Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790450 | XP_003592901.1 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790450 | sp|Q9FUM1|EF1G_PRUAV | 78.910 | 422 | 82 | 4 | 3 | 418 | 2 | 422 | 0.0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790450 | Q1SL16 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0790450 | 0.855091 | 7.961777e-62 | -8.615850e-47 |
| Msa0021290 | Msa0790450 | 0.831476 | 1.633828e-55 | -8.615850e-47 |
| Msa0021320 | Msa0790450 | 0.836642 | 8.301980e-57 | -8.615850e-47 |
| Msa0029730 | Msa0790450 | 0.808657 | 2.780955e-50 | -8.615850e-47 |
| Msa0037230 | Msa0790450 | 0.807074 | 6.037289e-50 | -8.615850e-47 |
| Msa0040220 | Msa0790450 | 0.863932 | 1.748485e-64 | -8.615850e-47 |
| Msa0042510 | Msa0790450 | 0.826022 | 3.406550e-54 | -8.615850e-47 |
| Msa0050320 | Msa0790450 | -0.809430 | 1.899934e-50 | -8.615850e-47 |
| Msa0071640 | Msa0790450 | 0.873178 | 1.798458e-67 | -8.615850e-47 |
| Msa0071760 | Msa0790450 | 0.821954 | 3.067028e-53 | -8.615850e-47 |
| Msa0072570 | Msa0790450 | 0.810026 | 1.414273e-50 | -8.615850e-47 |
| Msa0079560 | Msa0790450 | 0.831544 | 1.572019e-55 | -8.615850e-47 |
| Msa0086160 | Msa0790450 | 0.857164 | 1.967100e-62 | -8.615850e-47 |
| Msa0087910 | Msa0790450 | 0.843360 | 1.469937e-58 | -8.615850e-47 |
| Msa0089540 | Msa0790450 | 0.856277 | 3.586635e-62 | -8.615850e-47 |
| Msa0094210 | Msa0790450 | 0.803641 | 3.164583e-49 | -8.615850e-47 |
| Msa0099090 | Msa0790450 | -0.816076 | 6.661346e-52 | -8.615850e-47 |
| Msa0114600 | Msa0790450 | 0.842675 | 2.237273e-58 | -8.615850e-47 |
| Msa0116600 | Msa0790450 | 0.849092 | 4.036808e-60 | -8.615850e-47 |
| Msa0116690 | Msa0790450 | 0.852858 | 3.503241e-61 | -8.615850e-47 |
| Msa0602900 | Msa0790450 | 0.893366 | 6.723949e-75 | -8.615850e-47 |
| Msa0604890 | Msa0790450 | -0.805402 | 1.358253e-49 | -8.615850e-47 |
| Msa0605890 | Msa0790450 | 0.849443 | 3.222703e-60 | -8.615850e-47 |
| Msa0609120 | Msa0790450 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
| Msa0619230 | Msa0790450 | 0.880359 | 5.857244e-70 | -8.615850e-47 |
| Msa0621190 | Msa0790450 | 0.840525 | 8.251055e-58 | -8.615850e-47 |
| Msa0622230 | Msa0790450 | 0.815061 | 1.120960e-51 | -8.615850e-47 |
| Msa0623360 | Msa0790450 | -0.809331 | 1.994963e-50 | -8.615850e-47 |
| Msa0629280 | Msa0790450 | 0.810469 | 1.134992e-50 | -8.615850e-47 |
| Msa0643960 | Msa0790450 | 0.894745 | 1.847400e-75 | -8.615850e-47 |
| Msa0646180 | Msa0790450 | -0.807424 | 5.089139e-50 | -8.615850e-47 |
| Msa0648620 | Msa0790450 | 0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0648670 | Msa0790450 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0653060 | Msa0790450 | 0.805119 | 1.556752e-49 | -8.615850e-47 |
| Msa0656450 | Msa0790450 | 0.837567 | 4.818000e-57 | -8.615850e-47 |
| Msa0663400 | Msa0790450 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
| Msa0686550 | Msa0790450 | 0.815364 | 9.603557e-52 | -8.615850e-47 |
| Msa0686660 | Msa0790450 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
| Msa0691760 | Msa0790450 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
| Msa0694400 | Msa0790450 | 0.860185 | 2.463170e-63 | -8.615850e-47 |
| Msa0704860 | Msa0790450 | 0.850461 | 1.673093e-60 | -8.615850e-47 |
| Msa0708630 | Msa0790450 | 0.905764 | 3.041144e-80 | -8.615850e-47 |
| Msa0718560 | Msa0790450 | 0.874608 | 5.910786e-68 | -8.615850e-47 |
| Msa0748350 | Msa0790450 | 0.830083 | 3.585917e-55 | -8.615850e-47 |
| Msa0759660 | Msa0790450 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0784830 | Msa0790450 | 0.803604 | 3.220281e-49 | -8.615850e-47 |
| Msa0790450 | Msa0798590 | 0.824111 | 9.636451e-54 | -8.615850e-47 |
| Msa0790450 | Msa0834220 | 0.823097 | 1.664141e-53 | -8.615850e-47 |
| Msa0790450 | Msa0846900 | 0.801981 | 6.967711e-49 | -8.615850e-47 |
| Msa0790450 | Msa0857260 | 0.825597 | 4.298784e-54 | -8.615850e-47 |
| Msa0790450 | Msa0865790 | 0.826408 | 2.758109e-54 | -8.615850e-47 |
| Msa0790450 | Msa0880050 | 0.862340 | 5.431368e-64 | -8.615850e-47 |
| Msa0790450 | Msa0929680 | 0.816499 | 5.359793e-52 | -8.615850e-47 |
| Msa0790450 | Msa0929700 | 0.884287 | 2.180579e-71 | -8.615850e-47 |
| Msa0790450 | Msa0930100 | 0.885161 | 1.031646e-71 | -8.615850e-47 |
| Msa0790450 | Msa0930360 | 0.866300 | 3.154071e-65 | -8.615850e-47 |
| Msa0790450 | Msa0930790 | 0.852617 | 4.104280e-61 | -8.615850e-47 |
| Msa0790450 | Msa0930890 | 0.851249 | 1.003433e-60 | -8.615850e-47 |
| Msa0790450 | Msa0935930 | -0.807288 | 5.439254e-50 | -8.615850e-47 |
| Msa0790450 | Msa0982940 | 0.813770 | 2.162869e-51 | -8.615850e-47 |
| Msa0790450 | Msa1001620 | 0.800517 | 1.388596e-48 | -8.615850e-47 |
| Msa0790450 | Msa1004780 | 0.841057 | 5.986520e-58 | -8.615850e-47 |
| Msa0790450 | Msa1019090 | 0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0790450 | Msa1019110 | 0.825663 | 4.144972e-54 | -8.615850e-47 |
| Msa0790450 | Msa1025200 | 0.898090 | 7.453540e-77 | -8.615850e-47 |
| Msa0790450 | Msa1025220 | 0.898498 | 5.005051e-77 | -8.615850e-47 |
| Msa0790450 | Msa1026710 | 0.826742 | 2.296212e-54 | -8.615850e-47 |
| Msa0790450 | Msa1029980 | 0.803255 | 3.803558e-49 | -8.615850e-47 |
| Msa0790450 | Msa1040160 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0790450 | Msa1041830 | 0.810740 | 9.917599e-51 | -8.615850e-47 |
| Msa0790450 | Msa1047020 | 0.881595 | 2.107061e-70 | -8.615850e-47 |
| Msa0790450 | Msa1050100 | 0.844750 | 6.231258e-59 | -8.615850e-47 |
| Msa0790450 | Msa1054280 | 0.806161 | 9.410132e-50 | -8.615850e-47 |
| Msa0790450 | Msa1068660 | 0.862214 | 5.937304e-64 | -8.615850e-47 |
| Msa0790450 | Msa1070810 | 0.836792 | 7.602728e-57 | -8.615850e-47 |
| Msa0790450 | Msa1076200 | 0.820226 | 7.669794e-53 | -8.615850e-47 |
| Msa0790450 | Msa1082050 | 0.864741 | 9.778008e-65 | -8.615850e-47 |
| Msa0790450 | Msa1083370 | 0.808220 | 3.446991e-50 | -8.615850e-47 |
| Msa0790450 | Msa1085570 | -0.812166 | 4.861047e-51 | -8.615850e-47 |
| Msa0790450 | Msa1085850 | 0.866039 | 3.814720e-65 | -8.615850e-47 |
| Msa0790450 | Msa1091290 | 0.818506 | 1.891838e-52 | -8.615850e-47 |
| Msa0790450 | Msa1093190 | -0.805027 | 1.627442e-49 | -8.615850e-47 |
| Msa0790450 | Msa1109310 | 0.806730 | 7.137681e-50 | -8.615850e-47 |
| Msa0790450 | Msa1116940 | 0.848886 | 4.606237e-60 | -8.615850e-47 |
| Msa0790450 | Msa1124980 | 0.860112 | 2.591545e-63 | -8.615850e-47 |
| Msa0790450 | Msa1126690 | 0.895469 | 9.306950e-76 | -8.615850e-47 |
| Msa0790450 | Msa1131030 | 0.811905 | 5.540578e-51 | -8.615850e-47 |
| Msa0790450 | Msa1136880 | 0.854855 | 9.319498e-62 | -8.615850e-47 |
| Msa0790450 | Msa1136980 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
| Msa0790450 | Msa1144610 | 0.824689 | 7.046024e-54 | -8.615850e-47 |
| Msa0790450 | Msa1156830 | 0.871948 | 4.628399e-67 | -8.615850e-47 |
| Msa0790450 | Msa1158630 | 0.842214 | 2.964555e-58 | -8.615850e-47 |
| Msa0790450 | Msa1163320 | 0.831167 | 1.945810e-55 | -8.615850e-47 |
| Msa0790450 | Msa1165640 | 0.808414 | 3.133912e-50 | -8.615850e-47 |
| Msa0790450 | Msa1166670 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0790450 | Msa1167360 | 0.862597 | 4.527754e-64 | -8.615850e-47 |
| Msa0790450 | Msa1206240 | 0.814752 | 1.313104e-51 | -8.615850e-47 |
| Msa0790450 | Msa1218610 | 0.827949 | 1.179020e-54 | -8.615850e-47 |
| Msa0790450 | Msa1219760 | 0.839832 | 1.251244e-57 | -8.615850e-47 |
| Msa0790450 | Msa1227080 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0790450 | Msa1235950 | 0.850718 | 1.416790e-60 | -8.615850e-47 |
| Msa0790450 | Msa1235980 | 0.854349 | 1.306136e-61 | -8.615850e-47 |
| Msa0790450 | Msa1237040 | 0.922180 | 1.373739e-88 | -8.615850e-47 |
| Msa0790450 | Msa1245270 | 0.813811 | 2.119105e-51 | -8.615850e-47 |
| Msa0790450 | Msa1255830 | 0.863648 | 2.142567e-64 | -8.615850e-47 |
| Msa0790450 | Msa1255850 | 0.867817 | 1.034398e-65 | -8.615850e-47 |
| Msa0790450 | Msa1258540 | 0.822525 | 2.261198e-53 | -8.615850e-47 |
| Msa0790450 | Msa1263610 | -0.813162 | 2.942621e-51 | -8.615850e-47 |
| Msa0790450 | Msa1278130 | 0.868694 | 5.397030e-66 | -8.615850e-47 |
| Msa0790450 | Msa1284060 | 0.832560 | 8.815884e-56 | -8.615850e-47 |
| Msa0790450 | Msa1284800 | 0.832219 | 1.071043e-55 | -8.615850e-47 |
| Msa0790450 | Msa1296090 | 0.859567 | 3.784139e-63 | -8.615850e-47 |
| Msa0790450 | Msa1316100 | 0.816006 | 6.907348e-52 | -8.615850e-47 |
| Msa0790450 | Msa1317390 | 0.901766 | 1.921654e-78 | -8.615850e-47 |
| Msa0790450 | Msa1333350 | 0.823708 | 1.197895e-53 | -8.615850e-47 |
| Msa0790450 | Msa1333370 | 0.817833 | 2.685566e-52 | -8.615850e-47 |
| Msa0790450 | Msa1341780 | 0.916192 | 2.393487e-85 | -8.615850e-47 |
| Msa0790450 | Msa1347610 | 0.840727 | 7.307036e-58 | -8.615850e-47 |
| Msa0790450 | Msa1351020 | 0.865800 | 4.540651e-65 | -8.615850e-47 |
| Msa0790450 | Msa1351910 | 0.824952 | 6.107520e-54 | -8.615850e-47 |
| Msa0790450 | Msa1359880 | -0.803368 | 3.604846e-49 | -8.615850e-47 |
| Msa0790450 | Msa1363910 | 0.832544 | 8.898682e-56 | -8.615850e-47 |
| Msa0790450 | Msa1364110 | 0.800858 | 1.182970e-48 | -8.615850e-47 |
| Msa0790450 | Msa1367540 | 0.870301 | 1.618094e-66 | -8.615850e-47 |
| Msa0790450 | Msa1371410 | 0.841403 | 4.853996e-58 | -8.615850e-47 |
| Msa0790450 | Msa1385480 | 0.859429 | 4.160485e-63 | -8.615850e-47 |
| Msa0790450 | Msa1387750 | 0.846913 | 1.610895e-59 | -8.615850e-47 |
| Msa0790450 | Msa1390760 | 0.884340 | 2.084373e-71 | -8.615850e-47 |
| Msa0790450 | Msa1403520 | 0.941532 | 3.528867e-101 | -8.615850e-47 |
| Msa0790450 | Msa1407550 | 0.847606 | 1.039943e-59 | -8.615850e-47 |
| Msa0790450 | Msa1413570 | 0.840553 | 8.114433e-58 | -8.615850e-47 |
| Msa0790450 | Msa1415620 | 0.845739 | 3.365022e-59 | -8.615850e-47 |
| Msa0790450 | Msa1423050 | 0.858923 | 5.901019e-63 | -8.615850e-47 |
| Msa0790450 | Msa1424570 | 0.877933 | 4.220091e-69 | -8.615850e-47 |
| Msa0790450 | Msa1425070 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
| Msa0790450 | Msa1432310 | 0.845055 | 5.154083e-59 | -8.615850e-47 |
| Msa0790450 | Msa1446410 | 0.821898 | 3.161129e-53 | -8.615850e-47 |
| Msa0790450 | Msa1446510 | 0.838700 | 2.460791e-57 | -8.615850e-47 |
| Msa0790450 | Msa1449160 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
| Msa0790450 | Msa1450560 | 0.999270 | 1.026378e-299 | -8.615850e-47 |
| Msa0790450 | Msa1463570 | 0.809342 | 1.983926e-50 | -8.615850e-47 |
| Msa0790450 | Msa1465700 | 0.855369 | 6.607514e-62 | -8.615850e-47 |
| Msa0790450 | Msa1465890 | 0.810206 | 1.293372e-50 | -8.615850e-47 |
| Msa0123290 | Msa0790450 | 0.800391 | 1.473198e-48 | -8.615850e-47 |
| Msa0127230 | Msa0790450 | 0.824054 | 9.936215e-54 | -8.615850e-47 |
| Msa0128330 | Msa0790450 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0132460 | Msa0790450 | 0.904922 | 7.389362e-80 | -8.615850e-47 |
| Msa0134580 | Msa0790450 | 0.872320 | 3.481730e-67 | -8.615850e-47 |
| Msa0154720 | Msa0790450 | -0.808574 | 2.896635e-50 | -8.615850e-47 |
| Msa0167860 | Msa0790450 | 0.851800 | 7.010175e-61 | -8.615850e-47 |
| Msa0169710 | Msa0790450 | 0.826820 | 2.199703e-54 | -8.615850e-47 |
| Msa0173250 | Msa0790450 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0174580 | Msa0790450 | 0.808692 | 2.733124e-50 | -8.615850e-47 |
| Msa0182050 | Msa0790450 | 0.902663 | 7.701289e-79 | -8.615850e-47 |
| Msa0182100 | Msa0790450 | 0.894678 | 1.967418e-75 | -8.615850e-47 |
| Msa0183840 | Msa0790450 | 0.844120 | 9.205925e-59 | -8.615850e-47 |
| Msa0188740 | Msa0790450 | 0.979587 | 2.693701e-148 | -8.615850e-47 |
| Msa0191550 | Msa0790450 | 0.828045 | 1.118105e-54 | -8.615850e-47 |
| Msa0192050 | Msa0790450 | 0.856026 | 4.247247e-62 | -8.615850e-47 |
| Msa0192300 | Msa0790450 | 0.878379 | 2.944875e-69 | -8.615850e-47 |
| Msa0194940 | Msa0790450 | 0.841720 | 4.003587e-58 | -8.615850e-47 |
| Msa0195030 | Msa0790450 | 0.864955 | 8.377974e-65 | -8.615850e-47 |
| Msa0219090 | Msa0790450 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
| Msa0234850 | Msa0790450 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0234900 | Msa0790450 | 0.833483 | 5.195656e-56 | -8.615850e-47 |
| Msa0237180 | Msa0790450 | 0.875470 | 3.004719e-68 | -8.615850e-47 |
| Msa0370350 | Msa0790450 | -0.819726 | 9.980921e-53 | -8.615850e-47 |
| Msa0371490 | Msa0790450 | 0.897222 | 1.733146e-76 | -8.615850e-47 |
| Msa0372100 | Msa0790450 | 0.814682 | 1.360327e-51 | -8.615850e-47 |
| Msa0373830 | Msa0790450 | 0.846184 | 2.547600e-59 | -8.615850e-47 |
| Msa0377370 | Msa0790450 | 0.848422 | 6.192547e-60 | -8.615850e-47 |
| Msa0377520 | Msa0790450 | 0.844014 | 9.827507e-59 | -8.615850e-47 |
| Msa0378620 | Msa0790450 | -0.823481 | 1.353538e-53 | -8.615850e-47 |
| Msa0380590 | Msa0790450 | 0.857154 | 1.980618e-62 | -8.615850e-47 |
| Msa0382670 | Msa0790450 | 0.835976 | 1.226260e-56 | -8.615850e-47 |
| Msa0385030 | Msa0790450 | 0.842559 | 2.401231e-58 | -8.615850e-47 |
| Msa0387290 | Msa0790450 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0388250 | Msa0790450 | 0.838920 | 2.158117e-57 | -8.615850e-47 |
| Msa0388520 | Msa0790450 | 0.852622 | 4.090719e-61 | -8.615850e-47 |
| Msa0416210 | Msa0790450 | 0.803092 | 4.110644e-49 | -8.615850e-47 |
| Msa0416470 | Msa0790450 | 0.832749 | 7.913887e-56 | -8.615850e-47 |
| Msa0417850 | Msa0790450 | -0.815165 | 1.063306e-51 | -8.615850e-47 |
| Msa0419710 | Msa0790450 | 0.817161 | 3.806802e-52 | -8.615850e-47 |
| Msa0426090 | Msa0790450 | 0.896077 | 5.211937e-76 | -8.615850e-47 |
| Msa0426250 | Msa0790450 | 0.903014 | 5.369074e-79 | -8.615850e-47 |
| Msa0426940 | Msa0790450 | 0.831585 | 1.535391e-55 | -8.615850e-47 |
| Msa0430130 | Msa0790450 | 0.837238 | 5.848798e-57 | -8.615850e-47 |
| Msa0432260 | Msa0790450 | -0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0432750 | Msa0790450 | 0.842078 | 3.220739e-58 | -8.615850e-47 |
| Msa0433060 | Msa0790450 | 0.839737 | 1.325141e-57 | -8.615850e-47 |
| Msa0435280 | Msa0790450 | 0.805481 | 1.307648e-49 | -8.615850e-47 |
| Msa0450150 | Msa0790450 | 0.853156 | 2.878346e-61 | -8.615850e-47 |
| Msa0472480 | Msa0790450 | 0.889461 | 2.372285e-73 | -8.615850e-47 |
| Msa0475810 | Msa0790450 | 0.844149 | 9.042617e-59 | -8.615850e-47 |
| Msa0476730 | Msa0790450 | -0.816564 | 5.182477e-52 | -8.615850e-47 |
| Msa0479480 | Msa0790450 | 0.825423 | 4.725508e-54 | -8.615850e-47 |
| Msa0479980 | Msa0790450 | 0.839671 | 1.378171e-57 | -8.615850e-47 |
| Msa0482560 | Msa0790450 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0239420 | Msa0790450 | 0.830977 | 2.166704e-55 | -8.615850e-47 |
| Msa0270160 | Msa0790450 | 0.976315 | 1.367374e-141 | -8.615850e-47 |
| Msa0274940 | Msa0790450 | 0.854887 | 9.125517e-62 | -8.615850e-47 |
| Msa0277600 | Msa0790450 | 0.859268 | 4.650903e-63 | -8.615850e-47 |
| Msa0281330 | Msa0790450 | 0.855227 | 7.268775e-62 | -8.615850e-47 |
| Msa0281370 | Msa0790450 | 0.860038 | 2.728920e-63 | -8.615850e-47 |
| Msa0301250 | Msa0790450 | 0.874027 | 9.308766e-68 | -8.615850e-47 |
| Msa0313060 | Msa0790450 | 0.896133 | 4.942908e-76 | -8.615850e-47 |
| Msa0315430 | Msa0790450 | 0.852922 | 3.358804e-61 | -8.615850e-47 |
| Msa0315660 | Msa0790450 | 0.874081 | 8.924317e-68 | -8.615850e-47 |
| Msa0340560 | Msa0790450 | 0.814665 | 1.372433e-51 | -8.615850e-47 |
| Msa0500420 | Msa0790450 | 0.854577 | 1.122154e-61 | -8.615850e-47 |
| Msa0511760 | Msa0790450 | 0.838747 | 2.393484e-57 | -8.615850e-47 |
| Msa0517480 | Msa0790450 | 0.806497 | 7.993347e-50 | -8.615850e-47 |
| Msa0521730 | Msa0790450 | 0.885639 | 6.837637e-72 | -8.615850e-47 |
| Msa0524680 | Msa0790450 | 0.837253 | 5.796949e-57 | -8.615850e-47 |
| Msa0547920 | Msa0790450 | 0.892858 | 1.076911e-74 | -8.615850e-47 |
| Msa0549550 | Msa0790450 | -0.807386 | 5.184249e-50 | -8.615850e-47 |
| Msa0550490 | Msa0790450 | 0.821593 | 3.718283e-53 | -8.615850e-47 |
| Msa0573550 | Msa0790450 | 0.890761 | 7.354054e-74 | -8.615850e-47 |
| Msa0574780 | Msa0790450 | 0.842364 | 2.705563e-58 | -8.615850e-47 |
| Msa0575960 | Msa0790450 | -0.807182 | 5.726761e-50 | -8.615850e-47 |
| Msa0578010 | Msa0790450 | 0.844325 | 8.108569e-59 | -8.615850e-47 |
| Msa0582070 | Msa0790450 | 0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa0585570 | Msa0790450 | 0.807749 | 4.341839e-50 | -8.615850e-47 |
| Msa0597240 | Msa0790450 | 0.840923 | 6.489653e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790450 | MtrunA17_Chr2g0276951 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Msa0790450 | MtrunA17_Chr3g0102331 | 89.021 | 419 | 42 | 3 | 3 | 418 | 2 | 419 | 0.0 | 769 |
| Msa0790450 | MtrunA17_Chr0c12g0493651 | 83.055 | 419 | 67 | 3 | 3 | 418 | 2 | 419 | 0.0 | 678 |
| Msa0790450 | MtrunA17_Chr4g0077001 | 56.522 | 322 | 52 | 3 | 13 | 333 | 12 | 246 | 1.23e-114 | 335 |
| Msa0790450 | MtrunA17_Chr4g0077011 | 90.769 | 65 | 6 | 0 | 344 | 408 | 1 | 65 | 1.11e-38 | 135 |
| Msa0790450 | MtrunA17_Chr3g0109891 | 30.233 | 172 | 107 | 6 | 42 | 203 | 40 | 208 | 1.19e-13 | 69.7 |
| Msa0790450 | MtrunA17_Chr1g0157211 | 28.221 | 163 | 107 | 4 | 16 | 169 | 16 | 177 | 5.34e-12 | 65.1 |
| Msa0790450 | MtrunA17_Chr1g0195831 | 27.014 | 211 | 125 | 5 | 13 | 205 | 11 | 210 | 6.44e-12 | 64.7 |
| Msa0790450 | MtrunA17_Chr3g0095781 | 25.714 | 175 | 113 | 4 | 42 | 204 | 39 | 208 | 8.23e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790450 | AT1G09640.1 | 76.555 | 418 | 91 | 4 | 3 | 418 | 2 | 414 | 0.0 | 641 |
| Msa0790450 | AT1G57720.1 | 74.341 | 417 | 101 | 5 | 3 | 418 | 2 | 413 | 0.0 | 627 |
| Msa0790450 | AT1G57720.2 | 74.341 | 417 | 101 | 5 | 3 | 418 | 2 | 413 | 0.0 | 627 |
| Msa0790450 | AT1G09640.2 | 69.608 | 204 | 60 | 2 | 3 | 205 | 2 | 204 | 7.31e-97 | 291 |
| Msa0790450 | AT1G09640.2 | 88.732 | 71 | 7 | 1 | 349 | 418 | 195 | 265 | 1.02e-35 | 132 |
| Msa0790450 | AT2G30870.1 | 30.075 | 133 | 84 | 3 | 38 | 162 | 35 | 166 | 7.82e-13 | 67.8 |
| Msa0790450 | AT2G30860.1 | 29.371 | 143 | 94 | 2 | 27 | 162 | 24 | 166 | 1.71e-12 | 67.0 |
| Msa0790450 | AT3G62760.1 | 28.141 | 199 | 128 | 6 | 16 | 203 | 14 | 208 | 2.44e-12 | 66.6 |
| Msa0790450 | AT5G17220.1 | 28.655 | 171 | 113 | 3 | 42 | 204 | 40 | 209 | 1.30e-11 | 64.3 |
Find 134 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAATATCTTGCGGAAAT+TGG | 0.099297 | 5_3:+1234000 | None:intergenic |
| CTTTGGTTCATCTTTGGTTT+TGG | 0.104573 | 5_3:+1233910 | None:intergenic |
| CATTCATCCATGATAAATTT+TGG | 0.113279 | 5_3:+1233290 | None:intergenic |
| GTGTTTGATTTGCAGGATTC+TGG | 0.117283 | 5_3:-1233526 | Msa0790450:intron |
| CACTTTCTTTGGTTCATCTT+TGG | 0.187717 | 5_3:+1233904 | None:intergenic |
| TCCTCCAAGTAAGATGATTT+TGG | 0.192577 | 5_3:-1233798 | Msa0790450:CDS |
| TGGATCAGAGCCTCCATTTA+AGG | 0.199866 | 5_3:-1233348 | Msa0790450:CDS |
| TTTGGAAAGATGCTTATAAT+TGG | 0.211636 | 5_3:-1233368 | Msa0790450:CDS |
| TCTGATTTAGCCACTTTCTT+TGG | 0.237195 | 5_3:+1233893 | None:intergenic |
| AGGATTCTTGGGTTTGGGCT+TGG | 0.251916 | 5_3:+1233832 | None:intergenic |
| ACAACATCCAACTTGTATAT+TGG | 0.252389 | 5_3:-1234103 | Msa0790450:CDS |
| CTCCTCTTCAACTTCTACTT+TGG | 0.254637 | 5_3:+1233859 | None:intergenic |
| GGATTCTTGGGTTTGGGCTT+GGG | 0.262060 | 5_3:+1233833 | None:intergenic |
| CCCAATTTCCGCAAGATATT+AGG | 0.262248 | 5_3:-1234001 | Msa0790450:CDS |
| CACAACCCCTTCACCTTAAA+TGG | 0.280661 | 5_3:+1233335 | None:intergenic |
| CTGGCTCGCAAGTATGCTTT+TGG | 0.282861 | 5_3:-1233386 | Msa0790450:CDS |
| ATTTGAGGGAGAGGCTCTTT+TGG | 0.299039 | 5_3:-1233174 | Msa0790450:CDS |
| CAAATTCTATATTTCTCTTT+CGG | 0.305227 | 5_3:-1232966 | Msa0790450:three_prime_UTR |
| TTTATCAACATGAACCCTAT+TGG | 0.305444 | 5_3:-1235561 | Msa0790450:CDS |
| TCCTCTTCAACTTCTACTTT+GGG | 0.315309 | 5_3:+1233860 | None:intergenic |
| TTTCTTTCAGGTCCCGGTCT+TGG | 0.315787 | 5_3:-1235458 | Msa0790450:intron |
| TCAAGAGGATTCTTGGGTTT+GGG | 0.320569 | 5_3:+1233827 | None:intergenic |
| GTCAAGAGGATTCTTGGGTT+TGG | 0.321823 | 5_3:+1233826 | None:intergenic |
| ACAATACCTACCTTTCCAAT+AGG | 0.324030 | 5_3:+1235546 | None:intergenic |
| AAGAAGGTCAAGAGGATTCT+TGG | 0.332287 | 5_3:+1233820 | None:intergenic |
| TTGGGTCACAACAATTTGTT+TGG | 0.342164 | 5_3:-1235284 | Msa0790450:CDS |
| GTTGGAAGCCATGGCGGCCT+TGG | 0.343555 | 5_3:-1235796 | Msa0790450:intron |
| TCATCACTATAGCAGAAAAT+AGG | 0.351177 | 5_3:+1233073 | None:intergenic |
| CTATATTTCTCTTTCGGCTT+AGG | 0.355049 | 5_3:-1232960 | Msa0790450:three_prime_UTR |
| TTGTGACCCTGAACAAGGTT+GGG | 0.356898 | 5_3:-1233430 | Msa0790450:CDS |
| CAGGTACAACTTCATGATAT+TGG | 0.358542 | 5_3:+1234759 | None:intergenic |
| CAATACCTACCTTTCCAATA+GGG | 0.369972 | 5_3:+1235547 | None:intergenic |
| TTTAAGTGAAAACTAGTTCC+AGG | 0.372383 | 5_3:-1233140 | Msa0790450:exon |
| CCTAATATCTTGCGGAAATT+GGG | 0.374931 | 5_3:+1234001 | None:intergenic |
| TGGATCATCTCTTATTGATC+AGG | 0.386602 | 5_3:-1235264 | Msa0790450:intron |
| CTTTCCTGCAGTTGCCCGAT+TGG | 0.389371 | 5_3:-1235303 | Msa0790450:intron |
| CTCATGTTGAGAGATACTTT+TGG | 0.389806 | 5_3:-1234039 | Msa0790450:CDS |
| CATTTAAGGTGAAGGGGTTG+TGG | 0.403530 | 5_3:-1233334 | Msa0790450:CDS |
| GCTGAAATTTAAATGCTTTG+TGG | 0.407613 | 5_3:-1233022 | Msa0790450:three_prime_UTR |
| TGTTTGATTTGCAGGATTCT+GGG | 0.410419 | 5_3:-1233525 | Msa0790450:intron |
| GAAACACCCATCTGAAAATC+AGG | 0.417209 | 5_3:+1235600 | None:intergenic |
| TTTCCTGCAGTTGCCCGATT+GGG | 0.425435 | 5_3:-1235302 | Msa0790450:intron |
| AGAAGGTCAAGAGGATTCTT+GGG | 0.433602 | 5_3:+1233821 | None:intergenic |
| AGAGATTCCAAAATTTATCA+TGG | 0.435888 | 5_3:-1233297 | Msa0790450:CDS |
| TATTGGTTTCGCTAAACTCT+TGG | 0.436845 | 5_3:-1234086 | Msa0790450:CDS |
| TTTGTGACCCTGAACAAGGT+TGG | 0.442505 | 5_3:-1233431 | Msa0790450:CDS |
| ATCCAGAGGGATACTCTCTC+TGG | 0.443260 | 5_3:-1233493 | Msa0790450:CDS |
| CAAATTGTTGTGACCCAATC+GGG | 0.445051 | 5_3:+1235289 | None:intergenic |
| GGGTTCATGTTGATAAATTG+AGG | 0.453213 | 5_3:+1235567 | None:intergenic |
| AAATATAGAATTTGTAACTC+TGG | 0.457667 | 5_3:+1232975 | None:intergenic |
| GACCTCACGGAAGTTCCTCT+TGG | 0.467302 | 5_3:+1233748 | None:intergenic |
| AAAAGAGCCTCTCCCTCAAA+TGG | 0.468428 | 5_3:+1233176 | None:intergenic |
| ATTTCTGCAGAGGATGGATC+TGG | 0.469227 | 5_3:-1233405 | Msa0790450:CDS |
| TAGCCTCAGTCTGCTTAACC+TGG | 0.481958 | 5_3:+1233978 | None:intergenic |
| TCATCCAAAATCATCTTACT+TGG | 0.482283 | 5_3:+1233794 | None:intergenic |
| CTCTCAAAGACAGGACCATC+AGG | 0.483996 | 5_3:+1235430 | None:intergenic |
| ACAAATTGTTGTGACCCAAT+CGG | 0.484795 | 5_3:+1235288 | None:intergenic |
| AAGTAAGGACTAAACTTAGA+AGG | 0.485815 | 5_3:+1232845 | None:intergenic |
| TGCTGAACCATTTGAGGGAG+AGG | 0.491080 | 5_3:-1233183 | Msa0790450:CDS |
| TCCAAAATCATCTTACTTGG+AGG | 0.494526 | 5_3:+1233797 | None:intergenic |
| TGTGACCCTGAACAAGGTTG+GGG | 0.494527 | 5_3:-1233429 | Msa0790450:CDS |
| GAGCTGCGCGTTGGAAGCCA+TGG | 0.497491 | 5_3:-1235805 | Msa0790450:exon |
| GAAGATGCTGAACCATTTGA+GGG | 0.499250 | 5_3:-1233188 | Msa0790450:CDS |
| ATCTGCTAAGCAGCAGCCTA+AGG | 0.499718 | 5_3:-1233942 | Msa0790450:CDS |
| TGAAGATGCTGAACCATTTG+AGG | 0.504616 | 5_3:-1233189 | Msa0790450:CDS |
| TTTCCGCAAGATATTAGGCC+AGG | 0.506830 | 5_3:-1233996 | Msa0790450:CDS |
| TTATGACAAAACCACACTCC+TGG | 0.507431 | 5_3:+1233122 | None:intergenic |
| GAGCCTCCATTTAAGGTGAA+GGG | 0.508653 | 5_3:-1233341 | Msa0790450:CDS |
| GGTTCATGTTGATAAATTGA+GGG | 0.510474 | 5_3:+1235568 | None:intergenic |
| TGCTGCTTAGCAGATGGAAT+AGG | 0.510683 | 5_3:+1233950 | None:intergenic |
| ATATCTTGCGGAAATTGGGC+TGG | 0.518090 | 5_3:+1234005 | None:intergenic |
| TCATCTTACTTGGAGGAAGA+AGG | 0.519375 | 5_3:+1233804 | None:intergenic |
| TTCCGTGAGGTCGCAATCAA+AGG | 0.519400 | 5_3:-1233737 | Msa0790450:intron |
| CTCACAATACCTACTTGGTC+GGG | 0.524651 | 5_3:-1234153 | Msa0790450:CDS |
| AGCGAAACCAATATACAAGT+TGG | 0.525950 | 5_3:+1234096 | None:intergenic |
| CAAAGATGAACCAAAGAAAG+TGG | 0.527852 | 5_3:-1233903 | Msa0790450:CDS |
| CGGCATATCCAAGTCTTGGC+AGG | 0.531508 | 5_3:+1234740 | None:intergenic |
| TTCGCTCAAGAGAGCACTTG+AGG | 0.540956 | 5_3:-1234194 | Msa0790450:CDS |
| AACCAGAGAGAGTATCCCTC+TGG | 0.541067 | 5_3:+1233491 | None:intergenic |
| GCTCACAATACCTACTTGGT+CGG | 0.543458 | 5_3:-1234154 | Msa0790450:CDS |
| TAGGCGGCATATCCAAGTCT+TGG | 0.546133 | 5_3:+1234736 | None:intergenic |
| CCATCAGGAGTTTCCAAGAC+CGG | 0.547363 | 5_3:+1235445 | None:intergenic |
| TACCTTTGATTGCGACCTCA+CGG | 0.549156 | 5_3:+1233735 | None:intergenic |
| AGTAATGCCATTGCTCGCTA+TGG | 0.549245 | 5_3:-1235409 | Msa0790450:intron |
| ACAACTTACTGGAGGAAAGT+AGG | 0.550453 | 5_3:+1234717 | None:intergenic |
| TTAGGCTGCTGCTTAGCAGA+TGG | 0.550675 | 5_3:+1233944 | None:intergenic |
| AACGAGAGAGAGCTGCGCGT+TGG | 0.552923 | 5_3:-1235814 | Msa0790450:five_prime_UTR |
| GCCCAAAGTAGAAGTTGAAG+AGG | 0.556725 | 5_3:-1233861 | Msa0790450:CDS |
| AGCATCTTCAATCATCTGAC+TGG | 0.558457 | 5_3:+1233202 | None:intergenic |
| CTGATTGCTGCTGAATATGT+TGG | 0.559330 | 5_3:-1235642 | Msa0790450:CDS |
| AAGTTGTACCTGCCAAGACT+TGG | 0.560946 | 5_3:-1234748 | Msa0790450:CDS |
| AGAGCCTCCATTTAAGGTGA+AGG | 0.562476 | 5_3:-1233342 | Msa0790450:CDS |
| TCTTGCTCACAATACCTACT+TGG | 0.565718 | 5_3:-1234158 | Msa0790450:CDS |
| AATCAATCCACTGGTCAATG+TGG | 0.571450 | 5_3:+1234803 | None:intergenic |
| CATCAGGAGTTTCCAAGACC+GGG | 0.574741 | 5_3:+1235446 | None:intergenic |
| GAAAACTAGTTCCAGGAGTG+TGG | 0.576342 | 5_3:-1233133 | Msa0790450:three_prime_UTR |
| CAAAGTAGAAGTTGAAGAGG+AGG | 0.579683 | 5_3:-1233858 | Msa0790450:CDS |
| TATACTAACCAAGGCCGCCA+TGG | 0.580060 | 5_3:+1235788 | None:intergenic |
| AGATCTGATCGGAAAGCGAA+AGG | 0.582415 | 5_3:+1235839 | None:intergenic |
| GACTCTACTCTAACACCAAG+AGG | 0.583602 | 5_3:-1233763 | Msa0790450:CDS |
| ATCAATCCACTGGTCAATGT+GGG | 0.585165 | 5_3:+1234804 | None:intergenic |
| CTTGGAGGAAGAAGGTCAAG+AGG | 0.586796 | 5_3:+1233812 | None:intergenic |
| CAGCATACCATAGCGAGCAA+TGG | 0.587213 | 5_3:+1235402 | None:intergenic |
| TTCATCAGAGATGTCAACCT+TGG | 0.587509 | 5_3:+1233241 | None:intergenic |
| TTCCGTTGTTGGGAGCGTGA+AGG | 0.588156 | 5_3:+1235685 | None:intergenic |
| CCGGTCTTGGAAACTCCTGA+TGG | 0.589673 | 5_3:-1235445 | Msa0790450:CDS |
| GTTCATGTTGATAAATTGAG+GGG | 0.590470 | 5_3:+1235569 | None:intergenic |
| ATGGCATTACTCTCAAAGAC+AGG | 0.591005 | 5_3:+1235421 | None:intergenic |
| AGCCTCCATTTAAGGTGAAG+GGG | 0.592740 | 5_3:-1233340 | Msa0790450:CDS |
| CAACATGAACCCTATTGGAA+AGG | 0.595932 | 5_3:-1235556 | Msa0790450:intron |
| CTGCGCGTTGGAAGCCATGG+CGG | 0.597364 | 5_3:-1235802 | Msa0790450:exon |
| CTGGGACATGTATGATCCAG+AGG | 0.600612 | 5_3:-1233507 | Msa0790450:CDS |
| ATCCTTCACGCTCCCAACAA+CGG | 0.601253 | 5_3:-1235687 | Msa0790450:CDS |
| TTCAGGCCCACATTGACCAG+TGG | 0.607287 | 5_3:-1234810 | Msa0790450:intron |
| TTGTTTGATTCTCTGAACGA+GGG | 0.612831 | 5_3:-1232924 | Msa0790450:three_prime_UTR |
| TGCTTAGCAGATGGAATAGG+TGG | 0.613551 | 5_3:+1233953 | None:intergenic |
| CAAAAGTATCTCTCAACATG+AGG | 0.614280 | 5_3:+1234040 | None:intergenic |
| ATGTTGTTATAATGTCAGCA+AGG | 0.622569 | 5_3:+1234119 | None:intergenic |
| TTTGTTTGATTCTCTGAACG+AGG | 0.622904 | 5_3:-1232925 | Msa0790450:three_prime_UTR |
| TAACCTGGCCTAATATCTTG+CGG | 0.626332 | 5_3:+1233993 | None:intergenic |
| TGTTGTTATAATGTCAGCAA+GGG | 0.629008 | 5_3:+1234120 | None:intergenic |
| CATGGATGAATGCTATGACA+TGG | 0.631015 | 5_3:-1233279 | Msa0790450:CDS |
| GAAATTGGGCTGGTTGACCA+AGG | 0.645258 | 5_3:+1234015 | None:intergenic |
| GTGACCCTGAACAAGGTTGG+GGG | 0.650105 | 5_3:-1233428 | Msa0790450:CDS |
| TCTCTCGTTTGAGATCTGAT+CGG | 0.653348 | 5_3:+1235828 | None:intergenic |
| AACCCCTTCACCTTAAATGG+AGG | 0.653598 | 5_3:+1233338 | None:intergenic |
| ATGACATGGAGCTCTATGAG+TGG | 0.662196 | 5_3:-1233265 | Msa0790450:CDS |
| TGGGACATGTATGATCCAGA+GGG | 0.668464 | 5_3:-1233506 | Msa0790450:CDS |
| AACAGAATGCCCGACCAAGT+AGG | 0.668821 | 5_3:+1234144 | None:intergenic |
| CTCAACATGAGGAAACTCTG+AGG | 0.714280 | 5_3:+1234051 | None:intergenic |
| AGGCCAGGTTAAGCAGACTG+AGG | 0.721460 | 5_3:-1233981 | Msa0790450:CDS |
| GGAGCTCTATGAGTGGACCA+AGG | 0.731462 | 5_3:-1233258 | Msa0790450:CDS |
| ACTTACTGGAGGAAAGTAGG+CGG | 0.737958 | 5_3:+1234720 | None:intergenic |
| CACCAAGAGGAACTTCCGTG+AGG | 0.751991 | 5_3:-1233750 | Msa0790450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATAGATTTAATCT+TGG | + | chr5_3:1233752-1233771 | None:intergenic | 10.0% |
| !!! | AAGATTAAATCTATTTTAAT+TGG | - | chr5_3:1233751-1233770 | Msa0790450:CDS | 10.0% |
| !! | AAAAAAAAAAAAAAACAACA+TGG | + | chr5_3:1234001-1234020 | None:intergenic | 10.0% |
| !! | AAAACTATAAAAATTAAGTA+AGG | + | chr5_3:1235862-1235881 | None:intergenic | 10.0% |
| !! | ACCATATAATAATAAAACAA+AGG | - | chr5_3:1233462-1233481 | Msa0790450:CDS | 15.0% |
| !!! | TATCCTTTTTGATATTTATT+GGG | - | chr5_3:1233706-1233725 | Msa0790450:intron | 15.0% |
| !! | CAATTATATAATATTTGAGT+TGG | - | chr5_3:1234080-1234099 | Msa0790450:CDS | 15.0% |
| !!! | GCCTTTGTTTTATTATTATA+TGG | + | chr5_3:1233466-1233485 | None:intergenic | 20.0% |
| !!! | GTATCCTTTTTGATATTTAT+TGG | - | chr5_3:1233705-1233724 | Msa0790450:intron | 20.0% |
| !! | TTTCCCAATAAATATCAAAA+AGG | + | chr5_3:1233712-1233731 | None:intergenic | 20.0% |
| !! | TATATATAAACCACATACAA+GGG | + | chr5_3:1233786-1233805 | None:intergenic | 20.0% |
| !!! | TATTTGAATTTTGTTGTTTC+AGG | - | chr5_3:1233862-1233881 | Msa0790450:CDS | 20.0% |
| !! | AAAACATTTGTGAATAATTG+AGG | + | chr5_3:1234106-1234125 | None:intergenic | 20.0% |
| !!! | TTTTCTGAAATCAATTAGTT+TGG | - | chr5_3:1234122-1234141 | Msa0790450:CDS | 20.0% |
| !! | TAGACACAAATTTCAAAAAA+GGG | + | chr5_3:1234226-1234245 | None:intergenic | 20.0% |
| !! | TTAGACACAAATTTCAAAAA+AGG | + | chr5_3:1234227-1234246 | None:intergenic | 20.0% |
| !! | TGAAAAAAAAAAGAAACTAC+AGG | + | chr5_3:1234993-1235012 | None:intergenic | 20.0% |
| !!! | AATATACTATTCTCTGTTTT+TGG | - | chr5_3:1235060-1235079 | Msa0790450:intron | 20.0% |
| !! | AAATATAGAATTTGTAACTC+TGG | + | chr5_3:1235717-1235736 | None:intergenic | 20.0% |
| !! | CAAATTCTATATTTCTCTTT+CGG | - | chr5_3:1235723-1235742 | Msa0790450:intron | 20.0% |
| !! | TGTGTTTATCATAGAAAAAA+GGG | - | chr5_3:1235788-1235807 | Msa0790450:intron | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | - | chr5_3:1235804-1235823 | Msa0790450:exon | 20.0% |
| ! | TAATAATCAACAACAAGTAG+TGG | + | chr5_3:1232966-1232985 | None:intergenic | 25.0% |
| !! | ATCTAAACTAGAATCTTTTC+TGG | + | chr5_3:1233591-1233610 | None:intergenic | 25.0% |
| ! | CTATATATAAACCACATACA+AGG | + | chr5_3:1233787-1233806 | None:intergenic | 25.0% |
| ! | TGTATGTGGTTTATATATAG+AGG | - | chr5_3:1233787-1233806 | Msa0790450:CDS | 25.0% |
| ! | GTATGTGGTTTATATATAGA+GGG | - | chr5_3:1233788-1233807 | Msa0790450:CDS | 25.0% |
| ! | TATAATTGCTATCAATACTC+AGG | + | chr5_3:1234068-1234087 | None:intergenic | 25.0% |
| ! | TGAAATTTGTGTCTAAATGA+AGG | - | chr5_3:1234231-1234250 | Msa0790450:intron | 25.0% |
| !! | TTGCTGAATATTTTCAAAAG+GGG | + | chr5_3:1234301-1234320 | None:intergenic | 25.0% |
| !! | CTTGCTGAATATTTTCAAAA+GGG | + | chr5_3:1234302-1234321 | None:intergenic | 25.0% |
| !!! | ACTTGCTGAATATTTTCAAA+AGG | + | chr5_3:1234303-1234322 | None:intergenic | 25.0% |
| ! | AGGGAAAATATTCAGTAAAA+GGG | + | chr5_3:1234430-1234449 | None:intergenic | 25.0% |
| ! | AAGGGAAAATATTCAGTAAA+AGG | + | chr5_3:1234431-1234450 | None:intergenic | 25.0% |
| ! | TCAGACACAAATTTCAAAAA+GGG | + | chr5_3:1234449-1234468 | None:intergenic | 25.0% |
| ! | TTCAGACACAAATTTCAAAA+AGG | + | chr5_3:1234450-1234469 | None:intergenic | 25.0% |
| ! | TGAAATTTGTGTCTGAATAA+AGG | - | chr5_3:1234453-1234472 | Msa0790450:intron | 25.0% |
| ! | AGAGAATAGTATATTTCCAA+AGG | + | chr5_3:1235055-1235074 | None:intergenic | 25.0% |
| ! | TTTGGAAAGATGCTTATAAT+TGG | - | chr5_3:1235321-1235340 | Msa0790450:intron | 25.0% |
| ! | AGAGATTCCAAAATTTATCA+TGG | - | chr5_3:1235392-1235411 | Msa0790450:intron | 25.0% |
| !! | CATTCATCCATGATAAATTT+TGG | + | chr5_3:1235402-1235421 | None:intergenic | 25.0% |
| ! | GTGTGTTTATCATAGAAAAA+AGG | - | chr5_3:1235787-1235806 | Msa0790450:intron | 25.0% |
| !! | ACATTTTTGTTTCCGTTGTT+GGG | + | chr5_3:1233017-1233036 | None:intergenic | 30.0% |
| !! | AACATTTTTGTTTCCGTTGT+TGG | + | chr5_3:1233018-1233037 | None:intergenic | 30.0% |
| ! | GTTCATGTTGATAAATTGAG+GGG | + | chr5_3:1233123-1233142 | None:intergenic | 30.0% |
| ! | GGTTCATGTTGATAAATTGA+GGG | + | chr5_3:1233124-1233143 | None:intergenic | 30.0% |
| TTTATCAACATGAACCCTAT+TGG | - | chr5_3:1233128-1233147 | Msa0790450:three_prime_UTR | 30.0% | |
| ATTCCTTCTTTCTTTCTTTC+AGG | - | chr5_3:1233219-1233238 | Msa0790450:CDS | 30.0% | |
| AATCAGAGAAAAAGTAAGTG+TGG | + | chr5_3:1233626-1233645 | None:intergenic | 30.0% | |
| ATAGATTTAATCTTGGCAGT+TGG | + | chr5_3:1233745-1233764 | None:intergenic | 30.0% | |
| TATAGAGGGTAAATTTGCAA+AGG | - | chr5_3:1233802-1233821 | Msa0790450:CDS | 30.0% | |
| ! | TGCTGAATATTTTCAAAAGG+GGG | + | chr5_3:1234300-1234319 | None:intergenic | 30.0% |
| ! | ATCTCTTTTAACATCTCAGT+TGG | - | chr5_3:1234364-1234383 | Msa0790450:intron | 30.0% |
| GGGAAAATATTCAGTAAAAG+GGG | + | chr5_3:1234429-1234448 | None:intergenic | 30.0% | |
| TGTTGTTATAATGTCAGCAA+GGG | + | chr5_3:1234572-1234591 | None:intergenic | 30.0% | |
| ATGTTGTTATAATGTCAGCA+AGG | + | chr5_3:1234573-1234592 | None:intergenic | 30.0% | |
| ACAACATCCAACTTGTATAT+TGG | - | chr5_3:1234586-1234605 | Msa0790450:intron | 30.0% | |
| !!! | TTTGGTTCATCTTTGGTTTT+GGG | + | chr5_3:1234781-1234800 | None:intergenic | 30.0% |
| TCATCCAAAATCATCTTACT+TGG | + | chr5_3:1234898-1234917 | None:intergenic | 30.0% | |
| TGATTGTAGCTTATATCCTT+TGG | - | chr5_3:1235036-1235055 | Msa0790450:intron | 30.0% | |
| !! | TAGTTTTCACTTAAAGCACT+TGG | + | chr5_3:1235544-1235563 | None:intergenic | 30.0% |
| TTTAAGTGAAAACTAGTTCC+AGG | - | chr5_3:1235549-1235568 | Msa0790450:intron | 30.0% | |
| !!! | GTGGTTTTGTCATAACTTTT+TGG | - | chr5_3:1235575-1235594 | Msa0790450:CDS | 30.0% |
| TCATCACTATAGCAGAAAAT+AGG | + | chr5_3:1235619-1235638 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCTATAGTGATGA+AGG | - | chr5_3:1235619-1235638 | Msa0790450:CDS | 30.0% |
| GCTGAAATTTAAATGCTTTG+TGG | - | chr5_3:1235667-1235686 | Msa0790450:CDS | 30.0% | |
| ! | TTGTGGTAGCTTAATTTTGA+TGG | - | chr5_3:1235684-1235703 | Msa0790450:CDS | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | + | chr5_3:1235831-1235850 | None:intergenic | 30.0% |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | + | chr5_3:1235832-1235851 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr5_3:1235847-1235866 | None:intergenic | 30.0% | |
| GTGAGTGAATATACTAACCA+AGG | + | chr5_3:1232913-1232932 | None:intergenic | 35.0% | |
| !! | ATTGACTCCTGATTTTCAGA+TGG | - | chr5_3:1233082-1233101 | Msa0790450:three_prime_UTR | 35.0% |
| ! | TTGACTCCTGATTTTCAGAT+GGG | - | chr5_3:1233083-1233102 | Msa0790450:three_prime_UTR | 35.0% |
| !! | GATAAATTGAGGGGTTTTGT+TGG | + | chr5_3:1233114-1233133 | None:intergenic | 35.0% |
| ! | GGGTTCATGTTGATAAATTG+AGG | + | chr5_3:1233125-1233144 | None:intergenic | 35.0% |
| CAATACCTACCTTTCCAATA+GGG | + | chr5_3:1233145-1233164 | None:intergenic | 35.0% | |
| ACAATACCTACCTTTCCAAT+AGG | + | chr5_3:1233146-1233165 | None:intergenic | 35.0% | |
| ACAAATTGTTGTGACCCAAT+CGG | + | chr5_3:1233404-1233423 | None:intergenic | 35.0% | |
| ! | TTGGGTCACAACAATTTGTT+TGG | - | chr5_3:1233405-1233424 | Msa0790450:CDS | 35.0% |
| TGGATCATCTCTTATTGATC+AGG | - | chr5_3:1233425-1233444 | Msa0790450:CDS | 35.0% | |
| ATAATAAAACAAAGGCCGTG+TGG | - | chr5_3:1233470-1233489 | Msa0790450:CDS | 35.0% | |
| ATTTAATCTTGGCAGTTGGT+TGG | + | chr5_3:1233741-1233760 | None:intergenic | 35.0% | |
| ATAACTTCCATGAGAACACA+GGG | + | chr5_3:1233845-1233864 | None:intergenic | 35.0% | |
| AATAACTTCCATGAGAACAC+AGG | + | chr5_3:1233846-1233865 | None:intergenic | 35.0% | |
| GAGAAGAAAAATCAATCCAC+TGG | + | chr5_3:1233898-1233917 | None:intergenic | 35.0% | |
| !! | GTGGATTGATTTTTCTTCTC+TGG | - | chr5_3:1233898-1233917 | Msa0790450:CDS | 35.0% |
| CAGGTACAACTTCATGATAT+TGG | + | chr5_3:1233933-1233952 | None:intergenic | 35.0% | |
| ! | AGAAGAGATACATGGATTGT+TGG | + | chr5_3:1234151-1234170 | None:intergenic | 35.0% |
| GAGATGTTAGAAGAGATACA+TGG | + | chr5_3:1234159-1234178 | None:intergenic | 35.0% | |
| ATCTCTTCTAACATCTCAGA+TGG | - | chr5_3:1234162-1234181 | Msa0790450:CDS | 35.0% | |
| TTTGTGTCTAAATGAAGGAC+TGG | - | chr5_3:1234236-1234255 | Msa0790450:intron | 35.0% | |
| ! | GCTGAATATTTTCAAAAGGG+GGG | + | chr5_3:1234299-1234318 | None:intergenic | 35.0% |
| TTGTGTCTGAATAAAGGTAG+AGG | - | chr5_3:1234459-1234478 | Msa0790450:intron | 35.0% | |
| AGCGAAACCAATATACAAGT+TGG | + | chr5_3:1234596-1234615 | None:intergenic | 35.0% | |
| !! | TATTGGTTTCGCTAAACTCT+TGG | - | chr5_3:1234603-1234622 | Msa0790450:intron | 35.0% |
| !! | CAAAAGTATCTCTCAACATG+AGG | + | chr5_3:1234652-1234671 | None:intergenic | 35.0% |
| ! | CTCATGTTGAGAGATACTTT+TGG | - | chr5_3:1234650-1234669 | Msa0790450:intron | 35.0% |
| CCTAATATCTTGCGGAAATT+GGG | + | chr5_3:1234691-1234710 | None:intergenic | 35.0% | |
| !! | CTTTGGTTCATCTTTGGTTT+TGG | + | chr5_3:1234782-1234801 | None:intergenic | 35.0% |
| ! | CACTTTCTTTGGTTCATCTT+TGG | + | chr5_3:1234788-1234807 | None:intergenic | 35.0% |
| CAAAGATGAACCAAAGAAAG+TGG | - | chr5_3:1234786-1234805 | Msa0790450:CDS | 35.0% | |
| ! | TCTGATTTAGCCACTTTCTT+TGG | + | chr5_3:1234799-1234818 | None:intergenic | 35.0% |
| ! | AACTTCTACTTTGGGCTTTT+CGG | + | chr5_3:1234824-1234843 | None:intergenic | 35.0% |
| TCCTCTTCAACTTCTACTTT+GGG | + | chr5_3:1234832-1234851 | None:intergenic | 35.0% | |
| ! | TCCTCCAAGTAAGATGATTT+TGG | - | chr5_3:1234891-1234910 | Msa0790450:intron | 35.0% |
| TCCAAAATCATCTTACTTGG+AGG | + | chr5_3:1234895-1234914 | None:intergenic | 35.0% | |
| ! | GTAAGATGATTTTGGATGAC+TGG | - | chr5_3:1234899-1234918 | Msa0790450:intron | 35.0% |
| ! | TTCAAGCTTTTGTAGCTTCT+AGG | - | chr5_3:1235009-1235028 | Msa0790450:intron | 35.0% |
| !! | AATTCCTGTGTTTGATTTGC+AGG | - | chr5_3:1235156-1235175 | Msa0790450:intron | 35.0% |
| !! | TGTTTGATTTGCAGGATTCT+GGG | - | chr5_3:1235164-1235183 | Msa0790450:intron | 35.0% |
| !!! | ATTTTGGAATCTCTTGTCCA+CGG | + | chr5_3:1235386-1235405 | None:intergenic | 35.0% |
| CTATATTTCTCTTTCGGCTT+AGG | - | chr5_3:1235729-1235748 | Msa0790450:intron | 35.0% | |
| TTTGTTTGATTCTCTGAACG+AGG | - | chr5_3:1235764-1235783 | Msa0790450:intron | 35.0% | |
| TTGTTTGATTCTCTGAACGA+GGG | - | chr5_3:1235765-1235784 | Msa0790450:intron | 35.0% | |
| ! | TCTCTCGTTTGAGATCTGAT+CGG | + | chr5_3:1232864-1232883 | None:intergenic | 40.0% |
| CTGATTGCTGCTGAATATGT+TGG | - | chr5_3:1233047-1233066 | Msa0790450:three_prime_UTR | 40.0% | |
| GAAACACCCATCTGAAAATC+AGG | + | chr5_3:1233092-1233111 | None:intergenic | 40.0% | |
| CAACATGAACCCTATTGGAA+AGG | - | chr5_3:1233133-1233152 | Msa0790450:three_prime_UTR | 40.0% | |
| ATGAACCCTATTGGAAAGGT+AGG | - | chr5_3:1233137-1233156 | Msa0790450:exon | 40.0% | |
| GGACCTGAAAGAAAGAAAGA+AGG | + | chr5_3:1233225-1233244 | None:intergenic | 40.0% | |
| ! | TCTTTCTTTCTTTCAGGTCC+CGG | - | chr5_3:1233225-1233244 | Msa0790450:CDS | 40.0% |
| ATGGCATTACTCTCAAAGAC+AGG | + | chr5_3:1233271-1233290 | None:intergenic | 40.0% | |
| CAAATTGTTGTGACCCAATC+GGG | + | chr5_3:1233403-1233422 | None:intergenic | 40.0% | |
| TTGAAAACCAAGAGACCACA+CGG | + | chr5_3:1233488-1233507 | None:intergenic | 40.0% | |
| ! | CACAGGGATATGCAATCTTT+TGG | + | chr5_3:1233829-1233848 | None:intergenic | 40.0% |
| ATCAATCCACTGGTCAATGT+GGG | + | chr5_3:1233888-1233907 | None:intergenic | 40.0% | |
| AATCAATCCACTGGTCAATG+TGG | + | chr5_3:1233889-1233908 | None:intergenic | 40.0% | |
| ACAACTTACTGGAGGAAAGT+AGG | + | chr5_3:1233975-1233994 | None:intergenic | 40.0% | |
| ! | TATTTTCAAAAGGGGGGAGT+TGG | + | chr5_3:1234293-1234312 | None:intergenic | 40.0% |
| TTCAGTAAAAGGGGAAGAGT+TGG | + | chr5_3:1234420-1234439 | None:intergenic | 40.0% | |
| TCTTGCTCACAATACCTACT+TGG | - | chr5_3:1234531-1234550 | Msa0790450:intron | 40.0% | |
| ! | TGAGAGATACTTTTGGACCT+TGG | - | chr5_3:1234657-1234676 | Msa0790450:intron | 40.0% |
| CCCAATTTCCGCAAGATATT+AGG | - | chr5_3:1234688-1234707 | Msa0790450:intron | 40.0% | |
| GCCTAATATCTTGCGGAAAT+TGG | + | chr5_3:1234692-1234711 | None:intergenic | 40.0% | |
| TAACCTGGCCTAATATCTTG+CGG | + | chr5_3:1234699-1234718 | None:intergenic | 40.0% | |
| ! | ACTTCTACTTTGGGCTTTTC+GGG | + | chr5_3:1234823-1234842 | None:intergenic | 40.0% |
| CTCCTCTTCAACTTCTACTT+TGG | + | chr5_3:1234833-1234852 | None:intergenic | 40.0% | |
| CAAAGTAGAAGTTGAAGAGG+AGG | - | chr5_3:1234831-1234850 | Msa0790450:intron | 40.0% | |
| TCAAGAGGATTCTTGGGTTT+GGG | + | chr5_3:1234865-1234884 | None:intergenic | 40.0% | |
| AGAAGGTCAAGAGGATTCTT+GGG | + | chr5_3:1234871-1234890 | None:intergenic | 40.0% | |
| AAGAAGGTCAAGAGGATTCT+TGG | + | chr5_3:1234872-1234891 | None:intergenic | 40.0% | |
| TCATCTTACTTGGAGGAAGA+AGG | + | chr5_3:1234888-1234907 | None:intergenic | 40.0% | |
| GAATCCTGCAAATCAAACAC+AGG | + | chr5_3:1235163-1235182 | None:intergenic | 40.0% | |
| !! | GTGTTTGATTTGCAGGATTC+TGG | - | chr5_3:1235163-1235182 | Msa0790450:intron | 40.0% |
| ! | TTCTTTTGTGACCCTGAACA+AGG | - | chr5_3:1235254-1235273 | Msa0790450:intron | 40.0% |
| CATGGATGAATGCTATGACA+TGG | - | chr5_3:1235410-1235429 | Msa0790450:CDS | 40.0% | |
| TTCATCAGAGATGTCAACCT+TGG | + | chr5_3:1235451-1235470 | None:intergenic | 40.0% | |
| AGCATCTTCAATCATCTGAC+TGG | + | chr5_3:1235490-1235509 | None:intergenic | 40.0% | |
| TGAAGATGCTGAACCATTTG+AGG | - | chr5_3:1235500-1235519 | Msa0790450:intron | 40.0% | |
| GAAGATGCTGAACCATTTGA+GGG | - | chr5_3:1235501-1235520 | Msa0790450:intron | 40.0% | |
| TTATGACAAAACCACACTCC+TGG | + | chr5_3:1235570-1235589 | None:intergenic | 40.0% | |
| AGATCTGATCGGAAAGCGAA+AGG | + | chr5_3:1232853-1232872 | None:intergenic | 45.0% | |
| AGTAATGCCATTGCTCGCTA+TGG | - | chr5_3:1233280-1233299 | Msa0790450:CDS | 45.0% | |
| ! | GTTGAAGCATCCCTTGTATG+TGG | - | chr5_3:1233773-1233792 | Msa0790450:CDS | 45.0% |
| TGCATATCCCTGTGTTCTCA+TGG | - | chr5_3:1233835-1233854 | Msa0790450:CDS | 45.0% | |
| AAGTTGTACCTGCCAAGACT+TGG | - | chr5_3:1233941-1233960 | Msa0790450:CDS | 45.0% | |
| ACTTACTGGAGGAAAGTAGG+CGG | + | chr5_3:1233972-1233991 | None:intergenic | 45.0% | |
| CAACATGGCACACAACTTAC+TGG | + | chr5_3:1233986-1234005 | None:intergenic | 45.0% | |
| GCTCACAATACCTACTTGGT+CGG | - | chr5_3:1234535-1234554 | Msa0790450:intron | 45.0% | |
| CTCACAATACCTACTTGGTC+GGG | - | chr5_3:1234536-1234555 | Msa0790450:intron | 45.0% | |
| CTCAACATGAGGAAACTCTG+AGG | + | chr5_3:1234641-1234660 | None:intergenic | 45.0% | |
| ATATCTTGCGGAAATTGGGC+TGG | + | chr5_3:1234687-1234706 | None:intergenic | 45.0% | |
| TTTCCGCAAGATATTAGGCC+AGG | - | chr5_3:1234693-1234712 | Msa0790450:intron | 45.0% | |
| TGCTTAGCAGATGGAATAGG+TGG | + | chr5_3:1234739-1234758 | None:intergenic | 45.0% | |
| ! | TGCTGCTTAGCAGATGGAAT+AGG | + | chr5_3:1234742-1234761 | None:intergenic | 45.0% |
| !! | GTTTTGGGCTTAGACTCCTT+AGG | + | chr5_3:1234766-1234785 | None:intergenic | 45.0% |
| GCCCAAAGTAGAAGTTGAAG+AGG | - | chr5_3:1234828-1234847 | Msa0790450:intron | 45.0% | |
| GTCAAGAGGATTCTTGGGTT+TGG | + | chr5_3:1234866-1234885 | None:intergenic | 45.0% | |
| GACTCTACTCTAACACCAAG+AGG | - | chr5_3:1234926-1234945 | Msa0790450:intron | 45.0% | |
| TACCTTTGATTGCGACCTCA+CGG | + | chr5_3:1234957-1234976 | None:intergenic | 45.0% | |
| !! | GGTCGCAATCAAAGGTATTG+TGG | - | chr5_3:1234960-1234979 | Msa0790450:intron | 45.0% |
| TGGGACATGTATGATCCAGA+GGG | - | chr5_3:1235183-1235202 | Msa0790450:intron | 45.0% | |
| TTTGTGACCCTGAACAAGGT+TGG | - | chr5_3:1235258-1235277 | Msa0790450:intron | 45.0% | |
| TTGTGACCCTGAACAAGGTT+GGG | - | chr5_3:1235259-1235278 | Msa0790450:intron | 45.0% | |
| AAATCCCCCAACCTTGTTCA+GGG | + | chr5_3:1235268-1235287 | None:intergenic | 45.0% | |
| ATTTCTGCAGAGGATGGATC+TGG | - | chr5_3:1235284-1235303 | Msa0790450:CDS | 45.0% | |
| TGGATCAGAGCCTCCATTTA+AGG | - | chr5_3:1235341-1235360 | Msa0790450:intron | 45.0% | |
| ! | AGAGCCTCCATTTAAGGTGA+AGG | - | chr5_3:1235347-1235366 | Msa0790450:intron | 45.0% |
| ! | GAGCCTCCATTTAAGGTGAA+GGG | - | chr5_3:1235348-1235367 | Msa0790450:intron | 45.0% |
| ! | AGCCTCCATTTAAGGTGAAG+GGG | - | chr5_3:1235349-1235368 | Msa0790450:intron | 45.0% |
| AACCCCTTCACCTTAAATGG+AGG | + | chr5_3:1235354-1235373 | None:intergenic | 45.0% | |
| CACAACCCCTTCACCTTAAA+TGG | + | chr5_3:1235357-1235376 | None:intergenic | 45.0% | |
| ! | CATTTAAGGTGAAGGGGTTG+TGG | - | chr5_3:1235355-1235374 | Msa0790450:intron | 45.0% |
| ATGACATGGAGCTCTATGAG+TGG | - | chr5_3:1235424-1235443 | Msa0790450:CDS | 45.0% | |
| AAAAGAGCCTCTCCCTCAAA+TGG | + | chr5_3:1235516-1235535 | None:intergenic | 45.0% | |
| ! | ATTTGAGGGAGAGGCTCTTT+TGG | - | chr5_3:1235515-1235534 | Msa0790450:intron | 45.0% |
| GAAAACTAGTTCCAGGAGTG+TGG | - | chr5_3:1235556-1235575 | Msa0790450:intron | 45.0% | |
| TATACTAACCAAGGCCGCCA+TGG | + | chr5_3:1232904-1232923 | None:intergenic | 50.0% | |
| ATCCTTCACGCTCCCAACAA+CGG | - | chr5_3:1233002-1233021 | Msa0790450:three_prime_UTR | 50.0% | |
| ! | TTTCTTTCAGGTCCCGGTCT+TGG | - | chr5_3:1233231-1233250 | Msa0790450:CDS | 50.0% |
| CATCAGGAGTTTCCAAGACC+GGG | + | chr5_3:1233246-1233265 | None:intergenic | 50.0% | |
| CCATCAGGAGTTTCCAAGAC+CGG | + | chr5_3:1233247-1233266 | None:intergenic | 50.0% | |
| CTCTCAAAGACAGGACCATC+AGG | + | chr5_3:1233262-1233281 | None:intergenic | 50.0% | |
| CAGCATACCATAGCGAGCAA+TGG | + | chr5_3:1233290-1233309 | None:intergenic | 50.0% | |
| TTTCCTGCAGTTGCCCGATT+GGG | - | chr5_3:1233387-1233406 | Msa0790450:CDS | 50.0% | |
| TAGGCGGCATATCCAAGTCT+TGG | + | chr5_3:1233956-1233975 | None:intergenic | 50.0% | |
| CATGGCACACAACTTACTGG+AGG | + | chr5_3:1233983-1234002 | None:intergenic | 50.0% | |
| !! | TTCGCTCAAGAGAGCACTTG+AGG | - | chr5_3:1234495-1234514 | Msa0790450:intron | 50.0% |
| AACAGAATGCCCGACCAAGT+AGG | + | chr5_3:1234548-1234567 | None:intergenic | 50.0% | |
| !! | GAAATTGGGCTGGTTGACCA+AGG | + | chr5_3:1234677-1234696 | None:intergenic | 50.0% |
| TAGCCTCAGTCTGCTTAACC+TGG | + | chr5_3:1234714-1234733 | None:intergenic | 50.0% | |
| ! | TTAGGCTGCTGCTTAGCAGA+TGG | + | chr5_3:1234748-1234767 | None:intergenic | 50.0% |
| ATCTGCTAAGCAGCAGCCTA+AGG | - | chr5_3:1234747-1234766 | Msa0790450:CDS | 50.0% | |
| GGATTCTTGGGTTTGGGCTT+GGG | + | chr5_3:1234859-1234878 | None:intergenic | 50.0% | |
| AGGATTCTTGGGTTTGGGCT+TGG | + | chr5_3:1234860-1234879 | None:intergenic | 50.0% | |
| CTTGGAGGAAGAAGGTCAAG+AGG | + | chr5_3:1234880-1234899 | None:intergenic | 50.0% | |
| TTCCGTGAGGTCGCAATCAA+AGG | - | chr5_3:1234952-1234971 | Msa0790450:intron | 50.0% | |
| CTGGGACATGTATGATCCAG+AGG | - | chr5_3:1235182-1235201 | Msa0790450:intron | 50.0% | |
| ATCCAGAGGGATACTCTCTC+TGG | - | chr5_3:1235196-1235215 | Msa0790450:intron | 50.0% | |
| !! | AACCAGAGAGAGTATCCCTC+TGG | + | chr5_3:1235201-1235220 | None:intergenic | 50.0% |
| TGTGACCCTGAACAAGGTTG+GGG | - | chr5_3:1235260-1235279 | Msa0790450:intron | 50.0% | |
| GAAATCCCCCAACCTTGTTC+AGG | + | chr5_3:1235269-1235288 | None:intergenic | 50.0% | |
| !! | CTGGCTCGCAAGTATGCTTT+TGG | - | chr5_3:1235303-1235322 | Msa0790450:intron | 50.0% |
| TGCTGAACCATTTGAGGGAG+AGG | - | chr5_3:1235506-1235525 | Msa0790450:intron | 50.0% | |
| ! | TTCCGTTGTTGGGAGCGTGA+AGG | + | chr5_3:1233007-1233026 | None:intergenic | 55.0% |
| CCGGTCTTGGAAACTCCTGA+TGG | - | chr5_3:1233244-1233263 | Msa0790450:CDS | 55.0% | |
| CTTTCCTGCAGTTGCCCGAT+TGG | - | chr5_3:1233386-1233405 | Msa0790450:CDS | 55.0% | |
| ACAAAGGCCGTGTGGTCTCT+TGG | - | chr5_3:1233478-1233497 | Msa0790450:CDS | 55.0% | |
| TTCAGGCCCACATTGACCAG+TGG | - | chr5_3:1233879-1233898 | Msa0790450:CDS | 55.0% | |
| CGGCATATCCAAGTCTTGGC+AGG | + | chr5_3:1233952-1233971 | None:intergenic | 55.0% | |
| AGGCCAGGTTAAGCAGACTG+AGG | - | chr5_3:1234708-1234727 | Msa0790450:intron | 55.0% | |
| CACCAAGAGGAACTTCCGTG+AGG | - | chr5_3:1234939-1234958 | Msa0790450:intron | 55.0% | |
| GACCTCACGGAAGTTCCTCT+TGG | + | chr5_3:1234944-1234963 | None:intergenic | 55.0% | |
| GTGACCCTGAACAAGGTTGG+GGG | - | chr5_3:1235261-1235280 | Msa0790450:intron | 55.0% | |
| AGGTTGGGGGATTTCTGCAG+AGG | - | chr5_3:1235274-1235293 | Msa0790450:CDS | 55.0% | |
| TGGGGGATTTCTGCAGAGGA+TGG | - | chr5_3:1235278-1235297 | Msa0790450:CDS | 55.0% | |
| ! | AAGGGGTTGTGGCTTTTCCG+TGG | - | chr5_3:1235366-1235385 | Msa0790450:intron | 55.0% |
| GGAGCTCTATGAGTGGACCA+AGG | - | chr5_3:1235431-1235450 | Msa0790450:CDS | 55.0% | |
| AACGAGAGAGAGCTGCGCGT+TGG | - | chr5_3:1232875-1232894 | Msa0790450:three_prime_UTR | 60.0% | |
| TGACCCAATCGGGCAACTGC+AGG | + | chr5_3:1233393-1233412 | None:intergenic | 60.0% | |
| GAGCTGCGCGTTGGAAGCCA+TGG | - | chr5_3:1232884-1232903 | Msa0790450:three_prime_UTR | 65.0% | |
| CTGCGCGTTGGAAGCCATGG+CGG | - | chr5_3:1232887-1232906 | Msa0790450:three_prime_UTR | 65.0% | |
| GTTGGAAGCCATGGCGGCCT+TGG | - | chr5_3:1232893-1232912 | Msa0790450:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 1232822 | 1235889 | 1232822 | ID=Msa0790450;Name=Msa0790450 |
| chr5_3 | mRNA | 1232822 | 1235889 | 1232822 | ID=Msa0790450-mRNA-1;Parent=Msa0790450;Name=Msa0790450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=81|1|1|1|1|1|7|332|418 |
| chr5_3 | exon | 1232822 | 1233533 | 1232822 | ID=Msa0790450-mRNA-1:exon:446;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1233738 | 1234236 | 1233738 | ID=Msa0790450-mRNA-1:exon:445;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1234726 | 1234827 | 1234726 | ID=Msa0790450-mRNA-1:exon:444;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1235265 | 1235314 | 1235265 | ID=Msa0790450-mRNA-1:exon:443;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1235410 | 1235470 | 1235410 | ID=Msa0790450-mRNA-1:exon:442;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1235557 | 1235709 | 1235557 | ID=Msa0790450-mRNA-1:exon:441;Parent=Msa0790450-mRNA-1 |
| chr5_3 | exon | 1235797 | 1235889 | 1235797 | ID=Msa0790450-mRNA-1:exon:440;Parent=Msa0790450-mRNA-1 |
| chr5_3 | five_prime_UTR | 1235809 | 1235889 | 1235809 | ID=Msa0790450-mRNA-1:five_prime_utr;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1235797 | 1235808 | 1235797 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1235557 | 1235709 | 1235557 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1235410 | 1235470 | 1235410 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1235265 | 1235314 | 1235265 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1234726 | 1234827 | 1234726 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1233738 | 1234236 | 1233738 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | CDS | 1233154 | 1233533 | 1233154 | ID=Msa0790450-mRNA-1:cds;Parent=Msa0790450-mRNA-1 |
| chr5_3 | three_prime_UTR | 1232822 | 1233153 | 1232822 | ID=Msa0790450-mRNA-1:three_prime_utr;Parent=Msa0790450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
