Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194920 | sp|B3H672|PP317_ARATH | 48.193 | 166 | 80 | 2 | 10 | 171 | 135 | 298 | 8.91e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194920 | A0A072URA8 | 77.457 | 173 | 36 | 1 | 2 | 171 | 129 | 301 | 8.88e-82 | 264 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa1194920 | 0.816052 | 6.745997e-52 | -8.615850e-47 |
| Msa0012040 | Msa1194920 | 0.810313 | 1.226743e-50 | -8.615850e-47 |
| Msa0014710 | Msa1194920 | 0.827667 | 1.378252e-54 | -8.615850e-47 |
| Msa0017510 | Msa1194920 | 0.817377 | 3.404127e-52 | -8.615850e-47 |
| Msa0020930 | Msa1194920 | 0.800668 | 1.293897e-48 | -8.615850e-47 |
| Msa0028640 | Msa1194920 | 0.816739 | 4.735629e-52 | -8.615850e-47 |
| Msa0037700 | Msa1194920 | 0.805366 | 1.382114e-49 | -8.615850e-47 |
| Msa0040450 | Msa1194920 | 0.817749 | 2.805741e-52 | -8.615850e-47 |
| Msa0054480 | Msa1194920 | 0.811082 | 8.365243e-51 | -8.615850e-47 |
| Msa0073530 | Msa1194920 | 0.804330 | 2.275299e-49 | -8.615850e-47 |
| Msa0101810 | Msa1194920 | -0.801198 | 1.008423e-48 | -8.615850e-47 |
| Msa0114060 | Msa1194920 | 0.812805 | 3.523252e-51 | -8.615850e-47 |
| Msa0116770 | Msa1194920 | 0.804143 | 2.488149e-49 | -8.615850e-47 |
| Msa0607540 | Msa1194920 | 0.801493 | 8.773408e-49 | -8.615850e-47 |
| Msa0608620 | Msa1194920 | 0.804688 | 1.915446e-49 | -8.615850e-47 |
| Msa0610430 | Msa1194920 | 0.804631 | 1.968970e-49 | -8.615850e-47 |
| Msa0620960 | Msa1194920 | 0.802983 | 4.330522e-49 | -8.615850e-47 |
| Msa0621490 | Msa1194920 | 0.804883 | 1.744176e-49 | -8.615850e-47 |
| Msa0621590 | Msa1194920 | 0.814864 | 1.239567e-51 | -8.615850e-47 |
| Msa0623080 | Msa1194920 | 0.812704 | 3.707598e-51 | -8.615850e-47 |
| Msa0625720 | Msa1194920 | 0.810951 | 8.926895e-51 | -8.615850e-47 |
| Msa0638070 | Msa1194920 | 0.811357 | 7.290461e-51 | -8.615850e-47 |
| Msa0638280 | Msa1194920 | 0.827846 | 1.248548e-54 | -8.615850e-47 |
| Msa0638320 | Msa1194920 | 0.816213 | 6.210098e-52 | -8.615850e-47 |
| Msa0647830 | Msa1194920 | 0.802116 | 6.534466e-49 | -8.615850e-47 |
| Msa0648880 | Msa1194920 | 0.820869 | 5.459397e-53 | -8.615850e-47 |
| Msa0657610 | Msa1194920 | 0.820842 | 5.540450e-53 | -8.615850e-47 |
| Msa0657970 | Msa1194920 | 0.840499 | 8.381545e-58 | -8.615850e-47 |
| Msa0658570 | Msa1194920 | 0.824829 | 6.527855e-54 | -8.615850e-47 |
| Msa0661190 | Msa1194920 | -0.811292 | 7.532665e-51 | -8.615850e-47 |
| Msa0663240 | Msa1194920 | 0.818057 | 2.391113e-52 | -8.615850e-47 |
| Msa0663380 | Msa1194920 | 0.806343 | 8.611973e-50 | -8.615850e-47 |
| Msa0663390 | Msa1194920 | 0.814706 | 1.343705e-51 | -8.615850e-47 |
| Msa0669440 | Msa1194920 | 0.828098 | 1.085699e-54 | -8.615850e-47 |
| Msa0677270 | Msa1194920 | 0.815898 | 7.301982e-52 | -8.615850e-47 |
| Msa0688480 | Msa1194920 | 0.823212 | 1.564364e-53 | -8.615850e-47 |
| Msa0689800 | Msa1194920 | 0.802545 | 5.333343e-49 | -8.615850e-47 |
| Msa0691380 | Msa1194920 | 0.811481 | 6.851066e-51 | -8.615850e-47 |
| Msa0692230 | Msa1194920 | 0.848169 | 7.273884e-60 | -8.615850e-47 |
| Msa0693380 | Msa1194920 | 0.828880 | 7.027624e-55 | -8.615850e-47 |
| Msa0698360 | Msa1194920 | 0.800189 | 1.619906e-48 | -8.615850e-47 |
| Msa0701900 | Msa1194920 | 0.802284 | 6.034988e-49 | -8.615850e-47 |
| Msa0716840 | Msa1194920 | 0.818637 | 1.766284e-52 | -8.615850e-47 |
| Msa0723120 | Msa1194920 | 0.800983 | 1.115669e-48 | -8.615850e-47 |
| Msa0724210 | Msa1194920 | 0.811831 | 5.749329e-51 | -8.615850e-47 |
| Msa0739120 | Msa1194920 | 0.802342 | 5.870799e-49 | -8.615850e-47 |
| Msa0743720 | Msa1194920 | 0.820824 | 5.593504e-53 | -8.615850e-47 |
| Msa0744040 | Msa1194920 | 0.801944 | 7.088545e-49 | -8.615850e-47 |
| Msa0745790 | Msa1194920 | 0.818038 | 2.414578e-52 | -8.615850e-47 |
| Msa0756630 | Msa1194920 | -0.808791 | 2.603294e-50 | -8.615850e-47 |
| Msa0773840 | Msa1194920 | 0.812346 | 4.439801e-51 | -8.615850e-47 |
| Msa0787470 | Msa1194920 | 0.805388 | 1.367630e-49 | -8.615850e-47 |
| Msa0788710 | Msa1194920 | 0.813120 | 3.005517e-51 | -8.615850e-47 |
| Msa0790510 | Msa1194920 | 0.807710 | 4.425773e-50 | -8.615850e-47 |
| Msa0795680 | Msa1194920 | 0.806833 | 6.788325e-50 | -8.615850e-47 |
| Msa0795920 | Msa1194920 | 0.806351 | 8.579768e-50 | -8.615850e-47 |
| Msa0796700 | Msa1194920 | 0.802092 | 6.609300e-49 | -8.615850e-47 |
| Msa0816700 | Msa1194920 | 0.805089 | 1.579275e-49 | -8.615850e-47 |
| Msa0824680 | Msa1194920 | 0.809793 | 1.587265e-50 | -8.615850e-47 |
| Msa0829620 | Msa1194920 | 0.821850 | 3.242707e-53 | -8.615850e-47 |
| Msa0830530 | Msa1194920 | 0.811098 | 8.295271e-51 | -8.615850e-47 |
| Msa0136070 | Msa1194920 | 0.807056 | 6.090264e-50 | -8.615850e-47 |
| Msa0140390 | Msa1194920 | 0.812389 | 4.344553e-51 | -8.615850e-47 |
| Msa0140860 | Msa1194920 | 0.811049 | 8.504316e-51 | -8.615850e-47 |
| Msa0150820 | Msa1194920 | 0.801706 | 7.933193e-49 | -8.615850e-47 |
| Msa0157290 | Msa1194920 | 0.817705 | 2.871381e-52 | -8.615850e-47 |
| Msa0159930 | Msa1194920 | 0.803876 | 2.827757e-49 | -8.615850e-47 |
| Msa0160550 | Msa1194920 | 0.800368 | 1.489026e-48 | -8.615850e-47 |
| Msa0165210 | Msa1194920 | 0.814231 | 1.711924e-51 | -8.615850e-47 |
| Msa0165220 | Msa1194920 | 0.817117 | 3.894310e-52 | -8.615850e-47 |
| Msa0166870 | Msa1194920 | 0.802166 | 6.380914e-49 | -8.615850e-47 |
| Msa0173990 | Msa1194920 | 0.809448 | 1.883176e-50 | -8.615850e-47 |
| Msa0188830 | Msa1194920 | 0.818757 | 1.659035e-52 | -8.615850e-47 |
| Msa0191250 | Msa1194920 | 0.819343 | 1.220674e-52 | -8.615850e-47 |
| Msa0195000 | Msa1194920 | 0.801319 | 9.523427e-49 | -8.615850e-47 |
| Msa0197660 | Msa1194920 | 0.810052 | 1.396011e-50 | -8.615850e-47 |
| Msa0210450 | Msa1194920 | 0.812569 | 3.968437e-51 | -8.615850e-47 |
| Msa0212310 | Msa1194920 | 0.812263 | 4.629364e-51 | -8.615850e-47 |
| Msa0212990 | Msa1194920 | 0.810547 | 1.092045e-50 | -8.615850e-47 |
| Msa0215320 | Msa1194920 | -0.804368 | 2.233578e-49 | -8.615850e-47 |
| Msa0222890 | Msa1194920 | 0.812373 | 4.381374e-51 | -8.615850e-47 |
| Msa0223410 | Msa1194920 | -0.803634 | 3.175261e-49 | -8.615850e-47 |
| Msa0223690 | Msa1194920 | 0.803648 | 3.153937e-49 | -8.615850e-47 |
| Msa0226890 | Msa1194920 | 0.805837 | 1.100915e-49 | -8.615850e-47 |
| Msa0373930 | Msa1194920 | 0.826692 | 2.359199e-54 | -8.615850e-47 |
| Msa0379640 | Msa1194920 | 0.803193 | 3.917229e-49 | -8.615850e-47 |
| Msa0388960 | Msa1194920 | 0.806870 | 6.667521e-50 | -8.615850e-47 |
| Msa0389340 | Msa1194920 | 0.848520 | 5.818024e-60 | -8.615850e-47 |
| Msa0398380 | Msa1194920 | 0.812564 | 3.979863e-51 | -8.615850e-47 |
| Msa0398710 | Msa1194920 | 0.811412 | 7.092342e-51 | -8.615850e-47 |
| Msa0410650 | Msa1194920 | 0.802376 | 5.776492e-49 | -8.615850e-47 |
| Msa0412970 | Msa1194920 | 0.803946 | 2.735020e-49 | -8.615850e-47 |
| Msa0414230 | Msa1194920 | 0.802618 | 5.150543e-49 | -8.615850e-47 |
| Msa0417270 | Msa1194920 | 0.818351 | 2.050781e-52 | -8.615850e-47 |
| Msa0431060 | Msa1194920 | 0.819925 | 8.991785e-53 | -8.615850e-47 |
| Msa0432770 | Msa1194920 | 0.826917 | 2.084719e-54 | -8.615850e-47 |
| Msa0433640 | Msa1194920 | 0.831562 | 1.555514e-55 | -8.615850e-47 |
| Msa0442200 | Msa1194920 | 0.800661 | 1.297746e-48 | -8.615850e-47 |
| Msa0442850 | Msa1194920 | 0.807898 | 4.037007e-50 | -8.615850e-47 |
| Msa0443260 | Msa1194920 | 0.810342 | 1.209104e-50 | -8.615850e-47 |
| Msa0453330 | Msa1194920 | 0.811126 | 8.183557e-51 | -8.615850e-47 |
| Msa0466390 | Msa1194920 | 0.822844 | 1.906151e-53 | -8.615850e-47 |
| Msa0473240 | Msa1194920 | 0.802842 | 4.631101e-49 | -8.615850e-47 |
| Msa0480000 | Msa1194920 | 0.817348 | 3.454803e-52 | -8.615850e-47 |
| Msa0990960 | Msa1194920 | 0.802894 | 4.517018e-49 | -8.615850e-47 |
| Msa0992490 | Msa1194920 | -0.807865 | 4.101328e-50 | -8.615850e-47 |
| Msa1003620 | Msa1194920 | 0.815474 | 9.074704e-52 | -8.615850e-47 |
| Msa1014540 | Msa1194920 | 0.823059 | 1.698591e-53 | -8.615850e-47 |
| Msa1021540 | Msa1194920 | 0.803381 | 3.582788e-49 | -8.615850e-47 |
| Msa1037700 | Msa1194920 | -0.809450 | 1.880899e-50 | -8.615850e-47 |
| Msa1046460 | Msa1194920 | 0.812219 | 4.732741e-51 | -8.615850e-47 |
| Msa1075220 | Msa1194920 | -0.833932 | 4.014492e-56 | -8.615850e-47 |
| Msa1082500 | Msa1194920 | 0.856047 | 4.189936e-62 | -8.615850e-47 |
| Msa1085200 | Msa1194920 | 0.802244 | 6.151873e-49 | -8.615850e-47 |
| Msa1085300 | Msa1194920 | 0.812093 | 5.042343e-51 | -8.615850e-47 |
| Msa1098400 | Msa1194920 | 0.808166 | 3.539495e-50 | -8.615850e-47 |
| Msa1098420 | Msa1194920 | 0.812400 | 4.321756e-51 | -8.615850e-47 |
| Msa1102150 | Msa1194920 | 0.812614 | 3.880483e-51 | -8.615850e-47 |
| Msa1103980 | Msa1194920 | 0.801068 | 1.072035e-48 | -8.615850e-47 |
| Msa1104370 | Msa1194920 | 0.801293 | 9.640283e-49 | -8.615850e-47 |
| Msa0239800 | Msa1194920 | 0.810294 | 1.237918e-50 | -8.615850e-47 |
| Msa0243100 | Msa1194920 | 0.804091 | 2.551380e-49 | -8.615850e-47 |
| Msa0243710 | Msa1194920 | 0.801989 | 6.938923e-49 | -8.615850e-47 |
| Msa0244860 | Msa1194920 | 0.809787 | 1.592165e-50 | -8.615850e-47 |
| Msa0258760 | Msa1194920 | 0.801158 | 1.027567e-48 | -8.615850e-47 |
| Msa0265380 | Msa1194920 | 0.828248 | 9.991001e-55 | -8.615850e-47 |
| Msa0265520 | Msa1194920 | 0.803592 | 3.238650e-49 | -8.615850e-47 |
| Msa0270100 | Msa1194920 | 0.811797 | 5.847949e-51 | -8.615850e-47 |
| Msa0283450 | Msa1194920 | 0.815266 | 1.009450e-51 | -8.615850e-47 |
| Msa0283520 | Msa1194920 | 0.806613 | 7.556118e-50 | -8.615850e-47 |
| Msa0288100 | Msa1194920 | 0.813621 | 2.333464e-51 | -8.615850e-47 |
| Msa0303360 | Msa1194920 | 0.824855 | 6.438788e-54 | -8.615850e-47 |
| Msa0309770 | Msa1194920 | 0.806682 | 7.307715e-50 | -8.615850e-47 |
| Msa0311860 | Msa1194920 | 0.821696 | 3.519746e-53 | -8.615850e-47 |
| Msa0317510 | Msa1194920 | 0.812552 | 4.003770e-51 | -8.615850e-47 |
| Msa0318980 | Msa1194920 | 0.800161 | 1.641155e-48 | -8.615850e-47 |
| Msa0321860 | Msa1194920 | 0.815169 | 1.060893e-51 | -8.615850e-47 |
| Msa0323080 | Msa1194920 | 0.818470 | 1.927572e-52 | -8.615850e-47 |
| Msa0330340 | Msa1194920 | 0.812145 | 4.911604e-51 | -8.615850e-47 |
| Msa0332000 | Msa1194920 | 0.811239 | 7.733949e-51 | -8.615850e-47 |
| Msa0333030 | Msa1194920 | 0.801248 | 9.845704e-49 | -8.615850e-47 |
| Msa0333720 | Msa1194920 | -0.802323 | 5.923848e-49 | -8.615850e-47 |
| Msa0335040 | Msa1194920 | 0.815356 | 9.641069e-52 | -8.615850e-47 |
| Msa0338110 | Msa1194920 | 0.812085 | 5.062591e-51 | -8.615850e-47 |
| Msa0340450 | Msa1194920 | 0.820021 | 8.547021e-53 | -8.615850e-47 |
| Msa0344830 | Msa1194920 | 0.812853 | 3.440353e-51 | -8.615850e-47 |
| Msa0345970 | Msa1194920 | 0.803976 | 2.695247e-49 | -8.615850e-47 |
| Msa0350990 | Msa1194920 | 0.825378 | 4.842960e-54 | -8.615850e-47 |
| Msa0351030 | Msa1194920 | 0.833428 | 5.364864e-56 | -8.615850e-47 |
| Msa0351080 | Msa1194920 | 0.803295 | 3.731213e-49 | -8.615850e-47 |
| Msa0351100 | Msa1194920 | 0.808128 | 3.606204e-50 | -8.615850e-47 |
| Msa1115430 | Msa1194920 | 0.800919 | 1.149704e-48 | -8.615850e-47 |
| Msa1116130 | Msa1194920 | -0.842093 | 3.191207e-58 | -8.615850e-47 |
| Msa1121450 | Msa1194920 | -0.814383 | 1.584707e-51 | -8.615850e-47 |
| Msa1127650 | Msa1194920 | 0.801799 | 7.591250e-49 | -8.615850e-47 |
| Msa1131220 | Msa1194920 | 0.832233 | 1.062637e-55 | -8.615850e-47 |
| Msa1139000 | Msa1194920 | -0.813576 | 2.387224e-51 | -8.615850e-47 |
| Msa1151910 | Msa1194920 | 0.803088 | 4.118097e-49 | -8.615850e-47 |
| Msa1162550 | Msa1194920 | -0.830406 | 2.990787e-55 | -8.615850e-47 |
| Msa1179120 | Msa1194920 | 0.802566 | 5.279412e-49 | -8.615850e-47 |
| Msa1186060 | Msa1194920 | 0.817374 | 3.408931e-52 | -8.615850e-47 |
| Msa1186950 | Msa1194920 | -0.806826 | 6.812733e-50 | -8.615850e-47 |
| Msa1189430 | Msa1194920 | 0.803744 | 3.012006e-49 | -8.615850e-47 |
| Msa1194920 | Msa1195080 | 0.886512 | 3.205839e-72 | -8.615850e-47 |
| Msa1194920 | Msa1199220 | 0.816795 | 4.599758e-52 | -8.615850e-47 |
| Msa1194920 | Msa1203250 | 0.820895 | 5.386573e-53 | -8.615850e-47 |
| Msa1194920 | Msa1217860 | 0.807787 | 4.261819e-50 | -8.615850e-47 |
| Msa1194920 | Msa1228210 | 0.816779 | 4.638897e-52 | -8.615850e-47 |
| Msa1194920 | Msa1233500 | 0.825708 | 4.045737e-54 | -8.615850e-47 |
| Msa1194920 | Msa1233890 | 0.821098 | 4.836808e-53 | -8.615850e-47 |
| Msa1194920 | Msa1238930 | 0.822893 | 1.856021e-53 | -8.615850e-47 |
| Msa1194920 | Msa1244250 | 0.814660 | 1.375826e-51 | -8.615850e-47 |
| Msa1194920 | Msa1248540 | 0.802761 | 4.811520e-49 | -8.615850e-47 |
| Msa1194920 | Msa1248860 | 0.818942 | 1.506647e-52 | -8.615850e-47 |
| Msa1194920 | Msa1249490 | 0.814152 | 1.781855e-51 | -8.615850e-47 |
| Msa1194920 | Msa1250890 | 0.803911 | 2.780156e-49 | -8.615850e-47 |
| Msa1194920 | Msa1264020 | 0.816542 | 5.242165e-52 | -8.615850e-47 |
| Msa1194920 | Msa1267060 | 0.825013 | 5.908711e-54 | -8.615850e-47 |
| Msa1194920 | Msa1271300 | 0.816257 | 6.069076e-52 | -8.615850e-47 |
| Msa1194920 | Msa1279210 | 0.826041 | 3.372097e-54 | -8.615850e-47 |
| Msa1194920 | Msa1280420 | 0.824705 | 6.983442e-54 | -8.615850e-47 |
| Msa1194920 | Msa1282580 | -0.803346 | 3.641623e-49 | -8.615850e-47 |
| Msa1194920 | Msa1283860 | 0.829592 | 4.723742e-55 | -8.615850e-47 |
| Msa1194920 | Msa1284220 | 0.818963 | 1.489783e-52 | -8.615850e-47 |
| Msa1194920 | Msa1284680 | 0.816731 | 4.753166e-52 | -8.615850e-47 |
| Msa1194920 | Msa1298260 | 0.812229 | 4.709115e-51 | -8.615850e-47 |
| Msa1194920 | Msa1305190 | 0.809408 | 1.920290e-50 | -8.615850e-47 |
| Msa1194920 | Msa1305340 | 0.819769 | 9.759251e-53 | -8.615850e-47 |
| Msa1194920 | Msa1306840 | 0.800609 | 1.329764e-48 | -8.615850e-47 |
| Msa1194920 | Msa1306850 | 0.807349 | 5.280019e-50 | -8.615850e-47 |
| Msa1194920 | Msa1308380 | 0.830350 | 3.086443e-55 | -8.615850e-47 |
| Msa1194920 | Msa1313150 | 0.800349 | 1.502452e-48 | -8.615850e-47 |
| Msa1194920 | Msa1314170 | 0.801882 | 7.300655e-49 | -8.615850e-47 |
| Msa1194920 | Msa1319650 | 0.801604 | 8.326114e-49 | -8.615850e-47 |
| Msa1194920 | Msa1320740 | 0.802500 | 5.446594e-49 | -8.615850e-47 |
| Msa1194920 | Msa1322890 | 0.805328 | 1.407363e-49 | -8.615850e-47 |
| Msa1194920 | Msa1336490 | 0.810216 | 1.287187e-50 | -8.615850e-47 |
| Msa1194920 | Msa1351620 | 0.834302 | 3.241788e-56 | -8.615850e-47 |
| Msa1194920 | Msa1351730 | 0.803469 | 3.435007e-49 | -8.615850e-47 |
| Msa1194920 | Msa1357530 | 0.816544 | 5.235814e-52 | -8.615850e-47 |
| Msa1194920 | Msa1367080 | 0.811983 | 5.327453e-51 | -8.615850e-47 |
| Msa1194920 | Msa1371430 | 0.820434 | 6.873812e-53 | -8.615850e-47 |
| Msa1194920 | Msa1376890 | 0.823213 | 1.563301e-53 | -8.615850e-47 |
| Msa1194920 | Msa1378760 | 0.804771 | 1.840965e-49 | -8.615850e-47 |
| Msa1194920 | Msa1384350 | 0.845849 | 3.141983e-59 | -8.615850e-47 |
| Msa1194920 | Msa1390050 | 0.807751 | 4.338308e-50 | -8.615850e-47 |
| Msa1194920 | Msa1392260 | 0.819649 | 1.039555e-52 | -8.615850e-47 |
| Msa1194920 | Msa1401530 | 0.814894 | 1.221294e-51 | -8.615850e-47 |
| Msa1194920 | Msa1403480 | 0.806134 | 9.533310e-50 | -8.615850e-47 |
| Msa1194920 | Msa1404520 | 0.814009 | 1.915733e-51 | -8.615850e-47 |
| Msa1194920 | Msa1409870 | 0.811878 | 5.616089e-51 | -8.615850e-47 |
| Msa1194920 | Msa1411020 | 0.813554 | 2.413364e-51 | -8.615850e-47 |
| Msa1194920 | Msa1415640 | 0.834260 | 3.321290e-56 | -8.615850e-47 |
| Msa1194920 | Msa1416150 | 0.805789 | 1.126392e-49 | -8.615850e-47 |
| Msa1194920 | Msa1420490 | 0.802502 | 5.443326e-49 | -8.615850e-47 |
| Msa1194920 | Msa1423390 | 0.803811 | 2.917592e-49 | -8.615850e-47 |
| Msa1194920 | Msa1423880 | 0.815962 | 7.064229e-52 | -8.615850e-47 |
| Msa1194920 | Msa1424290 | 0.810736 | 9.936475e-51 | -8.615850e-47 |
| Msa1194920 | Msa1426000 | 0.813181 | 2.914729e-51 | -8.615850e-47 |
| Msa1194920 | Msa1429150 | 0.800957 | 1.129207e-48 | -8.615850e-47 |
| Msa1194920 | Msa1429900 | 0.814969 | 1.174868e-51 | -8.615850e-47 |
| Msa1194920 | Msa1430680 | 0.812452 | 4.210110e-51 | -8.615850e-47 |
| Msa1194920 | Msa1434350 | 0.807951 | 3.932167e-50 | -8.615850e-47 |
| Msa1194920 | Msa1439320 | 0.810198 | 1.298898e-50 | -8.615850e-47 |
| Msa1194920 | Msa1440370 | 0.802156 | 6.411571e-49 | -8.615850e-47 |
| Msa1194920 | Msa1440810 | 0.802876 | 4.556326e-49 | -8.615850e-47 |
| Msa1194920 | Msa1440910 | 0.804104 | 2.535019e-49 | -8.615850e-47 |
| Msa1194920 | Msa1445080 | 0.808487 | 3.024071e-50 | -8.615850e-47 |
| Msa1194920 | Msa1451620 | -0.810235 | 1.274659e-50 | -8.615850e-47 |
| Msa1194920 | Msa1454120 | 0.857909 | 1.183561e-62 | -8.615850e-47 |
| Msa1194920 | Msa1455490 | 0.810958 | 8.898857e-51 | -8.615850e-47 |
| Msa0484780 | Msa1194920 | 0.829471 | 5.052724e-55 | -8.615850e-47 |
| Msa0488560 | Msa1194920 | 0.805970 | 1.032054e-49 | -8.615850e-47 |
| Msa0500360 | Msa1194920 | 0.810796 | 9.646102e-51 | -8.615850e-47 |
| Msa0507680 | Msa1194920 | 0.808187 | 3.503879e-50 | -8.615850e-47 |
| Msa0515010 | Msa1194920 | 0.838643 | 2.546015e-57 | -8.615850e-47 |
| Msa0520750 | Msa1194920 | 0.818632 | 1.771441e-52 | -8.615850e-47 |
| Msa0521540 | Msa1194920 | 0.823550 | 1.303805e-53 | -8.615850e-47 |
| Msa0529890 | Msa1194920 | 0.808472 | 3.045106e-50 | -8.615850e-47 |
| Msa0533070 | Msa1194920 | 0.805510 | 1.289179e-49 | -8.615850e-47 |
| Msa0553460 | Msa1194920 | 0.816480 | 5.412911e-52 | -8.615850e-47 |
| Msa0555020 | Msa1194920 | 0.818101 | 2.336325e-52 | -8.615850e-47 |
| Msa0558690 | Msa1194920 | 0.819004 | 1.458072e-52 | -8.615850e-47 |
| Msa0562440 | Msa1194920 | 0.806001 | 1.016599e-49 | -8.615850e-47 |
| Msa0567020 | Msa1194920 | 0.809345 | 1.981025e-50 | -8.615850e-47 |
| Msa0577500 | Msa1194920 | 0.801912 | 7.199064e-49 | -8.615850e-47 |
| Msa0580420 | Msa1194920 | 0.821126 | 4.764982e-53 | -8.615850e-47 |
| Msa0585560 | Msa1194920 | 0.804236 | 2.380453e-49 | -8.615850e-47 |
| Msa0593650 | Msa1194920 | 0.823714 | 1.193936e-53 | -8.615850e-47 |
| Msa0602250 | Msa1194920 | 0.803469 | 3.434771e-49 | -8.615850e-47 |
| Msa0867890 | Msa1194920 | 0.831234 | 1.873432e-55 | -8.615850e-47 |
| Msa0877880 | Msa1194920 | 0.806916 | 6.521350e-50 | -8.615850e-47 |
| Msa0880140 | Msa1194920 | 0.814287 | 1.663734e-51 | -8.615850e-47 |
| Msa0896750 | Msa1194920 | 0.808217 | 3.451513e-50 | -8.615850e-47 |
| Msa0907070 | Msa1194920 | 0.803295 | 3.731877e-49 | -8.615850e-47 |
| Msa0925250 | Msa1194920 | 0.800622 | 1.321861e-48 | -8.615850e-47 |
| Msa0925290 | Msa1194920 | 0.802355 | 5.835695e-49 | -8.615850e-47 |
| Msa0930390 | Msa1194920 | 0.810397 | 1.176583e-50 | -8.615850e-47 |
| Msa0938220 | Msa1194920 | 0.818343 | 2.059896e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194920 | MtrunA17_Chr4g0055401 | 77.457 | 173 | 36 | 1 | 2 | 171 | 129 | 301 | 1.71e-85 | 264 |
| Msa1194920 | MtrunA17_Chr4g0042181 | 27.607 | 163 | 114 | 2 | 13 | 171 | 170 | 332 | 3.90e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194920 | AT4G17616.1 | 48.193 | 166 | 80 | 2 | 10 | 171 | 135 | 298 | 9.05e-38 | 137 |
| Msa1194920 | AT1G03100.1 | 27.108 | 166 | 117 | 2 | 10 | 171 | 177 | 342 | 2.36e-12 | 64.7 |
Find 73 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTGTGAAGACAGTAAT+TGG | 0.189776 | 8_1:+42455424 | Msa1194920:CDS |
| TTCTACATCTGAATTTAAAT+TGG | 0.221172 | 8_1:-42453732 | None:intergenic |
| TTGCGGATTTATAACATTAA+AGG | 0.223732 | 8_1:+42453437 | Msa1194920:five_prime_UTR |
| TGTGGAAATTACTTGATATT+GGG | 0.256264 | 8_1:+42453678 | Msa1194920:five_prime_UTR |
| ATGTGGAAATTACTTGATAT+TGG | 0.266059 | 8_1:+42453677 | Msa1194920:five_prime_UTR |
| TAGTAGTTTGAGGGATAAAA+AGG | 0.266433 | 8_1:+42455492 | Msa1194920:CDS |
| GTCATTCTACCATCTAGTTT+TGG | 0.285650 | 8_1:+42453622 | Msa1194920:five_prime_UTR |
| TGATCCATGTAATTTATCTT+TGG | 0.299624 | 8_1:+42455303 | Msa1194920:CDS |
| ACTACAATTAATCTTCATAT+TGG | 0.315911 | 8_1:-42453372 | None:intergenic |
| GGAGGCAGTTAATTCGTCTA+TGG | 0.339461 | 8_1:+42453834 | Msa1194920:exon |
| TCACACAAGCATCAAGAAAA+AGG | 0.343795 | 8_1:-42455558 | None:intergenic |
| AACCTAGGTATAACTGTTGC+AGG | 0.355838 | 8_1:-42455346 | None:intergenic |
| TTGCCGCAAGTTTGATTCAA+TGG | 0.373385 | 8_1:+42453394 | Msa1194920:five_prime_UTR |
| TTTCTAAATGAGTATCTTGA+AGG | 0.382168 | 8_1:+42453239 | Msa1194920:five_prime_UTR |
| AGGTTAAATATCAAAGTATC+TGG | 0.384496 | 8_1:-42455538 | None:intergenic |
| ATCATCATTGATCACTGAAA+TGG | 0.387294 | 8_1:-42453564 | None:intergenic |
| CTTGACTTTCCAAAACTAGA+TGG | 0.402774 | 8_1:-42453631 | None:intergenic |
| TAAATATTAGTGAAACATTA+CGG | 0.422498 | 8_1:+42453177 | Msa1194920:five_prime_UTR |
| GATGGCACAAACCCTTTGTT+AGG | 0.426964 | 8_1:-42455373 | None:intergenic |
| TGAGCACATGCCTAGGGGTA+TGG | 0.429091 | 8_1:+42453526 | Msa1194920:five_prime_UTR |
| TGTTTGTACTCTCAATCCTT+TGG | 0.442113 | 8_1:-42453016 | None:intergenic |
| TGCCGCAAGTTTGATTCAAT+GGG | 0.448344 | 8_1:+42453395 | Msa1194920:five_prime_UTR |
| TGTACTCTCAATCCTTTGGC+AGG | 0.451258 | 8_1:-42453012 | None:intergenic |
| TTCTTTGTAGTCATGCTTTG+CGG | 0.453705 | 8_1:+42453420 | Msa1194920:five_prime_UTR |
| AATGAGTATCTTGAAGGAAC+AGG | 0.455830 | 8_1:+42453245 | Msa1194920:five_prime_UTR |
| TTGCAGATTTCGGATATGAA+TGG | 0.468630 | 8_1:+42455670 | Msa1194920:CDS |
| GAATTGAAATGTCATATTGA+TGG | 0.474600 | 8_1:+42455712 | Msa1194920:CDS |
| TAACAAGAGGAGGTGTACTT+TGG | 0.474858 | 8_1:-42453154 | None:intergenic |
| AGCAAGAATGTATTCTCTGC+TGG | 0.493952 | 8_1:+42452981 | None:intergenic |
| AACATTACGGCATGCATCTA+CGG | 0.494329 | 8_1:+42453190 | Msa1194920:five_prime_UTR |
| GAGCACATGCCTAGGGGTAT+GGG | 0.504100 | 8_1:+42453527 | Msa1194920:five_prime_UTR |
| TTAGCCAAAGATAAATTACA+TGG | 0.509347 | 8_1:-42455307 | None:intergenic |
| TGATTTATGAGCACATGCCT+AGG | 0.520789 | 8_1:+42453519 | Msa1194920:five_prime_UTR |
| AAGAAGCTCAAAATATTATG+TGG | 0.525327 | 8_1:+42453660 | Msa1194920:five_prime_UTR |
| CTAGGTTGATGCCTAACAAA+GGG | 0.525508 | 8_1:+42455362 | Msa1194920:CDS |
| GACAAATGTCAATGAAAATG+AGG | 0.525546 | 8_1:+42453763 | Msa1194920:five_prime_UTR |
| GTGGCGCCGCATAGAGGTTG+AGG | 0.528015 | 8_1:+42453115 | Msa1194920:five_prime_UTR |
| ATTGAGTTAATGCTGCTGAT+GGG | 0.530195 | 8_1:+42455613 | Msa1194920:CDS |
| GGAAACATGCTTCAGACCAT+TGG | 0.541782 | 8_1:+42453784 | Msa1194920:five_prime_UTR |
| GATTTATGAGCACATGCCTA+GGG | 0.541821 | 8_1:+42453520 | Msa1194920:five_prime_UTR |
| ACTTGATATTGGGGCTGAGA+GGG | 0.547189 | 8_1:+42453688 | Msa1194920:five_prime_UTR |
| GTGGAAATTACTTGATATTG+GGG | 0.556011 | 8_1:+42453679 | Msa1194920:five_prime_UTR |
| TCACTAATATTTATAACAAG+AGG | 0.557518 | 8_1:-42453167 | None:intergenic |
| GATTGAGTTAATGCTGCTGA+TGG | 0.559562 | 8_1:+42455612 | Msa1194920:CDS |
| AGCATTGCGATAAAGAATAC+CGG | 0.559831 | 8_1:-42453591 | None:intergenic |
| AATATATCAATTCAGACCAA+TGG | 0.559963 | 8_1:-42453800 | None:intergenic |
| GGTATAACTGTTGCAGGAGA+CGG | 0.562251 | 8_1:-42455340 | None:intergenic |
| GAGGCAGTTAATTCGTCTAT+GGG | 0.565783 | 8_1:+42453835 | Msa1194920:exon |
| TGGTTTGAGAGATGAAATGA+TGG | 0.567404 | 8_1:+42455690 | Msa1194920:CDS |
| GAGAGGGTGCGAAAAGGTGT+TGG | 0.567841 | 8_1:+42453704 | Msa1194920:five_prime_UTR |
| GGGGCTGAGAGGGTGCGAAA+AGG | 0.580980 | 8_1:+42453698 | Msa1194920:five_prime_UTR |
| TACTTGATATTGGGGCTGAG+AGG | 0.584455 | 8_1:+42453687 | Msa1194920:five_prime_UTR |
| GAGTATCTTGAAGGAACAGG+TGG | 0.588038 | 8_1:+42453248 | Msa1194920:five_prime_UTR |
| GGTGCGAAAAGGTGTTGGCA+AGG | 0.590379 | 8_1:+42453709 | Msa1194920:five_prime_UTR |
| AAATTCAGATGTAGAAACAA+TGG | 0.596835 | 8_1:+42453739 | Msa1194920:five_prime_UTR |
| TGAGAGTACAAACAATGTGT+TGG | 0.597259 | 8_1:+42453025 | Msa1194920:five_prime_UTR |
| CTAATATTTATAACAAGAGG+AGG | 0.599669 | 8_1:-42453164 | None:intergenic |
| ATCATTGATCACTGAAATGG+AGG | 0.600594 | 8_1:-42453561 | None:intergenic |
| GAATCTTCTCCCATACCCCT+AGG | 0.605803 | 8_1:-42453536 | None:intergenic |
| TGCCCATTGAATCAAACTTG+CGG | 0.606774 | 8_1:-42453397 | None:intergenic |
| CCTAGGTTGATGCCTAACAA+AGG | 0.608082 | 8_1:+42455361 | Msa1194920:CDS |
| GGACAGTAGCTGATGCACAC+TGG | 0.613720 | 8_1:+42455635 | Msa1194920:CDS |
| TTGAGTTAATGCTGCTGATG+GGG | 0.623949 | 8_1:+42455614 | Msa1194920:CDS |
| GTGATCAATGATGATGATGC+CGG | 0.629234 | 8_1:+42453572 | Msa1194920:five_prime_UTR |
| AGGCATGTGCTCATAAATCA+CGG | 0.631426 | 8_1:-42453516 | None:intergenic |
| CCTTTGTTAGGCATCAACCT+AGG | 0.631816 | 8_1:-42455361 | None:intergenic |
| CTGGTATCAAGTCCTGCCAA+AGG | 0.634306 | 8_1:+42453000 | Msa1194920:five_prime_UTR |
| ATAAATTACATGGATCAACA+TGG | 0.663527 | 8_1:-42455297 | None:intergenic |
| CTCCTGCAACAGTTATACCT+AGG | 0.666500 | 8_1:+42455344 | Msa1194920:CDS |
| GCGCCGCATAGAGGTTGAGG+AGG | 0.668856 | 8_1:+42453118 | Msa1194920:five_prime_UTR |
| AGCATTAACTCAATCAGACA+CGG | 0.698370 | 8_1:-42455604 | None:intergenic |
| ATTTATGAGCACATGCCTAG+GGG | 0.718468 | 8_1:+42453521 | Msa1194920:five_prime_UTR |
| ATTCCTCCTCAACCTCTATG+CGG | 0.727553 | 8_1:-42453121 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTAGTGAAACATTA+CGG | + | chr8_1:42453177-42453196 | Msa1194920:five_prime_UTR | 15.0% |
| !!! | TGATATATTGTAAGTTTTAT+TGG | + | chr8_1:42453936-42453955 | Msa1194920:intron | 15.0% |
| !!! | ATAATCTTTTTGGAAATATT+TGG | + | chr8_1:42454685-42454704 | Msa1194920:intron | 15.0% |
| !! | TGAAATTTGAAGAAAAATTA+TGG | - | chr8_1:42455209-42455228 | None:intergenic | 15.0% |
| !! | TCACTAATATTTATAACAAG+AGG | - | chr8_1:42453170-42453189 | None:intergenic | 20.0% |
| !!! | CATATTTTTTATTAGGCTTA+TGG | - | chr8_1:42453334-42453353 | None:intergenic | 20.0% |
| !! | TAAGCCTAATAAAAAATATG+TGG | + | chr8_1:42453334-42453353 | Msa1194920:five_prime_UTR | 20.0% |
| !! | ACTACAATTAATCTTCATAT+TGG | - | chr8_1:42453375-42453394 | None:intergenic | 20.0% |
| !! | TTCTACATCTGAATTTAAAT+TGG | - | chr8_1:42453735-42453754 | None:intergenic | 20.0% |
| !! | AAAATAAGCATAAACAACTT+AGG | - | chr8_1:42453898-42453917 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTATCCTTTGAT+AGG | + | chr8_1:42453995-42454014 | Msa1194920:intron | 20.0% |
| !! | TTAAGTCACTATATAGATAA+TGG | + | chr8_1:42454093-42454112 | Msa1194920:intron | 20.0% |
| !! | AATGAAAAATGATAATTCCA+AGG | - | chr8_1:42454499-42454518 | None:intergenic | 20.0% |
| !!! | TTTGAAATTCACCTTTTTAA+GGG | + | chr8_1:42454772-42454791 | Msa1194920:intron | 20.0% |
| !! | AAATTCCAATAATTGAGAAA+GGG | - | chr8_1:42455168-42455187 | None:intergenic | 20.0% |
| !! | AAAATTCCAATAATTGAGAA+AGG | - | chr8_1:42455169-42455188 | None:intergenic | 20.0% |
| !!! | TGATTTTAATAGTAGTTTGA+GGG | + | chr8_1:42455483-42455502 | Msa1194920:CDS | 20.0% |
| ! | CTAATATTTATAACAAGAGG+AGG | - | chr8_1:42453167-42453186 | None:intergenic | 25.0% |
| ! | TTTCTAAATGAGTATCTTGA+AGG | + | chr8_1:42453239-42453258 | Msa1194920:five_prime_UTR | 25.0% |
| !!! | GTCACCACATATTTTTTATT+AGG | - | chr8_1:42453341-42453360 | None:intergenic | 25.0% |
| ! | TTGCGGATTTATAACATTAA+AGG | + | chr8_1:42453437-42453456 | Msa1194920:five_prime_UTR | 25.0% |
| ! | ACCAATACTTCTTAAAAAGA+TGG | + | chr8_1:42453477-42453496 | Msa1194920:five_prime_UTR | 25.0% |
| !!! | ACCATCTTTTTAAGAAGTAT+TGG | - | chr8_1:42453481-42453500 | None:intergenic | 25.0% |
| ! | AAGAAGCTCAAAATATTATG+TGG | + | chr8_1:42453660-42453679 | Msa1194920:five_prime_UTR | 25.0% |
| ! | ATGTGGAAATTACTTGATAT+TGG | + | chr8_1:42453677-42453696 | Msa1194920:five_prime_UTR | 25.0% |
| ! | TGTGGAAATTACTTGATATT+GGG | + | chr8_1:42453678-42453697 | Msa1194920:five_prime_UTR | 25.0% |
| ! | AAATTCAGATGTAGAAACAA+TGG | + | chr8_1:42453739-42453758 | Msa1194920:five_prime_UTR | 25.0% |
| ! | AATATATCAATTCAGACCAA+TGG | - | chr8_1:42453803-42453822 | None:intergenic | 25.0% |
| !!! | TTGATATATTTTTGCAACAG+AGG | + | chr8_1:42453813-42453832 | Msa1194920:five_prime_UTR | 25.0% |
| ! | ACTTACAATATATCAACATG+CGG | - | chr8_1:42453931-42453950 | None:intergenic | 25.0% |
| ! | GTTATTGAATAGAATAGCAA+TGG | - | chr8_1:42454043-42454062 | None:intergenic | 25.0% |
| ! | AGAGATCTTAAAATTACTGT+TGG | + | chr8_1:42454163-42454182 | Msa1194920:intron | 25.0% |
| !! | GGAAGTTTGAAATTATATGA+TGG | + | chr8_1:42454239-42454258 | Msa1194920:intron | 25.0% |
| !! | TTGTTCTATATTTGTTGCTT+AGG | + | chr8_1:42454275-42454294 | Msa1194920:intron | 25.0% |
| ! | TTTAACAAGAAAAGCTCAAA+TGG | + | chr8_1:42454465-42454484 | Msa1194920:intron | 25.0% |
| !! | TCATAATGGCATAATCTTTT+TGG | + | chr8_1:42454675-42454694 | Msa1194920:intron | 25.0% |
| !!! | GTTTGAAATTCACCTTTTTA+AGG | + | chr8_1:42454771-42454790 | Msa1194920:intron | 25.0% |
| !!! | TTGAAATTCACCTTTTTAAG+GGG | + | chr8_1:42454773-42454792 | Msa1194920:intron | 25.0% |
| !!! | TTAATGTGAAATTTTGACCT+TGG | + | chr8_1:42454937-42454956 | Msa1194920:intron | 25.0% |
| ! | ATACTAAAATTCAAATGCCA+AGG | - | chr8_1:42454957-42454976 | None:intergenic | 25.0% |
| !!! | TTGGCATTTGAATTTTAGTA+TGG | + | chr8_1:42454956-42454975 | Msa1194920:intron | 25.0% |
| ! | AAAGAATATTAAGTCGGAAT+GGG | + | chr8_1:42455011-42455030 | Msa1194920:intron | 25.0% |
| ! | CATTATACATTCATCATCTA+AGG | + | chr8_1:42455036-42455055 | Msa1194920:intron | 25.0% |
| !! | TCAAATTTCAAATCGTGTTT+TGG | + | chr8_1:42455219-42455238 | Msa1194920:intron | 25.0% |
| ! | AAAATTGTTGAAGAGAATTC+AGG | + | chr8_1:42455268-42455287 | Msa1194920:intron | 25.0% |
| ! | ATAAATTACATGGATCAACA+TGG | - | chr8_1:42455300-42455319 | None:intergenic | 25.0% |
| ! | TGATCCATGTAATTTATCTT+TGG | + | chr8_1:42455303-42455322 | Msa1194920:CDS | 25.0% |
| ! | TTAGCCAAAGATAAATTACA+TGG | - | chr8_1:42455310-42455329 | None:intergenic | 25.0% |
| ! | CACAATATGAAAAACAATCA+AGG | - | chr8_1:42455413-42455432 | None:intergenic | 25.0% |
| !!! | GTGATTTTAATAGTAGTTTG+AGG | + | chr8_1:42455482-42455501 | Msa1194920:CDS | 25.0% |
| !! | AGGTTAAATATCAAAGTATC+TGG | - | chr8_1:42455541-42455560 | None:intergenic | 25.0% |
| !! | TGTGATAATTTTGCAGATTT+CGG | + | chr8_1:42455660-42455679 | Msa1194920:CDS | 25.0% |
| ! | GAATTGAAATGTCATATTGA+TGG | + | chr8_1:42455712-42455731 | Msa1194920:CDS | 25.0% |
| TTGAGAAGATGTTGAAAAAG+TGG | + | chr8_1:42453096-42453115 | Msa1194920:five_prime_UTR | 30.0% | |
| !!! | CTTTTTAAGAAGTATTGGTC+AGG | - | chr8_1:42453476-42453495 | None:intergenic | 30.0% |
| AAAGATGGTCAAAAAATGCA+AGG | + | chr8_1:42453492-42453511 | Msa1194920:five_prime_UTR | 30.0% | |
| ATCATCATTGATCACTGAAA+TGG | - | chr8_1:42453567-42453586 | None:intergenic | 30.0% | |
| GTGGAAATTACTTGATATTG+GGG | + | chr8_1:42453679-42453698 | Msa1194920:five_prime_UTR | 30.0% | |
| GACAAATGTCAATGAAAATG+AGG | + | chr8_1:42453763-42453782 | Msa1194920:five_prime_UTR | 30.0% | |
| !! | ATATATTTTTGCAACAGAGG+AGG | + | chr8_1:42453816-42453835 | Msa1194920:five_prime_UTR | 30.0% |
| ATAAGCATAAACAACTTAGG+AGG | - | chr8_1:42453895-42453914 | None:intergenic | 30.0% | |
| AAGGATGATATTCCTATCAA+AGG | - | chr8_1:42454010-42454029 | None:intergenic | 30.0% | |
| ATTGAATAGAATAGCAATGG+TGG | - | chr8_1:42454040-42454059 | None:intergenic | 30.0% | |
| ACAAAACTCTGAACATCTAT+TGG | - | chr8_1:42454375-42454394 | None:intergenic | 30.0% | |
| AGTATGTAATGATAACTTCG+AGG | - | chr8_1:42454558-42454577 | None:intergenic | 30.0% | |
| ACATTGCATATTATATGCAG+AGG | - | chr8_1:42454831-42454850 | None:intergenic | 30.0% | |
| CTAGCCAAAGAATATTAAGT+CGG | + | chr8_1:42455005-42455024 | Msa1194920:intron | 30.0% | |
| CATTCCGACTTAATATTCTT+TGG | - | chr8_1:42455012-42455031 | None:intergenic | 30.0% | |
| CAAAGAATATTAAGTCGGAA+TGG | + | chr8_1:42455010-42455029 | Msa1194920:intron | 30.0% | |
| AAATTATGGTTCACCTAACT+TGG | - | chr8_1:42455195-42455214 | None:intergenic | 30.0% | |
| CATATTGTGAAGACAGTAAT+TGG | + | chr8_1:42455424-42455443 | Msa1194920:CDS | 30.0% | |
| TAGTAGTTTGAGGGATAAAA+AGG | + | chr8_1:42455492-42455511 | Msa1194920:CDS | 30.0% | |
| TGTTTGTACTCTCAATCCTT+TGG | - | chr8_1:42453019-42453038 | None:intergenic | 35.0% | |
| ! | TGAGAGTACAAACAATGTGT+TGG | + | chr8_1:42453025-42453044 | Msa1194920:five_prime_UTR | 35.0% |
| AATGAGTATCTTGAAGGAAC+AGG | + | chr8_1:42453245-42453264 | Msa1194920:five_prime_UTR | 35.0% | |
| TTCTTTGTAGTCATGCTTTG+CGG | + | chr8_1:42453420-42453439 | Msa1194920:five_prime_UTR | 35.0% | |
| ATCATTGATCACTGAAATGG+AGG | - | chr8_1:42453564-42453583 | None:intergenic | 35.0% | |
| AGCATTGCGATAAAGAATAC+CGG | - | chr8_1:42453594-42453613 | None:intergenic | 35.0% | |
| !! | GTCATTCTACCATCTAGTTT+TGG | + | chr8_1:42453622-42453641 | Msa1194920:five_prime_UTR | 35.0% |
| CTTGACTTTCCAAAACTAGA+TGG | - | chr8_1:42453634-42453653 | None:intergenic | 35.0% | |
| ! | TAGCAATGGTGGAGTAATTA+AGG | - | chr8_1:42454029-42454048 | None:intergenic | 35.0% |
| AAAGTAGCAATTCCCGTAAA+GGG | + | chr8_1:42454193-42454212 | Msa1194920:intron | 35.0% | |
| GAATCTGTTAAACCTTCACA+AGG | + | chr8_1:42454349-42454368 | Msa1194920:intron | 35.0% | |
| AGAAAAGCTCAAATGGCATT+TGG | + | chr8_1:42454472-42454491 | Msa1194920:intron | 35.0% | |
| CTTTAGCATGTCTTTGCATA+TGG | + | chr8_1:42454531-42454550 | Msa1194920:intron | 35.0% | |
| TATAGGATATATTGCTCCAG+AGG | + | chr8_1:42454624-42454643 | Msa1194920:intron | 35.0% | |
| ! | TTTGGTTGGCTGTTTCATAA+TGG | + | chr8_1:42454661-42454680 | Msa1194920:intron | 35.0% |
| !!! | TTTTTTGTCAAGTAACCCAG+TGG | + | chr8_1:42454749-42454768 | Msa1194920:intron | 35.0% |
| AAGGTGAATTTCAAACCACT+GGG | - | chr8_1:42454767-42454786 | None:intergenic | 35.0% | |
| AAAGGTGAATTTCAAACCAC+TGG | - | chr8_1:42454768-42454787 | None:intergenic | 35.0% | |
| CTCACTTATTCCCCTTAAAA+AGG | - | chr8_1:42454786-42454805 | None:intergenic | 35.0% | |
| !! | CTTTTTAAGGGGAATAAGTG+AGG | + | chr8_1:42454784-42454803 | Msa1194920:intron | 35.0% |
| ! | TCATCATCTAAGGTAGTTGT+TGG | + | chr8_1:42455046-42455065 | Msa1194920:intron | 35.0% |
| AAATCCACTAAGCTGATCTT+AGG | + | chr8_1:42455092-42455111 | Msa1194920:intron | 35.0% | |
| CTTTGCCCTTTCTCAATTAT+TGG | + | chr8_1:42455160-42455179 | Msa1194920:intron | 35.0% | |
| ! | TTGGAATTTTCTGCCAAGTT+AGG | + | chr8_1:42455179-42455198 | Msa1194920:intron | 35.0% |
| AAGGACAAAAATTGCACAGA+TGG | - | chr8_1:42455394-42455413 | None:intergenic | 35.0% | |
| TCACACAAGCATCAAGAAAA+AGG | - | chr8_1:42455561-42455580 | None:intergenic | 35.0% | |
| ! | TTTTTCTTGATGCTTGTGTG+AGG | + | chr8_1:42455560-42455579 | Msa1194920:CDS | 35.0% |
| AGCATTAACTCAATCAGACA+CGG | - | chr8_1:42455607-42455626 | None:intergenic | 35.0% | |
| ATTGAGTTAATGCTGCTGAT+GGG | + | chr8_1:42455613-42455632 | Msa1194920:CDS | 35.0% | |
| TTGCAGATTTCGGATATGAA+TGG | + | chr8_1:42455670-42455689 | Msa1194920:CDS | 35.0% | |
| TGGTTTGAGAGATGAAATGA+TGG | + | chr8_1:42455690-42455709 | Msa1194920:CDS | 35.0% | |
| ! | TAACAAGAGGAGGTGTACTT+TGG | - | chr8_1:42453157-42453176 | None:intergenic | 40.0% |
| AACATTACGGCATGCATCTA+CGG | + | chr8_1:42453190-42453209 | Msa1194920:five_prime_UTR | 40.0% | |
| TTGCCGCAAGTTTGATTCAA+TGG | + | chr8_1:42453394-42453413 | Msa1194920:five_prime_UTR | 40.0% | |
| TGCCGCAAGTTTGATTCAAT+GGG | + | chr8_1:42453395-42453414 | Msa1194920:five_prime_UTR | 40.0% | |
| TGCCCATTGAATCAAACTTG+CGG | - | chr8_1:42453400-42453419 | None:intergenic | 40.0% | |
| AGGCATGTGCTCATAAATCA+CGG | - | chr8_1:42453519-42453538 | None:intergenic | 40.0% | |
| TGATTTATGAGCACATGCCT+AGG | + | chr8_1:42453519-42453538 | Msa1194920:five_prime_UTR | 40.0% | |
| GATTTATGAGCACATGCCTA+GGG | + | chr8_1:42453520-42453539 | Msa1194920:five_prime_UTR | 40.0% | |
| ATTTATGAGCACATGCCTAG+GGG | + | chr8_1:42453521-42453540 | Msa1194920:five_prime_UTR | 40.0% | |
| ! | GTGATCAATGATGATGATGC+CGG | + | chr8_1:42453572-42453591 | Msa1194920:five_prime_UTR | 40.0% |
| GAGGCAGTTAATTCGTCTAT+GGG | + | chr8_1:42453835-42453854 | Msa1194920:exon | 40.0% | |
| GAAAGTAGCAATTCCCGTAA+AGG | + | chr8_1:42454192-42454211 | Msa1194920:intron | 40.0% | |
| ATGCCAATGTGTTCATAGGA+TGG | + | chr8_1:42454218-42454237 | Msa1194920:intron | 40.0% | |
| CTTCCATCCTATGAACACAT+TGG | - | chr8_1:42454224-42454243 | None:intergenic | 40.0% | |
| !! | AACATCTATTGGCCTTGTGA+AGG | - | chr8_1:42454364-42454383 | None:intergenic | 40.0% |
| ! | CTTCTCAGCAATGGTGTTTT+GGG | - | chr8_1:42454599-42454618 | None:intergenic | 40.0% |
| ! | TCTTCTCAGCAATGGTGTTT+TGG | - | chr8_1:42454600-42454619 | None:intergenic | 40.0% |
| AAAACACCATTGCTGAGAAG+AGG | + | chr8_1:42454599-42454618 | Msa1194920:intron | 40.0% | |
| AAACACCATTGCTGAGAAGA+GGG | + | chr8_1:42454600-42454619 | Msa1194920:intron | 40.0% | |
| !! | TGTTCCGCAGAAATTTTGGT+TGG | + | chr8_1:42454647-42454666 | Msa1194920:intron | 40.0% |
| ACAGCCAACCAAAATTTCTG+CGG | - | chr8_1:42454654-42454673 | None:intergenic | 40.0% | |
| TGCAATGTGAGTTAAGCTCA+CGG | + | chr8_1:42454843-42454862 | Msa1194920:intron | 40.0% | |
| AACCTAGGTATAACTGTTGC+AGG | - | chr8_1:42455349-42455368 | None:intergenic | 40.0% | |
| !! | CTAGGTTGATGCCTAACAAA+GGG | + | chr8_1:42455362-42455381 | Msa1194920:CDS | 40.0% |
| GATTGAGTTAATGCTGCTGA+TGG | + | chr8_1:42455612-42455631 | Msa1194920:CDS | 40.0% | |
| TTGAGTTAATGCTGCTGATG+GGG | + | chr8_1:42455614-42455633 | Msa1194920:CDS | 40.0% | |
| TGTACTCTCAATCCTTTGGC+AGG | - | chr8_1:42453015-42453034 | None:intergenic | 45.0% | |
| ATTCCTCCTCAACCTCTATG+CGG | - | chr8_1:42453124-42453143 | None:intergenic | 45.0% | |
| GAGTATCTTGAAGGAACAGG+TGG | + | chr8_1:42453248-42453267 | Msa1194920:five_prime_UTR | 45.0% | |
| TACTTGATATTGGGGCTGAG+AGG | + | chr8_1:42453687-42453706 | Msa1194920:five_prime_UTR | 45.0% | |
| ACTTGATATTGGGGCTGAGA+GGG | + | chr8_1:42453688-42453707 | Msa1194920:five_prime_UTR | 45.0% | |
| GGAAACATGCTTCAGACCAT+TGG | + | chr8_1:42453784-42453803 | Msa1194920:five_prime_UTR | 45.0% | |
| GGAGGCAGTTAATTCGTCTA+TGG | + | chr8_1:42453834-42453853 | Msa1194920:exon | 45.0% | |
| GTTCGTGCAATTGAGAACAC+TGG | - | chr8_1:42453869-42453888 | None:intergenic | 45.0% | |
| ACATTGGCATTGCCCTTTAC+GGG | - | chr8_1:42454208-42454227 | None:intergenic | 45.0% | |
| CACATTGGCATTGCCCTTTA+CGG | - | chr8_1:42454209-42454228 | None:intergenic | 45.0% | |
| GGCAATGCCAATGTGTTCAT+AGG | + | chr8_1:42454214-42454233 | Msa1194920:intron | 45.0% | |
| CTCAAATGGCATTTGGACCT+TGG | + | chr8_1:42454479-42454498 | Msa1194920:intron | 45.0% | |
| TATAGCCCTCTTCTCAGCAA+TGG | - | chr8_1:42454608-42454627 | None:intergenic | 45.0% | |
| ATTGCTGAGAAGAGGGCTAT+AGG | + | chr8_1:42454607-42454626 | Msa1194920:intron | 45.0% | |
| AAATTTCTGCGGAACACCTC+TGG | - | chr8_1:42454643-42454662 | None:intergenic | 45.0% | |
| !! | GAGGTGTTCCGCAGAAATTT+TGG | + | chr8_1:42454643-42454662 | Msa1194920:intron | 45.0% |
| AGGGGAATAAGTGAGGTGTA+TGG | + | chr8_1:42454791-42454810 | Msa1194920:intron | 45.0% | |
| GGGGAATAAGTGAGGTGTAT+GGG | + | chr8_1:42454792-42454811 | Msa1194920:intron | 45.0% | |
| GGGAATAAGTGAGGTGTATG+GGG | + | chr8_1:42454793-42454812 | Msa1194920:intron | 45.0% | |
| GCAATGTGAGTTAAGCTCAC+GGG | + | chr8_1:42454844-42454863 | Msa1194920:intron | 45.0% | |
| GCTTCCTAAGATCAGCTTAG+TGG | - | chr8_1:42455099-42455118 | None:intergenic | 45.0% | |
| GTTGCAGCAGCATACATTAC+TGG | + | chr8_1:42455123-42455142 | Msa1194920:intron | 45.0% | |
| GGTATAACTGTTGCAGGAGA+CGG | - | chr8_1:42455343-42455362 | None:intergenic | 45.0% | |
| CTCCTGCAACAGTTATACCT+AGG | + | chr8_1:42455344-42455363 | Msa1194920:CDS | 45.0% | |
| CCTTTGTTAGGCATCAACCT+AGG | - | chr8_1:42455364-42455383 | None:intergenic | 45.0% | |
| !! | CCTAGGTTGATGCCTAACAA+AGG | + | chr8_1:42455361-42455380 | Msa1194920:CDS | 45.0% |
| GATGGCACAAACCCTTTGTT+AGG | - | chr8_1:42455376-42455395 | None:intergenic | 45.0% | |
| CTGGTATCAAGTCCTGCCAA+AGG | + | chr8_1:42453000-42453019 | Msa1194920:five_prime_UTR | 50.0% | |
| GAATCTTCTCCCATACCCCT+AGG | - | chr8_1:42453539-42453558 | None:intergenic | 50.0% | |
| TGAGTTAAGCTCACGGGTCA+CGG | + | chr8_1:42454850-42454869 | Msa1194920:intron | 50.0% | |
| GAAAAAGTGGCGCCGCATAG+AGG | + | chr8_1:42453109-42453128 | Msa1194920:five_prime_UTR | 55.0% | |
| TGAGCACATGCCTAGGGGTA+TGG | + | chr8_1:42453526-42453545 | Msa1194920:five_prime_UTR | 55.0% | |
| ! | GAGCACATGCCTAGGGGTAT+GGG | + | chr8_1:42453527-42453546 | Msa1194920:five_prime_UTR | 55.0% |
| ! | GAGAGGGTGCGAAAAGGTGT+TGG | + | chr8_1:42453704-42453723 | Msa1194920:five_prime_UTR | 55.0% |
| !! | GGTGCGAAAAGGTGTTGGCA+AGG | + | chr8_1:42453709-42453728 | Msa1194920:five_prime_UTR | 55.0% |
| GGTGTATGGGGTTCGAACGT+CGG | + | chr8_1:42454805-42454824 | Msa1194920:intron | 55.0% | |
| GGACAGTAGCTGATGCACAC+TGG | + | chr8_1:42455635-42455654 | Msa1194920:CDS | 55.0% | |
| GTTAAGCTCACGGGTCACGG+CGG | + | chr8_1:42454853-42454872 | Msa1194920:intron | 60.0% | |
| GTGGCGCCGCATAGAGGTTG+AGG | + | chr8_1:42453115-42453134 | Msa1194920:five_prime_UTR | 65.0% | |
| GCGCCGCATAGAGGTTGAGG+AGG | + | chr8_1:42453118-42453137 | Msa1194920:five_prime_UTR | 65.0% | |
| ! | GGGGCTGAGAGGGTGCGAAA+AGG | + | chr8_1:42453698-42453717 | Msa1194920:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 42452996 | 42455801 | 42452996 | ID=Msa1194920;Name=Msa1194920 |
| chr8_1 | mRNA | 42452996 | 42455801 | 42452996 | ID=Msa1194920-mRNA-1;Parent=Msa1194920;Name=Msa1194920-mRNA-1;_AED=0.35;_eAED=0.35;_QI=857|0|0.5|0.5|1|1|2|0|171 |
| chr8_1 | exon | 42452996 | 42453856 | 42452996 | ID=Msa1194920-mRNA-1:exon:13684;Parent=Msa1194920-mRNA-1 |
| chr8_1 | exon | 42455290 | 42455801 | 42455290 | ID=Msa1194920-mRNA-1:exon:13685;Parent=Msa1194920-mRNA-1 |
| chr8_1 | five_prime_UTR | 42452996 | 42453852 | 42452996 | ID=Msa1194920-mRNA-1:five_prime_utr;Parent=Msa1194920-mRNA-1 |
| chr8_1 | CDS | 42453853 | 42453856 | 42453853 | ID=Msa1194920-mRNA-1:cds;Parent=Msa1194920-mRNA-1 |
| chr8_1 | CDS | 42455290 | 42455801 | 42455290 | ID=Msa1194920-mRNA-1:cds;Parent=Msa1194920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
