Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374420 | XP_003602068.1 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374420 | sp|P30124|HEM2_PEA | 94.472 | 398 | 21 | 1 | 17 | 413 | 1 | 398 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374420 | G7J506 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025290 | Msa0374420 | 0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa0035050 | Msa0374420 | 0.821088 | 4.862590e-53 | -8.615850e-47 |
| Msa0043850 | Msa0374420 | -0.813653 | 2.295191e-51 | -8.615850e-47 |
| Msa0051960 | Msa0374420 | -0.801651 | 8.143610e-49 | -8.615850e-47 |
| Msa0072600 | Msa0374420 | 0.851294 | 9.749021e-61 | -8.615850e-47 |
| Msa0082230 | Msa0374420 | -0.834488 | 2.911024e-56 | -8.615850e-47 |
| Msa0082420 | Msa0374420 | -0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa0090510 | Msa0374420 | -0.847432 | 1.160875e-59 | -8.615850e-47 |
| Msa0093950 | Msa0374420 | 0.806391 | 8.414705e-50 | -8.615850e-47 |
| Msa0099910 | Msa0374420 | -0.821520 | 3.865620e-53 | -8.615850e-47 |
| Msa0101960 | Msa0374420 | -0.812125 | 4.961480e-51 | -8.615850e-47 |
| Msa0114790 | Msa0374420 | -0.803091 | 4.112118e-49 | -8.615850e-47 |
| Msa0137980 | Msa0374420 | -0.807909 | 4.014841e-50 | -8.615850e-47 |
| Msa0139550 | Msa0374420 | 0.837477 | 5.079142e-57 | -8.615850e-47 |
| Msa0183910 | Msa0374420 | -0.826448 | 2.697792e-54 | -8.615850e-47 |
| Msa0187590 | Msa0374420 | 0.809827 | 1.560867e-50 | -8.615850e-47 |
| Msa0220400 | Msa0374420 | 0.826802 | 2.221139e-54 | -8.615850e-47 |
| Msa0234410 | Msa0374420 | 0.822986 | 1.766396e-53 | -8.615850e-47 |
| Msa0367540 | Msa0374420 | 0.801630 | 8.221937e-49 | -8.615850e-47 |
| Msa0374340 | Msa0374420 | 0.996065 | 5.299904e-223 | -8.615850e-47 |
| Msa0374420 | Msa0383870 | 0.832318 | 1.012003e-55 | -8.615850e-47 |
| Msa0374420 | Msa0403470 | 0.897582 | 1.222424e-76 | -8.615850e-47 |
| Msa0374420 | Msa0403480 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
| Msa0374420 | Msa0415160 | 0.818748 | 1.667337e-52 | -8.615850e-47 |
| Msa0374420 | Msa0428200 | -0.823690 | 1.209169e-53 | -8.615850e-47 |
| Msa0374420 | Msa0460170 | 0.802478 | 5.504333e-49 | -8.615850e-47 |
| Msa0374420 | Msa0469870 | 0.906522 | 1.356572e-80 | -8.615850e-47 |
| Msa0374420 | Msa0480090 | 0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0374420 | Msa0500700 | 0.806102 | 9.684028e-50 | -8.615850e-47 |
| Msa0374420 | Msa0510710 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0374420 | Msa0512950 | 0.809060 | 2.280291e-50 | -8.615850e-47 |
| Msa0374420 | Msa0515440 | 0.956991 | 7.942885e-115 | -8.615850e-47 |
| Msa0374420 | Msa0524470 | 0.810442 | 1.150560e-50 | -8.615850e-47 |
| Msa0374420 | Msa0529780 | 0.825291 | 5.079381e-54 | -8.615850e-47 |
| Msa0374420 | Msa0548650 | 0.858412 | 8.387275e-63 | -8.615850e-47 |
| Msa0374420 | Msa0572550 | 0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa0374420 | Msa0589260 | 0.829886 | 4.004088e-55 | -8.615850e-47 |
| Msa0374420 | Msa0603690 | 0.808978 | 2.374198e-50 | -8.615850e-47 |
| Msa0374420 | Msa0611540 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0374420 | Msa0637930 | 0.811953 | 5.409163e-51 | -8.615850e-47 |
| Msa0374420 | Msa0745250 | 0.821471 | 3.967921e-53 | -8.615850e-47 |
| Msa0374420 | Msa0781330 | 0.832832 | 7.546505e-56 | -8.615850e-47 |
| Msa0374420 | Msa0823540 | -0.801037 | 1.087758e-48 | -8.615850e-47 |
| Msa0374420 | Msa0826800 | 0.825136 | 5.525550e-54 | -8.615850e-47 |
| Msa0374420 | Msa0841410 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0374420 | Msa0865520 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0374420 | Msa0881530 | 0.811450 | 6.957362e-51 | -8.615850e-47 |
| Msa0374420 | Msa0944020 | -0.821686 | 3.538334e-53 | -8.615850e-47 |
| Msa0374420 | Msa0960880 | 0.803420 | 3.515746e-49 | -8.615850e-47 |
| Msa0374420 | Msa0968470 | 0.905169 | 5.699667e-80 | -8.615850e-47 |
| Msa0374420 | Msa0982090 | 0.816221 | 6.182987e-52 | -8.615850e-47 |
| Msa0374420 | Msa1031460 | -0.821219 | 4.535347e-53 | -8.615850e-47 |
| Msa0374420 | Msa1061740 | -0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa0374420 | Msa1062040 | -0.814767 | 1.302483e-51 | -8.615850e-47 |
| Msa0374420 | Msa1070540 | -0.827207 | 1.776843e-54 | -8.615850e-47 |
| Msa0374420 | Msa1079720 | 0.867919 | 9.590449e-66 | -8.615850e-47 |
| Msa0374420 | Msa1080610 | 0.812153 | 4.891894e-51 | -8.615850e-47 |
| Msa0374420 | Msa1080680 | 0.812692 | 3.730013e-51 | -8.615850e-47 |
| Msa0374420 | Msa1101240 | -0.829210 | 5.845899e-55 | -8.615850e-47 |
| Msa0374420 | Msa1124530 | 0.884505 | 1.810471e-71 | -8.615850e-47 |
| Msa0374420 | Msa1129300 | 0.826787 | 2.239677e-54 | -8.615850e-47 |
| Msa0374420 | Msa1150780 | -0.803419 | 3.517286e-49 | -8.615850e-47 |
| Msa0374420 | Msa1152780 | 0.821690 | 3.531223e-53 | -8.615850e-47 |
| Msa0374420 | Msa1167150 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0374420 | Msa1190100 | 0.822128 | 2.795378e-53 | -8.615850e-47 |
| Msa0374420 | Msa1208450 | 0.886853 | 2.382097e-72 | -8.615850e-47 |
| Msa0374420 | Msa1209870 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0374420 | Msa1211060 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0374420 | Msa1229480 | -0.803823 | 2.900551e-49 | -8.615850e-47 |
| Msa0374420 | Msa1258030 | 0.826986 | 2.007387e-54 | -8.615850e-47 |
| Msa0374420 | Msa1272010 | -0.813201 | 2.885052e-51 | -8.615850e-47 |
| Msa0374420 | Msa1277670 | -0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa0374420 | Msa1298390 | 0.901139 | 3.623782e-78 | -8.615850e-47 |
| Msa0374420 | Msa1325410 | 0.826477 | 2.655246e-54 | -8.615850e-47 |
| Msa0374420 | Msa1346840 | -0.805584 | 1.244042e-49 | -8.615850e-47 |
| Msa0374420 | Msa1359400 | -0.803935 | 2.749579e-49 | -8.615850e-47 |
| Msa0374420 | Msa1363820 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
| Msa0374420 | Msa1364350 | 0.825890 | 3.662094e-54 | -8.615850e-47 |
| Msa0374420 | Msa1367560 | 0.808626 | 2.824360e-50 | -8.615850e-47 |
| Msa0374420 | Msa1369920 | 0.852462 | 4.543675e-61 | -8.615850e-47 |
| Msa0374420 | Msa1375610 | 0.806696 | 7.256494e-50 | -8.615850e-47 |
| Msa0374420 | Msa1382380 | 0.814736 | 1.323267e-51 | -8.615850e-47 |
| Msa0374420 | Msa1407880 | -0.807391 | 5.172056e-50 | -8.615850e-47 |
| Msa0374420 | Msa1419840 | -0.807754 | 4.331150e-50 | -8.615850e-47 |
| Msa0318680 | Msa0374420 | -0.803633 | 3.176028e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374420 | MtrunA17_Chr3g0124871 | 98.789 | 413 | 5 | 0 | 1 | 413 | 1 | 413 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374420 | AT1G69740.1 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374420 | AT1G69740.3 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374420 | AT1G69740.2 | 77.778 | 432 | 72 | 3 | 3 | 413 | 2 | 430 | 0.0 | 649 |
| Msa0374420 | AT1G44318.1 | 70.739 | 352 | 94 | 2 | 62 | 413 | 59 | 401 | 0.0 | 514 |
Find 137 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAAGCATCTGGAATTT+TGG | 0.073758 | 3_1:-73892644 | None:intergenic |
| CTTTATTCACAACAGGTTTC+TGG | 0.142989 | 3_1:+73895531 | Msa0374420:intron |
| GAAGCCTGGGCTTCCTTATT+TGG | 0.157019 | 3_1:+73894742 | Msa0374420:CDS |
| CATTGAGCTCTCTGGCCTTC+TGG | 0.170414 | 3_1:-73895745 | None:intergenic |
| TCAATCTCCGATTACGATTA+TGG | 0.171474 | 3_1:+73891221 | Msa0374420:exon |
| TACACATCGATCCGCGTTTC+AGG | 0.190551 | 3_1:+73891640 | Msa0374420:CDS |
| GAGTCCAATGCTTCCCTAAA+TGG | 0.193544 | 3_1:-73894413 | None:intergenic |
| AAGATAAGTTATTATTATTA+AGG | 0.197659 | 3_1:-73891084 | None:intergenic |
| ATTCAGTTTCACCTCCTTAT+TGG | 0.222175 | 3_1:+73891115 | Msa0374420:five_prime_UTR |
| TTACACCATTTGTAAGATAA+TGG | 0.240086 | 3_1:-73895842 | None:intergenic |
| GTGAGATTCTTCAAACATTT+AGG | 0.248335 | 3_1:+73895710 | Msa0374420:exon |
| AACGTTGGTGTGTGAATTTA+AGG | 0.252371 | 3_1:-73891277 | None:intergenic |
| TCATGCCCATCTGAAGAATA+TGG | 0.266166 | 3_1:-73892949 | None:intergenic |
| ATTGAGCTCTCTGGCCTTCT+GGG | 0.311835 | 3_1:-73895744 | None:intergenic |
| TTTAAGGTTAAGGGTGTGTT+TGG | 0.329848 | 3_1:-73891261 | None:intergenic |
| TACACCATTTGTAAGATAAT+GGG | 0.335377 | 3_1:-73895841 | None:intergenic |
| CGACGAGGACGCCTCTGAAT+TGG | 0.335567 | 3_1:-73891602 | None:intergenic |
| TGGTGAGTACTCGATGATTA+AGG | 0.335831 | 3_1:+73895551 | Msa0374420:CDS |
| CAAAATTCCAGATGCTTTGA+AGG | 0.350403 | 3_1:+73892645 | Msa0374420:CDS |
| GTGTGTGAATTTAAGGTTAA+GGG | 0.356716 | 3_1:-73891270 | None:intergenic |
| AGCCTTATGATATCCAAATA+AGG | 0.360550 | 3_1:-73894755 | None:intergenic |
| AAAGCCTCTCTGTAGTTTGC+CGG | 0.370396 | 3_1:-73894576 | None:intergenic |
| TTCCTTATTTGGATATCATA+AGG | 0.373814 | 3_1:+73894753 | Msa0374420:CDS |
| TCTCTTGTTCGTTTCACGTT+CGG | 0.386854 | 3_1:-73890859 | None:intergenic |
| CTGTGTTCACTTACAAGATC+AGG | 0.387731 | 3_1:-73892820 | None:intergenic |
| AAACTAGATAACAACCAATA+AGG | 0.389704 | 3_1:-73891129 | None:intergenic |
| GAAGAGAAAAGGAACGTTGC+TGG | 0.392659 | 3_1:+73890880 | Msa0374420:five_prime_UTR |
| AATAGAACCTTCAAAGCATC+TGG | 0.395086 | 3_1:-73892652 | None:intergenic |
| GAAATTGAATAAAATTTGTC+TGG | 0.395890 | 3_1:+73891027 | Msa0374420:five_prime_UTR |
| TCATAAACATTTACCGCAAA+AGG | 0.396182 | 3_1:-73895957 | None:intergenic |
| TGTCAGCACCGGCACGTCTA+AGG | 0.398953 | 3_1:-73895632 | None:intergenic |
| TCTATATGACAGAAGGCTAA+TGG | 0.402425 | 3_1:-73895981 | None:intergenic |
| CTTGTAGAGCAAAATATGTT+AGG | 0.407581 | 3_1:-73895659 | None:intergenic |
| CCTACACCGGCTGCACCTGC+TGG | 0.413535 | 3_1:+73891450 | Msa0374420:CDS |
| CATCCGGGCATAGCACCAAT+TGG | 0.415152 | 3_1:-73891997 | None:intergenic |
| GGCGGTACAGGAGGCGCATC+CGG | 0.419126 | 3_1:-73891429 | None:intergenic |
| GCAGCCGGTGTAGGCGGTAC+AGG | 0.421060 | 3_1:-73891441 | None:intergenic |
| AGTCCAATGCTTCCCTAAAT+GGG | 0.431083 | 3_1:-73894412 | None:intergenic |
| AGAAGGAGCTGATATTCTAT+TGG | 0.434691 | 3_1:+73894623 | Msa0374420:CDS |
| TTAGCCTTCTGTCATATAGA+AGG | 0.436080 | 3_1:+73895984 | Msa0374420:three_prime_UTR |
| TAGTTCTTCAATGGTAGTGC+TGG | 0.437216 | 3_1:-73891309 | None:intergenic |
| ATCCGGGCATAGCACCAATT+GGG | 0.443550 | 3_1:-73891996 | None:intergenic |
| GAAGAAGCCATAATCGTAAT+CGG | 0.444487 | 3_1:-73891228 | None:intergenic |
| TTCGAAGCCGCTGTTGTCGC+TGG | 0.446142 | 3_1:+73891399 | Msa0374420:CDS |
| TCAACCCATTATCTTACAAA+TGG | 0.451285 | 3_1:+73895837 | Msa0374420:three_prime_UTR |
| GTCAAATGCATTGAGCTCTC+TGG | 0.453896 | 3_1:-73895753 | None:intergenic |
| CCAACCAAGCCTGTAGCATC+CGG | 0.454753 | 3_1:-73892013 | None:intergenic |
| TAAAATGATTGATGAAGAAA+AGG | 0.462660 | 3_1:+73895587 | Msa0374420:CDS |
| TGGCCCATTTAGGGAAGCAT+TGG | 0.464040 | 3_1:+73894409 | Msa0374420:CDS |
| TCGAACTATACGATTACTTA+AGG | 0.469401 | 3_1:+73892789 | Msa0374420:CDS |
| AGAACCTGGTATGCTGCAAT+TGG | 0.471730 | 3_1:-73894800 | None:intergenic |
| TAGTTGGTGAAGGGTAGAAA+TGG | 0.472186 | 3_1:+73891005 | Msa0374420:five_prime_UTR |
| TTGCATGTGCAGGTGAAGCC+TGG | 0.473131 | 3_1:+73894728 | Msa0374420:intron |
| CCAGCAGGTGCAGCCGGTGT+AGG | 0.473347 | 3_1:-73891450 | None:intergenic |
| GGCGTTCCAGCAGGTGCAGC+CGG | 0.474188 | 3_1:-73891456 | None:intergenic |
| TTGTATGCCTCATCTCCTGT+GGG | 0.474392 | 3_1:-73892748 | None:intergenic |
| GGTGAGGAGGACACCCCAAT+TGG | 0.474774 | 3_1:+73891982 | Msa0374420:intron |
| GTCACCACTGGCGTTCCAGC+AGG | 0.476216 | 3_1:-73891465 | None:intergenic |
| GTGCTATGCCCGGATGCTAC+AGG | 0.477134 | 3_1:+73892004 | Msa0374420:CDS |
| ACCCCAATTGGTGCTATGCC+CGG | 0.482806 | 3_1:+73891994 | Msa0374420:CDS |
| GACCACATCTGCTCCAGCAC+GGG | 0.485822 | 3_1:-73893653 | None:intergenic |
| GGCTTCGAAATCTGCATCAC+TGG | 0.486265 | 3_1:-73891385 | None:intergenic |
| TTCTAGTTATTCTGCTGTTG+AGG | 0.493613 | 3_1:-73895903 | None:intergenic |
| GGTGTGTGAATTTAAGGTTA+AGG | 0.494498 | 3_1:-73891271 | None:intergenic |
| AACGAACAAGAGAAGAGAAA+AGG | 0.497772 | 3_1:+73890869 | Msa0374420:five_prime_UTR |
| AAGCCTCTCTGTAGTTTGCC+GGG | 0.500631 | 3_1:-73894575 | None:intergenic |
| AAGCTCAAATAGTTCTTCAA+TGG | 0.500921 | 3_1:-73891318 | None:intergenic |
| TGATGAAGAAAAGGTGATGA+TGG | 0.507074 | 3_1:+73895596 | Msa0374420:CDS |
| CGACCATCCATCATATCGCT+GGG | 0.509074 | 3_1:-73893679 | None:intergenic |
| GACGGCATTGTTAGAGAAGA+TGG | 0.510196 | 3_1:+73892970 | Msa0374420:CDS |
| CATGCCCATCTGAAGAATAT+GGG | 0.510541 | 3_1:-73892948 | None:intergenic |
| ACGACCATCCATCATATCGC+TGG | 0.517199 | 3_1:-73893680 | None:intergenic |
| AGTGGATAAACAAAATTAGC+AGG | 0.519439 | 3_1:-73891677 | None:intergenic |
| TTAAGTAATCGTATAGTTCG+AGG | 0.519833 | 3_1:-73892787 | None:intergenic |
| GAACAAGTACGCACGGGACA+TGG | 0.523078 | 3_1:-73891060 | None:intergenic |
| CGAGCAGCTCTCGATGCTGA+AGG | 0.524524 | 3_1:+73893715 | Msa0374420:CDS |
| GCTGCCAATTGCAGCATACC+AGG | 0.526983 | 3_1:+73894796 | Msa0374420:CDS |
| GGCCCGTGCTGGAGCAGATG+TGG | 0.528623 | 3_1:+73893651 | Msa0374420:intron |
| CTCGATGATTAAGGCTGGTG+GGG | 0.530917 | 3_1:+73895560 | Msa0374420:CDS |
| TGACCGACTTGCAGAATAGT+TGG | 0.533237 | 3_1:+73890989 | Msa0374420:five_prime_UTR |
| TGACCACATCTGCTCCAGCA+CGG | 0.535344 | 3_1:-73893654 | None:intergenic |
| TAATTCAGGTTGCAAAAGCA+CGG | 0.536608 | 3_1:+73892590 | Msa0374420:intron |
| GTTGCAAAAGCACGGGATGT+TGG | 0.543180 | 3_1:+73892598 | Msa0374420:CDS |
| GGTCAGCCCCAGCGATATGA+TGG | 0.544470 | 3_1:+73893672 | Msa0374420:CDS |
| TACAGGCTTGGTTGGAGACA+CGG | 0.544880 | 3_1:+73892021 | Msa0374420:CDS |
| GCAGGTGCAGCCGGTGTAGG+CGG | 0.548510 | 3_1:-73891447 | None:intergenic |
| TACTCGATGATTAAGGCTGG+TGG | 0.549281 | 3_1:+73895558 | Msa0374420:CDS |
| TTAGACCCATATTCTTCAGA+TGG | 0.549974 | 3_1:+73892943 | Msa0374420:CDS |
| AAGGAGGTGAAACTGAATGA+TGG | 0.552578 | 3_1:-73891110 | None:intergenic |
| ATTGTATGCCTCATCTCCTG+TGG | 0.553141 | 3_1:-73892749 | None:intergenic |
| GATGAGGCATACAATGAGAA+TGG | 0.554516 | 3_1:+73892757 | Msa0374420:CDS |
| ATGCCCGGATGCTACAGGCT+TGG | 0.560235 | 3_1:+73892009 | Msa0374420:CDS |
| TGCATGTGCAGGTGAAGCCT+GGG | 0.561269 | 3_1:+73894729 | Msa0374420:intron |
| ATATCCAAATAAGGAAGCCC+AGG | 0.561431 | 3_1:-73894746 | None:intergenic |
| GAGAGGCTTTGACTGAAATG+AGG | 0.562495 | 3_1:+73894589 | Msa0374420:CDS |
| AATTCAGGTTGCAAAAGCAC+GGG | 0.565064 | 3_1:+73892591 | Msa0374420:intron |
| TAGACCCATATTCTTCAGAT+GGG | 0.565926 | 3_1:+73892944 | Msa0374420:CDS |
| ACTCGATGATTAAGGCTGGT+GGG | 0.569222 | 3_1:+73895559 | Msa0374420:CDS |
| CCGGATGCTACAGGCTTGGT+TGG | 0.571140 | 3_1:+73892013 | Msa0374420:CDS |
| CAACCAAGCCTGTAGCATCC+GGG | 0.572018 | 3_1:-73892012 | None:intergenic |
| TGGTATGCTGCAATTGGCAG+CGG | 0.572258 | 3_1:-73894794 | None:intergenic |
| TTGTAAACAAGCTGTAGCCC+AGG | 0.575741 | 3_1:+73893455 | Msa0374420:CDS |
| TGTTGTCGCTGGTAATGTGC+CGG | 0.576305 | 3_1:+73891410 | Msa0374420:CDS |
| TGCACCTGCTGGAACGCCAG+TGG | 0.583715 | 3_1:+73891461 | Msa0374420:CDS |
| TTACTGTGCCTTAGACGTGC+CGG | 0.589296 | 3_1:+73895624 | Msa0374420:CDS |
| ACTTGCAGAATAGTTGGTGA+AGG | 0.589843 | 3_1:+73890995 | Msa0374420:five_prime_UTR |
| GTATGCCTCATCTCCTGTGG+GGG | 0.598288 | 3_1:-73892746 | None:intergenic |
| TTAGCCTTCTATATGACAGA+AGG | 0.598289 | 3_1:-73895988 | None:intergenic |
| AGAGGCTTTGACTGAAATGA+GGG | 0.601731 | 3_1:+73894590 | Msa0374420:CDS |
| TATTCTTCAGATGGGCATGA+CGG | 0.608908 | 3_1:+73892952 | Msa0374420:CDS |
| GAGACACGGACTGTTGCAAG+AGG | 0.609699 | 3_1:+73892035 | Msa0374420:CDS |
| TGCTGGTTTAAGATCAACGT+TGG | 0.610444 | 3_1:-73891292 | None:intergenic |
| TGTTAGGATGATGTCAGCAC+CGG | 0.612290 | 3_1:-73895643 | None:intergenic |
| GCCGGTGTAGGCGGTACAGG+AGG | 0.615236 | 3_1:-73891438 | None:intergenic |
| TGTGTTCACTTACAAGATCA+GGG | 0.616355 | 3_1:-73892819 | None:intergenic |
| AGCCCCAGCGATATGATGGA+TGG | 0.618898 | 3_1:+73893676 | Msa0374420:CDS |
| ATGAGGGAAGATGAATCAGA+AGG | 0.619265 | 3_1:+73894606 | Msa0374420:CDS |
| GAGTACTCGATGATTAAGGC+TGG | 0.624101 | 3_1:+73895555 | Msa0374420:CDS |
| TTAAGGTGAACAAGTACGCA+CGG | 0.624642 | 3_1:-73891067 | None:intergenic |
| CTTGCAGAATAGTTGGTGAA+GGG | 0.630920 | 3_1:+73890996 | Msa0374420:five_prime_UTR |
| TCCGGGCATAGCACCAATTG+GGG | 0.638719 | 3_1:-73891995 | None:intergenic |
| CTCACAAGTGAAGTCACCAC+TGG | 0.642836 | 3_1:-73891477 | None:intergenic |
| TGTATGCCTCATCTCCTGTG+GGG | 0.643917 | 3_1:-73892747 | None:intergenic |
| CAAAAGCTATCAGATGAACC+CGG | 0.644138 | 3_1:+73894557 | Msa0374420:intron |
| CACATTACCAGCGACAACAG+CGG | 0.644957 | 3_1:-73891406 | None:intergenic |
| GCCTCCTGTACCGCCTACAC+CGG | 0.648035 | 3_1:+73891437 | Msa0374420:CDS |
| CTAGATAACAACCAATAAGG+AGG | 0.653612 | 3_1:-73891126 | None:intergenic |
| GCTCAATGCATTTGACAGTG+TGG | 0.658784 | 3_1:+73895760 | Msa0374420:three_prime_UTR |
| TAAGGTGAACAAGTACGCAC+GGG | 0.662308 | 3_1:-73891066 | None:intergenic |
| GATATGATGGATGGTCGTGT+TGG | 0.663532 | 3_1:+73893685 | Msa0374420:CDS |
| TGGTGTAATTTAATCAACTG+CGG | 0.675934 | 3_1:+73895857 | Msa0374420:three_prime_UTR |
| TAAAGTTGTTTCCTGAAACG+CGG | 0.676695 | 3_1:-73891651 | None:intergenic |
| TCACCAACTATTCTGCAAGT+CGG | 0.690011 | 3_1:-73890992 | None:intergenic |
| CGTAATCGGAGATTGAAGCG+TGG | 0.716132 | 3_1:-73891214 | None:intergenic |
| GACCATCCATCATATCGCTG+GGG | 0.723541 | 3_1:-73893678 | None:intergenic |
| GAACCCGGCAAACTACAGAG+AGG | 0.774109 | 3_1:+73894572 | Msa0374420:CDS |
| GCTGATCTTCTATTACGACG+AGG | 0.800899 | 3_1:-73891617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAAGTTATTATTATTA+AGG | - | chr3_1:73891087-73891106 | None:intergenic | 10.0% |
| !! | TTTAGAAGATAAAAAAGAAA+AGG | - | chr3_1:73892495-73892514 | None:intergenic | 15.0% |
| !! | TAAACTAAAATTCAATACTA+AGG | - | chr3_1:73892552-73892571 | None:intergenic | 15.0% |
| !!! | TAATCTAAACATTTTACATT+TGG | + | chr3_1:73893111-73893130 | Msa0374420:intron | 15.0% |
| !!! | TTGTGTTTTTATTTTATGAA+AGG | + | chr3_1:73893630-73893649 | Msa0374420:intron | 15.0% |
| !! | AAATAAGTTTAGTAAAAAGA+AGG | + | chr3_1:73893876-73893895 | Msa0374420:intron | 15.0% |
| !!! | AATTTCTATTTTTGTAGAAT+TGG | - | chr3_1:73894265-73894284 | None:intergenic | 15.0% |
| !!! | TAAAAAAACGATTTTAACTC+TGG | + | chr3_1:73890918-73890937 | Msa0374420:five_prime_UTR | 20.0% |
| !! | GAAATTGAATAAAATTTGTC+TGG | + | chr3_1:73891027-73891046 | Msa0374420:five_prime_UTR | 20.0% |
| !!! | ATGTTTTTTTTTTACAGCAA+TGG | - | chr3_1:73892251-73892270 | None:intergenic | 20.0% |
| !!! | AGATTATGCAGATATTTTTT+TGG | + | chr3_1:73892281-73892300 | Msa0374420:intron | 20.0% |
| !!! | AAAAGGTTTTATGTTTGTTT+GGG | - | chr3_1:73892478-73892497 | None:intergenic | 20.0% |
| !! | TATATTCTACCAAAAATTGA+TGG | - | chr3_1:73892693-73892712 | None:intergenic | 20.0% |
| !!! | TTGAGAATGTTATATTTTTC+TGG | + | chr3_1:73892852-73892871 | Msa0374420:intron | 20.0% |
| !!! | TTTTCCAGGAATAATATTAA+AGG | - | chr3_1:73893218-73893237 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAATTTCTTTTCC+AGG | - | chr3_1:73893232-73893251 | None:intergenic | 20.0% |
| !! | GAAATTAAAAAAGAAATCGT+CGG | + | chr3_1:73893238-73893257 | Msa0374420:intron | 20.0% |
| !! | AAATTAAAAAAGAAATCGTC+GGG | + | chr3_1:73893239-73893258 | Msa0374420:intron | 20.0% |
| !!! | TTATATTTTTATATCGAGCT+GGG | + | chr3_1:73894865-73894884 | Msa0374420:intron | 20.0% |
| !! | TAAAATGATTGATGAAGAAA+AGG | + | chr3_1:73895587-73895606 | Msa0374420:CDS | 20.0% |
| !!! | CATAAAATTATTTTACCGCT+TGG | - | chr3_1:73890965-73890984 | None:intergenic | 25.0% |
| ! | AAACTAGATAACAACCAATA+AGG | - | chr3_1:73891132-73891151 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTGTGTGTGTTT+TGG | + | chr3_1:73891568-73891587 | Msa0374420:intron | 25.0% |
| !!! | TATCCACTTTTTATACATGA+AGG | + | chr3_1:73891692-73891711 | Msa0374420:CDS | 25.0% |
| ! | TAACCTTCATGTATAAAAAG+TGG | - | chr3_1:73891698-73891717 | None:intergenic | 25.0% |
| ! | AAATTTAGCTGAGAAAATGT+TGG | + | chr3_1:73892143-73892162 | Msa0374420:intron | 25.0% |
| !!! | AATTCAATACCACTTTTGAA+TGG | - | chr3_1:73892214-73892233 | None:intergenic | 25.0% |
| !! | ATTCAAAAGTGGTATTGAAT+TGG | + | chr3_1:73892213-73892232 | Msa0374420:intron | 25.0% |
| !! | TTCAAAAGTGGTATTGAATT+GGG | + | chr3_1:73892214-73892233 | Msa0374420:intron | 25.0% |
| !! | AATTTTATTCTTTACCGATC+TGG | + | chr3_1:73892307-73892326 | Msa0374420:intron | 25.0% |
| !! | AGAGTTTGGATAGATTTTAT+TGG | + | chr3_1:73892334-73892353 | Msa0374420:intron | 25.0% |
| !! | GAGTTTGGATAGATTTTATT+GGG | + | chr3_1:73892335-73892354 | Msa0374420:intron | 25.0% |
| !!! | GAAAAGGTTTTATGTTTGTT+TGG | - | chr3_1:73892479-73892498 | None:intergenic | 25.0% |
| !!! | AAAAAGATTTTGACGACAAA+AGG | - | chr3_1:73893012-73893031 | None:intergenic | 25.0% |
| ! | ATCATGTTCTGTAACAAAAT+AGG | - | chr3_1:73893041-73893060 | None:intergenic | 25.0% |
| !! | AACATTTTACATTTGGATGA+TGG | + | chr3_1:73893118-73893137 | Msa0374420:intron | 25.0% |
| ! | TGTACCTTTAATATTATTCC+TGG | + | chr3_1:73893211-73893230 | Msa0374420:intron | 25.0% |
| ! | ATGATTTGAACTATTCTTGA+AGG | + | chr3_1:73893325-73893344 | Msa0374420:intron | 25.0% |
| !! | TTATTGACTACAATCAAGAA+AGG | - | chr3_1:73893364-73893383 | None:intergenic | 25.0% |
| ! | GTATATCCTTAATATCTTGT+AGG | + | chr3_1:73893399-73893418 | Msa0374420:intron | 25.0% |
| ! | ATAACTCCTACAAGATATTA+AGG | - | chr3_1:73893408-73893427 | None:intergenic | 25.0% |
| ! | AAGATGTAGTTATATTACCT+GGG | - | chr3_1:73893475-73893494 | None:intergenic | 25.0% |
| ! | AAAGATGTAGTTATATTACC+TGG | - | chr3_1:73893476-73893495 | None:intergenic | 25.0% |
| !!! | AAGTTACCATTATTTTGTTC+AGG | + | chr3_1:73893518-73893537 | Msa0374420:intron | 25.0% |
| !!! | AGTTACCATTATTTTGTTCA+GGG | + | chr3_1:73893519-73893538 | Msa0374420:intron | 25.0% |
| ! | ACTAAATTATGTTAGTGTCT+TGG | - | chr3_1:73893610-73893629 | None:intergenic | 25.0% |
| !!! | TAAACTTATTTCTAAAGCTC+AGG | - | chr3_1:73893867-73893886 | None:intergenic | 25.0% |
| !!! | GGCATTTTTTTTTATTGATC+TGG | + | chr3_1:73893938-73893957 | Msa0374420:intron | 25.0% |
| ! | AGAAATTATGACTAACAAGA+TGG | + | chr3_1:73894278-73894297 | Msa0374420:intron | 25.0% |
| !! | TATCATGCATATTTTCTTGT+CGG | + | chr3_1:73894322-73894341 | Msa0374420:intron | 25.0% |
| !! | TTCTAAATTATGCCGTTTAT+TGG | + | chr3_1:73894358-73894377 | Msa0374420:intron | 25.0% |
| ! | TTATGTATACGATCATAGTT+AGG | + | chr3_1:73894660-73894679 | Msa0374420:intron | 25.0% |
| !! | TTCCTTATTTGGATATCATA+AGG | + | chr3_1:73894753-73894772 | Msa0374420:CDS | 25.0% |
| !!! | CTTATATTTTTATATCGAGC+TGG | + | chr3_1:73894864-73894883 | Msa0374420:intron | 25.0% |
| !!! | TATATTTTTATATCGAGCTG+GGG | + | chr3_1:73894866-73894885 | Msa0374420:intron | 25.0% |
| !!! | TAACCATTTTTGGAAAGAAT+CGG | - | chr3_1:73894965-73894984 | None:intergenic | 25.0% |
| ! | TCTTTCCAAAAATGGTTAAT+CGG | + | chr3_1:73894967-73894986 | Msa0374420:intron | 25.0% |
| !! | CGCTTTATTGTAATAAACTT+TGG | + | chr3_1:73895203-73895222 | Msa0374420:intron | 25.0% |
| ! | AGATAAGATACAAAAACAGT+TGG | + | chr3_1:73895330-73895349 | Msa0374420:intron | 25.0% |
| ! | GTTGTTCATCATAGATATTA+TGG | + | chr3_1:73895386-73895405 | Msa0374420:intron | 25.0% |
| ! | ATTGACTGCTTTAATCTTAA+GGG | - | chr3_1:73895435-73895454 | None:intergenic | 25.0% |
| ! | AATTGACTGCTTTAATCTTA+AGG | - | chr3_1:73895436-73895455 | None:intergenic | 25.0% |
| ! | CATCATTAACATAAAACCAA+AGG | - | chr3_1:73895467-73895486 | None:intergenic | 25.0% |
| !! | TGACAAAAACAACACATTTT+GGG | - | chr3_1:73895820-73895839 | None:intergenic | 25.0% |
| !! | TTGACAAAAACAACACATTT+TGG | - | chr3_1:73895821-73895840 | None:intergenic | 25.0% |
| ! | TACACCATTTGTAAGATAAT+GGG | - | chr3_1:73895844-73895863 | None:intergenic | 25.0% |
| ! | TTACACCATTTGTAAGATAA+TGG | - | chr3_1:73895845-73895864 | None:intergenic | 25.0% |
| !! | TTAATAAAGTCAACCTTTTG+CGG | + | chr3_1:73895944-73895963 | Msa0374420:three_prime_UTR | 25.0% |
| !! | AAAATTATTTTACCGCTTGG+TGG | - | chr3_1:73890962-73890981 | None:intergenic | 30.0% |
| ! | GTGTGTGAATTTAAGGTTAA+GGG | - | chr3_1:73891273-73891292 | None:intergenic | 30.0% |
| AAGCTCAAATAGTTCTTCAA+TGG | - | chr3_1:73891321-73891340 | None:intergenic | 30.0% | |
| AGTGGATAAACAAAATTAGC+AGG | - | chr3_1:73891680-73891699 | None:intergenic | 30.0% | |
| !! | ATACATGAAGGTTAGTCTTA+AGG | + | chr3_1:73891704-73891723 | Msa0374420:intron | 30.0% |
| AAACTCTTGTGAAACTGTTT+CGG | + | chr3_1:73891766-73891785 | Msa0374420:intron | 30.0% | |
| !! | TACATACATTGTTAGCTTGT+AGG | + | chr3_1:73891901-73891920 | Msa0374420:intron | 30.0% |
| ! | AATATTTGAACCCTTTTTGC+AGG | + | chr3_1:73891961-73891980 | Msa0374420:intron | 30.0% |
| ! | TGTTGCAAGAGGTTTTTATA+TGG | + | chr3_1:73892046-73892065 | Msa0374420:intron | 30.0% |
| ATGACATTACCATTCAAAAG+TGG | + | chr3_1:73892202-73892221 | Msa0374420:intron | 30.0% | |
| ! | TCAAAAGTGGTATTGAATTG+GGG | + | chr3_1:73892215-73892234 | Msa0374420:intron | 30.0% |
| TGTAATGAGAAGTTCAACAT+TGG | - | chr3_1:73892371-73892390 | None:intergenic | 30.0% | |
| ! | CAGTGAGCATTTTATAATTC+AGG | + | chr3_1:73892576-73892595 | Msa0374420:intron | 30.0% |
| !! | TTCAAAGCATCTGGAATTTT+GGG | - | chr3_1:73892646-73892665 | None:intergenic | 30.0% |
| TTAAGTAATCGTATAGTTCG+AGG | - | chr3_1:73892790-73892809 | None:intergenic | 30.0% | |
| TCGAACTATACGATTACTTA+AGG | + | chr3_1:73892789-73892808 | Msa0374420:CDS | 30.0% | |
| CAGAACATGATTCATTTCAT+TGG | + | chr3_1:73893050-73893069 | Msa0374420:intron | 30.0% | |
| AGAATCCCTGAACAAAATAA+TGG | - | chr3_1:73893527-73893546 | None:intergenic | 30.0% | |
| AAGTATAGCAAGAAAAACCT+TGG | - | chr3_1:73893576-73893595 | None:intergenic | 30.0% | |
| GCAAAAACAGAAAGTAAGAT+CGG | - | chr3_1:73893806-73893825 | None:intergenic | 30.0% | |
| AAATCGACAATTGCTAATGA+TGG | + | chr3_1:73893916-73893935 | Msa0374420:intron | 30.0% | |
| AATCGACAATTGCTAATGAT+GGG | + | chr3_1:73893917-73893936 | Msa0374420:intron | 30.0% | |
| CTTACAAGTTTGTGTTAAGA+AGG | + | chr3_1:73893967-73893986 | Msa0374420:intron | 30.0% | |
| TATCGATGGCTATCTATTAT+AGG | + | chr3_1:73894002-73894021 | Msa0374420:intron | 30.0% | |
| TCTATTATAGGTTGTAGCAT+TGG | + | chr3_1:73894014-73894033 | Msa0374420:intron | 30.0% | |
| CTATTATAGGTTGTAGCATT+GGG | + | chr3_1:73894015-73894034 | Msa0374420:intron | 30.0% | |
| GTGAAGATATTCAAAATGTG+TGG | + | chr3_1:73894043-73894062 | Msa0374420:intron | 30.0% | |
| TTATGACTAACAAGATGGAT+TGG | + | chr3_1:73894283-73894302 | Msa0374420:intron | 30.0% | |
| ! | TTCATTTTATGGCCCATTTA+GGG | + | chr3_1:73894400-73894419 | Msa0374420:CDS | 30.0% |
| ! | ACGTCTTTTTATCTCCAAAA+CGG | - | chr3_1:73894445-73894464 | None:intergenic | 30.0% |
| TATTTACGTTGCCATATACT+TGG | + | chr3_1:73894524-73894543 | Msa0374420:intron | 30.0% | |
| TATACGATCATAGTTAGGAA+TGG | + | chr3_1:73894665-73894684 | Msa0374420:intron | 30.0% | |
| TTTAGAAAATTTGCATGTGC+AGG | + | chr3_1:73894718-73894737 | Msa0374420:intron | 30.0% | |
| ! | AGCCTTATGATATCCAAATA+AGG | - | chr3_1:73894758-73894777 | None:intergenic | 30.0% |
| TTTATGCCAAGAACTAGAAT+GGG | - | chr3_1:73894833-73894852 | None:intergenic | 30.0% | |
| AATCCGATTCTTTCCAAAAA+TGG | + | chr3_1:73894959-73894978 | Msa0374420:intron | 30.0% | |
| CTTTCCAAAAATGGTTAATC+GGG | + | chr3_1:73894968-73894987 | Msa0374420:intron | 30.0% | |
| ! | AATTCCCGATTAACCATTTT+TGG | - | chr3_1:73894975-73894994 | None:intergenic | 30.0% |
| AGTCAATTAGAGAAAACCTT+TGG | + | chr3_1:73895448-73895467 | Msa0374420:intron | 30.0% | |
| AGAAACCTGTTGTGAATAAA+GGG | - | chr3_1:73895532-73895551 | None:intergenic | 30.0% | |
| CTTGTAGAGCAAAATATGTT+AGG | - | chr3_1:73895662-73895681 | None:intergenic | 30.0% | |
| ! | GATTTTTGTGTGGAGAAAAA+AGG | + | chr3_1:73895688-73895707 | Msa0374420:CDS | 30.0% |
| GTGAGATTCTTCAAACATTT+AGG | + | chr3_1:73895710-73895729 | Msa0374420:exon | 30.0% | |
| ! | GACAAAAACAACACATTTTG+GGG | - | chr3_1:73895819-73895838 | None:intergenic | 30.0% |
| TCAACCCATTATCTTACAAA+TGG | + | chr3_1:73895837-73895856 | Msa0374420:three_prime_UTR | 30.0% | |
| TGGTGTAATTTAATCAACTG+CGG | + | chr3_1:73895857-73895876 | Msa0374420:three_prime_UTR | 30.0% | |
| TCATAAACATTTACCGCAAA+AGG | - | chr3_1:73895960-73895979 | None:intergenic | 30.0% | |
| AACGAACAAGAGAAGAGAAA+AGG | + | chr3_1:73890869-73890888 | Msa0374420:five_prime_UTR | 35.0% | |
| ATTCAGTTTCACCTCCTTAT+TGG | + | chr3_1:73891115-73891134 | Msa0374420:five_prime_UTR | 35.0% | |
| CTAGATAACAACCAATAAGG+AGG | - | chr3_1:73891129-73891148 | None:intergenic | 35.0% | |
| TCAATCTCCGATTACGATTA+TGG | + | chr3_1:73891221-73891240 | Msa0374420:exon | 35.0% | |
| GAAGAAGCCATAATCGTAAT+CGG | - | chr3_1:73891231-73891250 | None:intergenic | 35.0% | |
| ! | TTTAAGGTTAAGGGTGTGTT+TGG | - | chr3_1:73891264-73891283 | None:intergenic | 35.0% |
| ! | GGTGTGTGAATTTAAGGTTA+AGG | - | chr3_1:73891274-73891293 | None:intergenic | 35.0% |
| AACGTTGGTGTGTGAATTTA+AGG | - | chr3_1:73891280-73891299 | None:intergenic | 35.0% | |
| !! | TTTTGTTTCAGCCAATTCAG+AGG | + | chr3_1:73891591-73891610 | Msa0374420:intron | 35.0% |
| ! | TAAAGTTGTTTCCTGAAACG+CGG | - | chr3_1:73891654-73891673 | None:intergenic | 35.0% |
| !! | GTTAGTCTTAAGGACATGTT+TGG | + | chr3_1:73891714-73891733 | Msa0374420:intron | 35.0% |
| ! | CTTTTTCTGTAGAGCTTTTG+TGG | + | chr3_1:73891866-73891885 | Msa0374420:intron | 35.0% |
| ! | TTGGACTTTGAAAATGTAGC+AGG | + | chr3_1:73892162-73892181 | Msa0374420:intron | 35.0% |
| !! | ACATTGCTTGATTGTTTCTG+AGG | + | chr3_1:73892388-73892407 | Msa0374420:intron | 35.0% |
| !! | TAATTCAGGTTGCAAAAGCA+CGG | + | chr3_1:73892590-73892609 | Msa0374420:intron | 35.0% |
| !! | TCAAAGCATCTGGAATTTTG+GGG | - | chr3_1:73892645-73892664 | None:intergenic | 35.0% |
| !! | CTTCAAAGCATCTGGAATTT+TGG | - | chr3_1:73892647-73892666 | None:intergenic | 35.0% |
| CAAAATTCCAGATGCTTTGA+AGG | + | chr3_1:73892645-73892664 | Msa0374420:CDS | 35.0% | |
| ! | AATAGAACCTTCAAAGCATC+TGG | - | chr3_1:73892655-73892674 | None:intergenic | 35.0% |
| ! | TCACACTTGCCATCAATTTT+TGG | + | chr3_1:73892681-73892700 | Msa0374420:intron | 35.0% |
| TGTGTTCACTTACAAGATCA+GGG | - | chr3_1:73892822-73892841 | None:intergenic | 35.0% | |
| CAACAGTTGAACAAGGATAT+TGG | - | chr3_1:73892897-73892916 | None:intergenic | 35.0% | |
| TTAGACCCATATTCTTCAGA+TGG | + | chr3_1:73892943-73892962 | Msa0374420:CDS | 35.0% | |
| TAGACCCATATTCTTCAGAT+GGG | + | chr3_1:73892944-73892963 | Msa0374420:CDS | 35.0% | |
| AATCGTCGGGAATTAAATTG+TGG | + | chr3_1:73893252-73893271 | Msa0374420:intron | 35.0% | |
| TTACCAACACAAGTTCATAC+AGG | - | chr3_1:73893290-73893309 | None:intergenic | 35.0% | |
| GTTCAAATCATGCAAATCCT+AGG | - | chr3_1:73893316-73893335 | None:intergenic | 35.0% | |
| TGAACTATTCTTGAAGGAAG+TGG | + | chr3_1:73893331-73893350 | Msa0374420:intron | 35.0% | |
| TCATGTGTACATCTTCAACT+AGG | + | chr3_1:73893495-73893514 | Msa0374420:intron | 35.0% | |
| GAAAAACCTTGGAACATAGA+AGG | - | chr3_1:73893565-73893584 | None:intergenic | 35.0% | |
| ATTATGTTAGTGTCTTGGTG+CGG | - | chr3_1:73893605-73893624 | None:intergenic | 35.0% | |
| AGCAAAGTAATTTGATCGCT+TGG | + | chr3_1:73893768-73893787 | Msa0374420:intron | 35.0% | |
| AGTAAGATCGGAAAAGGAAA+TGG | - | chr3_1:73893794-73893813 | None:intergenic | 35.0% | |
| ACAGAAAGTAAGATCGGAAA+AGG | - | chr3_1:73893800-73893819 | None:intergenic | 35.0% | |
| CAATAATTTCCAATGCATGC+AGG | - | chr3_1:73893828-73893847 | None:intergenic | 35.0% | |
| AATTTGAACGCTACGGTTAT+TGG | - | chr3_1:73894160-73894179 | None:intergenic | 35.0% | |
| CTAAAGGAATTTGAACGCTA+CGG | - | chr3_1:73894167-73894186 | None:intergenic | 35.0% | |
| CAAATATAGTGAGATGCTCA+TGG | - | chr3_1:73894205-73894224 | None:intergenic | 35.0% | |
| ! | GTTCATTTTATGGCCCATTT+AGG | + | chr3_1:73894399-73894418 | Msa0374420:CDS | 35.0% |
| ! | TCTTTTTATCTCCAAAACGG+GGG | - | chr3_1:73894442-73894461 | None:intergenic | 35.0% |
| ! | GTCTTTTTATCTCCAAAACG+GGG | - | chr3_1:73894443-73894462 | None:intergenic | 35.0% |
| ! | CGTCTTTTTATCTCCAAAAC+GGG | - | chr3_1:73894444-73894463 | None:intergenic | 35.0% |
| AGAAGGAGCTGATATTCTAT+TGG | + | chr3_1:73894623-73894642 | Msa0374420:CDS | 35.0% | |
| GTTTATGCCAAGAACTAGAA+TGG | - | chr3_1:73894834-73894853 | None:intergenic | 35.0% | |
| TCATGTGAATCTTCCAGTTT+GGG | + | chr3_1:73895025-73895044 | Msa0374420:intron | 35.0% | |
| CTGCTTTAATCTTAAGGGTA+GGG | - | chr3_1:73895430-73895449 | None:intergenic | 35.0% | |
| ACTGCTTTAATCTTAAGGGT+AGG | - | chr3_1:73895431-73895450 | None:intergenic | 35.0% | |
| AAACCTGTTGTGAATAAAGG+GGG | - | chr3_1:73895530-73895549 | None:intergenic | 35.0% | |
| GAAACCTGTTGTGAATAAAG+GGG | - | chr3_1:73895531-73895550 | None:intergenic | 35.0% | |
| CAGAAACCTGTTGTGAATAA+AGG | - | chr3_1:73895533-73895552 | None:intergenic | 35.0% | |
| CTTTATTCACAACAGGTTTC+TGG | + | chr3_1:73895531-73895550 | Msa0374420:intron | 35.0% | |
| TGATGAAGAAAAGGTGATGA+TGG | + | chr3_1:73895596-73895615 | Msa0374420:CDS | 35.0% | |
| ! | TTCTAGTTATTCTGCTGTTG+AGG | - | chr3_1:73895906-73895925 | None:intergenic | 35.0% |
| TCTATATGACAGAAGGCTAA+TGG | - | chr3_1:73895984-73896003 | None:intergenic | 35.0% | |
| ! | TTAGCCTTCTGTCATATAGA+AGG | + | chr3_1:73895984-73896003 | Msa0374420:three_prime_UTR | 35.0% |
| TCTCTTGTTCGTTTCACGTT+CGG | - | chr3_1:73890862-73890881 | None:intergenic | 40.0% | |
| !!! | ACGATTTTAACTCTGGTGAG+TGG | + | chr3_1:73890925-73890944 | Msa0374420:five_prime_UTR | 40.0% |
| TCACCAACTATTCTGCAAGT+CGG | - | chr3_1:73890995-73891014 | None:intergenic | 40.0% | |
| !! | ACTTGCAGAATAGTTGGTGA+AGG | + | chr3_1:73890995-73891014 | Msa0374420:five_prime_UTR | 40.0% |
| !! | CTTGCAGAATAGTTGGTGAA+GGG | + | chr3_1:73890996-73891015 | Msa0374420:five_prime_UTR | 40.0% |
| !! | TAGTTGGTGAAGGGTAGAAA+TGG | + | chr3_1:73891005-73891024 | Msa0374420:five_prime_UTR | 40.0% |
| TTAAGGTGAACAAGTACGCA+CGG | - | chr3_1:73891070-73891089 | None:intergenic | 40.0% | |
| AAGGAGGTGAAACTGAATGA+TGG | - | chr3_1:73891113-73891132 | None:intergenic | 40.0% | |
| !! | TGCTGGTTTAAGATCAACGT+TGG | - | chr3_1:73891295-73891314 | None:intergenic | 40.0% |
| ! | TAGTTCTTCAATGGTAGTGC+TGG | - | chr3_1:73891312-73891331 | None:intergenic | 40.0% |
| CTGACAGTAAAAAGACATGG+AGG | - | chr3_1:73891363-73891382 | None:intergenic | 40.0% | |
| GCTCTGACAGTAAAAAGACA+TGG | - | chr3_1:73891366-73891385 | None:intergenic | 40.0% | |
| TCCAAACTCTTAGACCAGAT+CGG | - | chr3_1:73892324-73892343 | None:intergenic | 40.0% | |
| !! | AATTCAGGTTGCAAAAGCAC+GGG | + | chr3_1:73892591-73892610 | Msa0374420:intron | 40.0% |
| GATGAGGCATACAATGAGAA+TGG | + | chr3_1:73892757-73892776 | Msa0374420:CDS | 40.0% | |
| CTGTGTTCACTTACAAGATC+AGG | - | chr3_1:73892823-73892842 | None:intergenic | 40.0% | |
| TCCTTGTTCAACTGTTGTTC+AGG | + | chr3_1:73892900-73892919 | Msa0374420:intron | 40.0% | |
| ACCTGAACAACAGTTGAACA+AGG | - | chr3_1:73892904-73892923 | None:intergenic | 40.0% | |
| CATGCCCATCTGAAGAATAT+GGG | - | chr3_1:73892951-73892970 | None:intergenic | 40.0% | |
| TCATGCCCATCTGAAGAATA+TGG | - | chr3_1:73892952-73892971 | None:intergenic | 40.0% | |
| TATTCTTCAGATGGGCATGA+CGG | + | chr3_1:73892952-73892971 | Msa0374420:CDS | 40.0% | |
| ! | TAATGCTAGAAGTATGCTGC+TGG | - | chr3_1:73893159-73893178 | None:intergenic | 40.0% |
| CAACACAAGTTCATACAGGA+AGG | - | chr3_1:73893286-73893305 | None:intergenic | 40.0% | |
| CTTCCTGTATGAACTTGTGT+TGG | + | chr3_1:73893284-73893303 | Msa0374420:intron | 40.0% | |
| ! | ACTTGTGTTGGTAAAAGCCT+AGG | + | chr3_1:73893296-73893315 | Msa0374420:intron | 40.0% |
| TACTCACCTTCTATGTTCCA+AGG | + | chr3_1:73893556-73893575 | Msa0374420:intron | 40.0% | |
| GGATCTAGACTTACTATCGA+TGG | + | chr3_1:73893988-73894007 | Msa0374420:intron | 40.0% | |
| ! | TAGGTTGTAGCATTGGGTAT+CGG | + | chr3_1:73894021-73894040 | Msa0374420:intron | 40.0% |
| CATTTCCATTATGCACAAGC+TGG | + | chr3_1:73894091-73894110 | Msa0374420:intron | 40.0% | |
| AGAAACCAGCTTGTGCATAA+TGG | - | chr3_1:73894099-73894118 | None:intergenic | 40.0% | |
| !! | ATTGTCCCTGATTTGCTCAT+TGG | + | chr3_1:73894235-73894254 | Msa0374420:intron | 40.0% |
| GTTCTCCAATGAGCAAATCA+GGG | - | chr3_1:73894243-73894262 | None:intergenic | 40.0% | |
| ACCTGTTGGCAACCAATAAA+CGG | - | chr3_1:73894373-73894392 | None:intergenic | 40.0% | |
| ! | AGGTACGCGAGTTCATTTTA+TGG | + | chr3_1:73894389-73894408 | Msa0374420:intron | 40.0% |
| AGTCCAATGCTTCCCTAAAT+GGG | - | chr3_1:73894415-73894434 | None:intergenic | 40.0% | |
| TGGCACTCAGTTCAATTTCA+AGG | - | chr3_1:73894476-73894495 | None:intergenic | 40.0% | |
| CAAAAGCTATCAGATGAACC+CGG | + | chr3_1:73894557-73894576 | Msa0374420:intron | 40.0% | |
| ! | AGAGGCTTTGACTGAAATGA+GGG | + | chr3_1:73894590-73894609 | Msa0374420:CDS | 40.0% |
| ATGAGGGAAGATGAATCAGA+AGG | + | chr3_1:73894606-73894625 | Msa0374420:CDS | 40.0% | |
| GGAGCTGATATTCTATTGGT+TGG | + | chr3_1:73894627-73894646 | Msa0374420:intron | 40.0% | |
| ATATCCAAATAAGGAAGCCC+AGG | - | chr3_1:73894749-73894768 | None:intergenic | 40.0% | |
| CTCATGTGAATCTTCCAGTT+TGG | + | chr3_1:73895024-73895043 | Msa0374420:intron | 40.0% | |
| AGCAGTTCATATTCCCAAAC+TGG | - | chr3_1:73895041-73895060 | None:intergenic | 40.0% | |
| CTGGAACATCATTTAGACAG+TGG | + | chr3_1:73895291-73895310 | Msa0374420:intron | 40.0% | |
| TGGTGAGTACTCGATGATTA+AGG | + | chr3_1:73895551-73895570 | Msa0374420:CDS | 40.0% | |
| ! | AGGACAATTTTCTTCCCAGA+AGG | + | chr3_1:73895730-73895749 | Msa0374420:three_prime_UTR | 40.0% |
| GAAGAGAAAAGGAACGTTGC+TGG | + | chr3_1:73890880-73890899 | Msa0374420:five_prime_UTR | 45.0% | |
| ! | GACTTTTACGTTCCACCAAG+CGG | + | chr3_1:73890947-73890966 | Msa0374420:five_prime_UTR | 45.0% |
| !! | TGACCGACTTGCAGAATAGT+TGG | + | chr3_1:73890989-73891008 | Msa0374420:five_prime_UTR | 45.0% |
| TAAGGTGAACAAGTACGCAC+GGG | - | chr3_1:73891069-73891088 | None:intergenic | 45.0% | |
| GCTGATCTTCTATTACGACG+AGG | - | chr3_1:73891620-73891639 | None:intergenic | 45.0% | |
| CAGAAAAAGCCGAGAGCAAA+CGG | - | chr3_1:73891855-73891874 | None:intergenic | 45.0% | |
| ! | TTGAACCCTTTTTGCAGGTG+AGG | + | chr3_1:73891966-73891985 | Msa0374420:intron | 45.0% |
| ACCGATCTGGTCTAAGAGTT+TGG | + | chr3_1:73892320-73892339 | Msa0374420:intron | 45.0% | |
| TTGTATGCCTCATCTCCTGT+GGG | - | chr3_1:73892751-73892770 | None:intergenic | 45.0% | |
| ATTGTATGCCTCATCTCCTG+TGG | - | chr3_1:73892752-73892771 | None:intergenic | 45.0% | |
| GACGGCATTGTTAGAGAAGA+TGG | + | chr3_1:73892970-73892989 | Msa0374420:CDS | 45.0% | |
| TTCTTGAAGGAAGTGGCAAG+TGG | + | chr3_1:73893338-73893357 | Msa0374420:intron | 45.0% | |
| TTGTAAACAAGCTGTAGCCC+AGG | + | chr3_1:73893455-73893474 | Msa0374420:CDS | 45.0% | |
| ! | ATTTTATGAAAGGCCCGTGC+TGG | + | chr3_1:73893640-73893659 | Msa0374420:intron | 45.0% |
| !! | GATATGATGGATGGTCGTGT+TGG | + | chr3_1:73893685-73893704 | Msa0374420:CDS | 45.0% |
| !!! | CTGTTTTTGCCTGCATGCAT+TGG | + | chr3_1:73893816-73893835 | Msa0374420:intron | 45.0% |
| GCAGCTACAAGATGCACTAA+AGG | - | chr3_1:73894183-73894202 | None:intergenic | 45.0% | |
| GGTTCTCCAATGAGCAAATC+AGG | - | chr3_1:73894244-73894263 | None:intergenic | 45.0% | |
| AAATGAACTCGCGTACCTGT+TGG | - | chr3_1:73894387-73894406 | None:intergenic | 45.0% | |
| GAGTCCAATGCTTCCCTAAA+TGG | - | chr3_1:73894416-73894435 | None:intergenic | 45.0% | |
| ACGTTGCCATATACTTGGTC+TGG | + | chr3_1:73894529-73894548 | Msa0374420:intron | 45.0% | |
| GTTCAGCCAGACCAAGTATA+TGG | - | chr3_1:73894538-73894557 | None:intergenic | 45.0% | |
| ! | AAAGCCTCTCTGTAGTTTGC+CGG | - | chr3_1:73894579-73894598 | None:intergenic | 45.0% |
| ! | GAGAGGCTTTGACTGAAATG+AGG | + | chr3_1:73894589-73894608 | Msa0374420:CDS | 45.0% |
| AGAACCTGGTATGCTGCAAT+TGG | - | chr3_1:73894803-73894822 | None:intergenic | 45.0% | |
| TTACAGACGGGTAAGGGAAA+AGG | - | chr3_1:73895268-73895287 | None:intergenic | 45.0% | |
| ! | TTTTCCCTTACCCGTCTGTA+AGG | + | chr3_1:73895267-73895286 | Msa0374420:intron | 45.0% |
| ATGTTCCAGACCTTACAGAC+GGG | - | chr3_1:73895280-73895299 | None:intergenic | 45.0% | |
| GATGTTCCAGACCTTACAGA+CGG | - | chr3_1:73895281-73895300 | None:intergenic | 45.0% | |
| TGACCCCCTTTATTCACAAC+AGG | + | chr3_1:73895524-73895543 | Msa0374420:intron | 45.0% | |
| GAGTACTCGATGATTAAGGC+TGG | + | chr3_1:73895555-73895574 | Msa0374420:CDS | 45.0% | |
| TACTCGATGATTAAGGCTGG+TGG | + | chr3_1:73895558-73895577 | Msa0374420:CDS | 45.0% | |
| ACTCGATGATTAAGGCTGGT+GGG | + | chr3_1:73895559-73895578 | Msa0374420:CDS | 45.0% | |
| TGTTAGGATGATGTCAGCAC+CGG | - | chr3_1:73895646-73895665 | None:intergenic | 45.0% | |
| ! | CAAGCTGCGAGATTTTTGTG+TGG | + | chr3_1:73895678-73895697 | Msa0374420:CDS | 45.0% |
| GTCAAATGCATTGAGCTCTC+TGG | - | chr3_1:73895756-73895775 | None:intergenic | 45.0% | |
| GCTCAATGCATTTGACAGTG+TGG | + | chr3_1:73895760-73895779 | Msa0374420:three_prime_UTR | 45.0% | |
| !!! | TAAAAAAAAAACATTTTTAA+AGG | + | chr3_1:73892257-73892276 | Msa0374420:intron | 5.0% |
| !!! | AAAAAAAAAACATTTTTAAA+GGG | + | chr3_1:73892258-73892277 | Msa0374420:intron | 5.0% |
| !!! | TTTAAAATAGATTAAATATT+TGG | - | chr3_1:73894496-73894515 | None:intergenic | 5.0% |
| CGTAATCGGAGATTGAAGCG+TGG | - | chr3_1:73891217-73891236 | None:intergenic | 50.0% | |
| GGCTTCGAAATCTGCATCAC+TGG | - | chr3_1:73891388-73891407 | None:intergenic | 50.0% | |
| CACATTACCAGCGACAACAG+CGG | - | chr3_1:73891409-73891428 | None:intergenic | 50.0% | |
| ! | TGTTGTCGCTGGTAATGTGC+CGG | + | chr3_1:73891410-73891429 | Msa0374420:CDS | 50.0% |
| CTCACAAGTGAAGTCACCAC+TGG | - | chr3_1:73891480-73891499 | None:intergenic | 50.0% | |
| TACACATCGATCCGCGTTTC+AGG | + | chr3_1:73891640-73891659 | Msa0374420:CDS | 50.0% | |
| AGCTTGCATCCGTTTGCTCT+CGG | + | chr3_1:73891843-73891862 | Msa0374420:intron | 50.0% | |
| ! | AACCCTTTTTGCAGGTGAGG+AGG | + | chr3_1:73891969-73891988 | Msa0374420:intron | 50.0% |
| GTCCTCCTCACCTGCAAAAA+GGG | - | chr3_1:73891974-73891993 | None:intergenic | 50.0% | |
| TGTCCTCCTCACCTGCAAAA+AGG | - | chr3_1:73891975-73891994 | None:intergenic | 50.0% | |
| ATCCGGGCATAGCACCAATT+GGG | - | chr3_1:73891999-73892018 | None:intergenic | 50.0% | |
| ! | TACAGGCTTGGTTGGAGACA+CGG | + | chr3_1:73892021-73892040 | Msa0374420:CDS | 50.0% |
| ! | GTTGCAAAAGCACGGGATGT+TGG | + | chr3_1:73892598-73892617 | Msa0374420:CDS | 50.0% |
| ATCTCCTGTGGGGGTCTAAA+GGG | - | chr3_1:73892740-73892759 | None:intergenic | 50.0% | |
| TGTATGCCTCATCTCCTGTG+GGG | - | chr3_1:73892750-73892769 | None:intergenic | 50.0% | |
| GACCATCCATCATATCGCTG+GGG | - | chr3_1:73893681-73893700 | None:intergenic | 50.0% | |
| CGACCATCCATCATATCGCT+GGG | - | chr3_1:73893682-73893701 | None:intergenic | 50.0% | |
| ACGACCATCCATCATATCGC+TGG | - | chr3_1:73893683-73893702 | None:intergenic | 50.0% | |
| ACGCTACGGTTATTGGCGAA+AGG | - | chr3_1:73894153-73894172 | None:intergenic | 50.0% | |
| ! | GCCGTTTATTGGTTGCCAAC+AGG | + | chr3_1:73894369-73894388 | Msa0374420:intron | 50.0% |
| ! | TGGCCCATTTAGGGAAGCAT+TGG | + | chr3_1:73894409-73894428 | Msa0374420:CDS | 50.0% |
| ! | TTGGACTCAAACCCCCGTTT+TGG | + | chr3_1:73894428-73894447 | Msa0374420:CDS | 50.0% |
| ! | AAGCCTCTCTGTAGTTTGCC+GGG | - | chr3_1:73894578-73894597 | None:intergenic | 50.0% |
| GAAGCCTGGGCTTCCTTATT+TGG | + | chr3_1:73894742-73894761 | Msa0374420:CDS | 50.0% | |
| TGGTATGCTGCAATTGGCAG+CGG | - | chr3_1:73894797-73894816 | None:intergenic | 50.0% | |
| CAGCATACCAGGTTCTTCTC+TGG | + | chr3_1:73894807-73894826 | Msa0374420:intron | 50.0% | |
| !! | CTCTGGCCCATTCTAGTTCT+TGG | + | chr3_1:73894824-73894843 | Msa0374420:intron | 50.0% |
| TTTATATCGAGCTGGGGCAC+AGG | + | chr3_1:73894872-73894891 | Msa0374420:intron | 50.0% | |
| CAGACCTTACAGACGGGTAA+GGG | - | chr3_1:73895274-73895293 | None:intergenic | 50.0% | |
| CTCGATGATTAAGGCTGGTG+GGG | + | chr3_1:73895560-73895579 | Msa0374420:CDS | 50.0% | |
| TTACTGTGCCTTAGACGTGC+CGG | + | chr3_1:73895624-73895643 | Msa0374420:CDS | 50.0% | |
| ! | ATTGAGCTCTCTGGCCTTCT+GGG | - | chr3_1:73895747-73895766 | None:intergenic | 50.0% |
| GAACAAGTACGCACGGGACA+TGG | - | chr3_1:73891063-73891082 | None:intergenic | 55.0% | |
| !! | ACCCCAATTGGTGCTATGCC+CGG | + | chr3_1:73891994-73892013 | Msa0374420:CDS | 55.0% |
| TCCGGGCATAGCACCAATTG+GGG | - | chr3_1:73891998-73892017 | None:intergenic | 55.0% | |
| CATCCGGGCATAGCACCAAT+TGG | - | chr3_1:73892000-73892019 | None:intergenic | 55.0% | |
| CAACCAAGCCTGTAGCATCC+GGG | - | chr3_1:73892015-73892034 | None:intergenic | 55.0% | |
| CCAACCAAGCCTGTAGCATC+CGG | - | chr3_1:73892016-73892035 | None:intergenic | 55.0% | |
| ! | GAGACACGGACTGTTGCAAG+AGG | + | chr3_1:73892035-73892054 | Msa0374420:CDS | 55.0% |
| TCTCCTGTGGGGGTCTAAAG+GGG | - | chr3_1:73892739-73892758 | None:intergenic | 55.0% | |
| CATCTCCTGTGGGGGTCTAA+AGG | - | chr3_1:73892741-73892760 | None:intergenic | 55.0% | |
| TTAGACCCCCACAGGAGATG+AGG | + | chr3_1:73892741-73892760 | Msa0374420:intron | 55.0% | |
| GTATGCCTCATCTCCTGTGG+GGG | - | chr3_1:73892749-73892768 | None:intergenic | 55.0% | |
| TGACCACATCTGCTCCAGCA+CGG | - | chr3_1:73893657-73893676 | None:intergenic | 55.0% | |
| ! | AGCCCCAGCGATATGATGGA+TGG | + | chr3_1:73893676-73893695 | Msa0374420:CDS | 55.0% |
| GAACCCGGCAAACTACAGAG+AGG | + | chr3_1:73894572-73894591 | Msa0374420:CDS | 55.0% | |
| TTGCATGTGCAGGTGAAGCC+TGG | + | chr3_1:73894728-73894747 | Msa0374420:intron | 55.0% | |
| TGCATGTGCAGGTGAAGCCT+GGG | + | chr3_1:73894729-73894748 | Msa0374420:intron | 55.0% | |
| GCTGCCAATTGCAGCATACC+AGG | + | chr3_1:73894796-73894815 | Msa0374420:CDS | 55.0% | |
| GAATGGGCCAGAGAAGAACC+TGG | - | chr3_1:73894817-73894836 | None:intergenic | 55.0% | |
| ! | GAGCTGGGGCACAGGTTTTA+TGG | + | chr3_1:73894880-73894899 | Msa0374420:intron | 55.0% |
| CCAGACCTTACAGACGGGTA+AGG | - | chr3_1:73895275-73895294 | None:intergenic | 55.0% | |
| CCTTACCCGTCTGTAAGGTC+TGG | + | chr3_1:73895272-73895291 | Msa0374420:intron | 55.0% | |
| ! | GGGTAGGGTGTCAAGCATCA+TGG | - | chr3_1:73895415-73895434 | None:intergenic | 55.0% |
| ! | CATTGAGCTCTCTGGCCTTC+TGG | - | chr3_1:73895748-73895767 | None:intergenic | 55.0% |
| TTCGAAGCCGCTGTTGTCGC+TGG | + | chr3_1:73891399-73891418 | Msa0374420:CDS | 60.0% | |
| CGACGAGGACGCCTCTGAAT+TGG | - | chr3_1:73891605-73891624 | None:intergenic | 60.0% | |
| GGTGAGGAGGACACCCCAAT+TGG | + | chr3_1:73891982-73892001 | Msa0374420:intron | 60.0% | |
| GTGCTATGCCCGGATGCTAC+AGG | + | chr3_1:73892004-73892023 | Msa0374420:CDS | 60.0% | |
| ATGCCCGGATGCTACAGGCT+TGG | + | chr3_1:73892009-73892028 | Msa0374420:CDS | 60.0% | |
| ! | CCGGATGCTACAGGCTTGGT+TGG | + | chr3_1:73892013-73892032 | Msa0374420:CDS | 60.0% |
| TTCCCCCTTTAGACCCCCAC+AGG | + | chr3_1:73892733-73892752 | Msa0374420:intron | 60.0% | |
| CTCCTGTGGGGGTCTAAAGG+GGG | - | chr3_1:73892738-73892757 | None:intergenic | 60.0% | |
| GACCACATCTGCTCCAGCAC+GGG | - | chr3_1:73893656-73893675 | None:intergenic | 60.0% | |
| GGTCAGCCCCAGCGATATGA+TGG | + | chr3_1:73893672-73893691 | Msa0374420:CDS | 60.0% | |
| CGAGCAGCTCTCGATGCTGA+AGG | + | chr3_1:73893715-73893734 | Msa0374420:CDS | 60.0% | |
| !! | TGTCAGCACCGGCACGTCTA+AGG | - | chr3_1:73895635-73895654 | None:intergenic | 60.0% |
| GCCTCCTGTACCGCCTACAC+CGG | + | chr3_1:73891437-73891456 | Msa0374420:CDS | 65.0% | |
| TGCACCTGCTGGAACGCCAG+TGG | + | chr3_1:73891461-73891480 | Msa0374420:CDS | 65.0% | |
| GTCACCACTGGCGTTCCAGC+AGG | - | chr3_1:73891468-73891487 | None:intergenic | 65.0% | |
| ! | GGCGGTACAGGAGGCGCATC+CGG | - | chr3_1:73891432-73891451 | None:intergenic | 70.0% |
| GCCGGTGTAGGCGGTACAGG+AGG | - | chr3_1:73891441-73891460 | None:intergenic | 70.0% | |
| GCAGCCGGTGTAGGCGGTAC+AGG | - | chr3_1:73891444-73891463 | None:intergenic | 70.0% | |
| GCAGGTGCAGCCGGTGTAGG+CGG | - | chr3_1:73891450-73891469 | None:intergenic | 70.0% | |
| CCAGCAGGTGCAGCCGGTGT+AGG | - | chr3_1:73891453-73891472 | None:intergenic | 70.0% | |
| ! | CCTACACCGGCTGCACCTGC+TGG | + | chr3_1:73891450-73891469 | Msa0374420:CDS | 70.0% |
| GGCGTTCCAGCAGGTGCAGC+CGG | - | chr3_1:73891459-73891478 | None:intergenic | 70.0% | |
| GGCCCGTGCTGGAGCAGATG+TGG | + | chr3_1:73893651-73893670 | Msa0374420:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73890857 | 73896007 | 73890857 | ID=Msa0374420;Name=Msa0374420 |
| chr3_1 | mRNA | 73890857 | 73896007 | 73890857 | ID=Msa0374420-mRNA-1;Parent=Msa0374420;Name=Msa0374420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=383|1|1|1|1|1|12|294|413 |
| chr3_1 | exon | 73890857 | 73891494 | 73890857 | ID=Msa0374420-mRNA-1:exon:16926;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73891602 | 73891713 | 73891602 | ID=Msa0374420-mRNA-1:exon:16927;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73891983 | 73892056 | 73891983 | ID=Msa0374420-mRNA-1:exon:16928;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73892598 | 73892666 | 73892598 | ID=Msa0374420-mRNA-1:exon:16929;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73892745 | 73892828 | 73892745 | ID=Msa0374420-mRNA-1:exon:16930;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73892922 | 73892991 | 73892922 | ID=Msa0374420-mRNA-1:exon:16931;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73893421 | 73893476 | 73893421 | ID=Msa0374420-mRNA-1:exon:16932;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73893652 | 73893773 | 73893652 | ID=Msa0374420-mRNA-1:exon:16933;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73894391 | 73894462 | 73894391 | ID=Msa0374420-mRNA-1:exon:16934;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73894563 | 73894644 | 73894563 | ID=Msa0374420-mRNA-1:exon:16935;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73894740 | 73894817 | 73894740 | ID=Msa0374420-mRNA-1:exon:16936;Parent=Msa0374420-mRNA-1 |
| chr3_1 | exon | 73895546 | 73896007 | 73895546 | ID=Msa0374420-mRNA-1:exon:16937;Parent=Msa0374420-mRNA-1 |
| chr3_1 | five_prime_UTR | 73890857 | 73891239 | 73890857 | ID=Msa0374420-mRNA-1:five_prime_utr;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73891240 | 73891494 | 73891240 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73891602 | 73891713 | 73891602 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73891983 | 73892056 | 73891983 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73892598 | 73892666 | 73892598 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73892745 | 73892828 | 73892745 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73892922 | 73892991 | 73892922 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73893421 | 73893476 | 73893421 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73893652 | 73893773 | 73893652 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73894391 | 73894462 | 73894391 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73894563 | 73894644 | 73894563 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73894740 | 73894817 | 73894740 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | CDS | 73895546 | 73895713 | 73895546 | ID=Msa0374420-mRNA-1:cds;Parent=Msa0374420-mRNA-1 |
| chr3_1 | three_prime_UTR | 73895714 | 73896007 | 73895714 | ID=Msa0374420-mRNA-1:three_prime_utr;Parent=Msa0374420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
