Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877880 | XP_003618920.2 | 92.318 | 768 | 12 | 2 | 13 | 780 | 1 | 721 | 0.0 | 1459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877880 | sp|Q8GUP1|CTF77_ARATH | 64.411 | 798 | 190 | 11 | 13 | 780 | 1 | 734 | 0.0 | 1029 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877880 | G7KP74 | 92.318 | 768 | 12 | 2 | 13 | 780 | 1 | 721 | 0.0 | 1459 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0631200 | Msa0877880 | 0.802790 | 4.747045e-49 | -8.615850e-47 |
| Msa0669440 | Msa0877880 | 0.810487 | 1.124792e-50 | -8.615850e-47 |
| Msa0692360 | Msa0877880 | 0.803402 | 3.546606e-49 | -8.615850e-47 |
| Msa0215320 | Msa0877880 | -0.809484 | 1.849205e-50 | -8.615850e-47 |
| Msa0226890 | Msa0877880 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0279700 | Msa0877880 | 0.814357 | 1.605609e-51 | -8.615850e-47 |
| Msa0358170 | Msa0877880 | 0.802483 | 5.491189e-49 | -8.615850e-47 |
| Msa0580420 | Msa0877880 | 0.805710 | 1.170285e-49 | -8.615850e-47 |
| Msa0866230 | Msa0877880 | 0.808594 | 2.868396e-50 | -8.615850e-47 |
| Msa0877880 | Msa1051200 | 0.805060 | 1.601743e-49 | -8.615850e-47 |
| Msa0877880 | Msa1075540 | 0.812042 | 5.172237e-51 | -8.615850e-47 |
| Msa0877880 | Msa1082500 | 0.802442 | 5.600070e-49 | -8.615850e-47 |
| Msa0877880 | Msa1194920 | 0.806916 | 6.521350e-50 | -8.615850e-47 |
| Msa0877880 | Msa1199220 | 0.803607 | 3.216288e-49 | -8.615850e-47 |
| Msa0877880 | Msa1322190 | 0.801633 | 8.211716e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877880 | MtrunA17_Chr6g0460371 | 92.318 | 768 | 12 | 2 | 13 | 780 | 1 | 721 | 0.0 | 1459 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877880 | AT1G17760.1 | 64.411 | 798 | 190 | 11 | 13 | 780 | 1 | 734 | 0.0 | 1029 |
Find 170 sgRNAs with CRISPR-Local
Find 602 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTCTGCTCTCAATATC+TGG | 0.138050 | 6_1:-18051287 | Msa0877880:CDS |
| TGCTGCCGGCTCGAGCTTTC+TGG | 0.178155 | 6_1:+18046991 | None:intergenic |
| CACTTCCTCAAGACGCTTTC+CGG | 0.191888 | 6_1:-18047025 | Msa0877880:CDS |
| GCCCTCGCAGAATTATATTT+TGG | 0.208141 | 6_1:+18053058 | None:intergenic |
| TCATATGGAAGTGCTCTTTC+TGG | 0.214071 | 6_1:-18046948 | Msa0877880:CDS |
| GTTAAGTTTGAGCAAACTTA+TGG | 0.243038 | 6_1:-18049569 | Msa0877880:CDS |
| GAAAATATACGAAAACCTTT+TGG | 0.265371 | 6_1:-18050981 | Msa0877880:CDS |
| TTCTGTTCCTCTGCAAATAT+TGG | 0.273437 | 6_1:-18052950 | Msa0877880:CDS |
| CTGTTTGTTGAATTGTCTTC+AGG | 0.282381 | 6_1:-18055408 | Msa0877880:CDS |
| CCTGCTACAAGTGAACTTTC+TGG | 0.302421 | 6_1:-18047656 | Msa0877880:CDS |
| GGAATCCCGTGGAGCAATTC+AGG | 0.310644 | 6_1:-18051545 | Msa0877880:intron |
| AGCTGCTAGGAAGTACTTTC+TGG | 0.311993 | 6_1:-18050606 | Msa0877880:CDS |
| CTTGAGGAAGTGGTTGGCTT+TGG | 0.316640 | 6_1:+18047036 | None:intergenic |
| ATCAACATCTTTGAAGTATC+AGG | 0.324206 | 6_1:+18048664 | None:intergenic |
| TACAAACTGGTACCTCTTGC+CGG | 0.334966 | 6_1:+18049010 | None:intergenic |
| TCCGATGTGTTTCTTCTTGT+GGG | 0.336415 | 6_1:+18053307 | None:intergenic |
| GAGAAGTCTATTCTGCTTAA+TGG | 0.342847 | 6_1:-18048824 | Msa0877880:CDS |
| GCTCTTTCTGGCGATTTATC+CGG | 0.346040 | 6_1:-18046936 | Msa0877880:CDS |
| CACGAAATATTACCAACTTC+TGG | 0.351260 | 6_1:+18053184 | None:intergenic |
| CACATCACATTGAACAACTT+TGG | 0.356399 | 6_1:-18053239 | Msa0877880:CDS |
| GATATAGTTTCATGGATCTA+TGG | 0.361978 | 6_1:-18049065 | Msa0877880:CDS |
| TACATACCTGGATTATGCTT+TGG | 0.368172 | 6_1:+18048634 | None:intergenic |
| TGAGATAAGCCACTTTGAAC+AGG | 0.369484 | 6_1:+18047617 | None:intergenic |
| TTGCTTGTAGAACAGAGATT+TGG | 0.370500 | 6_1:+18057059 | None:intergenic |
| AACTCACTCAAGAATATAAA+CGG | 0.372963 | 6_1:+18050291 | None:intergenic |
| CACATACTGCTTCCAAAACT+TGG | 0.383591 | 6_1:+18055484 | None:intergenic |
| TGCAGAAGCTGCTCGTATAT+TGG | 0.384141 | 6_1:+18055675 | None:intergenic |
| CAAACAGGATCAGTTTCATA+TGG | 0.389990 | 6_1:-18046963 | Msa0877880:CDS |
| AGTAAATATAACTCGTTTGT+TGG | 0.390799 | 6_1:+18052154 | None:intergenic |
| ATGCTTGCTGTGCCACCAAC+TGG | 0.391412 | 6_1:-18052989 | Msa0877880:CDS |
| GAAAGCTACACCACCTGCTT+TGG | 0.398442 | 6_1:-18048191 | Msa0877880:CDS |
| AGCCTTTCTAAAGTCATTGC+CGG | 0.398907 | 6_1:-18053429 | Msa0877880:intron |
| ATGAGAAATTAAGCTTAGTA+AGG | 0.400566 | 6_1:+18046749 | None:intergenic |
| TGTATCACGATATAGTTTCA+TGG | 0.404007 | 6_1:-18049073 | Msa0877880:CDS |
| GTTCTGCCATCTGTTGAGGC+AGG | 0.404429 | 6_1:-18051264 | Msa0877880:CDS |
| CTCTTTCTGGCGATTTATCC+GGG | 0.408313 | 6_1:-18046935 | Msa0877880:CDS |
| TTACATTCGTTTCATTAGAA+AGG | 0.412653 | 6_1:-18054532 | Msa0877880:CDS |
| ATGTAAAATGTTATATCAAC+CGG | 0.416130 | 6_1:+18046908 | None:intergenic |
| CATACCATACATCAGGATAA+TGG | 0.423357 | 6_1:+18051876 | None:intergenic |
| TTAAGTTTGAGCAAACTTAT+GGG | 0.423751 | 6_1:-18049568 | Msa0877880:CDS |
| CTTTCTGGAACTGTCGTATC+CGG | 0.425032 | 6_1:+18047006 | None:intergenic |
| TGCTTCTGCTCTCAATATCT+GGG | 0.426490 | 6_1:-18051286 | Msa0877880:CDS |
| GGAACAGAAACTTGCCTTGT+GGG | 0.433734 | 6_1:+18052964 | None:intergenic |
| GCCGGCAGCACTTCACAAAC+AGG | 0.436930 | 6_1:-18046978 | Msa0877880:CDS |
| TATAAATAACAACTTTCTCT+TGG | 0.437770 | 6_1:-18046727 | Msa0877880:three_prime_UTR |
| TGTACCATTATCCTGATGTA+TGG | 0.438544 | 6_1:-18051880 | Msa0877880:CDS |
| GCAAACCTACCTTCAGTTGA+CGG | 0.442220 | 6_1:-18048157 | Msa0877880:intron |
| ATCCGATGTGTTTCTTCTTG+TGG | 0.442316 | 6_1:+18053306 | None:intergenic |
| TTCACTTGTAGGTTTGGAAA+AGG | 0.443294 | 6_1:-18049595 | Msa0877880:intron |
| TTTCCCGTATTGCTTTCTAC+CGG | 0.444340 | 6_1:+18047586 | None:intergenic |
| AGTAGTTCTTTACGAAGAAC+AGG | 0.444590 | 6_1:-18057099 | Msa0877880:five_prime_UTR |
| ACGGGACAAAGTGGTAAAAC+TGG | 0.444839 | 6_1:-18047710 | Msa0877880:CDS |
| ATTTAGTATCATCTTCCTCT+TGG | 0.448088 | 6_1:+18047063 | None:intergenic |
| CATTGTCACTGTCTCCCAAA+AGG | 0.449879 | 6_1:+18050966 | None:intergenic |
| ACAATAACACTTACAGCTGT+TGG | 0.450659 | 6_1:+18055645 | None:intergenic |
| AGGTCTCTGAAGGCTCTTCC+TGG | 0.450859 | 6_1:-18051794 | Msa0877880:intron |
| TAGAAAGGTTAATGATAAGA+AGG | 0.454228 | 6_1:-18054517 | Msa0877880:CDS |
| GATAGCACAATATCCACATT+TGG | 0.455138 | 6_1:+18047758 | None:intergenic |
| GGGATCTTTGTCAAGACAAA+AGG | 0.458139 | 6_1:+18050526 | None:intergenic |
| ATTGTCTTCAGGTTCCTCTC+TGG | 0.459355 | 6_1:-18055397 | Msa0877880:intron |
| TACAATACTACATCATAGAT+TGG | 0.460256 | 6_1:+18046788 | None:intergenic |
| GAATTTATGCTCAGCTATGT+TGG | 0.465240 | 6_1:-18054459 | Msa0877880:intron |
| TTCGCAGGGACAGGTGCTGC+TGG | 0.466805 | 6_1:-18048238 | Msa0877880:intron |
| TTTGTGTCCAGGCCAAGTTT+TGG | 0.467649 | 6_1:-18055496 | Msa0877880:intron |
| GGATCTTGCTAGCATGCTTA+AGG | 0.473871 | 6_1:-18049546 | Msa0877880:intron |
| GTAGCAGGTGCAGGACCTAC+TGG | 0.474593 | 6_1:+18047671 | None:intergenic |
| GTTATATCAACCGGTGCTCC+CGG | 0.479236 | 6_1:+18046917 | None:intergenic |
| TTCCCGTATTGCTTTCTACC+GGG | 0.479448 | 6_1:+18047587 | None:intergenic |
| CGGAAAGCGTCTTGAGGAAG+TGG | 0.482528 | 6_1:+18047026 | None:intergenic |
| AGTTATATTTACTTATGAGC+AGG | 0.490083 | 6_1:-18052144 | Msa0877880:intron |
| TTCTGCCATCTGTTGAGGCA+GGG | 0.493188 | 6_1:-18051263 | Msa0877880:CDS |
| GTAGAAAGCAATACGGGAAA+AGG | 0.494955 | 6_1:-18047583 | Msa0877880:CDS |
| AGCATCAGGCCCTGTGTGGA+TGG | 0.495690 | 6_1:-18053459 | Msa0877880:CDS |
| AAAATTGGCTAATGAAGCTC+AGG | 0.497731 | 6_1:-18056835 | Msa0877880:intron |
| ATATGTAGGTTGAGCAAAGA+AGG | 0.497802 | 6_1:-18049152 | Msa0877880:intron |
| TCCTGTTTGTGAAGTGCTGC+CGG | 0.502274 | 6_1:+18046977 | None:intergenic |
| GCATAATCATACCATACATC+AGG | 0.502464 | 6_1:+18051869 | None:intergenic |
| ACTCACTCAAGAATATAAAC+GGG | 0.506129 | 6_1:+18050292 | None:intergenic |
| TTACAGAGCGACCTTCCAAC+GGG | 0.507023 | 6_1:-18047728 | Msa0877880:CDS |
| TTAAATTATCTATAAGCTCA+AGG | 0.515562 | 6_1:+18046857 | None:intergenic |
| CAAAGAAGGAAAGAAGCGTT+TGG | 0.515620 | 6_1:-18049138 | Msa0877880:CDS |
| AGTTCACTTGTAGCAGGTGC+AGG | 0.516094 | 6_1:+18047662 | None:intergenic |
| TACCACTTTGTCCCGTTGGA+AGG | 0.517821 | 6_1:+18047717 | None:intergenic |
| TAGACATGATATGTACAAGA+TGG | 0.519730 | 6_1:+18050569 | None:intergenic |
| TCCTCTAGAGGATTCAGTTG+AGG | 0.520038 | 6_1:-18049910 | Msa0877880:intron |
| GGCGATTTATCCGGGAGCAC+CGG | 0.520277 | 6_1:-18046927 | Msa0877880:CDS |
| TATTTCAACTACATCTTCAA+AGG | 0.524522 | 6_1:-18048695 | Msa0877880:CDS |
| GCTACATGGCATGCTAAAGC+TGG | 0.525953 | 6_1:-18051848 | Msa0877880:CDS |
| AGACATGATATGTACAAGAT+GGG | 0.529356 | 6_1:+18050570 | None:intergenic |
| CTGGGTTCTGCCATCTGTTG+AGG | 0.531469 | 6_1:-18051268 | Msa0877880:CDS |
| AGAAAGGTTAATGATAAGAA+GGG | 0.532915 | 6_1:-18054516 | Msa0877880:CDS |
| ACAGGATCAGACATAGCATC+AGG | 0.533541 | 6_1:-18053473 | Msa0877880:intron |
| GCCTTGTGGGATCCAGTTGG+TGG | 0.533793 | 6_1:+18052977 | None:intergenic |
| TTGTCTTGACAAAGATCCCA+AGG | 0.534450 | 6_1:-18050522 | Msa0877880:intron |
| ACAAACTGGTACCTCTTGCC+GGG | 0.540167 | 6_1:+18049011 | None:intergenic |
| AACCGGCAATGACTTTAGAA+AGG | 0.541989 | 6_1:+18053427 | None:intergenic |
| AAGTTCTGTTAGCCAGAAGT+TGG | 0.544913 | 6_1:-18053196 | Msa0877880:intron |
| ATTGAGTTCACTTCCTCTAG+AGG | 0.546234 | 6_1:-18049922 | Msa0877880:CDS |
| CCAGAAAGTTCACTTGTAGC+AGG | 0.556517 | 6_1:+18047656 | None:intergenic |
| TAGGAGTAATAATAGCCCTC+TGG | 0.557030 | 6_1:+18053262 | None:intergenic |
| TATGATCCAAAGCATAATCC+AGG | 0.559022 | 6_1:-18048640 | Msa0877880:intron |
| GCAGTATGTGGAGGCACACA+TGG | 0.560072 | 6_1:-18055471 | Msa0877880:CDS |
| TTAAACCCTGCCTCAACAGA+TGG | 0.560864 | 6_1:+18051258 | None:intergenic |
| AAATATAACTCGTTTGTTGG+AGG | 0.561833 | 6_1:+18052157 | None:intergenic |
| CAACCCGGTAGAAAGCAATA+CGG | 0.562816 | 6_1:-18047590 | Msa0877880:CDS |
| ACAATATCCACATTTGGTGT+TGG | 0.568076 | 6_1:+18047764 | None:intergenic |
| AACCCGGTAGAAAGCAATAC+GGG | 0.568599 | 6_1:-18047589 | Msa0877880:CDS |
| TGCAGGTCCAACACCAAATG+TGG | 0.571426 | 6_1:-18047771 | Msa0877880:intron |
| TCGTTGCCTCTCAAACGTAA+TGG | 0.571895 | 6_1:-18057020 | Msa0877880:intron |
| AAGCGTCTTGAGGAAGTGGT+TGG | 0.574232 | 6_1:+18047030 | None:intergenic |
| TAATACCTGAATTGCTCCAC+GGG | 0.574460 | 6_1:+18051540 | None:intergenic |
| CTGCAATCAAAGTATTTCAA+AGG | 0.574741 | 6_1:-18051814 | Msa0877880:CDS |
| ATGATCTTGATAATTTATCC+CGG | 0.576425 | 6_1:-18049029 | Msa0877880:CDS |
| AAGAAATGCAGTGGATGGCA+TGG | 0.577479 | 6_1:-18052513 | Msa0877880:CDS |
| AGTATTTCAAAGGTCTCTGA+AGG | 0.578380 | 6_1:-18051804 | Msa0877880:CDS |
| ATTATACCATTACGTTTGAG+AGG | 0.578453 | 6_1:+18057014 | None:intergenic |
| AAGGAAAGAAGCGTTTGGTG+AGG | 0.578839 | 6_1:-18049133 | Msa0877880:CDS |
| GAAAGGTTAATGATAAGAAG+GGG | 0.579902 | 6_1:-18054515 | Msa0877880:CDS |
| CTGAAGGTGTTGAAGCTGCT+AGG | 0.582458 | 6_1:-18050619 | Msa0877880:CDS |
| CGTATCCGGAAAGCGTCTTG+AGG | 0.583811 | 6_1:+18047020 | None:intergenic |
| CGAGGGCAGTATACAGAGAA+CGG | 0.583868 | 6_1:-18053042 | Msa0877880:CDS |
| CAGTTCCAGAAAGCTCGAGC+CGG | 0.586394 | 6_1:-18046996 | Msa0877880:CDS |
| CTATGTGGCTTACGCGTCAG+TGG | 0.587294 | 6_1:-18050549 | Msa0877880:CDS |
| TAAGTTTGAGCAAACTTATG+GGG | 0.588290 | 6_1:-18049567 | Msa0877880:CDS |
| GGCTTATCTCACAAGCAACC+CGG | 0.588513 | 6_1:-18047605 | Msa0877880:CDS |
| GGACCTACTGGCAATTGTGA+TGG | 0.590058 | 6_1:+18047683 | None:intergenic |
| TTTACAGAGCGACCTTCCAA+CGG | 0.590971 | 6_1:-18047729 | Msa0877880:CDS |
| TATACGTGCTTTATTCGAGA+GGG | 0.597091 | 6_1:-18049946 | Msa0877880:CDS |
| ACAGGAAGAAATGCAGTGGA+TGG | 0.598108 | 6_1:-18052518 | Msa0877880:intron |
| TGATAATTTATCCCGGCAAG+AGG | 0.598970 | 6_1:-18049022 | Msa0877880:intron |
| ATTATCTATAAGCTCAAGGA+AGG | 0.599782 | 6_1:+18046861 | None:intergenic |
| AATTACCGTCAACTGAAGGT+AGG | 0.599943 | 6_1:+18048152 | None:intergenic |
| GAGATAAGCCACTTTGAACA+GGG | 0.604566 | 6_1:+18047618 | None:intergenic |
| AAGTCTCACCCTGTTCAAAG+TGG | 0.606342 | 6_1:-18047626 | Msa0877880:CDS |
| TTGTACATATCATGTCTATG+TGG | 0.608793 | 6_1:-18050564 | Msa0877880:CDS |
| GTAATACCTGAATTGCTCCA+CGG | 0.609238 | 6_1:+18051539 | None:intergenic |
| TGAAAATTACCGTCAACTGA+AGG | 0.609478 | 6_1:+18048148 | None:intergenic |
| CTTGCCTTGTGGGATCCAGT+TGG | 0.610843 | 6_1:+18052974 | None:intergenic |
| TCAAGATCATTCGAAGTGCA+CGG | 0.617777 | 6_1:+18049042 | None:intergenic |
| ATATACGTGCTTTATTCGAG+AGG | 0.625732 | 6_1:-18049947 | Msa0877880:CDS |
| ATATGCTTATGCAGAGCTAG+AGG | 0.626295 | 6_1:-18051566 | Msa0877880:CDS |
| GCTATGTACTCCATCCACAC+AGG | 0.627247 | 6_1:+18053449 | None:intergenic |
| GACCTTCCAACGGGACAAAG+TGG | 0.627349 | 6_1:-18047719 | Msa0877880:CDS |
| AAGCTGCTCGTATATTGGTG+TGG | 0.629883 | 6_1:+18055680 | None:intergenic |
| ACCAAAATATAATTCTGCGA+GGG | 0.630124 | 6_1:-18053059 | Msa0877880:CDS |
| AGTTGTTCAATGTGATGTGT+AGG | 0.630764 | 6_1:+18053243 | None:intergenic |
| AACCAAAATATAATTCTGCG+AGG | 0.632273 | 6_1:-18053060 | Msa0877880:CDS |
| AAAGGTTAATGATAAGAAGG+GGG | 0.633601 | 6_1:-18054514 | Msa0877880:CDS |
| CTATGTACTCCATCCACACA+GGG | 0.637483 | 6_1:+18053450 | None:intergenic |
| GCCACCAACTGGATCCCACA+AGG | 0.639399 | 6_1:-18052978 | Msa0877880:CDS |
| AACGATACCAATATTTGCAG+AGG | 0.642896 | 6_1:+18052943 | None:intergenic |
| ACATAGCATCAGGCCCTGTG+TGG | 0.645875 | 6_1:-18053463 | Msa0877880:CDS |
| TCTGACAGGAAGAAATGCAG+TGG | 0.647012 | 6_1:-18052522 | Msa0877880:intron |
| ATAATAATGTTCAGGCCAAG+AGG | 0.649307 | 6_1:-18047078 | Msa0877880:intron |
| GACATGATATGTACAAGATG+GGG | 0.653987 | 6_1:+18050571 | None:intergenic |
| TTGTGAGGAAAGTCTACCAG+AGG | 0.655102 | 6_1:-18053278 | Msa0877880:CDS |
| ACCTCAACTGAATCCTCTAG+AGG | 0.658815 | 6_1:+18049909 | None:intergenic |
| ATTCCATCACAATTGCCAGT+AGG | 0.663778 | 6_1:-18047686 | Msa0877880:CDS |
| GTAGTTGAAATACTTGCAGT+CGG | 0.664432 | 6_1:+18048706 | None:intergenic |
| AGGAACAGAAACTTGCCTTG+TGG | 0.668862 | 6_1:+18052963 | None:intergenic |
| GAAGCAATGTCTATTCTCTG+TGG | 0.670370 | 6_1:+18052179 | None:intergenic |
| TATGGTATGATTATGCTACA+TGG | 0.677015 | 6_1:-18051862 | Msa0877880:CDS |
| TGTGGCTTCTGCAATAGACA+AGG | 0.679624 | 6_1:+18055698 | None:intergenic |
| CACATCGGATGACTGTTGTG+AGG | 0.682292 | 6_1:-18053293 | Msa0877880:CDS |
| TGGTACTGAAAAGAAAACAA+TGG | 0.692247 | 6_1:-18056886 | Msa0877880:CDS |
| TGTGAGGAAAGTCTACCAGA+GGG | 0.698856 | 6_1:-18053277 | Msa0877880:CDS |
| GCAGAGCTAGAGGAATCCCG+TGG | 0.700291 | 6_1:-18051556 | Msa0877880:CDS |
| AAGAGAACAACGTACCAGAG+AGG | 0.701521 | 6_1:+18055383 | None:intergenic |
| GAAGACAATTCAACAAACAG+CGG | 0.704193 | 6_1:+18055411 | None:intergenic |
| ACCCACAAGAAGAAACACAT+CGG | 0.717171 | 6_1:-18053308 | Msa0877880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTATATTATTTA+TGG | - | chr6_1:18051874-18051893 | Msa0877880:CDS | 0.0% |
| !!! | TTTTTTTCTTCATATAATTA+TGG | - | chr6_1:18049164-18049183 | Msa0877880:intron | 10.0% |
| !!! | TTTTTATATGTTATTTGATT+GGG | - | chr6_1:18050143-18050162 | Msa0877880:intron | 10.0% |
| !! | TATAAGATTAAGATATTATA+TGG | - | chr6_1:18054573-18054592 | Msa0877880:intron | 10.0% |
| !!! | TTTGAAATTTGAATATTTTT+TGG | - | chr6_1:18055219-18055238 | Msa0877880:intron | 10.0% |
| !!! | AAAAACAAAAATTTAGGATT+AGG | - | chr6_1:18046676-18046695 | Msa0877880:three_prime_UTR | 15.0% |
| !! | TATTAATAATTCATGTTTGT+TGG | - | chr6_1:18047090-18047109 | Msa0877880:intron | 15.0% |
| !! | CAATCAAATAACATATAAAA+AGG | + | chr6_1:18050144-18050163 | None:intergenic | 15.0% |
| !!! | CTTTTTATATGTTATTTGAT+TGG | - | chr6_1:18050142-18050161 | Msa0877880:intron | 15.0% |
| !!! | TTTTATATGTTATTTGATTG+GGG | - | chr6_1:18050144-18050163 | Msa0877880:intron | 15.0% |
| !!! | ATTATATTTTGGTTGATATT+CGG | + | chr6_1:18050754-18050773 | None:intergenic | 15.0% |
| !!! | AAATTATATTTTACAACAGT+TGG | + | chr6_1:18051111-18051130 | None:intergenic | 15.0% |
| !!! | ATTTTAATTAGAAGAATAAC+CGG | - | chr6_1:18051127-18051146 | Msa0877880:intron | 15.0% |
| !! | ACTATAGTCATTTATATTAT+TGG | - | chr6_1:18052326-18052345 | Msa0877880:intron | 15.0% |
| !! | CTATAGTCATTTATATTATT+GGG | - | chr6_1:18052327-18052346 | Msa0877880:intron | 15.0% |
| !! | CAAGTAAAACATTTAAATTT+CGG | + | chr6_1:18052992-18053011 | None:intergenic | 15.0% |
| !!! | TAACAATAATTCTTTTTCAA+TGG | - | chr6_1:18053771-18053790 | Msa0877880:intron | 15.0% |
| !! | ACTGAATCTAAATAAAATAT+TGG | + | chr6_1:18054092-18054111 | None:intergenic | 15.0% |
| !!! | ATATTTTATTTAGATTCAGT+AGG | - | chr6_1:18054092-18054111 | Msa0877880:intron | 15.0% |
| !!! | TCTTTAAAAAATATACAAAC+TGG | + | chr6_1:18054826-18054845 | None:intergenic | 15.0% |
| !! | TTTATTAATCTGAACATAAA+AGG | + | chr6_1:18055312-18055331 | None:intergenic | 15.0% |
| !! | GATTCATATTTAATACATAT+TGG | + | chr6_1:18055812-18055831 | None:intergenic | 15.0% |
| !!! | TATTTGTTATAATAATGTTC+AGG | - | chr6_1:18056734-18056753 | Msa0877880:intron | 15.0% |
| !! | TTCCTGAAAAACAAAAATTT+AGG | - | chr6_1:18046670-18046689 | Msa0877880:three_prime_UTR | 20.0% |
| !!! | ATCCTAAATTTTTGTTTTTC+AGG | + | chr6_1:18046675-18046694 | None:intergenic | 20.0% |
| !! | AAACCAAAAAATCAAAACTT+TGG | + | chr6_1:18047025-18047044 | None:intergenic | 20.0% |
| !!! | TAAATTATTTTCGTATAAGC+TGG | - | chr6_1:18047289-18047308 | Msa0877880:intron | 20.0% |
| !! | TAACAACAGTTGTATATATA+GGG | + | chr6_1:18047458-18047477 | None:intergenic | 20.0% |
| !! | TTAACAACAGTTGTATATAT+AGG | + | chr6_1:18047459-18047478 | None:intergenic | 20.0% |
| !!! | AAGTTTTAACTTTTTGTAGA+GGG | - | chr6_1:18047573-18047592 | Msa0877880:CDS | 20.0% |
| !! | ACAACACTAATATATAATAC+AGG | + | chr6_1:18047604-18047623 | None:intergenic | 20.0% |
| !! | TATAAAATGTTCTCAAATTG+CGG | - | chr6_1:18047797-18047816 | Msa0877880:intron | 20.0% |
| !! | AATGAGCAATATAAACAAAA+GGG | + | chr6_1:18047951-18047970 | None:intergenic | 20.0% |
| !!! | GATTTTTTATGATGCTTATT+TGG | - | chr6_1:18048300-18048319 | Msa0877880:intron | 20.0% |
| !! | TTGTTCTCTTAATCTTATTA+TGG | - | chr6_1:18048450-18048469 | Msa0877880:intron | 20.0% |
| !! | TTGGTATATTAAAGTTAAGT+TGG | - | chr6_1:18048964-18048983 | Msa0877880:intron | 20.0% |
| !! | ATCTTCTAATGATAACATTT+GGG | + | chr6_1:18048995-18049014 | None:intergenic | 20.0% |
| !!! | TTGAAAGATATTTGGTTTTT+CGG | - | chr6_1:18049016-18049035 | Msa0877880:intron | 20.0% |
| !! | AAATAAAACATTATGTAGAC+AGG | + | chr6_1:18049130-18049149 | None:intergenic | 20.0% |
| !!! | TGTCTACATAATGTTTTATT+TGG | - | chr6_1:18049129-18049148 | Msa0877880:CDS | 20.0% |
| !! | AAAATTCTCCTAACAAAAAA+CGG | + | chr6_1:18050091-18050110 | None:intergenic | 20.0% |
| !!! | GTATCACTTTTCAAAATTTT+GGG | - | chr6_1:18050466-18050485 | Msa0877880:intron | 20.0% |
| !!! | TTTCTGTTAACAAATTGTTT+TGG | - | chr6_1:18050908-18050927 | Msa0877880:intron | 20.0% |
| !!! | TGTTTGAATTTTGCTTATAT+TGG | + | chr6_1:18050982-18051001 | None:intergenic | 20.0% |
| !! | TTAATATAGTTGCTCATAAT+AGG | + | chr6_1:18051200-18051219 | None:intergenic | 20.0% |
| !! | GAAAAATTGATACTGTTTAA+AGG | + | chr6_1:18051733-18051752 | None:intergenic | 20.0% |
| !! | AAATAAAGGTAAAAAATGTG+AGG | + | chr6_1:18052189-18052208 | None:intergenic | 20.0% |
| !! | ATTTCATTTGTGAATAGATT+CGG | - | chr6_1:18052221-18052240 | Msa0877880:intron | 20.0% |
| !!! | GGATTTTTTAATGTATTATC+AGG | - | chr6_1:18052357-18052376 | Msa0877880:intron | 20.0% |
| !!! | TTTTTAGTATCAATGATACT+TGG | - | chr6_1:18052427-18052446 | Msa0877880:intron | 20.0% |
| !!! | TTTCTAGTTTCTTCTTAATT+TGG | - | chr6_1:18052491-18052510 | Msa0877880:CDS | 20.0% |
| !!! | TTTTTAGGAATGTATATGTT+TGG | - | chr6_1:18052652-18052671 | Msa0877880:intron | 20.0% |
| !!! | ATTGGTTATTTTAATCCTTA+AGG | - | chr6_1:18052774-18052793 | Msa0877880:intron | 20.0% |
| !!! | AAAATATACGAAAACCTTTT+GGG | - | chr6_1:18052840-18052859 | Msa0877880:intron | 20.0% |
| !! | ATAACAATATGCACAAAAAA+AGG | + | chr6_1:18053335-18053354 | None:intergenic | 20.0% |
| !! | TCTCAGAATGAATTAAAATA+TGG | - | chr6_1:18053365-18053384 | Msa0877880:intron | 20.0% |
| !! | CTCAGAATGAATTAAAATAT+GGG | - | chr6_1:18053366-18053385 | Msa0877880:intron | 20.0% |
| !! | TTAACGTCTAGAAAATAATT+CGG | - | chr6_1:18053444-18053463 | Msa0877880:CDS | 20.0% |
| !! | ATAATACATTAAGAAAGCAA+GGG | + | chr6_1:18053588-18053607 | None:intergenic | 20.0% |
| !! | TTAATGTATTATGCCAATAT+TGG | - | chr6_1:18053596-18053615 | Msa0877880:intron | 20.0% |
| !! | GTATAAGATTTAAAAACTAG+AGG | + | chr6_1:18053680-18053699 | None:intergenic | 20.0% |
| !!! | TTTTTAACTTTACGTTTTGT+AGG | - | chr6_1:18053706-18053725 | Msa0877880:intron | 20.0% |
| !! | GAAAAAGAATTATTGTTAAG+AGG | + | chr6_1:18053769-18053788 | None:intergenic | 20.0% |
| !!! | TTAATTTCTACCTTTTTTAG+TGG | - | chr6_1:18054949-18054968 | Msa0877880:intron | 20.0% |
| !! | TCTCAATATTTCTTATTATG+TGG | - | chr6_1:18055060-18055079 | Msa0877880:intron | 20.0% |
| !! | ATTCAAATTTCAAACAAGAT+GGG | + | chr6_1:18055213-18055232 | None:intergenic | 20.0% |
| !! | TATTCAAATTTCAAACAAGA+TGG | + | chr6_1:18055214-18055233 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCACGTATGTTTT+TGG | + | chr6_1:18055449-18055468 | None:intergenic | 20.0% |
| !! | CATATTATACTTGCAATATT+TGG | + | chr6_1:18055499-18055518 | None:intergenic | 20.0% |
| !!! | AATTATTATCGGATACTTTT+TGG | - | chr6_1:18055923-18055942 | Msa0877880:intron | 20.0% |
| !! | GACTATATATAGGTATATAT+AGG | + | chr6_1:18055974-18055993 | None:intergenic | 20.0% |
| !! | AAAAATGGAAGACTATATAT+AGG | + | chr6_1:18055984-18056003 | None:intergenic | 20.0% |
| !! | AAATATCAATCACATGAAAA+TGG | + | chr6_1:18056719-18056738 | None:intergenic | 20.0% |
| !! | ATGTAAAATGTTATATCAAC+CGG | + | chr6_1:18056915-18056934 | None:intergenic | 20.0% |
| !! | TTAAATTATCTATAAGCTCA+AGG | + | chr6_1:18056966-18056985 | None:intergenic | 20.0% |
| !! | TATAAATAACAACTTTCTCT+TGG | - | chr6_1:18057093-18057112 | Msa0877880:five_prime_UTR | 20.0% |
| !!! | ATTTTTGTTTTTCAGGAAGT+TGG | + | chr6_1:18046668-18046687 | None:intergenic | 25.0% |
| ! | ACATCACAAAAACACAAAAA+AGG | + | chr6_1:18046893-18046912 | None:intergenic | 25.0% |
| !!! | GTGTTTTTGTGATGTTTTTT+AGG | - | chr6_1:18046898-18046917 | Msa0877880:three_prime_UTR | 25.0% |
| !!! | GATGTTTTTTAGGATAAAAC+CGG | - | chr6_1:18046908-18046927 | Msa0877880:exon | 25.0% |
| !!! | AAAATCAAAACTTTGGAACT+GGG | + | chr6_1:18047018-18047037 | None:intergenic | 25.0% |
| !!! | AAAAATCAAAACTTTGGAAC+TGG | + | chr6_1:18047019-18047038 | None:intergenic | 25.0% |
| !!! | GTTCCAAAGTTTTGATTTTT+TGG | - | chr6_1:18047019-18047038 | Msa0877880:CDS | 25.0% |
| ! | GAGCTTATAGTTATACATAA+GGG | + | chr6_1:18047165-18047184 | None:intergenic | 25.0% |
| ! | AGAGCTTATAGTTATACATA+AGG | + | chr6_1:18047166-18047185 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr6_1:18047216-18047235 | None:intergenic | 25.0% |
| ! | AACAACAGTTGTATATATAG+GGG | + | chr6_1:18047457-18047476 | None:intergenic | 25.0% |
| ! | ATACAACTGTTGTTAAATAG+TGG | - | chr6_1:18047463-18047482 | Msa0877880:intron | 25.0% |
| ! | AAAAGTTAAAACTTGGAAAC+CGG | + | chr6_1:18047567-18047586 | None:intergenic | 25.0% |
| ! | CTCTACAAAAAGTTAAAACT+TGG | + | chr6_1:18047574-18047593 | None:intergenic | 25.0% |
| !!! | CAAGTTTTAACTTTTTGTAG+AGG | - | chr6_1:18047572-18047591 | Msa0877880:CDS | 25.0% |
| !!! | AGTTTTAACTTTTTGTAGAG+GGG | - | chr6_1:18047574-18047593 | Msa0877880:CDS | 25.0% |
| ! | CAATGAGCAATATAAACAAA+AGG | + | chr6_1:18047952-18047971 | None:intergenic | 25.0% |
| ! | TCTTAATCTTATTATGGCAA+TGG | - | chr6_1:18048456-18048475 | Msa0877880:intron | 25.0% |
| ! | TTCAAACAACAAAACCAAAA+GGG | + | chr6_1:18048505-18048524 | None:intergenic | 25.0% |
| ! | TTTCAAACAACAAAACCAAA+AGG | + | chr6_1:18048506-18048525 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTTGTTGTTTGAA+AGG | - | chr6_1:18048505-18048524 | Msa0877880:intron | 25.0% |
| !!! | TTTTGTTGTTTGAAAGGTTT+TGG | - | chr6_1:18048511-18048530 | Msa0877880:intron | 25.0% |
| !! | GTCTATTTCTTGTGTATTTA+AGG | - | chr6_1:18048582-18048601 | Msa0877880:intron | 25.0% |
| !! | AGACTATTTCTTATTAGCAT+AGG | + | chr6_1:18048608-18048627 | None:intergenic | 25.0% |
| ! | AAATTGTTAATTTCTGCGAT+AGG | - | chr6_1:18048865-18048884 | Msa0877880:intron | 25.0% |
| !! | GACAATAAGTTTACTCATTT+TGG | + | chr6_1:18048941-18048960 | None:intergenic | 25.0% |
| ! | GAGTAAACTTATTGTCAATT+TGG | - | chr6_1:18048945-18048964 | Msa0877880:intron | 25.0% |
| ! | TCTTCTAATGATAACATTTG+GGG | + | chr6_1:18048994-18049013 | None:intergenic | 25.0% |
| ! | GATCTTCTAATGATAACATT+TGG | + | chr6_1:18048996-18049015 | None:intergenic | 25.0% |
| ! | AGAAGATCTTGAAAGATATT+TGG | - | chr6_1:18049008-18049027 | Msa0877880:intron | 25.0% |
| ! | TTACATTCGTTTCATTAGAA+AGG | - | chr6_1:18049288-18049307 | Msa0877880:intron | 25.0% |
| ! | TAGAAAGGTTAATGATAAGA+AGG | - | chr6_1:18049303-18049322 | Msa0877880:intron | 25.0% |
| ! | AGAAAGGTTAATGATAAGAA+GGG | - | chr6_1:18049304-18049323 | Msa0877880:intron | 25.0% |
| ! | AACTGAAATACACAACTAAT+AGG | + | chr6_1:18049405-18049424 | None:intergenic | 25.0% |
| !! | ATTCCAAAAAATTTTGTCGT+TGG | + | chr6_1:18049781-18049800 | None:intergenic | 25.0% |
| !!! | GGTATCACTTTTCAAAATTT+TGG | - | chr6_1:18050465-18050484 | Msa0877880:intron | 25.0% |
| ! | TGATTCTGTAGTTTCTATTA+AGG | - | chr6_1:18050682-18050701 | Msa0877880:intron | 25.0% |
| !!! | AGTTTTTCGATGAAATTGAT+TGG | - | chr6_1:18050805-18050824 | Msa0877880:intron | 25.0% |
| !! | TTTAAGTTTAACTGTTGACA+TGG | - | chr6_1:18051426-18051445 | Msa0877880:intron | 25.0% |
| ! | AACGATGTTTACTTAACATT+TGG | - | chr6_1:18051588-18051607 | Msa0877880:intron | 25.0% |
| ! | AGTAAATATAACTCGTTTGT+TGG | + | chr6_1:18051669-18051688 | None:intergenic | 25.0% |
| ! | AGTTATATTTACTTATGAGC+AGG | - | chr6_1:18051676-18051695 | Msa0877880:intron | 25.0% |
| ! | GATACTGTTTAAAGGATAAA+AGG | + | chr6_1:18051725-18051744 | None:intergenic | 25.0% |
| !! | AATTTCTTACTGCATTTTAC+TGG | - | chr6_1:18051897-18051916 | Msa0877880:intron | 25.0% |
| ! | GTTGTGAATAAAAACGATAT+AGG | + | chr6_1:18052094-18052113 | None:intergenic | 25.0% |
| ! | ATGACAGAGCAATTAAATAA+AGG | + | chr6_1:18052203-18052222 | None:intergenic | 25.0% |
| ! | TACCAAATGGATATATGAAA+TGG | - | chr6_1:18052301-18052320 | Msa0877880:intron | 25.0% |
| ! | TTCCATTTCATATATCCATT+TGG | + | chr6_1:18052306-18052325 | None:intergenic | 25.0% |
| ! | ATTTATATTATTGGGAGTTG+TGG | - | chr6_1:18052335-18052354 | Msa0877880:intron | 25.0% |
| ! | TTTATATTATTGGGAGTTGT+GGG | - | chr6_1:18052336-18052355 | Msa0877880:intron | 25.0% |
| ! | TTTCAACGAATTACTTAAGT+GGG | + | chr6_1:18052457-18052476 | None:intergenic | 25.0% |
| ! | GAAGAAACTAGAAAAGATTT+AGG | + | chr6_1:18052485-18052504 | None:intergenic | 25.0% |
| !!! | TTCTTAATTTGGTTTTAGAG+CGG | - | chr6_1:18052502-18052521 | Msa0877880:CDS | 25.0% |
| !!! | TGGAAAAGTCTATCTTTTTT+AGG | - | chr6_1:18052637-18052656 | Msa0877880:intron | 25.0% |
| !!! | TGGAGGCATAATAATTTTTT+TGG | - | chr6_1:18052672-18052691 | Msa0877880:intron | 25.0% |
| !!! | TTTTTGGCTTAATCATACTT+TGG | - | chr6_1:18052688-18052707 | Msa0877880:intron | 25.0% |
| ! | AGATATCATATGACACATAT+GGG | + | chr6_1:18052729-18052748 | None:intergenic | 25.0% |
| ! | AAGATATCATATGACACATA+TGG | + | chr6_1:18052730-18052749 | None:intergenic | 25.0% |
| ! | TTAAAATAACCAATGAAGAC+AGG | + | chr6_1:18052768-18052787 | None:intergenic | 25.0% |
| !!! | TTGTTTTCTTGTTTTGTTTC+AGG | - | chr6_1:18052809-18052828 | Msa0877880:intron | 25.0% |
| !! | GAAAATATACGAAAACCTTT+TGG | - | chr6_1:18052839-18052858 | Msa0877880:intron | 25.0% |
| ! | ACTTGTTCAAAACTCATTAA+TGG | - | chr6_1:18053007-18053026 | Msa0877880:CDS | 25.0% |
| ! | TAAAGAAAAATAATGGCAGA+GGG | + | chr6_1:18053070-18053089 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAATAATGGCAG+AGG | + | chr6_1:18053071-18053090 | None:intergenic | 25.0% |
| ! | CTCTCGTTAAAGAAAAATAA+TGG | + | chr6_1:18053077-18053096 | None:intergenic | 25.0% |
| ! | AACTCACTCAAGAATATAAA+CGG | + | chr6_1:18053532-18053551 | None:intergenic | 25.0% |
| ! | CATAATACATTAAGAAAGCA+AGG | + | chr6_1:18053589-18053608 | None:intergenic | 25.0% |
| ! | ATTTAAAAACTAGAGGAAAC+AGG | + | chr6_1:18053673-18053692 | None:intergenic | 25.0% |
| !!! | GAATATTTTTTGAAGGAACA+AGG | + | chr6_1:18053955-18053974 | None:intergenic | 25.0% |
| ! | TGTTCCTTCAAAAAATATTC+TGG | - | chr6_1:18053955-18053974 | Msa0877880:intron | 25.0% |
| !!! | GATTCCAGAATATTTTTTGA+AGG | + | chr6_1:18053962-18053981 | None:intergenic | 25.0% |
| ! | TCACATATTTGTTCTCAAAA+TGG | + | chr6_1:18054015-18054034 | None:intergenic | 25.0% |
| ! | AATTTATGTGCTTATTCAGT+TGG | - | chr6_1:18054154-18054173 | Msa0877880:intron | 25.0% |
| ! | TTAAGTTTGAGCAAACTTAT+GGG | - | chr6_1:18054252-18054271 | Msa0877880:intron | 25.0% |
| ! | AAATCCTTGATGGAAAAAAT+TGG | - | chr6_1:18054416-18054435 | Msa0877880:intron | 25.0% |
| ! | AATCCTTGATGGAAAAAATT+GGG | - | chr6_1:18054417-18054436 | Msa0877880:intron | 25.0% |
| ! | TTTATCCATGTATCATATGT+AGG | - | chr6_1:18054654-18054673 | Msa0877880:intron | 25.0% |
| !! | ATGATCTTGATAATTTATCC+CGG | - | chr6_1:18054791-18054810 | Msa0877880:intron | 25.0% |
| !!! | CTTAATGGATCAACTTTTAT+AGG | - | chr6_1:18055011-18055030 | Msa0877880:intron | 25.0% |
| ! | ATTATCTTCATTCTTGAACT+TGG | - | chr6_1:18055035-18055054 | Msa0877880:intron | 25.0% |
| ! | TATTTCAACTACATCTTCAA+AGG | - | chr6_1:18055125-18055144 | Msa0877880:intron | 25.0% |
| ! | CATATCTTCTATAGTGAATT+TGG | + | chr6_1:18055280-18055299 | None:intergenic | 25.0% |
| !! | ATATAGTTACTGGATTTTGA+AGG | + | chr6_1:18055346-18055365 | None:intergenic | 25.0% |
| ! | AAAATCCAGTAACTATATGT+TGG | - | chr6_1:18055348-18055367 | Msa0877880:intron | 25.0% |
| ! | ATATACCAACATATAGTTAC+TGG | + | chr6_1:18055356-18055375 | None:intergenic | 25.0% |
| ! | AAATCAAAAAGAAAAGGCAA+AGG | + | chr6_1:18056320-18056339 | None:intergenic | 25.0% |
| !!! | TTGCCTTTTCTTTTTGATTT+TGG | - | chr6_1:18056320-18056339 | Msa0877880:intron | 25.0% |
| ! | CATAATTGACGTAAATTCAT+TGG | + | chr6_1:18056601-18056620 | None:intergenic | 25.0% |
| ! | TGTGAAAACATAAAGAAGAA+AGG | + | chr6_1:18056688-18056707 | None:intergenic | 25.0% |
| !!! | AAGGTCTTTTGATTTACATA+GGG | + | chr6_1:18056943-18056962 | None:intergenic | 25.0% |
| ! | TACAATACTACATCATAGAT+TGG | + | chr6_1:18057035-18057054 | None:intergenic | 25.0% |
| ! | ATGAGAAATTAAGCTTAGTA+AGG | + | chr6_1:18057074-18057093 | None:intergenic | 25.0% |
| ATTATACCATTACGTTTGAG+AGG | + | chr6_1:18046809-18046828 | None:intergenic | 30.0% | |
| ! | TGGTACTGAAAAGAAAACAA+TGG | - | chr6_1:18046934-18046953 | Msa0877880:CDS | 30.0% |
| !! | TTCATTAGCCAATTTTTCAG+CGG | + | chr6_1:18046981-18047000 | None:intergenic | 30.0% |
| GATAAGTTGTTTATCCAAAC+AGG | + | chr6_1:18047217-18047236 | None:intergenic | 30.0% | |
| ! | TGTATATATAGGGGTATGTT+TGG | + | chr6_1:18047448-18047467 | None:intergenic | 30.0% |
| AAAGTTAAAACTTGGAAACC+GGG | + | chr6_1:18047566-18047585 | None:intergenic | 30.0% | |
| ATATTAGTGTTGTCGAATTG+TGG | - | chr6_1:18047611-18047630 | Msa0877880:CDS | 30.0% | |
| AATATAAGACTATAGTGCAG+TGG | - | chr6_1:18047635-18047654 | Msa0877880:CDS | 30.0% | |
| TACAACTCGTTGTCAAATAA+TGG | - | chr6_1:18047698-18047717 | Msa0877880:CDS | 30.0% | |
| TTGTCAAATAATGGCTATGT+CGG | - | chr6_1:18047707-18047726 | Msa0877880:CDS | 30.0% | |
| !! | TTAGCATTTGTTTTTCACAG+TGG | - | chr6_1:18047990-18048009 | Msa0877880:intron | 30.0% |
| GGGTCAAAGAATTACATATT+TGG | + | chr6_1:18048053-18048072 | None:intergenic | 30.0% | |
| CAATGAGCAAAATGAACAAA+GGG | + | chr6_1:18048073-18048092 | None:intergenic | 30.0% | |
| TCAATGAGCAAAATGAACAA+AGG | + | chr6_1:18048074-18048093 | None:intergenic | 30.0% | |
| !! | TTGTTTCTCTGTTGTTGTTT+AGG | - | chr6_1:18048099-18048118 | Msa0877880:intron | 30.0% |
| ! | TAGTTTCTTTTACTCCCTTT+TGG | - | chr6_1:18048488-18048507 | Msa0877880:intron | 30.0% |
| AATAGTCTATGCTTTACTGT+TGG | - | chr6_1:18048620-18048639 | Msa0877880:intron | 30.0% | |
| CTTATATTTACAACTGCAGT+AGG | + | chr6_1:18048907-18048926 | None:intergenic | 30.0% | |
| !!! | TTTACTCATTTTGGTTGAAC+AGG | + | chr6_1:18048932-18048951 | None:intergenic | 30.0% |
| !!! | AGTTGTTTCTTTCTTTTTCC+TGG | - | chr6_1:18049065-18049084 | Msa0877880:CDS | 30.0% |
| ATTATGTAGACAGGAGAATA+TGG | + | chr6_1:18049121-18049140 | None:intergenic | 30.0% | |
| !!! | CAACTTGTGTTTTTTTCTTC+TGG | - | chr6_1:18049252-18049271 | Msa0877880:intron | 30.0% |
| !!! | GTTTTTTTCTTCTGGCTTAT+AGG | - | chr6_1:18049260-18049279 | Msa0877880:intron | 30.0% |
| GAAAGGTTAATGATAAGAAG+GGG | - | chr6_1:18049305-18049324 | Msa0877880:intron | 30.0% | |
| AAAGGTTAATGATAAGAAGG+GGG | - | chr6_1:18049306-18049325 | Msa0877880:intron | 30.0% | |
| ATACACAACTAATAGGACAA+TGG | + | chr6_1:18049398-18049417 | None:intergenic | 30.0% | |
| AAAGCTTAAAAATGCAAAGG+CGG | + | chr6_1:18049653-18049672 | None:intergenic | 30.0% | |
| CTCAAAGCTTAAAAATGCAA+AGG | + | chr6_1:18049656-18049675 | None:intergenic | 30.0% | |
| TCTAAAAATAAGAGCCTCTT+GGG | + | chr6_1:18049679-18049698 | None:intergenic | 30.0% | |
| ATCTAAAAATAAGAGCCTCT+TGG | + | chr6_1:18049680-18049699 | None:intergenic | 30.0% | |
| TACTTAAATAAGAGCCTCTT+GGG | + | chr6_1:18049732-18049751 | None:intergenic | 30.0% | |
| ATACTTAAATAAGAGCCTCT+TGG | + | chr6_1:18049733-18049752 | None:intergenic | 30.0% | |
| AATGCTGTTCTTGAATGTAT+TGG | - | chr6_1:18049868-18049887 | Msa0877880:intron | 30.0% | |
| TCATTCAATAGGACTCTAAA+AGG | + | chr6_1:18049938-18049957 | None:intergenic | 30.0% | |
| !!! | TTTTAGAGTCCTATTGAATG+AGG | - | chr6_1:18049937-18049956 | Msa0877880:CDS | 30.0% |
| GAGATAGATTGAAGTAAAAC+CGG | - | chr6_1:18049992-18050011 | Msa0877880:intron | 30.0% | |
| !!! | AACTGATTCCGTTTTTTGTT+AGG | - | chr6_1:18050080-18050099 | Msa0877880:intron | 30.0% |
| CACACAAAAGATTAACTAAC+CGG | + | chr6_1:18050413-18050432 | None:intergenic | 30.0% | |
| GTTATGCAATTCTCATTTCT+TGG | - | chr6_1:18050432-18050451 | Msa0877880:intron | 30.0% | |
| ! | TCATTTCTTGGTGCATAATT+TGG | - | chr6_1:18050444-18050463 | Msa0877880:intron | 30.0% |
| ACACCTTATCATCAAAATGT+AGG | + | chr6_1:18050708-18050727 | None:intergenic | 30.0% | |
| AACCAAAATATAATTCTGCG+AGG | - | chr6_1:18050760-18050779 | Msa0877880:intron | 30.0% | |
| ACCAAAATATAATTCTGCGA+GGG | - | chr6_1:18050761-18050780 | Msa0877880:intron | 30.0% | |
| !! | TGCTGAAGTTTTTGGATATT+TGG | + | chr6_1:18051009-18051028 | None:intergenic | 30.0% |
| AGTTGCTCATAATAGGATAT+TGG | + | chr6_1:18051193-18051212 | None:intergenic | 30.0% | |
| GCATTTCAAAACGATAAGTT+AGG | + | chr6_1:18051527-18051546 | None:intergenic | 30.0% | |
| TAGATAAATCTATGAGAGGA+AGG | + | chr6_1:18051569-18051588 | None:intergenic | 30.0% | |
| TCGTTAGATAAATCTATGAG+AGG | + | chr6_1:18051573-18051592 | None:intergenic | 30.0% | |
| !! | ATTTCCTCTGAAACAAAGAA+TGG | + | chr6_1:18051621-18051640 | None:intergenic | 30.0% |
| ! | AAATATAACTCGTTTGTTGG+AGG | + | chr6_1:18051666-18051685 | None:intergenic | 30.0% |
| TTTACTTATGAGCAGGTAAT+AGG | - | chr6_1:18051683-18051702 | Msa0877880:intron | 30.0% | |
| TTGAACTCTTAATCAGGATT+AGG | - | chr6_1:18051817-18051836 | Msa0877880:CDS | 30.0% | |
| ! | ATTATCCATGTCTTTTTCTG+CGG | - | chr6_1:18051846-18051865 | Msa0877880:CDS | 30.0% |
| TATGGTATGATTATGCTACA+TGG | - | chr6_1:18051958-18051977 | Msa0877880:intron | 30.0% | |
| ! | CTGCAATCAAAGTATTTCAA+AGG | - | chr6_1:18052006-18052025 | Msa0877880:intron | 30.0% |
| GTTTCAACGAATTACTTAAG+TGG | + | chr6_1:18052458-18052477 | None:intergenic | 30.0% | |
| AACTAGAAAAGATTTAGGAG+AGG | + | chr6_1:18052480-18052499 | None:intergenic | 30.0% | |
| !!! | TCTTAATTTGGTTTTAGAGC+GGG | - | chr6_1:18052503-18052522 | Msa0877880:CDS | 30.0% |
| !! | TTAGATTTTAGAGACACAAC+TGG | + | chr6_1:18052604-18052623 | None:intergenic | 30.0% |
| AATCTAATCTAGTACCTTCA+TGG | - | chr6_1:18052617-18052636 | Msa0877880:intron | 30.0% | |
| ! | AAAGATAGACTTTTCCATGA+AGG | + | chr6_1:18052634-18052653 | None:intergenic | 30.0% |
| TTAGGAATGTATATGTTTGG+AGG | - | chr6_1:18052655-18052674 | Msa0877880:intron | 30.0% | |
| CATACTTTGGATCTAGTAAA+AGG | - | chr6_1:18052701-18052720 | Msa0877880:intron | 30.0% | |
| !!! | TTTTTTAGTCCTGTCTTCAT+TGG | - | chr6_1:18052756-18052775 | Msa0877880:intron | 30.0% |
| AGACATGATATGTACAAGAT+GGG | + | chr6_1:18053253-18053272 | None:intergenic | 30.0% | |
| TAGACATGATATGTACAAGA+TGG | + | chr6_1:18053254-18053273 | None:intergenic | 30.0% | |
| TTGTACATATCATGTCTATG+TGG | - | chr6_1:18053256-18053275 | Msa0877880:CDS | 30.0% | |
| AAAGGAAATAGTAAGACCTT+GGG | + | chr6_1:18053317-18053336 | None:intergenic | 30.0% | |
| AAAAGGAAATAGTAAGACCT+TGG | + | chr6_1:18053318-18053337 | None:intergenic | 30.0% | |
| !!! | TTGCTTGTTATTTTAAGCAC+TGG | - | chr6_1:18053412-18053431 | Msa0877880:intron | 30.0% |
| ACTCACTCAAGAATATAAAC+GGG | + | chr6_1:18053531-18053550 | None:intergenic | 30.0% | |
| AAACAGGATTAATCAGAGAT+GGG | + | chr6_1:18053564-18053583 | None:intergenic | 30.0% | |
| AAAACAGGATTAATCAGAGA+TGG | + | chr6_1:18053565-18053584 | None:intergenic | 30.0% | |
| AAAATAACGAAGTACATGCA+TGG | - | chr6_1:18054060-18054079 | Msa0877880:intron | 30.0% | |
| TTGCAACTAATTTCACTTGT+AGG | - | chr6_1:18054214-18054233 | Msa0877880:intron | 30.0% | |
| ACTAATTTCACTTGTAGGTT+TGG | - | chr6_1:18054219-18054238 | Msa0877880:intron | 30.0% | |
| GTTAAGTTTGAGCAAACTTA+TGG | - | chr6_1:18054251-18054270 | Msa0877880:intron | 30.0% | |
| TAAGTTTGAGCAAACTTATG+GGG | - | chr6_1:18054253-18054272 | Msa0877880:intron | 30.0% | |
| !! | TTTCTTTTTCGTCTGATTCT+TGG | - | chr6_1:18054349-18054368 | Msa0877880:intron | 30.0% |
| ATATGAAAGGAAATCCTTGA+TGG | - | chr6_1:18054406-18054425 | Msa0877880:intron | 30.0% | |
| !!! | TATCCCAATTTTTTCCATCA+AGG | + | chr6_1:18054423-18054442 | None:intergenic | 30.0% |
| TGTATCACGATATAGTTTCA+TGG | - | chr6_1:18054747-18054766 | Msa0877880:intron | 30.0% | |
| GATATAGTTTCATGGATCTA+TGG | - | chr6_1:18054755-18054774 | Msa0877880:intron | 30.0% | |
| !! | TTTTGAAAGCTTTAGCTGTT+AGG | - | chr6_1:18054884-18054903 | Msa0877880:intron | 30.0% |
| ! | TTTTGACAAGCCACTAAAAA+AGG | + | chr6_1:18054962-18054981 | None:intergenic | 30.0% |
| TGTCAAAAATACGAAGAAAG+TGG | - | chr6_1:18054974-18054993 | Msa0877880:intron | 30.0% | |
| ATACACTATTGTTGCAGATA+AGG | - | chr6_1:18055089-18055108 | Msa0877880:intron | 30.0% | |
| TACACTATTGTTGCAGATAA+GGG | - | chr6_1:18055090-18055109 | Msa0877880:intron | 30.0% | |
| !! | ATCAACATCTTTGAAGTATC+AGG | + | chr6_1:18055159-18055178 | None:intergenic | 30.0% |
| !! | CGTTCTTTTCGCTATTTTAT+AGG | - | chr6_1:18055733-18055752 | Msa0877880:intron | 30.0% |
| CTAAAGACACATTTCTCATA+TGG | + | chr6_1:18055839-18055858 | None:intergenic | 30.0% | |
| !!! | TCTTCCATTTTTGAAGTGTA+TGG | - | chr6_1:18055992-18056011 | Msa0877880:intron | 30.0% |
| GATACCATACACTTCAAAAA+TGG | + | chr6_1:18055999-18056018 | None:intergenic | 30.0% | |
| GGTCCAAAATCAAAAAGAAA+AGG | + | chr6_1:18056326-18056345 | None:intergenic | 30.0% | |
| !!! | TTTTTGATTTTGGACCTGTT+TGG | - | chr6_1:18056330-18056349 | Msa0877880:intron | 30.0% |
| TATTTGTACAAGAGGAAACT+TGG | + | chr6_1:18056577-18056596 | None:intergenic | 30.0% | |
| ! | TCATTGGTTATTTGTACAAG+AGG | + | chr6_1:18056585-18056604 | None:intergenic | 30.0% |
| ATTTAGTATCATCTTCCTCT+TGG | + | chr6_1:18056760-18056779 | None:intergenic | 30.0% | |
| !!! | GAAGGTCTTTTGATTTACAT+AGG | + | chr6_1:18056944-18056963 | None:intergenic | 30.0% |
| ATTATCTATAAGCTCAAGGA+AGG | + | chr6_1:18056962-18056981 | None:intergenic | 30.0% | |
| !! | GGAAGTTGGAAGAGTTTTAT+AGG | + | chr6_1:18046654-18046673 | None:intergenic | 35.0% |
| AGTAGTTCTTTACGAAGAAC+AGG | - | chr6_1:18046721-18046740 | Msa0877880:three_prime_UTR | 35.0% | |
| TTGCTTGTAGAACAGAGATT+TGG | + | chr6_1:18046764-18046783 | None:intergenic | 35.0% | |
| !!! | GTTTTTTAGGATAAAACCGG+TGG | - | chr6_1:18046911-18046930 | Msa0877880:exon | 35.0% |
| AAAATTGGCTAATGAAGCTC+AGG | - | chr6_1:18046985-18047004 | Msa0877880:CDS | 35.0% | |
| AAGCTCTTTGTCTATTGTTG+AGG | - | chr6_1:18047179-18047198 | Msa0877880:intron | 35.0% | |
| ! | ATATAGGGGTATGTTTGGAT+TGG | + | chr6_1:18047443-18047462 | None:intergenic | 35.0% |
| TACAACGTGTTGTCAAATAG+CGG | - | chr6_1:18047524-18047543 | Msa0877880:intron | 35.0% | |
| GTGTATGCACAAAACAATAG+CGG | + | chr6_1:18047770-18047789 | None:intergenic | 35.0% | |
| TCAAATTGCGGTAATAGTAG+CGG | - | chr6_1:18047809-18047828 | Msa0877880:intron | 35.0% | |
| AATATCAGTGTTGTCATTCG+CGG | + | chr6_1:18047878-18047897 | None:intergenic | 35.0% | |
| ACAATAACACTTACAGCTGT+TGG | + | chr6_1:18048178-18048197 | None:intergenic | 35.0% | |
| ! | CAGCTGTAAGTGTTATTGTT+CGG | - | chr6_1:18048179-18048198 | Msa0877880:CDS | 35.0% |
| ! | ACTACTTCTGTGAGTGATTT+TGG | - | chr6_1:18048255-18048274 | Msa0877880:intron | 35.0% |
| TTTGGAAGGCTCTACTATTA+TGG | - | chr6_1:18048273-18048292 | Msa0877880:intron | 35.0% | |
| GAAGACAATTCAACAAACAG+CGG | + | chr6_1:18048412-18048431 | None:intergenic | 35.0% | |
| ! | CTGTTTGTTGAATTGTCTTC+AGG | - | chr6_1:18048412-18048431 | Msa0877880:intron | 35.0% |
| CGTAGTAGATCTATCTAACA+TGG | - | chr6_1:18048663-18048682 | Msa0877880:CDS | 35.0% | |
| TAACATGGAAACTTCCTCTA+GGG | - | chr6_1:18048678-18048697 | Msa0877880:CDS | 35.0% | |
| ! | AGAGGTTTATGATGGAATCA+TGG | - | chr6_1:18048711-18048730 | Msa0877880:CDS | 35.0% |
| AGTATAACGCATTGTCATAG+CGG | - | chr6_1:18048809-18048828 | Msa0877880:intron | 35.0% | |
| CTAATGATAACATTTGGGGA+AGG | + | chr6_1:18048990-18049009 | None:intergenic | 35.0% | |
| CAAACAATAGAAATTCTGCC+AGG | + | chr6_1:18049086-18049105 | None:intergenic | 35.0% | |
| ACAAGACAGAACTAATAAGC+AGG | + | chr6_1:18049198-18049217 | None:intergenic | 35.0% | |
| !! | TGCTTATTAGTTCTGTCTTG+TGG | - | chr6_1:18049197-18049216 | Msa0877880:intron | 35.0% |
| !!! | TTTTTCTTCTGGCTTATAGG+CGG | - | chr6_1:18049263-18049282 | Msa0877880:intron | 35.0% |
| GAATTTATGCTCAGCTATGT+TGG | - | chr6_1:18049361-18049380 | Msa0877880:intron | 35.0% | |
| AATTGTTGTAGCACCTAAGT+GGG | - | chr6_1:18049432-18049451 | Msa0877880:intron | 35.0% | |
| ! | CTAATAGAGTCTTTTGTGAG+AGG | - | chr6_1:18049476-18049495 | Msa0877880:intron | 35.0% |
| TAAACAGTCTCTACTGTAGA+AGG | - | chr6_1:18049531-18049550 | Msa0877880:intron | 35.0% | |
| AAACAGTCTCTACTGTAGAA+GGG | - | chr6_1:18049532-18049551 | Msa0877880:intron | 35.0% | |
| ! | CCAAAAAATTTTGTCGTTGG+TGG | + | chr6_1:18049778-18049797 | None:intergenic | 35.0% |
| !!! | CCACCAACGACAAAATTTTT+TGG | - | chr6_1:18049775-18049794 | Msa0877880:intron | 35.0% |
| TAGTTAGTTCATGATAGAGC+CGG | - | chr6_1:18049800-18049819 | Msa0877880:intron | 35.0% | |
| !! | TTCAGTAAAAAGGCGCTAAA+GGG | + | chr6_1:18049907-18049926 | None:intergenic | 35.0% |
| !! | ATTCAGTAAAAAGGCGCTAA+AGG | + | chr6_1:18049908-18049927 | None:intergenic | 35.0% |
| GGACTCTACATTCAGTAAAA+AGG | + | chr6_1:18049917-18049936 | None:intergenic | 35.0% | |
| AAGTAAAACCGGTCTGATTT+AGG | - | chr6_1:18050003-18050022 | Msa0877880:intron | 35.0% | |
| TTTGCGCTTCTTAGTTTATG+CGG | - | chr6_1:18050247-18050266 | Msa0877880:intron | 35.0% | |
| ! | TTTTCCAATGATGTGCTAAC+AGG | - | chr6_1:18050329-18050348 | Msa0877880:CDS | 35.0% |
| AGTTGTTCAATGTGATGTGT+AGG | + | chr6_1:18050580-18050599 | None:intergenic | 35.0% | |
| CACATCACATTGAACAACTT+TGG | - | chr6_1:18050581-18050600 | Msa0877880:CDS | 35.0% | |
| CACGAAATATTACCAACTTC+TGG | + | chr6_1:18050639-18050658 | None:intergenic | 35.0% | |
| !! | AGGCCTACATTTTGATGATA+AGG | - | chr6_1:18050702-18050721 | Msa0877880:intron | 35.0% |
| !! | TTGATGATAAGGTGTTTTGC+AGG | - | chr6_1:18050713-18050732 | Msa0877880:intron | 35.0% |
| TTCTGTTCCTCTGCAAATAT+TGG | - | chr6_1:18050870-18050889 | Msa0877880:intron | 35.0% | |
| AACGATACCAATATTTGCAG+AGG | + | chr6_1:18050880-18050899 | None:intergenic | 35.0% | |
| ! | AACCCTCTTTAGAGAGATTT+CGG | + | chr6_1:18050952-18050971 | None:intergenic | 35.0% |
| !! | ATCTCTCTAAAGAGGGTTTT+TGG | - | chr6_1:18050954-18050973 | Msa0877880:CDS | 35.0% |
| TATCCAAAAACTTCAGCAGT+TGG | - | chr6_1:18051011-18051030 | Msa0877880:intron | 35.0% | |
| TAAAGTTCGATACTCAACAC+CGG | + | chr6_1:18051149-18051168 | None:intergenic | 35.0% | |
| ! | TCAACCATTCTTTGTTTCAG+AGG | - | chr6_1:18051614-18051633 | Msa0877880:intron | 35.0% |
| ACCTACTTGAACTCTTAATC+AGG | - | chr6_1:18051811-18051830 | Msa0877880:CDS | 35.0% | |
| TCCTGATTAAGAGTTCAAGT+AGG | + | chr6_1:18051815-18051834 | None:intergenic | 35.0% | |
| GCAGAAAAAGACATGGATAA+TGG | + | chr6_1:18051847-18051866 | None:intergenic | 35.0% | |
| CATACCATACATCAGGATAA+TGG | + | chr6_1:18051947-18051966 | None:intergenic | 35.0% | |
| GCATAATCATACCATACATC+AGG | + | chr6_1:18051954-18051973 | None:intergenic | 35.0% | |
| AGTATTTCAAAGGTCTCTGA+AGG | - | chr6_1:18052016-18052035 | Msa0877880:intron | 35.0% | |
| AGACAAGCTAATACAAGAGA+AGG | + | chr6_1:18052142-18052161 | None:intergenic | 35.0% | |
| GCAATTCAGGTATTACCAAA+TGG | - | chr6_1:18052288-18052307 | Msa0877880:intron | 35.0% | |
| CAACGAATAAGAACTCCTTA+AGG | + | chr6_1:18052792-18052811 | None:intergenic | 35.0% | |
| TCAGTAAATATACTGCTGCA+TGG | - | chr6_1:18052960-18052979 | Msa0877880:CDS | 35.0% | |
| ! | CAGATGTCAAATCTTTTGCA+TGG | + | chr6_1:18053146-18053165 | None:intergenic | 35.0% |
| !! | CGTTTTCTAAGAAGAACTGA+AGG | - | chr6_1:18053185-18053204 | Msa0877880:intron | 35.0% |
| GACATGATATGTACAAGATG+GGG | + | chr6_1:18053252-18053271 | None:intergenic | 35.0% | |
| CAAGCAAGAAACACAATAGT+AGG | + | chr6_1:18053399-18053418 | None:intergenic | 35.0% | |
| TTAAGAAAGCAAGGGAAAAC+AGG | + | chr6_1:18053580-18053599 | None:intergenic | 35.0% | |
| CTGTTTGCATACTCCAATAT+TGG | + | chr6_1:18053612-18053631 | None:intergenic | 35.0% | |
| ! | AGAAAAGTATAACTTGTGCG+AGG | + | chr6_1:18053741-18053760 | None:intergenic | 35.0% |
| ! | ATATACGTGCTTTATTCGAG+AGG | - | chr6_1:18053873-18053892 | Msa0877880:intron | 35.0% |
| ! | TATACGTGCTTTATTCGAGA+GGG | - | chr6_1:18053874-18053893 | Msa0877880:intron | 35.0% |
| GAACAAGGAAATAAGAGTCA+AGG | + | chr6_1:18053940-18053959 | None:intergenic | 35.0% | |
| ! | TCTGGAATCTTAGTAGTACT+TGG | - | chr6_1:18053973-18053992 | Msa0877880:intron | 35.0% |
| TTAGTAGTACTTGGTTGACA+AGG | - | chr6_1:18053982-18054001 | Msa0877880:intron | 35.0% | |
| TTCACTTGTAGGTTTGGAAA+AGG | - | chr6_1:18054225-18054244 | Msa0877880:intron | 35.0% | |
| TCAGACGAAAAAGAAACAAC+CGG | + | chr6_1:18054345-18054364 | None:intergenic | 35.0% | |
| GTAATCGCTGATCATATGAA+AGG | - | chr6_1:18054393-18054412 | Msa0877880:intron | 35.0% | |
| CCTAATCTATGCAAAAGAGA+CGG | + | chr6_1:18054464-18054483 | None:intergenic | 35.0% | |
| CTCAACCTACATATGATACA+TGG | + | chr6_1:18054662-18054681 | None:intergenic | 35.0% | |
| ! | ATATGTAGGTTGAGCAAAGA+AGG | - | chr6_1:18054668-18054687 | Msa0877880:intron | 35.0% |
| GAGAAGTCTATTCTGCTTAA+TGG | - | chr6_1:18054996-18055015 | Msa0877880:intron | 35.0% | |
| GTAGTTGAAATACTTGCAGT+CGG | + | chr6_1:18055117-18055136 | None:intergenic | 35.0% | |
| TATGATCCAAAGCATAATCC+AGG | - | chr6_1:18055180-18055199 | Msa0877880:intron | 35.0% | |
| TACATACCTGGATTATGCTT+TGG | + | chr6_1:18055189-18055208 | None:intergenic | 35.0% | |
| ATAACGACCACAAATGTACA+CGG | + | chr6_1:18055528-18055547 | None:intergenic | 35.0% | |
| TGTACATTTGTGGTCGTTAT+GGG | - | chr6_1:18055528-18055547 | Msa0877880:intron | 35.0% | |
| TTGTTAACTTACCAATTCGC+AGG | - | chr6_1:18055567-18055586 | Msa0877880:intron | 35.0% | |
| TGTTAACTTACCAATTCGCA+GGG | - | chr6_1:18055568-18055587 | Msa0877880:intron | 35.0% | |
| TGAAAATTACCGTCAACTGA+AGG | + | chr6_1:18055675-18055694 | None:intergenic | 35.0% | |
| ! | AAGACGCATCTGAAAAGTAT+CGG | - | chr6_1:18055875-18055894 | Msa0877880:intron | 35.0% |
| ! | CAACCATGTTTGAAATTTGC+AGG | - | chr6_1:18056032-18056051 | Msa0877880:intron | 35.0% |
| !! | ACAATATCCACATTTGGTGT+TGG | + | chr6_1:18056059-18056078 | None:intergenic | 35.0% |
| GATAGCACAATATCCACATT+TGG | + | chr6_1:18056065-18056084 | None:intergenic | 35.0% | |
| AGCATGAAGTATAGTCGAAA+GGG | + | chr6_1:18056289-18056308 | None:intergenic | 35.0% | |
| AAGCATGAAGTATAGTCGAA+AGG | + | chr6_1:18056290-18056309 | None:intergenic | 35.0% | |
| AGATGTAAAGCAATCCAAAC+AGG | + | chr6_1:18056347-18056366 | None:intergenic | 35.0% | |
| CATACCAACTTGTAACAAAG+CGG | - | chr6_1:18056419-18056438 | Msa0877880:intron | 35.0% | |
| TTGAACATAATCACATGTGC+TGG | + | chr6_1:18056474-18056493 | None:intergenic | 35.0% | |
| ATAATAATGTTCAGGCCAAG+AGG | - | chr6_1:18056742-18056761 | Msa0877880:intron | 35.0% | |
| CAAACAGGATCAGTTTCATA+TGG | - | chr6_1:18056857-18056876 | Msa0877880:CDS | 35.0% | |
| !!! | TTTTAGGATAAAACCGGTGG+TGG | - | chr6_1:18046914-18046933 | Msa0877880:exon | 40.0% |
| ! | TTTCTTTTCAGTACCACCAC+CGG | + | chr6_1:18046930-18046949 | None:intergenic | 40.0% |
| TGTCGAATCCGCTGAAAAAT+TGG | - | chr6_1:18046970-18046989 | Msa0877880:CDS | 40.0% | |
| GGTCAAACTTAAACCCTGTT+TGG | - | chr6_1:18047200-18047219 | Msa0877880:intron | 40.0% | |
| TGTCAAATAGCGGCTATAGT+AGG | - | chr6_1:18047534-18047553 | Msa0877880:intron | 40.0% | |
| ACAGAAGCTGCTAGTACATA+CGG | + | chr6_1:18048022-18048041 | None:intergenic | 40.0% | |
| ! | CTTCTGTGAGTGATTTTGGA+AGG | - | chr6_1:18048259-18048278 | Msa0877880:intron | 40.0% |
| GCTTATTTGGATTTGTGTCC+AGG | - | chr6_1:18048313-18048332 | Msa0877880:intron | 40.0% | |
| CACATACTGCTTCCAAAACT+TGG | + | chr6_1:18048339-18048358 | None:intergenic | 40.0% | |
| !!! | CAAGTTTTGGAAGCAGTATG+TGG | - | chr6_1:18048337-18048356 | Msa0877880:intron | 40.0% |
| GTCTATGCTTTACTGTTGGT+CGG | - | chr6_1:18048624-18048643 | Msa0877880:intron | 40.0% | |
| CTAACATGGAAACTTCCTCT+AGG | - | chr6_1:18048677-18048696 | Msa0877880:CDS | 40.0% | |
| AACATGGAAACTTCCTCTAG+GGG | - | chr6_1:18048679-18048698 | Msa0877880:CDS | 40.0% | |
| GAATTGTTGTAGCACCTAAG+TGG | - | chr6_1:18049431-18049450 | Msa0877880:intron | 40.0% | |
| TTTGTGAGAGGAAGAGTTCT+TGG | - | chr6_1:18049488-18049507 | Msa0877880:intron | 40.0% | |
| TTGTGAGAGGAAGAGTTCTT+GGG | - | chr6_1:18049489-18049508 | Msa0877880:intron | 40.0% | |
| AACAGTCTCTACTGTAGAAG+GGG | - | chr6_1:18049533-18049552 | Msa0877880:intron | 40.0% | |
| !!! | TTTTAAGCTTTGAGCCCAAG+AGG | - | chr6_1:18049662-18049681 | Msa0877880:intron | 40.0% |
| TTGACTGCTCCTCATTCAAT+AGG | + | chr6_1:18049949-18049968 | None:intergenic | 40.0% | |
| ! | GGAATCAGTTTCTGTTTTCG+AGG | + | chr6_1:18050070-18050089 | None:intergenic | 40.0% |
| TGATCCTGTTAGCACATCAT+TGG | + | chr6_1:18050336-18050355 | None:intergenic | 40.0% | |
| !! | AGCCTTTCTAAAGTCATTGC+CGG | - | chr6_1:18050391-18050410 | Msa0877880:intron | 40.0% |
| ! | AACCGGCAATGACTTTAGAA+AGG | + | chr6_1:18050396-18050415 | None:intergenic | 40.0% |
| TTTGGGTCGATTACAATTGC+AGG | - | chr6_1:18050483-18050502 | Msa0877880:intron | 40.0% | |
| ACCCACAAGAAGAAACACAT+CGG | - | chr6_1:18050512-18050531 | Msa0877880:intron | 40.0% | |
| TCCGATGTGTTTCTTCTTGT+GGG | + | chr6_1:18050516-18050535 | None:intergenic | 40.0% | |
| ATCCGATGTGTTTCTTCTTG+TGG | + | chr6_1:18050517-18050536 | None:intergenic | 40.0% | |
| TAGGAGTAATAATAGCCCTC+TGG | + | chr6_1:18050561-18050580 | None:intergenic | 40.0% | |
| AAGTTCTGTTAGCCAGAAGT+TGG | - | chr6_1:18050624-18050643 | Msa0877880:CDS | 40.0% | |
| !! | TAAGGTGTTTTGCAGGCTAA+AGG | - | chr6_1:18050720-18050739 | Msa0877880:intron | 40.0% |
| ! | GCCCTCGCAGAATTATATTT+TGG | + | chr6_1:18050765-18050784 | None:intergenic | 40.0% |
| ! | CTCCGAAATCTCTCTAAAGA+GGG | - | chr6_1:18050947-18050966 | Msa0877880:CDS | 40.0% |
| ! | GTACCAACTGCTGAAGTTTT+TGG | + | chr6_1:18051017-18051036 | None:intergenic | 40.0% |
| ACTCTCACGTAAGAGTTCAT+TGG | - | chr6_1:18051074-18051093 | Msa0877880:intron | 40.0% | |
| TTTAGACCACCTAGTCATAG+AGG | - | chr6_1:18051165-18051184 | Msa0877880:intron | 40.0% | |
| ATATTGGAGCCTCTATGACT+AGG | + | chr6_1:18051177-18051196 | None:intergenic | 40.0% | |
| ! | TCGTGTTTGTTTCTTCTGAC+AGG | - | chr6_1:18051284-18051303 | Msa0877880:CDS | 40.0% |
| GAAGCAATGTCTATTCTCTG+TGG | + | chr6_1:18051644-18051663 | None:intergenic | 40.0% | |
| TATCACCGCAGAAAAAGACA+TGG | + | chr6_1:18051854-18051873 | None:intergenic | 40.0% | |
| ATATGCTTATGCAGAGCTAG+AGG | - | chr6_1:18052254-18052273 | Msa0877880:intron | 40.0% | |
| TAATACCTGAATTGCTCCAC+GGG | + | chr6_1:18052283-18052302 | None:intergenic | 40.0% | |
| GTAATACCTGAATTGCTCCA+CGG | + | chr6_1:18052284-18052303 | None:intergenic | 40.0% | |
| TTGCTTCTGCTCTCAATATC+TGG | - | chr6_1:18052533-18052552 | Msa0877880:intron | 40.0% | |
| TGCTTCTGCTCTCAATATCT+GGG | - | chr6_1:18052534-18052553 | Msa0877880:intron | 40.0% | |
| !! | GATTTTAGAGACACAACTGG+CGG | + | chr6_1:18052601-18052620 | None:intergenic | 40.0% |
| GGGATCTTTGTCAAGACAAA+AGG | + | chr6_1:18053297-18053316 | None:intergenic | 40.0% | |
| TTGTCTTGACAAAGATCCCA+AGG | - | chr6_1:18053298-18053317 | Msa0877880:CDS | 40.0% | |
| ATTCGGATTATCCATGCAGA+TGG | - | chr6_1:18053461-18053480 | Msa0877880:CDS | 40.0% | |
| AACATTATGAGCCATCTGCA+TGG | + | chr6_1:18053475-18053494 | None:intergenic | 40.0% | |
| ! | GCTCATAATGTTTTCGAAGC+AGG | - | chr6_1:18053483-18053502 | Msa0877880:intron | 40.0% |
| ACAGCTCCATTACATGCATT+CGG | - | chr6_1:18053628-18053647 | Msa0877880:intron | 40.0% | |
| ATTGAGTTCACTTCCTCTAG+AGG | - | chr6_1:18053898-18053917 | Msa0877880:intron | 40.0% | |
| ! | AACTTTTACCTTGCTACGTC+CGG | - | chr6_1:18054323-18054342 | Msa0877880:intron | 40.0% |
| ! | CCGTCTCTTTTGCATAGATT+AGG | - | chr6_1:18054461-18054480 | Msa0877880:CDS | 40.0% |
| TCAAAGCTTGGATTGATACG+TGG | + | chr6_1:18054498-18054517 | None:intergenic | 40.0% | |
| ! | GTCAAGTATTGCTCAAAGCT+TGG | + | chr6_1:18054510-18054529 | None:intergenic | 40.0% |
| TCGAATAGACTGCACACATA+TGG | - | chr6_1:18054611-18054630 | Msa0877880:intron | 40.0% | |
| CGAATAGACTGCACACATAT+GGG | - | chr6_1:18054612-18054631 | Msa0877880:intron | 40.0% | |
| !! | CAAAGAAGGAAAGAAGCGTT+TGG | - | chr6_1:18054682-18054701 | Msa0877880:intron | 40.0% |
| TCAAGATCATTCGAAGTGCA+CGG | + | chr6_1:18054781-18054800 | None:intergenic | 40.0% | |
| TGATAATTTATCCCGGCAAG+AGG | - | chr6_1:18054798-18054817 | Msa0877880:intron | 40.0% | |
| !! | AACAAGATGGGTTACATACC+TGG | + | chr6_1:18055201-18055220 | None:intergenic | 40.0% |
| GTGTACATTTGTGGTCGTTA+TGG | - | chr6_1:18055527-18055546 | Msa0877880:intron | 40.0% | |
| GTACATTTGTGGTCGTTATG+GGG | - | chr6_1:18055529-18055548 | Msa0877880:intron | 40.0% | |
| AATTACCGTCAACTGAAGGT+AGG | + | chr6_1:18055671-18055690 | None:intergenic | 40.0% | |
| GGACCTGCAAATTTCAAACA+TGG | + | chr6_1:18056038-18056057 | None:intergenic | 40.0% | |
| ATTCCATCACAATTGCCAGT+AGG | - | chr6_1:18056134-18056153 | Msa0877880:intron | 40.0% | |
| ! | GAGATAAGCCACTTTGAACA+GGG | + | chr6_1:18056205-18056224 | None:intergenic | 40.0% |
| ! | TGAGATAAGCCACTTTGAAC+AGG | + | chr6_1:18056206-18056225 | None:intergenic | 40.0% |
| TTTCCCGTATTGCTTTCTAC+CGG | + | chr6_1:18056237-18056256 | None:intergenic | 40.0% | |
| GTAGAAAGCAATACGGGAAA+AGG | - | chr6_1:18056237-18056256 | Msa0877880:intron | 40.0% | |
| !! | TCATATGGAAGTGCTCTTTC+TGG | - | chr6_1:18056872-18056891 | Msa0877880:CDS | 40.0% |
| TCGTTGCCTCTCAAACGTAA+TGG | - | chr6_1:18046800-18046819 | Msa0877880:three_prime_UTR | 45.0% | |
| TCACGTGTATTGCACGACAA+TGG | + | chr6_1:18047499-18047518 | None:intergenic | 45.0% | |
| !! | GGCTATAGTAGGTTTTGACC+CGG | - | chr6_1:18047545-18047564 | Msa0877880:intron | 45.0% |
| !! | CGAAAGTACTGTAGCATCGT+CGG | - | chr6_1:18047732-18047751 | Msa0877880:CDS | 45.0% |
| GGTATAGCACTGTAGTGTAG+TGG | - | chr6_1:18047830-18047849 | Msa0877880:intron | 45.0% | |
| TGTGGCTTCTGCAATAGACA+AGG | + | chr6_1:18048125-18048144 | None:intergenic | 45.0% | |
| AAGCTGCTCGTATATTGGTG+TGG | + | chr6_1:18048143-18048162 | None:intergenic | 45.0% | |
| TGCAGAAGCTGCTCGTATAT+TGG | + | chr6_1:18048148-18048167 | None:intergenic | 45.0% | |
| ! | TTTGTGTCCAGGCCAAGTTT+TGG | - | chr6_1:18048324-18048343 | Msa0877880:intron | 45.0% |
| !!! | GTTTTGGAAGCAGTATGTGG+AGG | - | chr6_1:18048340-18048359 | Msa0877880:intron | 45.0% |
| ! | ATTGTCTTCAGGTTCCTCTC+TGG | - | chr6_1:18048423-18048442 | Msa0877880:intron | 45.0% |
| AAGAGAACAACGTACCAGAG+AGG | + | chr6_1:18048440-18048459 | None:intergenic | 45.0% | |
| GAGCGTAGAATGACACAGAT+TGG | - | chr6_1:18048556-18048575 | Msa0877880:intron | 45.0% | |
| ATCTACTACGCCATCCTTCT+TGG | + | chr6_1:18048653-18048672 | None:intergenic | 45.0% | |
| ATGGACGGAGAGGTTTATGA+TGG | - | chr6_1:18048703-18048722 | Msa0877880:CDS | 45.0% | |
| TAATGATAAGAAGGGGGCAG+AGG | - | chr6_1:18049312-18049331 | Msa0877880:intron | 45.0% | |
| AATGATAAGAAGGGGGCAGA+GGG | - | chr6_1:18049313-18049332 | Msa0877880:intron | 45.0% | |
| ! | TTGTAGCACCTAAGTGGGTT+CGG | - | chr6_1:18049437-18049456 | Msa0877880:intron | 45.0% |
| ACAGTCTCTACTGTAGAAGG+GGG | - | chr6_1:18049534-18049553 | Msa0877880:intron | 45.0% | |
| AGAGTGAAACTCTCCTCCAA+GGG | + | chr6_1:18049562-18049581 | None:intergenic | 45.0% | |
| CCTGTTAGGAACACGGAAAT+TGG | + | chr6_1:18049629-18049648 | None:intergenic | 45.0% | |
| CCAATTTCCGTGTTCCTAAC+AGG | - | chr6_1:18049626-18049645 | Msa0877880:intron | 45.0% | |
| CTCAAAGCGTGGAACATCAA+TGG | + | chr6_1:18049709-18049728 | None:intergenic | 45.0% | |
| ! | TGTCGTTGGTGGAACATCAA+TGG | + | chr6_1:18049767-18049786 | None:intergenic | 45.0% |
| ACCTTCGCACAATGTGTAGT+CGG | + | chr6_1:18049845-18049864 | None:intergenic | 45.0% | |
| TGAATGAGGAGCAGTCAACA+TGG | - | chr6_1:18049951-18049970 | Msa0877880:CDS | 45.0% | |
| ACAGGATCAGACATAGCATC+AGG | - | chr6_1:18050347-18050366 | Msa0877880:intron | 45.0% | |
| CTATGTACTCCATCCACACA+GGG | + | chr6_1:18050373-18050392 | None:intergenic | 45.0% | |
| TTGTGAGGAAAGTCTACCAG+AGG | - | chr6_1:18050542-18050561 | Msa0877880:CDS | 45.0% | |
| TGTGAGGAAAGTCTACCAGA+GGG | - | chr6_1:18050543-18050562 | Msa0877880:CDS | 45.0% | |
| GGAACAGAAACTTGCCTTGT+GGG | + | chr6_1:18050859-18050878 | None:intergenic | 45.0% | |
| AGGAACAGAAACTTGCCTTG+TGG | + | chr6_1:18050860-18050879 | None:intergenic | 45.0% | |
| ! | CCTCTTTAGAGAGATTTCGG+AGG | + | chr6_1:18050949-18050968 | None:intergenic | 45.0% |
| ! | CCTCCGAAATCTCTCTAAAG+AGG | - | chr6_1:18050946-18050965 | Msa0877880:CDS | 45.0% |
| ! | AAACTTCAGCAGTTGGTACG+TGG | - | chr6_1:18051018-18051037 | Msa0877880:intron | 45.0% |
| ! | AACTTCAGCAGTTGGTACGT+GGG | - | chr6_1:18051019-18051038 | Msa0877880:intron | 45.0% |
| TCTGACAGGAAGAAATGCAG+TGG | - | chr6_1:18051298-18051317 | Msa0877880:CDS | 45.0% | |
| ACAGGAAGAAATGCAGTGGA+TGG | - | chr6_1:18051302-18051321 | Msa0877880:CDS | 45.0% | |
| AAGAAATGCAGTGGATGGCA+TGG | - | chr6_1:18051307-18051326 | Msa0877880:intron | 45.0% | |
| AACTCTCCCAAAAGCTTCAG+GGG | + | chr6_1:18051495-18051514 | None:intergenic | 45.0% | |
| CAACTCTCCCAAAAGCTTCA+GGG | + | chr6_1:18051496-18051515 | None:intergenic | 45.0% | |
| TCAACTCTCCCAAAAGCTTC+AGG | + | chr6_1:18051497-18051516 | None:intergenic | 45.0% | |
| TTAAACCCTGCCTCAACAGA+TGG | + | chr6_1:18052565-18052584 | None:intergenic | 45.0% | |
| CATTGTCACTGTCTCCCAAA+AGG | + | chr6_1:18052857-18052876 | None:intergenic | 45.0% | |
| AAATATACTGCTGCATGGCG+TGG | - | chr6_1:18052965-18052984 | Msa0877880:CDS | 45.0% | |
| !! | AGCTGCTAGGAAGTACTTTC+TGG | - | chr6_1:18053214-18053233 | Msa0877880:CDS | 45.0% |
| CAGCTCCATTACATGCATTC+GGG | - | chr6_1:18053629-18053648 | Msa0877880:intron | 45.0% | |
| AGCTCCATTACATGCATTCG+GGG | - | chr6_1:18053630-18053649 | Msa0877880:intron | 45.0% | |
| ! | TCCTCTAGAGGATTCAGTTG+AGG | - | chr6_1:18053910-18053929 | Msa0877880:intron | 45.0% |
| ACCTCAACTGAATCCTCTAG+AGG | + | chr6_1:18053914-18053933 | None:intergenic | 45.0% | |
| CTAGAGGATTCAGTTGAGGT+TGG | - | chr6_1:18053914-18053933 | Msa0877880:intron | 45.0% | |
| GGATCTTGCTAGCATGCTTA+AGG | - | chr6_1:18054274-18054293 | Msa0877880:intron | 45.0% | |
| !! | AAGGAAAGAAGCGTTTGGTG+AGG | - | chr6_1:18054687-18054706 | Msa0877880:intron | 45.0% |
| TACAAACTGGTACCTCTTGC+CGG | + | chr6_1:18054813-18054832 | None:intergenic | 45.0% | |
| AAAAATGCGACCAAAGCAGG+TGG | + | chr6_1:18055642-18055661 | None:intergenic | 45.0% | |
| GCTAAAAATGCGACCAAAGC+AGG | + | chr6_1:18055645-18055664 | None:intergenic | 45.0% | |
| GCAAACCTACCTTCAGTTGA+CGG | - | chr6_1:18055663-18055682 | Msa0877880:CDS | 45.0% | |
| TTTACAGAGCGACCTTCCAA+CGG | - | chr6_1:18056091-18056110 | Msa0877880:intron | 45.0% | |
| ! | GTTTTACCACTTTGTCCCGT+TGG | + | chr6_1:18056110-18056129 | None:intergenic | 45.0% |
| ACGGGACAAAGTGGTAAAAC+TGG | - | chr6_1:18056110-18056129 | Msa0877880:intron | 45.0% | |
| CCAGAAAGTTCACTTGTAGC+AGG | + | chr6_1:18056167-18056186 | None:intergenic | 45.0% | |
| CCTGCTACAAGTGAACTTTC+TGG | - | chr6_1:18056164-18056183 | Msa0877880:intron | 45.0% | |
| AAGTCTCACCCTGTTCAAAG+TGG | - | chr6_1:18056194-18056213 | Msa0877880:intron | 45.0% | |
| CAACCCGGTAGAAAGCAATA+CGG | - | chr6_1:18056230-18056249 | Msa0877880:intron | 45.0% | |
| AACCCGGTAGAAAGCAATAC+GGG | - | chr6_1:18056231-18056250 | Msa0877880:intron | 45.0% | |
| TTCCCGTATTGCTTTCTACC+GGG | + | chr6_1:18056236-18056255 | None:intergenic | 45.0% | |
| ATGTCCGTGTCAAACAGTGT+CGG | + | chr6_1:18056447-18056466 | None:intergenic | 45.0% | |
| !! | TTAGAAGCTATGAAGCACCG+CGG | + | chr6_1:18056553-18056572 | None:intergenic | 45.0% |
| !! | CTTTCTGGAACTGTCGTATC+CGG | + | chr6_1:18056817-18056836 | None:intergenic | 45.0% |
| ! | GCTCTTTCTGGCGATTTATC+CGG | - | chr6_1:18056884-18056903 | Msa0877880:CDS | 45.0% |
| ! | CTCTTTCTGGCGATTTATCC+GGG | - | chr6_1:18056885-18056904 | Msa0877880:CDS | 45.0% |
| !! | TATTAATAAAAAAAACAAAA+GGG | + | chr6_1:18047078-18047097 | None:intergenic | 5.0% |
| !! | TTATTAATAAAAAAAACAAA+AGG | + | chr6_1:18047079-18047098 | None:intergenic | 5.0% |
| !! | AAAATAGTTTAAATTATTAT+CGG | - | chr6_1:18055912-18055931 | Msa0877880:intron | 5.0% |
| ACTGCTTCCAAAACTTGGCC+TGG | + | chr6_1:18048334-18048353 | None:intergenic | 50.0% | |
| ! | GGAAACTTCCTCTAGGGGTA+TGG | - | chr6_1:18048684-18048703 | Msa0877880:CDS | 50.0% |
| ! | ACTTCCTCTAGGGGTATGGA+CGG | - | chr6_1:18048688-18048707 | Msa0877880:CDS | 50.0% |
| AACTGCAGTAGGCTTGCATC+GGG | + | chr6_1:18048896-18048915 | None:intergenic | 50.0% | |
| CAACTGCAGTAGGCTTGCAT+CGG | + | chr6_1:18048897-18048916 | None:intergenic | 50.0% | |
| TCACATGACCGAACCCACTT+AGG | + | chr6_1:18049448-18049467 | None:intergenic | 50.0% | |
| GAGAGTGAAACTCTCCTCCA+AGG | + | chr6_1:18049563-18049582 | None:intergenic | 50.0% | |
| AATGCAAAGGCGGACCTGTT+AGG | + | chr6_1:18049643-18049662 | None:intergenic | 50.0% | |
| ACAATGTGTAGTCGGCCACA+TGG | + | chr6_1:18049837-18049856 | None:intergenic | 50.0% | |
| AACCGGTCTGATTTAGGCAC+AGG | - | chr6_1:18050009-18050028 | Msa0877880:intron | 50.0% | |
| ACCGGTCTGATTTAGGCACA+GGG | - | chr6_1:18050010-18050029 | Msa0877880:intron | 50.0% | |
| TTTAGGCACAGGGGGCTATT+AGG | - | chr6_1:18050020-18050039 | Msa0877880:intron | 50.0% | |
| GCTATGTACTCCATCCACAC+AGG | + | chr6_1:18050374-18050393 | None:intergenic | 50.0% | |
| CACATCGGATGACTGTTGTG+AGG | - | chr6_1:18050527-18050546 | Msa0877880:CDS | 50.0% | |
| CGAGGGCAGTATACAGAGAA+CGG | - | chr6_1:18050778-18050797 | Msa0877880:intron | 50.0% | |
| TTGGAGCCTCTATGACTAGG+TGG | + | chr6_1:18051174-18051193 | None:intergenic | 50.0% | |
| !! | ATCGGTTTGGCTCAGGTTGA+GGG | + | chr6_1:18051463-18051482 | None:intergenic | 50.0% |
| ! | TAGCCACCCCTGAAGCTTTT+GGG | - | chr6_1:18051486-18051505 | Msa0877880:intron | 50.0% |
| GCTACATGGCATGCTAAAGC+TGG | - | chr6_1:18051972-18051991 | Msa0877880:intron | 50.0% | |
| TGAAGGCTCTTCCTGGTAAG+TGG | - | chr6_1:18052033-18052052 | Msa0877880:intron | 50.0% | |
| !! | AAGCAGAAGTGCCACTTACC+AGG | + | chr6_1:18052047-18052066 | None:intergenic | 50.0% |
| TTCTGCCATCTGTTGAGGCA+GGG | - | chr6_1:18052557-18052576 | Msa0877880:intron | 50.0% | |
| !! | CTGAAGGTGTTGAAGCTGCT+AGG | - | chr6_1:18053201-18053220 | Msa0877880:CDS | 50.0% |
| GCTCCATTACATGCATTCGG+GGG | - | chr6_1:18053631-18053650 | Msa0877880:intron | 50.0% | |
| CAACCCCCGAATGCATGTAA+TGG | + | chr6_1:18053637-18053656 | None:intergenic | 50.0% | |
| AGAAACAACCGGACGTAGCA+AGG | + | chr6_1:18054334-18054353 | None:intergenic | 50.0% | |
| ACAAACTGGTACCTCTTGCC+GGG | + | chr6_1:18054812-18054831 | None:intergenic | 50.0% | |
| GCGTGTTCCGTGTACATTTG+TGG | - | chr6_1:18055518-18055537 | Msa0877880:intron | 50.0% | |
| ACTTACCAATTCGCAGGGAC+AGG | - | chr6_1:18055573-18055592 | Msa0877880:intron | 50.0% | |
| GAAAGCTACACCACCTGCTT+TGG | - | chr6_1:18055629-18055648 | Msa0877880:intron | 50.0% | |
| TGCAGGTCCAACACCAAATG+TGG | - | chr6_1:18056049-18056068 | Msa0877880:intron | 50.0% | |
| TTACAGAGCGACCTTCCAAC+GGG | - | chr6_1:18056092-18056111 | Msa0877880:intron | 50.0% | |
| TACCACTTTGTCCCGTTGGA+AGG | + | chr6_1:18056106-18056125 | None:intergenic | 50.0% | |
| GGACCTACTGGCAATTGTGA+TGG | + | chr6_1:18056140-18056159 | None:intergenic | 50.0% | |
| AGTTCACTTGTAGCAGGTGC+AGG | + | chr6_1:18056161-18056180 | None:intergenic | 50.0% | |
| GGCTTATCTCACAAGCAACC+CGG | - | chr6_1:18056215-18056234 | Msa0877880:intron | 50.0% | |
| !! | GGTGCCGCTTTGTTACAAGT+TGG | + | chr6_1:18056426-18056445 | None:intergenic | 50.0% |
| !! | CTTGAGGAAGTGGTTGGCTT+TGG | + | chr6_1:18056787-18056806 | None:intergenic | 50.0% |
| AAGCGTCTTGAGGAAGTGGT+TGG | + | chr6_1:18056793-18056812 | None:intergenic | 50.0% | |
| CACTTCCTCAAGACGCTTTC+CGG | - | chr6_1:18056795-18056814 | Msa0877880:intron | 50.0% | |
| !! | TCCTGTTTGTGAAGTGCTGC+CGG | + | chr6_1:18056846-18056865 | None:intergenic | 50.0% |
| GTTATATCAACCGGTGCTCC+CGG | + | chr6_1:18056906-18056925 | None:intergenic | 50.0% | |
| ! | GCAGTATGTGGAGGCACACA+TGG | - | chr6_1:18048349-18048368 | Msa0877880:intron | 55.0% |
| ACTGTAGAAGGGGGATCCCT+TGG | - | chr6_1:18049543-18049562 | Msa0877880:intron | 55.0% | |
| AGGCGGACCTGTTAGGAACA+CGG | + | chr6_1:18049636-18049655 | None:intergenic | 55.0% | |
| ! | TTCCACGCTTTGAGCCCAAG+AGG | - | chr6_1:18049715-18049734 | Msa0877880:intron | 55.0% |
| GCCGACTACACATTGTGCGA+AGG | - | chr6_1:18049841-18049860 | Msa0877880:intron | 55.0% | |
| CCCCTGTGCCTAAATCAGAC+CGG | + | chr6_1:18050014-18050033 | None:intergenic | 55.0% | |
| CCGGTCTGATTTAGGCACAG+GGG | - | chr6_1:18050011-18050030 | Msa0877880:intron | 55.0% | |
| CGGTCTGATTTAGGCACAGG+GGG | - | chr6_1:18050012-18050031 | Msa0877880:intron | 55.0% | |
| ACATAGCATCAGGCCCTGTG+TGG | - | chr6_1:18050357-18050376 | Msa0877880:intron | 55.0% | |
| !! | ATGCTTGCTGTGCCACCAAC+TGG | - | chr6_1:18050831-18050850 | Msa0877880:intron | 55.0% |
| CTTGCCTTGTGGGATCCAGT+TGG | + | chr6_1:18050849-18050868 | None:intergenic | 55.0% | |
| !! | GATCGGTTTGGCTCAGGTTG+AGG | + | chr6_1:18051464-18051483 | None:intergenic | 55.0% |
| !! | GCTACAGATCGGTTTGGCTC+AGG | + | chr6_1:18051470-18051489 | None:intergenic | 55.0% |
| CTTCAGGGGTGGCTACAGAT+CGG | + | chr6_1:18051481-18051500 | None:intergenic | 55.0% | |
| ! | GTAGCCACCCCTGAAGCTTT+TGG | - | chr6_1:18051485-18051504 | Msa0877880:intron | 55.0% |
| TCTCCCAAAAGCTTCAGGGG+TGG | + | chr6_1:18051492-18051511 | None:intergenic | 55.0% | |
| ! | AGGTCTCTGAAGGCTCTTCC+TGG | - | chr6_1:18052026-18052045 | Msa0877880:intron | 55.0% |
| GGAATCCCGTGGAGCAATTC+AGG | - | chr6_1:18052275-18052294 | Msa0877880:intron | 55.0% | |
| CTGGGTTCTGCCATCTGTTG+AGG | - | chr6_1:18052552-18052571 | Msa0877880:intron | 55.0% | |
| GTTCTGCCATCTGTTGAGGC+AGG | - | chr6_1:18052556-18052575 | Msa0877880:intron | 55.0% | |
| CTATGTGGCTTACGCGTCAG+TGG | - | chr6_1:18053271-18053290 | Msa0877880:CDS | 55.0% | |
| GACCTTCCAACGGGACAAAG+TGG | - | chr6_1:18056101-18056120 | Msa0877880:intron | 55.0% | |
| !! | GGCACCGACACTGTTTGACA+CGG | - | chr6_1:18056440-18056459 | Msa0877880:intron | 55.0% |
| TCGTGTCAGAGTTGTGTCCG+CGG | - | chr6_1:18056533-18056552 | Msa0877880:intron | 55.0% | |
| !! | CGGAAAGCGTCTTGAGGAAG+TGG | + | chr6_1:18056797-18056816 | None:intergenic | 55.0% |
| !! | CGTATCCGGAAAGCGTCTTG+AGG | + | chr6_1:18056803-18056822 | None:intergenic | 55.0% |
| CAGTTCCAGAAAGCTCGAGC+CGG | - | chr6_1:18056824-18056843 | Msa0877880:intron | 55.0% | |
| CTGTTGGTCGGTCGCCAAGA+AGG | - | chr6_1:18048636-18048655 | Msa0877880:intron | 60.0% | |
| TGGTCGGTCGCCAAGAAGGA+TGG | - | chr6_1:18048640-18048659 | Msa0877880:intron | 60.0% | |
| CTCTCCGTCCATACCCCTAG+AGG | + | chr6_1:18048695-18048714 | None:intergenic | 60.0% | |
| ! | CTCTAGGGGTATGGACGGAG+AGG | - | chr6_1:18048693-18048712 | Msa0877880:CDS | 60.0% |
| GTAGAAGGGGGATCCCTTGG+AGG | - | chr6_1:18049546-18049565 | Msa0877880:intron | 60.0% | |
| AGCCTCTTGGGCTCAAAGCG+TGG | + | chr6_1:18049720-18049739 | None:intergenic | 60.0% | |
| CCACATGGATCAGTCGCTGC+CGG | + | chr6_1:18049822-18049841 | None:intergenic | 60.0% | |
| AGCATCAGGCCCTGTGTGGA+TGG | - | chr6_1:18050361-18050380 | Msa0877880:intron | 60.0% | |
| GCCACCAACTGGATCCCACA+AGG | - | chr6_1:18050842-18050861 | Msa0877880:intron | 60.0% | |
| GCCTTGTGGGATCCAGTTGG+TGG | + | chr6_1:18050846-18050865 | None:intergenic | 60.0% | |
| GGGGTGGCTACAGATCGGTT+TGG | + | chr6_1:18051476-18051495 | None:intergenic | 60.0% | |
| GCAGAGCTAGAGGAATCCCG+TGG | - | chr6_1:18052264-18052283 | Msa0877880:intron | 60.0% | |
| CAGCACCTGTCCCTGCGAAT+TGG | + | chr6_1:18055581-18055600 | None:intergenic | 60.0% | |
| GTAGCAGGTGCAGGACCTAC+TGG | + | chr6_1:18056152-18056171 | None:intergenic | 60.0% | |
| GCCGGCAGCACTTCACAAAC+AGG | - | chr6_1:18056842-18056861 | Msa0877880:CDS | 60.0% | |
| ! | GGCGATTTATCCGGGAGCAC+CGG | - | chr6_1:18056893-18056912 | Msa0877880:CDS | 60.0% |
| CCGGCAGCGACTGATCCATG+TGG | - | chr6_1:18049819-18049838 | Msa0877880:intron | 65.0% | |
| ! | TTCGCAGGGACAGGTGCTGC+TGG | - | chr6_1:18055582-18055601 | Msa0877880:intron | 65.0% |
| !! | TGCTGCCGGCTCGAGCTTTC+TGG | + | chr6_1:18056832-18056851 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 18046644 | 18057198 | 18046644 | ID=Msa0877880;Name=Msa0877880 |
| chr6_1 | mRNA | 18046644 | 18057198 | 18046644 | ID=Msa0877880-mRNA-1;Parent=Msa0877880;Name=Msa0877880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=175|0.86|0.91|0.95|1|1|24|279|780 |
| chr6_1 | exon | 18046644 | 18047086 | 18046644 | ID=Msa0877880-mRNA-1:exon:4928;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18047570 | 18047788 | 18047570 | ID=Msa0877880-mRNA-1:exon:4927;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18048158 | 18048253 | 18048158 | ID=Msa0877880-mRNA-1:exon:4926;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18048641 | 18048736 | 18048641 | ID=Msa0877880-mRNA-1:exon:4925;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18048810 | 18048873 | 18048810 | ID=Msa0877880-mRNA-1:exon:4924;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18049023 | 18049166 | 18049023 | ID=Msa0877880-mRNA-1:exon:4923;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18049547 | 18049606 | 18049547 | ID=Msa0877880-mRNA-1:exon:4922;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18049911 | 18050007 | 18049911 | ID=Msa0877880-mRNA-1:exon:4921;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18050298 | 18050362 | 18050298 | ID=Msa0877880-mRNA-1:exon:4920;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18050523 | 18050663 | 18050523 | ID=Msa0877880-mRNA-1:exon:4919;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18050943 | 18051011 | 18050943 | ID=Msa0877880-mRNA-1:exon:4918;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18051215 | 18051322 | 18051215 | ID=Msa0877880-mRNA-1:exon:4917;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18051546 | 18051604 | 18051546 | ID=Msa0877880-mRNA-1:exon:4916;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18051795 | 18051915 | 18051795 | ID=Msa0877880-mRNA-1:exon:4915;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18052145 | 18052208 | 18052145 | ID=Msa0877880-mRNA-1:exon:4914;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18052490 | 18052536 | 18052490 | ID=Msa0877880-mRNA-1:exon:4913;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18052946 | 18053107 | 18052946 | ID=Msa0877880-mRNA-1:exon:4912;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18053197 | 18053337 | 18053197 | ID=Msa0877880-mRNA-1:exon:4911;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18053430 | 18053491 | 18053430 | ID=Msa0877880-mRNA-1:exon:4910;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18054460 | 18054560 | 18054460 | ID=Msa0877880-mRNA-1:exon:4909;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18055398 | 18055507 | 18055398 | ID=Msa0877880-mRNA-1:exon:4908;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18055659 | 18055721 | 18055659 | ID=Msa0877880-mRNA-1:exon:4907;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18056836 | 18056922 | 18056836 | ID=Msa0877880-mRNA-1:exon:4906;Parent=Msa0877880-mRNA-1 |
| chr6_1 | exon | 18057021 | 18057198 | 18057021 | ID=Msa0877880-mRNA-1:exon:4905;Parent=Msa0877880-mRNA-1 |
| chr6_1 | five_prime_UTR | 18057024 | 18057198 | 18057024 | ID=Msa0877880-mRNA-1:five_prime_utr;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18057021 | 18057023 | 18057021 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18056836 | 18056922 | 18056836 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18055659 | 18055721 | 18055659 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18055398 | 18055507 | 18055398 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18054460 | 18054560 | 18054460 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18053430 | 18053491 | 18053430 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18053197 | 18053337 | 18053197 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18052946 | 18053107 | 18052946 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18052490 | 18052536 | 18052490 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18052145 | 18052208 | 18052145 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18051795 | 18051915 | 18051795 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18051546 | 18051604 | 18051546 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18051215 | 18051322 | 18051215 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18050943 | 18051011 | 18050943 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18050523 | 18050663 | 18050523 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18050298 | 18050362 | 18050298 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18049911 | 18050007 | 18049911 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18049547 | 18049606 | 18049547 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18049023 | 18049166 | 18049023 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18048810 | 18048873 | 18048810 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18048641 | 18048736 | 18048641 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18048158 | 18048253 | 18048158 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18047570 | 18047788 | 18047570 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | CDS | 18046923 | 18047086 | 18046923 | ID=Msa0877880-mRNA-1:cds;Parent=Msa0877880-mRNA-1 |
| chr6_1 | three_prime_UTR | 18046644 | 18046922 | 18046644 | ID=Msa0877880-mRNA-1:three_prime_utr;Parent=Msa0877880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
