0% |
| !!! | TATATTTTTATATCGAGCTG+GGG | + | chr3_1:73781109-73781128 | Msa0374340:intron | 25.0% |
| !!! | TAACCATTTTTGGAAAGAAT+CGG | - | chr3_1:73781208-73781227 | None:intergenic | 25.0% |
| ! | TCTTTCCAAAAATGGTTAAT+CGG | + | chr3_1:73781210-73781229 | Msa0374340:intron | 25.0% |
| !! | CGCTTTATTGTAATAAACTT+TGG | + | chr3_1:73781446-73781465 | Msa0374340:intron | 25.0% |
| ! | AGATAAGATACAAAAACAGT+TGG | + | chr3_1:73781573-73781592 | Msa0374340:intron | 25.0% |
| ! | GTTGTTCATCATAGATATTA+TGG | + | chr3_1:73781629-73781648 | Msa0374340:intron | 25.0% |
| ! | ATTGACTGCTTTAATCTTAA+GGG | - | chr3_1:73781678-73781697 | None:intergenic | 25.0% |
| ! | AATTGACTGCTTTAATCTTA+AGG | - | chr3_1:73781679-73781698 | None:intergenic | 25.0% |
| ! | CATCATTAACATAAAACCAA+AGG | - | chr3_1:73781710-73781729 | None:intergenic | 25.0% |
| !! | TGACAAAAACAACACATTTT+GGG | - | chr3_1:73782063-73782082 | None:intergenic | 25.0% |
| !! | TTGACAAAAACAACACATTT+TGG | - | chr3_1:73782064-73782083 | None:intergenic | 25.0% |
| ! | TACACCATTTGTAAGATAAT+GGG | - | chr3_1:73782087-73782106 | None:intergenic | 25.0% |
| ! | TTACACCATTTGTAAGATAA+TGG | - | chr3_1:73782088-73782107 | None:intergenic | 25.0% |
| !! | TTAATAAAGTCAACCTTTTG+CGG | + | chr3_1:73782187-73782206 | Msa0374340:three_prime_UTR | 25.0% |
| !! | AAAATTATTTTACCGCTTGG+TGG | - | chr3_1:73777205-73777224 | None:intergenic | 30.0% |
| ! | GTGTGTGAATTTAAGGTTAA+GGG | - | chr3_1:73777516-73777535 | None:intergenic | 30.0% |
| AAGCTCAAATAGTTCTTCAA+TGG | - | chr3_1:73777564-73777583 | None:intergenic | 30.0% | |
| AGTGGATAAACAAAATTAGC+AGG | - | chr3_1:73777923-73777942 | None:intergenic | 30.0% | |
| !! | ATACATGAAGGTTAGTCTTA+AGG | + | chr3_1:73777947-73777966 | Msa0374340:intron | 30.0% |
| AAACTCTTGTGAAACTGTTT+CGG | + | chr3_1:73778009-73778028 | Msa0374340:intron | 30.0% | |
| !! | TACATACATTGTTAGCTTGT+AGG | + | chr3_1:73778144-73778163 | Msa0374340:intron | 30.0% |
| ! | AATATTTGAACCCTTTTTGC+AGG | + | chr3_1:73778204-73778223 | Msa0374340:intron | 30.0% |
| ! | TGTTGCAAGAGGTTTTTATA+TGG | + | chr3_1:73778289-73778308 | Msa0374340:intron | 30.0% |
| ATGACATTACCATTCAAAAG+TGG | + | chr3_1:73778445-73778464 | Msa0374340:intron | 30.0% | |
| ! | TCAAAAGTGGTATTGAATTG+GGG | + | chr3_1:73778458-73778477 | Msa0374340:intron | 30.0% |
| TGTAATGAGAAGTTCAACAT+TGG | - | chr3_1:73778614-73778633 | None:intergenic | 30.0% | |
| ! | CAGTGAGCATTTTATAATTC+AGG | + | chr3_1:73778819-73778838 | Msa0374340:intron | 30.0% |
| !! | TTCAAAGCATCTGGAATTTT+GGG | - | chr3_1:73778889-73778908 | None:intergenic | 30.0% |
| TTAAGTAATCGTATAGTTCG+AGG | - | chr3_1:73779033-73779052 | None:intergenic | 30.0% | |
| TCGAACTATACGATTACTTA+AGG | + | chr3_1:73779032-73779051 | Msa0374340:CDS | 30.0% | |
| CAGAACATGATTCATTTCAT+TGG | + | chr3_1:73779293-73779312 | Msa0374340:intron | 30.0% | |
| AGAATCCCTGAACAAAATAA+TGG | - | chr3_1:73779770-73779789 | None:intergenic | 30.0% | |
| AAGTATAGCAAGAAAAACCT+TGG | - | chr3_1:73779819-73779838 | None:intergenic | 30.0% | |
| GCAAAAACAGAAAGTAAGAT+CGG | - | chr3_1:73780049-73780068 | None:intergenic | 30.0% | |
| AAATCGACAATTGCTAATGA+TGG | + | chr3_1:73780159-73780178 | Msa0374340:intron | 30.0% | |
| AATCGACAATTGCTAATGAT+GGG | + | chr3_1:73780160-73780179 | Msa0374340:intron | 30.0% | |
| CTTACAAGTTTGTGTTAAGA+AGG | + | chr3_1:73780210-73780229 | Msa0374340:intron | 30.0% | |
| TATCGATGGCTATCTATTAT+AGG | + | chr3_1:73780245-73780264 | Msa0374340:intron | 30.0% | |
| TCTATTATAGGTTGTAGCAT+TGG | + | chr3_1:73780257-73780276 | Msa0374340:intron | 30.0% | |
| CTATTATAGGTTGTAGCATT+GGG | + | chr3_1:73780258-73780277 | Msa0374340:intron | 30.0% | |
| GTGAAGATATTCAAAATGTG+TGG | + | chr3_1:73780286-73780305 | Msa0374340:intron | 30.0% | |
| TTATGACTAACAAGATGGAT+TGG | + | chr3_1:73780526-73780545 | Msa0374340:intron | 30.0% | |
| ! | TTCATTTTATGGCCCATTTA+GGG | + | chr3_1:73780643-73780662 | Msa0374340:CDS | 30.0% |
| ! | ACGTCTTTTTATCTCCAAAA+CGG | - | chr3_1:73780688-73780707 | None:intergenic | 30.0% |
| TATTTACGTTGCCATATACT+TGG | + | chr3_1:73780767-73780786 | Msa0374340:intron | 30.0% | |
| TATACGATCATAGTTAGGAA+TGG | + | chr3_1:73780908-73780927 | Msa0374340:intron | 30.0% | |
| TTTAGAAAATTTGCATGTGC+AGG | + | chr3_1:73780961-73780980 | Msa0374340:intron | 30.0% | |
| ! | AGCCTTATGATATCCAAATA+AGG | - | chr3_1:73781001-73781020 | None:intergenic | 30.0% |
| TTTATGCCAAGAACTAGAAT+GGG | - | chr3_1:73781076-73781095 | None:intergenic | 30.0% | |
| AATCCGATTCTTTCCAAAAA+TGG | + | chr3_1:73781202-73781221 | Msa0374340:intron | 30.0% | |
| CTTTCCAAAAATGGTTAATC+GGG | + | chr3_1:73781211-73781230 | Msa0374340:intron | 30.0% | |
| ! | AATTCCCGATTAACCATTTT+TGG | - | chr3_1:73781218-73781237 | None:intergenic | 30.0% |
| AGTCAATTAGAGAAAACCTT+TGG | + | chr3_1:73781691-73781710 | Msa0374340:intron | 30.0% | |
| AGAAACCTGTTGTGAATAAA+GGG | - | chr3_1:73781775-73781794 | None:intergenic | 30.0% | |
| CTTGTAGAGCAAAATATGTT+AGG | - | chr3_1:73781905-73781924 | None:intergenic | 30.0% | |
| ! | GATTTTTGTGTGGAGAAAAA+AGG | + | chr3_1:73781931-73781950 | Msa0374340:CDS | 30.0% |
| GTGAGATTCTTCAAACATTT+AGG | + | chr3_1:73781953-73781972 | Msa0374340:exon | 30.0% | |
| ! | GACAAAAACAACACATTTTG+GGG | - | chr3_1:73782062-73782081 | None:intergenic | 30.0% |
| TCAACCCATTATCTTACAAA+TGG | + | chr3_1:73782080-73782099 | Msa0374340:three_prime_UTR | 30.0% | |
| TGGTGTAATTTAATCAACTG+CGG | + | chr3_1:73782100-73782119 | Msa0374340:three_prime_UTR | 30.0% | |
| TCATAAACATTTACCGCAAA+AGG | - | chr3_1:73782203-73782222 | None:intergenic | 30.0% | |
| AACGAACAAGAGAAGAGAAA+AGG | + | chr3_1:73777112-73777131 | Msa0374340:five_prime_UTR | 35.0% | |
| ATTCAGTTTCACCTCCTTAT+TGG | + | chr3_1:73777358-73777377 | Msa0374340:five_prime_UTR | 35.0% | |
| CTAGATAACAACCAATAAGG+AGG | - | chr3_1:73777372-73777391 | None:intergenic | 35.0% | |
| TCAATCTCCGATTACGATTA+TGG | + | chr3_1:73777464-73777483 | Msa0374340:exon | 35.0% | |
| GAAGAAGCCATAATCGTAAT+CGG | - | chr3_1:73777474-73777493 | None:intergenic | 35.0% | |
| ! | TTTAAGGTTAAGGGTGTGTT+TGG | - | chr3_1:73777507-73777526 | None:intergenic | 35.0% |
| ! | GGTGTGTGAATTTAAGGTTA+AGG | - | chr3_1:73777517-73777536 | None:intergenic | 35.0% |
| AACGTTGGTGTGTGAATTTA+AGG | - | chr3_1:73777523-73777542 | None:intergenic | 35.0% | |
| !! | TTTTGTTTCAGCCAATTCAG+AGG | + | chr3_1:73777834-73777853 | Msa0374340:intron | 35.0% |
| ! | TAAAGTTGTTTCCTGAAACG+CGG | - | chr3_1:73777897-73777916 | None:intergenic | 35.0% |
| !! | GTTAGTCTTAAGGACATGTT+TGG | + | chr3_1:73777957-73777976 | Msa0374340:intron | 35.0% |
| ! | CTTTTTCTGTAGAGCTTTTG+TGG | + | chr3_1:73778109-73778128 | Msa0374340:intron | 35.0% |
| ! | TTGGACTTTGAAAATGTAGC+AGG | + | chr3_1:73778405-73778424 | Msa0374340:intron | 35.0% |
| !! | ACATTGCTTGATTGTTTCTG+AGG | + | chr3_1:73778631-73778650 | Msa0374340:intron | 35.0% |
| !! | TAATTCAGGTTGCAAAAGCA+CGG | + | chr3_1:73778833-73778852 | Msa0374340:intron | 35.0% |
| !! | TCAAAGCATCTGGAATTTTG+GGG | - | chr3_1:73778888-73778907 | None:intergenic | 35.0% |
| !! | CTTCAAAGCATCTGGAATTT+TGG | - | chr3_1:73778890-73778909 | None:intergenic | 35.0% |
| CAAAATTCCAGATGCTTTGA+AGG | + | chr3_1:73778888-73778907 | Msa0374340:CDS | 35.0% | |
| ! | AATAGAACCTTCAAAGCATC+TGG | - | chr3_1:73778898-73778917 | None:intergenic | 35.0% |
| ! | TCACACTTGCCATCAATTTT+TGG | + | chr3_1:73778924-73778943 | Msa0374340:intron | 35.0% |
| TGTGTTCACTTACAAGATCA+GGG | - | chr3_1:73779065-73779084 | None:intergenic | 35.0% | |
| CAACAGTTGAACAAGGATAT+TGG | - | chr3_1:73779140-73779159 | None:intergenic | 35.0% | |
| TTAGACCCATATTCTTCAGA+TGG | + | chr3_1:73779186-73779205 | Msa0374340:CDS | 35.0% | |
| TAGACCCATATTCTTCAGAT+GGG | + | chr3_1:73779187-73779206 | Msa0374340:CDS | 35.0% | |
| AATCGTCGGGAATTAAATTG+TGG | + | chr3_1:73779495-73779514 | Msa0374340:intron | 35.0% | |
| TTACCAACACAAGTTCATAC+AGG | - | chr3_1:73779533-73779552 | None:intergenic | 35.0% | |
| GTTCAAATCATGCAAATCCT+AGG | - | chr3_1:73779559-73779578 | None:intergenic | 35.0% | |
| TGAACTATTCTTGAAGGAAG+TGG | + | chr3_1:73779574-73779593 | Msa0374340:intron | 35.0% | |
| TCATGTGTACATCTTCAACT+AGG | + | chr3_1:73779738-73779757 | Msa0374340:intron | 35.0% | |
| GAAAAACCTTGGAACATAGA+AGG | - | chr3_1:73779808-73779827 | None:intergenic | 35.0% | |
| ATTATGTTAGTGTCTTGGTG+CGG | - | chr3_1:73779848-73779867 | None:intergenic | 35.0% | |
| AGCAAAGTAATTTGATCGCT+TGG | + | chr3_1:73780011-73780030 | Msa0374340:intron | 35.0% | |
| AGTAAGATCGGAAAAGGAAA+TGG | - | chr3_1:73780037-73780056 | None:intergenic | 35.0% | |
| ACAGAAAGTAAGATCGGAAA+AGG | - | chr3_1:73780043-73780062 | None:intergenic | 35.0% | |
| CAATAATTTCCAATGCATGC+AGG | - | chr3_1:73780071-73780090 | None:intergenic | 35.0% | |
| AATTTGAACGCTACGGTTAT+TGG | - | chr3_1:73780403-73780422 | None:intergenic | 35.0% | |
| CTAAAGGAATTTGAACGCTA+CGG | - | chr3_1:73780410-73780429 | None:intergenic | 35.0% | |
| CAAATATAGTGAGATGCTCA+TGG | - | chr3_1:73780448-73780467 | None:intergenic | 35.0% | |
| ! | GTTCATTTTATGGCCCATTT+AGG | + | chr3_1:73780642-73780661 | Msa0374340:CDS | 35.0% |
| ! | TCTTTTTATCTCCAAAACGG+GGG | - | chr3_1:73780685-73780704 | None:intergenic | 35.0% |
| ! | GTCTTTTTATCTCCAAAACG+GGG | - | chr3_1:73780686-73780705 | None:intergenic | 35.0% |
| ! | CGTCTTTTTATCTCCAAAAC+GGG | - | chr3_1:73780687-73780706 | None:intergenic | 35.0% |
| AGAAGGAGCTGATATTCTAT+TGG | + | chr3_1:73780866-73780885 | Msa0374340:CDS | 35.0% | |
| GTTTATGCCAAGAACTAGAA+TGG | - | chr3_1:73781077-73781096 | None:intergenic | 35.0% | |
| TCATGTGAATCTTCCAGTTT+GGG | + | chr3_1:73781268-73781287 | Msa0374340:intron | 35.0% | |
| CTGCTTTAATCTTAAGGGTA+GGG | - | chr3_1:73781673-73781692 | None:intergenic | 35.0% | |
| ACTGCTTTAATCTTAAGGGT+AGG | - | chr3_1:73781674-73781693 | None:intergenic | 35.0% | |
| AAACCTGTTGTGAATAAAGG+GGG | - | chr3_1:73781773-73781792 | None:intergenic | 35.0% | |
| GAAACCTGTTGTGAATAAAG+GGG | - | chr3_1:73781774-73781793 | None:intergenic | 35.0% | |
| CAGAAACCTGTTGTGAATAA+AGG | - | chr3_1:73781776-73781795 | None:intergenic | 35.0% | |
| CTTTATTCACAACAGGTTTC+TGG | + | chr3_1:73781774-73781793 | Msa0374340:intron | 35.0% | |
| TGATGAAGAAAAGGTGATGA+TGG | + | chr3_1:73781839-73781858 | Msa0374340:CDS | 35.0% | |
| ! | TTCTAGTTATTCTGCTGTTG+AGG | - | chr3_1:73782149-73782168 | None:intergenic | 35.0% |
| TCTATATGACAGAAGGCTAA+TGG | - | chr3_1:73782227-73782246 | None:intergenic | 35.0% | |
| ! | TTAGCCTTCTGTCATATAGA+AGG | + | chr3_1:73782227-73782246 | Msa0374340:three_prime_UTR | 35.0% |
| TCTCTTGTTCGTTTCACGTT+CGG | - | chr3_1:73777105-73777124 | None:intergenic | 40.0% | |
| !!! | ACGATTTTAACTCTGGTGAG+TGG | + | chr3_1:73777168-73777187 | Msa0374340:five_prime_UTR | 40.0% |
| TCACCAACTATTCTGCAAGT+CGG | - | chr3_1:73777238-73777257 | None:intergenic | 40.0% | |
| !! | ACTTGCAGAATAGTTGGTGA+AGG | + | chr3_1:73777238-73777257 | Msa0374340:five_prime_UTR | 40.0% |
| !! | CTTGCAGAATAGTTGGTGAA+GGG | + | chr3_1:73777239-73777258 | Msa0374340:five_prime_UTR | 40.0% |
| !! | TAGTTGGTGAAGGGTAGAAA+TGG | + | chr3_1:73777248-73777267 | Msa0374340:five_prime_UTR | 40.0% |
| TTAAGGTGAACAAGTACGCA+CGG | - | chr3_1:73777313-73777332 | None:intergenic | 40.0% | |
| AAGGAGGTGAAACTGAATGA+TGG | - | chr3_1:73777356-73777375 | None:intergenic | 40.0% | |
| !! | TGCTGGTTTAAGATCAACGT+TGG | - | chr3_1:73777538-73777557 | None:intergenic | 40.0% |
| ! | TAGTTCTTCAATGGTAGTGC+TGG | - | chr3_1:73777555-73777574 | None:intergenic | 40.0% |
| CTGACAGTAAAAAGACATGG+AGG | - | chr3_1:73777606-73777625 | None:intergenic | 40.0% | |
| GCTCTGACAGTAAAAAGACA+TGG | - | chr3_1:73777609-73777628 | None:intergenic | 40.0% | |
| TCCAAACTCTTAGACCAGAT+CGG | - | chr3_1:73778567-73778586 | None:intergenic | 40.0% | |
| !! | AATTCAGGTTGCAAAAGCAC+GGG | + | chr3_1:73778834-73778853 | Msa0374340:intron | 40.0% |
| GATGAGGCATACAATGAGAA+TGG | + | chr3_1:73779000-73779019 | Msa0374340:CDS | 40.0% | |
| CTGTGTTCACTTACAAGATC+AGG | - | chr3_1:73779066-73779085 | None:intergenic | 40.0% | |
| TCCTTGTTCAACTGTTGTTC+AGG | + | chr3_1:73779143-73779162 | Msa0374340:intron | 40.0% | |
| ACCTGAACAACAGTTGAACA+AGG | - | chr3_1:73779147-73779166 | None:intergenic | 40.0% | |
| CATGCCCATCTGAAGAATAT+GGG | - | chr3_1:73779194-73779213 | None:intergenic | 40.0% | |
| TCATGCCCATCTGAAGAATA+TGG | - | chr3_1:73779195-73779214 | None:intergenic | 40.0% | |
| TATTCTTCAGATGGGCATGA+CGG | + | chr3_1:73779195-73779214 | Msa0374340:CDS | 40.0% | |
| ! | TAATGCTAGAAGTATGCTGC+TGG | - | chr3_1:73779402-73779421 | None:intergenic | 40.0% |
| CAACACAAGTTCATACAGGA+AGG | - | chr3_1:73779529-73779548 | None:intergenic | 40.0% | |
| CTTCCTGTATGAACTTGTGT+TGG | + | chr3_1:73779527-73779546 | Msa0374340:intron | 40.0% | |
| ! | ACTTGTGTTGGTAAAAGCCT+AGG | + | chr3_1:73779539-73779558 | Msa0374340:intron | 40.0% |
| TACTCACCTTCTATGTTCCA+AGG | + | chr3_1:73779799-73779818 | Msa0374340:intron | 40.0% | |
| GGATCTAGACTTACTATCGA+TGG | + | chr3_1:73780231-73780250 | Msa0374340:intron | 40.0% | |
| ! | TAGGTTGTAGCATTGGGTAT+CGG | + | chr3_1:73780264-73780283 | Msa0374340:intron | 40.0% |
| CATTTCCATTATGCACAAGC+TGG | + | chr3_1:73780334-73780353 | Msa0374340:intron | 40.0% | |
| AGAAACCAGCTTGTGCATAA+TGG | - | chr3_1:73780342-73780361 | None:intergenic | 40.0% | |
| !! | ATTGTCCCTGATTTGCTCAT+TGG | + | chr3_1:73780478-73780497 | Msa0374340:intron | 40.0% |
| GTTCTCCAATGAGCAAATCA+GGG | - | chr3_1:73780486-73780505 | None:intergenic | 40.0% | |
| ACCTGTTGGCAACCAATAAA+CGG | - | chr3_1:73780616-73780635 | None:intergenic | 40.0% | |
| ! | AGGTACGCGAGTTCATTTTA+TGG | + | chr3_1:73780632-73780651 | Msa0374340:intron | 40.0% |
| AGTCCAATGCTTCCCTAAAT+GGG | - | chr3_1:73780658-73780677 | None:intergenic | 40.0% | |
| TGGCACTCAGTTCAATTTCA+AGG | - | chr3_1:73780719-73780738 | None:intergenic | 40.0% | |
| CAAAAGCTATCAGATGAACC+CGG | + | chr3_1:73780800-73780819 | Msa0374340:intron | 40.0% | |
| ! | AGAGGCTTTGACTGAAATGA+GGG | + | chr3_1:73780833-73780852 | Msa0374340:CDS | 40.0% |
| ATGAGGGAAGATGAATCAGA+AGG | + | chr3_1:73780849-73780868 | Msa0374340:CDS | 40.0% | |
| GGAGCTGATATTCTATTGGT+TGG | + | chr3_1:73780870-73780889 | Msa0374340:intron | 40.0% | |
| ATATCCAAATAAGGAAGCCC+AGG | - | chr3_1:73780992-73781011 | None:intergenic | 40.0% | |
| CTCATGTGAATCTTCCAGTT+TGG | + | chr3_1:73781267-73781286 | Msa0374340:intron | 40.0% | |
| AGCAGTTCATATTCCCAAAC+TGG | - | chr3_1:73781284-73781303 | None:intergenic | 40.0% | |
| CTGGAACATCATTTAGACAG+TGG | + | chr3_1:73781534-73781553 | Msa0374340:intron | 40.0% | |
| TGGTGAGTACTCGATGATTA+AGG | + | chr3_1:73781794-73781813 | Msa0374340:CDS | 40.0% | |
| ! | AGGACAATTTTCTTCCCAGA+AGG | + | chr3_1:73781973-73781992 | Msa0374340:three_prime_UTR | 40.0% |
| GAAGAGAAAAGGAACGTTGC+TGG | + | chr3_1:73777123-73777142 | Msa0374340:five_prime_UTR | 45.0% | |
| ! | GACTTTTACGTTCCACCAAG+CGG | + | chr3_1:73777190-73777209 | Msa0374340:five_prime_UTR | 45.0% |
| !! | TGACCGACTTGCAGAATAGT+TGG | + | chr3_1:73777232-73777251 | Msa0374340:five_prime_UTR | 45.0% |
| TAAGGTGAACAAGTACGCAC+GGG | - | chr3_1:73777312-73777331 | None:intergenic | 45.0% | |
| GCTGATCTTCTATTACGACG+AGG | - | chr3_1:73777863-73777882 | None:intergenic | 45.0% | |
| CAGAAAAAGCCGAGAGCAAA+CGG | - | chr3_1:73778098-73778117 | None:intergenic | 45.0% | |
| ! | TTGAACCCTTTTTGCAGGTG+AGG | + | chr3_1:73778209-73778228 | Msa0374340:intron | 45.0% |
| ACCGATCTGGTCTAAGAGTT+TGG | + | chr3_1:73778563-73778582 | Msa0374340:intron | 45.0% | |
| TTGTATGCCTCATCTCCTGT+GGG | - | chr3_1:73778994-73779013 | None:intergenic | 45.0% | |
| ATTGTATGCCTCATCTCCTG+TGG | - | chr3_1:73778995-73779014 | None:intergenic | 45.0% | |
| GACGGCATTGTTAGAGAAGA+TGG | + | chr3_1:73779213-73779232 | Msa0374340:CDS | 45.0% | |
| TTCTTGAAGGAAGTGGCAAG+TGG | + | chr3_1:73779581-73779600 | Msa0374340:intron | 45.0% | |
| TTGTAAACAAGCTGTAGCCC+AGG | + | chr3_1:73779698-73779717 | Msa0374340:CDS | 45.0% | |
| ! | ATTTTATGAAAGGCCCGTGC+TGG | + | chr3_1:73779883-73779902 | Msa0374340:intron | 45.0% |
| !! | GATATGATGGATGGTCGTGT+TGG | + | chr3_1:73779928-73779947 | Msa0374340:CDS | 45.0% |
| !!! | CTGTTTTTGCCTGCATGCAT+TGG | + | chr3_1:73780059-73780078 | Msa0374340:intron | 45.0% |
| GCAGCTACAAGATGCACTAA+AGG | - | chr3_1:73780426-73780445 | None:intergenic | 45.0% | |
| GGTTCTCCAATGAGCAAATC+AGG | - | chr3_1:73780487-73780506 | None:intergenic | 45.0% | |
| AAATGAACTCGCGTACCTGT+TGG | - | chr3_1:73780630-73780649 | None:intergenic | 45.0% | |
| GAGTCCAATGCTTCCCTAAA+TGG | - | chr3_1:73780659-73780678 | None:intergenic | 45.0% | |
| ACGTTGCCATATACTTGGTC+TGG | + | chr3_1:73780772-73780791 | Msa0374340:intron | 45.0% | |
| GTTCAGCCAGACCAAGTATA+TGG | - | chr3_1:73780781-73780800 | None:intergenic | 45.0% | |
| ! | AAAGCCTCTCTGTAGTTTGC+CGG | - | chr3_1:73780822-73780841 | None:intergenic | 45.0% |
| ! | GAGAGGCTTTGACTGAAATG+AGG | + | chr3_1:73780832-73780851 | Msa0374340:CDS | 45.0% |
| AGAACCTGGTATGCTGCAAT+TGG | - | chr3_1:73781046-73781065 | None:intergenic | 45.0% | |
| TTACAGACGGGTAAGGGAAA+AGG | - | chr3_1:73781511-73781530 | None:intergenic | 45.0% | |
| ! | TTTTCCCTTACCCGTCTGTA+AGG | + | chr3_1:73781510-73781529 | Msa0374340:intron | 45.0% |
| ATGTTCCAGACCTTACAGAC+GGG | - | chr3_1:73781523-73781542 | None:intergenic | 45.0% | |
| GATGTTCCAGACCTTACAGA+CGG | - | chr3_1:73781524-73781543 | None:intergenic | 45.0% | |
| TGACCCCCTTTATTCACAAC+AGG | + | chr3_1:73781767-73781786 | Msa0374340:intron | 45.0% | |
| GAGTACTCGATGATTAAGGC+TGG | + | chr3_1:73781798-73781817 | Msa0374340:CDS | 45.0% | |
| TACTCGATGATTAAGGCTGG+TGG | + | chr3_1:73781801-73781820 | Msa0374340:CDS | 45.0% | |
| ACTCGATGATTAAGGCTGGT+GGG | + | chr3_1:73781802-73781821 | Msa0374340:CDS | 45.0% | |
| TGTTAGGATGATGTCAGCAC+CGG | - | chr3_1:73781889-73781908 | None:intergenic | 45.0% | |
| ! | CAAGCTGCGAGATTTTTGTG+TGG | + | chr3_1:73781921-73781940 | Msa0374340:CDS | 45.0% |
| GTCAAATGCATTGAGCTCTC+TGG | - | chr3_1:73781999-73782018 | None:intergenic | 45.0% | |
| GCTCAATGCATTTGACAGTG+TGG | + | chr3_1:73782003-73782022 | Msa0374340:three_prime_UTR | 45.0% | |
| !!! | TAAAAAAAAAACATTTTTAA+AGG | + | chr3_1:73778500-73778519 | Msa0374340:intron | 5.0% |
| !!! | AAAAAAAAAACATTTTTAAA+GGG | + | chr3_1:73778501-73778520 | Msa0374340:intron | 5.0% |
| !!! | TTTAAAATAGATTAAATATT+TGG | - | chr3_1:73780739-73780758 | None:intergenic | 5.0% |
| CGTAATCGGAGATTGAAGCG+TGG | - | chr3_1:73777460-73777479 | None:intergenic | 50.0% | |
| GGCTTCGAAATCTGCATCAC+TGG | - | chr3_1:73777631-73777650 | None:intergenic | 50.0% | |
| CACATTACCAGCGACAACAG+CGG | - | chr3_1:73777652-73777671 | None:intergenic | 50.0% | |
| ! | TGTTGTCGCTGGTAATGTGC+CGG | + | chr3_1:73777653-73777672 | Msa0374340:CDS | 50.0% |
| CTCACAAGTGAAGTCACCAC+TGG | - | chr3_1:73777723-73777742 | None:intergenic | 50.0% | |
| TACACATCGATCCGCGTTTC+AGG | + | chr3_1:73777883-73777902 | Msa0374340:CDS | 50.0% | |
| AGCTTGCATCCGTTTGCTCT+CGG | + | chr3_1:73778086-73778105 | Msa0374340:intron | 50.0% | |
| ! | AACCCTTTTTGCAGGTGAGG+AGG | + | chr3_1:73778212-73778231 | Msa0374340:intron | 50.0% |
| GTCCTCCTCACCTGCAAAAA+GGG | - | chr3_1:73778217-73778236 | None:intergenic | 50.0% | |
| TGTCCTCCTCACCTGCAAAA+AGG | - | chr3_1:73778218-73778237 | None:intergenic | 50.0% | |
| ATCCGGGCATAGCACCAATT+GGG | - | chr3_1:73778242-73778261 | None:intergenic | 50.0% | |
| ! | TACAGGCTTGGTTGGAGACA+CGG | + | chr3_1:73778264-73778283 | Msa0374340:CDS | 50.0% |
| ! | GTTGCAAAAGCACGGGATGT+TGG | + | chr3_1:73778841-73778860 | Msa0374340:CDS | 50.0% |
| ATCTCCTGTGGGGGTCTAAA+GGG | - | chr3_1:73778983-73779002 | None:intergenic | 50.0% | |
| TGTATGCCTCATCTCCTGTG+GGG | - | chr3_1:73778993-73779012 | None:intergenic | 50.0% | |
| GACCATCCATCATATCGCTG+GGG | - | chr3_1:73779924-73779943 | None:intergenic | 50.0% | |
| CGACCATCCATCATATCGCT+GGG | - | chr3_1:73779925-73779944 | None:intergenic | 50.0% | |
| ACGACCATCCATCATATCGC+TGG | - | chr3_1:73779926-73779945 | None:intergenic | 50.0% | |
| ACGCTACGGTTATTGGCGAA+AGG | - | chr3_1:73780396-73780415 | None:intergenic | 50.0% | |
| ! | GCCGTTTATTGGTTGCCAAC+AGG | + | chr3_1:73780612-73780631 | Msa0374340:intron | 50.0% |
| ! | TGGCCCATTTAGGGAAGCAT+TGG | + | chr3_1:73780652-73780671 | Msa0374340:CDS | 50.0% |
| ! | TTGGACTCAAACCCCCGTTT+TGG | + | chr3_1:73780671-73780690 | Msa0374340:CDS | 50.0% |
| ! | AAGCCTCTCTGTAGTTTGCC+GGG | - | chr3_1:73780821-73780840 | None:intergenic | 50.0% |
| GAAGCCTGGGCTTCCTTATT+TGG | + | chr3_1:73780985-73781004 | Msa0374340:CDS | 50.0% | |
| TGGTATGCTGCAATTGGCAG+CGG | - | chr3_1:73781040-73781059 | None:intergenic | 50.0% | |
| CAGCATACCAGGTTCTTCTC+TGG | + | chr3_1:73781050-73781069 | Msa0374340:intron | 50.0% | |
| !! | CTCTGGCCCATTCTAGTTCT+TGG | + | chr3_1:73781067-73781086 | Msa0374340:intron | 50.0% |
| TTTATATCGAGCTGGGGCAC+AGG | + | chr3_1:73781115-73781134 | Msa0374340:intron | 50.0% | |
| CAGACCTTACAGACGGGTAA+GGG | - | chr3_1:73781517-73781536 | None:intergenic | 50.0% | |
| CTCGATGATTAAGGCTGGTG+GGG | + | chr3_1:73781803-73781822 | Msa0374340:CDS | 50.0% | |
| TTACTGTGCCTTAGACGTGC+CGG | + | chr3_1:73781867-73781886 | Msa0374340:CDS | 50.0% | |
| ! | ATTGAGCTCTCTGGCCTTCT+GGG | - | chr3_1:73781990-73782009 | None:intergenic | 50.0% |
| GAACAAGTACGCACGGGACA+TGG | - | chr3_1:73777306-73777325 | None:intergenic | 55.0% | |
| !! | ACCCCAATTGGTGCTATGCC+CGG | + | chr3_1:73778237-73778256 | Msa0374340:CDS | 55.0% |
| TCCGGGCATAGCACCAATTG+GGG | - | chr3_1:73778241-73778260 | None:intergenic | 55.0% | |
| CATCCGGGCATAGCACCAAT+TGG | - | chr3_1:73778243-73778262 | None:intergenic | 55.0% | |
| CAACCAAGCCTGTAGCATCC+GGG | - | chr3_1:73778258-73778277 | None:intergenic | 55.0% | |
| CCAACCAAGCCTGTAGCATC+CGG | - | chr3_1:73778259-73778278 | None:intergenic | 55.0% | |
| ! | GAGACACGGACTGTTGCAAG+AGG | + | chr3_1:73778278-73778297 | Msa0374340:CDS | 55.0% |
| TCTCCTGTGGGGGTCTAAAG+GGG | - | chr3_1:73778982-73779001 | None:intergenic | 55.0% | |
| CATCTCCTGTGGGGGTCTAA+AGG | - | chr3_1:73778984-73779003 | None:intergenic | 55.0% | |
| TTAGACCCCCACAGGAGATG+AGG | + | chr3_1:73778984-73779003 | Msa0374340:intron | 55.0% | |
| GTATGCCTCATCTCCTGTGG+GGG | - | chr3_1:73778992-73779011 | None:intergenic | 55.0% | |
| TGACCACATCTGCTCCAGCA+CGG | - | chr3_1:73779900-73779919 | None:intergenic | 55.0% | |
| ! | AGCCCCAGCGATATGATGGA+TGG | + | chr3_1:73779919-73779938 | Msa0374340:CDS | 55.0% |
| GAACCCGGCAAACTACAGAG+AGG | + | chr3_1:73780815-73780834 | Msa0374340:CDS | 55.0% | |
| TTGCATGTGCAGGTGAAGCC+TGG | + | chr3_1:73780971-73780990 | Msa0374340:intron | 55.0% | |
| TGCATGTGCAGGTGAAGCCT+GGG | + | chr3_1:73780972-73780991 | Msa0374340:intron | 55.0% | |
| GCTGCCAATTGCAGCATACC+AGG | + | chr3_1:73781039-73781058 | Msa0374340:CDS | 55.0% | |
| GAATGGGCCAGAGAAGAACC+TGG | - | chr3_1:73781060-73781079 | None:intergenic | 55.0% | |
| ! | GAGCTGGGGCACAGGTTTTA+TGG | + | chr3_1:73781123-73781142 | Msa0374340:intron | 55.0% |
| CCAGACCTTACAGACGGGTA+AGG | - | chr3_1:73781518-73781537 | None:intergenic | 55.0% | |
| CCTTACCCGTCTGTAAGGTC+TGG | + | chr3_1:73781515-73781534 | Msa0374340:intron | 55.0% | |
| ! | GGGTAGGGTGTCAAGCATCA+TGG | - | chr3_1:73781658-73781677 | None:intergenic | 55.0% |
| ! | CATTGAGCTCTCTGGCCTTC+TGG | - | chr3_1:73781991-73782010 | None:intergenic | 55.0% |
| TTCGAAGCCGCTGTTGTCGC+TGG | + | chr3_1:73777642-73777661 | Msa0374340:CDS | 60.0% | |
| CGACGAGGACGCCTCTGAAT+TGG | - | chr3_1:73777848-73777867 | None:intergenic | 60.0% | |
| GGTGAGGAGGACACCCCAAT+TGG | + | chr3_1:73778225-73778244 | Msa0374340:intron | 60.0% | |
| GTGCTATGCCCGGATGCTAC+AGG | + | chr3_1:73778247-73778266 | Msa0374340:CDS | 60.0% | |
| ATGCCCGGATGCTACAGGCT+TGG | + | chr3_1:73778252-73778271 | Msa0374340:CDS | 60.0% | |
| ! | CCGGATGCTACAGGCTTGGT+TGG | + | chr3_1:73778256-73778275 | Msa0374340:CDS | 60.0% |
| TTCCCCCTTTAGACCCCCAC+AGG | + | chr3_1:73778976-73778995 | Msa0374340:intron | 60.0% | |
| CTCCTGTGGGGGTCTAAAGG+GGG | - | chr3_1:73778981-73779000 | None:intergenic | 60.0% | |
| GACCACATCTGCTCCAGCAC+GGG | - | chr3_1:73779899-73779918 | None:intergenic | 60.0% | |
| GGTCAGCCCCAGCGATATGA+TGG | + | chr3_1:73779915-73779934 | Msa0374340:CDS | 60.0% | |
| CGAGCAGCTCTCGATGCTGA+AGG | + | chr3_1:73779958-73779977 | Msa0374340:CDS | 60.0% | |
| !! | TGTCAGCACCGGCACGTCTA+AGG | - | chr3_1:73781878-73781897 | None:intergenic | 60.0% |
| GCCTCCTGTACCGCCTACAC+CGG | + | chr3_1:73777680-73777699 | Msa0374340:CDS | 65.0% | |
| TGCACCTGCTGGAACGCCAG+TGG | + | chr3_1:73777704-73777723 | Msa0374340:CDS | 65.0% | |
| GTCACCACTGGCGTTCCAGC+AGG | - | chr3_1:73777711-73777730 | None:intergenic | 65.0% | |
| ! | GGCGGTACAGGAGGCGCATC+CGG | - | chr3_1:73777675-73777694 | None:intergenic | 70.0% |
| GCCGGTGTAGGCGGTACAGG+AGG | - | chr3_1:73777684-73777703 | None:intergenic | 70.0% | |
| GCAGCCGGTGTAGGCGGTAC+AGG | - | chr3_1:73777687-73777706 | None:intergenic | 70.0% | |
| GCAGGTGCAGCCGGTGTAGG+CGG | - | chr3_1:73777693-73777712 | None:intergenic | 70.0% | |
| CCAGCAGGTGCAGCCGGTGT+AGG | - | chr3_1:73777696-73777715 | None:intergenic | 70.0% | |
| ! | CCTACACCGGCTGCACCTGC+TGG | + | chr3_1:73777693-73777712 | Msa0374340:CDS | 70.0% |
| GGCGTTCCAGCAGGTGCAGC+CGG | - | chr3_1:73777702-73777721 | None:intergenic | 70.0% | |
| GGCCCGTGCTGGAGCAGATG+TGG | + | chr3_1:73779894-73779913 | Msa0374340:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73777100 | 73782250 | 73777100 | ID=Msa0374340;Name=Msa0374340 |
| chr3_1 | mRNA | 73777100 | 73782250 | 73777100 | ID=Msa0374340-mRNA-1;Parent=Msa0374340;Name=Msa0374340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=383|1|1|1|1|1|12|294|413 |
| chr3_1 | exon | 73777100 | 73777737 | 73777100 | ID=Msa0374340-mRNA-1:exon:16807;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73777845 | 73777956 | 73777845 | ID=Msa0374340-mRNA-1:exon:16808;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73778226 | 73778299 | 73778226 | ID=Msa0374340-mRNA-1:exon:16809;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73778841 | 73778909 | 73778841 | ID=Msa0374340-mRNA-1:exon:16810;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73778988 | 73779071 | 73778988 | ID=Msa0374340-mRNA-1:exon:16811;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73779165 | 73779234 | 73779165 | ID=Msa0374340-mRNA-1:exon:16812;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73779664 | 73779719 | 73779664 | ID=Msa0374340-mRNA-1:exon:16813;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73779895 | 73780016 | 73779895 | ID=Msa0374340-mRNA-1:exon:16814;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73780634 | 73780705 | 73780634 | ID=Msa0374340-mRNA-1:exon:16815;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73780806 | 73780887 | 73780806 | ID=Msa0374340-mRNA-1:exon:16816;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73780983 | 73781060 | 73780983 | ID=Msa0374340-mRNA-1:exon:16817;Parent=Msa0374340-mRNA-1 |
| chr3_1 | exon | 73781789 | 73782250 | 73781789 | ID=Msa0374340-mRNA-1:exon:16818;Parent=Msa0374340-mRNA-1 |
| chr3_1 | five_prime_UTR | 73777100 | 73777482 | 73777100 | ID=Msa0374340-mRNA-1:five_prime_utr;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73777483 | 73777737 | 73777483 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73777845 | 73777956 | 73777845 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73778226 | 73778299 | 73778226 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73778841 | 73778909 | 73778841 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73778988 | 73779071 | 73778988 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73779165 | 73779234 | 73779165 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73779664 | 73779719 | 73779664 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73779895 | 73780016 | 73779895 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73780634 | 73780705 | 73780634 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73780806 | 73780887 | 73780806 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73780983 | 73781060 | 73780983 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | CDS | 73781789 | 73781956 | 73781789 | ID=Msa0374340-mRNA-1:cds;Parent=Msa0374340-mRNA-1 |
| chr3_1 | three_prime_UTR | 73781957 | 73782250 | 73781957 | ID=Msa0374340-mRNA-1:three_prime_utr;Parent=Msa0374340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
