Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926340 | KEH27200.1 | 98.081 | 521 | 10 | 0 | 1 | 521 | 1 | 521 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0644980 | Msa0926340 | 0.812138 | 4.929461e-51 | -8.615850e-47 |
| Msa0684500 | Msa0926340 | 0.828271 | 9.864593e-55 | -8.615850e-47 |
| Msa0264590 | Msa0926340 | 0.814848 | 1.249778e-51 | -8.615850e-47 |
| Msa0339980 | Msa0926340 | 0.822378 | 2.446549e-53 | -8.615850e-47 |
| Msa0548620 | Msa0926340 | 0.839531 | 1.498953e-57 | -8.615850e-47 |
| Msa0900730 | Msa0926340 | 0.868746 | 5.190682e-66 | -8.615850e-47 |
| Msa0926340 | Msa1024740 | 0.810457 | 1.141979e-50 | -8.615850e-47 |
| Msa0926340 | Msa1108790 | 0.817533 | 3.138281e-52 | -8.615850e-47 |
| Msa0926340 | Msa1152510 | 0.827331 | 1.659723e-54 | -8.615850e-47 |
| Msa0926340 | Msa1399160 | 0.847282 | 1.276086e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926340 | MtrunA17_Chr6g0486901 | 92.543 | 523 | 11 | 2 | 27 | 521 | 3 | 525 | 0.0 | 999 |
| Msa0926340 | MtrunA17_Chr8g0389871 | 77.519 | 516 | 116 | 0 | 4 | 519 | 1 | 516 | 0.0 | 859 |
| Msa0926340 | MtrunA17_Chr8g0389861 | 58.936 | 470 | 130 | 7 | 55 | 495 | 1 | 436 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926340 | AT2G19880.2 | 73.654 | 520 | 133 | 2 | 1 | 519 | 1 | 517 | 0.0 | 808 |
| Msa0926340 | AT2G19880.1 | 73.410 | 519 | 135 | 1 | 1 | 519 | 1 | 516 | 0.0 | 806 |
Find 121 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAACTGATCTTAATTT+TGG | 0.142854 | 6_2:+69902337 | Msa0926340:CDS |
| ATTTGCTTAGTCTTAGCTTT+TGG | 0.183862 | 6_2:+69899731 | Msa0926340:CDS |
| GTGAACACAATCTCCATAAT+TGG | 0.204953 | 6_2:+69900174 | Msa0926340:CDS |
| GATTTACCATCTGGAAGTTT+AGG | 0.240624 | 6_2:+69901439 | Msa0926340:CDS |
| TCAAAATTCTCTTCTCCTTT+TGG | 0.241567 | 6_2:+69898698 | Msa0926340:CDS |
| ATTTCTCTCAATCTATTAAT+TGG | 0.244531 | 6_2:+69903825 | Msa0926340:CDS |
| TTTCTATTGTTAACTATAAC+TGG | 0.262552 | 6_2:+69903080 | Msa0926340:CDS |
| AGCACTACAGTTTCACTATA+AGG | 0.268141 | 6_2:+69902592 | Msa0926340:CDS |
| GTTTGTATTGCCATACATTA+TGG | 0.268751 | 6_2:+69902550 | Msa0926340:CDS |
| ATTTACCATCTGGAAGTTTA+GGG | 0.283503 | 6_2:+69901440 | Msa0926340:CDS |
| ATACCTGAGTCCTCCAATTA+TGG | 0.293207 | 6_2:-69900187 | None:intergenic |
| ACGCCATTCCGTGTATTTCT+TGG | 0.293850 | 6_2:-69904299 | Msa0926350:three_prime_UTR |
| GGCATAATTACTGTTACTTT+TGG | 0.301670 | 6_2:-69900137 | None:intergenic |
| GAGGAAACAAACATTTGTTT+TGG | 0.302949 | 6_2:+69902454 | Msa0926340:CDS |
| GTTCCACAGCCTTGTTCAAT+AGG | 0.305475 | 6_2:+69901794 | Msa0926340:intron |
| ATGCAGTTAACATCTCTATA+TGG | 0.320655 | 6_2:+69900295 | Msa0926340:intron |
| TGTTCACCAAACCCCTTTAG+AGG | 0.321880 | 6_2:-69900158 | None:intergenic |
| CCAGCCAAGTCTGTGAAAAC+TGG | 0.324887 | 6_2:-69904217 | Msa0926350:three_prime_UTR |
| ACAGAAAATGACATAGAAAT+AGG | 0.326187 | 6_2:+69898525 | Msa0926340:five_prime_UTR |
| AAAGAGAGATAAGAAGAATA+AGG | 0.327477 | 6_2:+69900033 | Msa0926340:CDS |
| GAAGGAATCAAGAGAGTCTA+AGG | 0.336295 | 6_2:-69898660 | None:intergenic |
| GAGGAAATTGCCTACACTTC+TGG | 0.342815 | 6_2:+69902626 | Msa0926340:CDS |
| TGAGAACGAATTGCAGATAT+AGG | 0.345163 | 6_2:-69903803 | Msa0926350:three_prime_UTR |
| TTGGGTTTCGAAGGCTCGTC+AGG | 0.346305 | 6_2:+69904407 | Msa0926340:three_prime_UTR |
| TTGTAGTTATTCAGATCTCT+TGG | 0.360716 | 6_2:-69904326 | Msa0926350:three_prime_UTR |
| CTTGAGGTCTGCCTTGGTCC+TGG | 0.367170 | 6_2:-69904431 | Msa0926350:three_prime_UTR |
| CAACAGATATTTATACAAAC+TGG | 0.383560 | 6_2:+69901406 | Msa0926340:intron |
| ACTGGAGCCATATCCTTGTT+TGG | 0.388189 | 6_2:-69904199 | Msa0926350:three_prime_UTR |
| CCGTTCACTGTTATTTGTCA+TGG | 0.389579 | 6_2:+69902525 | Msa0926340:CDS |
| GGGCTTCAGCTGCTTGTGTC+AGG | 0.391633 | 6_2:+69899756 | Msa0926340:CDS |
| TACAAAGGCTTAAGTGAGTT+GGG | 0.394097 | 6_2:+69904389 | Msa0926340:three_prime_UTR |
| GCACTACAGTTTCACTATAA+GGG | 0.400260 | 6_2:+69902593 | Msa0926340:CDS |
| CGTTCACTGTTATTTGTCAT+GGG | 0.402189 | 6_2:+69902526 | Msa0926340:CDS |
| ACAGTAATTATGCCTCTAAA+GGG | 0.403158 | 6_2:+69900146 | Msa0926340:CDS |
| TCTCAATCTATTAATTGGTC+TGG | 0.404186 | 6_2:+69903830 | Msa0926340:CDS |
| GACTCAACCAAACAAGGATA+TGG | 0.406315 | 6_2:+69904192 | Msa0926340:CDS |
| AACAGTAATTATGCCTCTAA+AGG | 0.410626 | 6_2:+69900145 | Msa0926340:CDS |
| TATCCTCTTGATTTACCATC+TGG | 0.416747 | 6_2:+69901430 | Msa0926340:CDS |
| CGATCAACCATGTGGGAGAT+AGG | 0.421434 | 6_2:-69904482 | Msa0926350:three_prime_UTR |
| TGTAGTTATTCAGATCTCTT+GGG | 0.431677 | 6_2:-69904325 | Msa0926350:three_prime_UTR |
| AAGATTACTATCAGAATTTG+AGG | 0.432221 | 6_2:+69900381 | Msa0926340:CDS |
| GAGAACGAATTGCAGATATA+GGG | 0.440054 | 6_2:-69903802 | Msa0926350:three_prime_UTR |
| CCTTCTCTCAGGGTTATCAC+TGG | 0.443034 | 6_2:+69902952 | Msa0926340:intron |
| AGAAAAGGGTTTCCTTCAAA+AGG | 0.452780 | 6_2:+69904256 | Msa0926340:CDS |
| ATTATGCCTCTAAAGGGGTT+TGG | 0.453265 | 6_2:+69900152 | Msa0926340:CDS |
| ATAGAAAGAGGAGGTTCCTC+TGG | 0.454463 | 6_2:-69903064 | None:intergenic |
| TTCGAAGGCTCGTCAGGGCC+AGG | 0.456451 | 6_2:+69904413 | Msa0926340:three_prime_UTR |
| TGAACCATTGCCATAATGTA+TGG | 0.465949 | 6_2:-69902560 | None:intergenic |
| ATATTTGCTGTCTTTATCCA+TGG | 0.470720 | 6_2:-69901037 | None:intergenic |
| AGCCTACATCCTGGATCAAT+TGG | 0.471767 | 6_2:+69901084 | Msa0926340:CDS |
| AAGCTCAAGAAGAGTGCATA+TGG | 0.473573 | 6_2:-69902987 | None:intergenic |
| TGAACTTGAGCATTCCAATC+AGG | 0.475510 | 6_2:+69900106 | Msa0926340:CDS |
| AGATCAGTTGCAAGCGGGTG+AGG | 0.481446 | 6_2:-69902328 | None:intergenic |
| ATGACTCTTGCAGCCATAGC+TGG | 0.488562 | 6_2:+69902018 | Msa0926340:CDS |
| ATGCTCCTTGAGGTCTGCCT+TGG | 0.492567 | 6_2:-69904437 | Msa0926350:three_prime_UTR |
| CTTGATACAGCATGGTAAGC+AGG | 0.492748 | 6_2:-69900361 | None:intergenic |
| ATACAAAGGCTTAAGTGAGT+TGG | 0.494076 | 6_2:+69904388 | Msa0926340:three_prime_UTR |
| TGAGCTGAGAGAAAAGAGGA+AGG | 0.500770 | 6_2:-69898678 | None:intergenic |
| ACAGGTACTGGAATTATTTG+AGG | 0.502463 | 6_2:+69902435 | Msa0926340:intron |
| GAGGCTAGGGTAATTGTAGC+TGG | 0.508050 | 6_2:+69900507 | Msa0926340:CDS |
| TGGTGCACTCGCTCGTGAGA+TGG | 0.517702 | 6_2:+69901104 | Msa0926340:CDS |
| GCGAGTGCACCAATTGATCC+AGG | 0.527955 | 6_2:-69901093 | None:intergenic |
| TAGAAAGAGGAGGTTCCTCT+GGG | 0.529248 | 6_2:-69903063 | None:intergenic |
| TTGCATCTATGAATACCATA+TGG | 0.530535 | 6_2:+69901468 | Msa0926340:CDS |
| CAGGACCAAGGCAGACCTCA+AGG | 0.537760 | 6_2:+69904432 | Msa0926340:three_prime_UTR |
| GTAGTCTCAGAACTTCGAAA+TGG | 0.539131 | 6_2:+69901979 | Msa0926340:CDS |
| GGTATTCATTGCTATGTTGG+TGG | 0.540526 | 6_2:+69903766 | Msa0926340:intron |
| GGGTGAGGAAAGACAGCGAC+TGG | 0.541222 | 6_2:-69902313 | None:intergenic |
| GCAGGTATTCATTGCTATGT+TGG | 0.542529 | 6_2:+69903763 | Msa0926340:intron |
| TTAAGTGAGTTGGGTTTCGA+AGG | 0.543611 | 6_2:+69904398 | Msa0926340:three_prime_UTR |
| GCAGGGTTCTGTAGAGGCTA+GGG | 0.545200 | 6_2:+69900494 | Msa0926340:intron |
| ATTGCCATACATTATGGCAA+TGG | 0.548542 | 6_2:+69902556 | Msa0926340:CDS |
| GTCTCAGAACTTCGAAATGG+TGG | 0.551163 | 6_2:+69901982 | Msa0926340:CDS |
| TGCAGGGTTCTGTAGAGGCT+AGG | 0.552549 | 6_2:+69900493 | Msa0926340:intron |
| TGTTCAATAGGATTTGCCAC+TGG | 0.556712 | 6_2:+69901806 | Msa0926340:CDS |
| GGCAATTGAGCAGGTTGGAG+TGG | 0.560575 | 6_2:+69901011 | Msa0926340:intron |
| ATAAGGAGAAGTATGCAGAA+TGG | 0.562928 | 6_2:+69900050 | Msa0926340:CDS |
| TCAATAGGATTTGCCACTGG+TGG | 0.565490 | 6_2:+69901809 | Msa0926340:CDS |
| GTTCACTGTTATTTGTCATG+GGG | 0.566659 | 6_2:+69902527 | Msa0926340:CDS |
| CTTCCAGATGGTAAATCAAG+AGG | 0.568638 | 6_2:-69901433 | None:intergenic |
| ATATATGCAGGGTTCTGTAG+AGG | 0.569292 | 6_2:+69900488 | Msa0926340:intron |
| TTTCAATGTGGAACTTGACA+AGG | 0.569660 | 6_2:+69903011 | Msa0926340:CDS |
| TATCAATTACTCACCAGCTA+TGG | 0.571387 | 6_2:-69902031 | None:intergenic |
| AACACAATCTCCATAATTGG+AGG | 0.573745 | 6_2:+69900177 | Msa0926340:CDS |
| TTCTTGAGCTTCTTTCAATG+TGG | 0.576638 | 6_2:+69902999 | Msa0926340:CDS |
| GATGATGTGAGCCTACATCC+TGG | 0.578008 | 6_2:+69901075 | Msa0926340:CDS |
| AATTAAGATCAGTTGCAAGC+GGG | 0.578085 | 6_2:-69902333 | None:intergenic |
| GCTCGTCAGGGCCAGGACCA+AGG | 0.581447 | 6_2:+69904420 | Msa0926340:three_prime_UTR |
| TGTCCAAGAAATACACGGAA+TGG | 0.590755 | 6_2:+69904296 | Msa0926340:CDS |
| TTATAGTTAACAATAGAAAG+AGG | 0.591156 | 6_2:-69903076 | None:intergenic |
| GAATCAAGAGAGTCTAAGGA+AGG | 0.592133 | 6_2:-69898656 | None:intergenic |
| TCTCCATAATTGGAGGACTC+AGG | 0.594738 | 6_2:+69900184 | Msa0926340:CDS |
| AGATAGGACTCAACCAAACA+AGG | 0.601132 | 6_2:+69904186 | Msa0926340:CDS |
| CACCAATTGATCCAGGATGT+AGG | 0.603231 | 6_2:-69901086 | None:intergenic |
| ATAGTGCGCGGTTCATCACA+CGG | 0.603482 | 6_2:-69902499 | None:intergenic |
| ATTCTCACCACCAGAAGTGT+AGG | 0.604998 | 6_2:-69902636 | None:intergenic |
| TTCACTGTTATTTGTCATGG+GGG | 0.612659 | 6_2:+69902528 | Msa0926340:CDS |
| TTTGTGGGGAGGTTGCATGA+TGG | 0.615178 | 6_2:+69901844 | Msa0926340:CDS |
| TGGGTTTCGAAGGCTCGTCA+GGG | 0.615860 | 6_2:+69904408 | Msa0926340:three_prime_UTR |
| CGTATATTGTATGCTCCTTG+AGG | 0.617384 | 6_2:-69904447 | Msa0926350:three_prime_UTR |
| CAGTAATTATGCCTCTAAAG+GGG | 0.620606 | 6_2:+69900147 | Msa0926340:CDS |
| ATAGTAATCTTGATACAGCA+TGG | 0.621568 | 6_2:-69900369 | None:intergenic |
| ACAACTAAAATAAATTCTAG+AGG | 0.625172 | 6_2:-69900322 | None:intergenic |
| CAGTTAACATCTCTATATGG+TGG | 0.629135 | 6_2:+69900298 | Msa0926340:intron |
| CCATGACAAATAACAGTGAA+CGG | 0.629945 | 6_2:-69902525 | None:intergenic |
| TAACTCCCTAAACTTCCAGA+TGG | 0.632432 | 6_2:-69901445 | None:intergenic |
| GAAATTGCCTACACTTCTGG+TGG | 0.632664 | 6_2:+69902629 | Msa0926340:CDS |
| CTATAAGGGTTACTCAGTCG+AGG | 0.635666 | 6_2:+69902607 | Msa0926340:CDS |
| TGAGGAAAGACAGCGACTGG+CGG | 0.638947 | 6_2:-69902310 | None:intergenic |
| GACTTTATGCAAGATAATTG+TGG | 0.643767 | 6_2:+69901955 | Msa0926340:CDS |
| AAATTAAGATCAGTTGCAAG+CGG | 0.644079 | 6_2:-69902334 | None:intergenic |
| GCAGGTTGGAGTGGAGACCA+TGG | 0.647333 | 6_2:+69901020 | Msa0926340:intron |
| TTGGACAATGAACTGAGGAG+TGG | 0.648576 | 6_2:-69904280 | Msa0926350:three_prime_UTR |
| GTGGCAAATCCTATTGAACA+AGG | 0.668813 | 6_2:-69901803 | None:intergenic |
| TTGCAACATGTTGTCCCCAG+AGG | 0.669715 | 6_2:+69903048 | Msa0926340:CDS |
| TAGTTAACAATAGAAAGAGG+AGG | 0.671598 | 6_2:-69903073 | None:intergenic |
| TGAGATGGAAAGAAATCCTG+AGG | 0.674371 | 6_2:+69901119 | Msa0926340:CDS |
| TTCATTGTCCAAGAAATACA+CGG | 0.678174 | 6_2:+69904291 | Msa0926340:CDS |
| ATTTCTTGGACAATGAACTG+AGG | 0.733974 | 6_2:-69904285 | Msa0926350:three_prime_UTR |
| AGTGAACGGTGAATAGTGCG+CGG | 0.735851 | 6_2:-69902511 | None:intergenic |
| AGAAAGAGGAGGTTCCTCTG+GGG | 0.759136 | 6_2:-69903062 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | - | chr6_2:69899141-69899160 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6_2:69899142-69899161 | None:intergenic | 0.0% |
| !!! | ATTTTAAGACATTAAATATA+TGG | - | chr6_2:69899607-69899626 | None:intergenic | 10.0% |
| !! | ATTTAATGTCTTAAAATATT+AGG | + | chr6_2:69899610-69899629 | Msa0926340:intron | 10.0% |
| !! | AAAAAATATATGCAATAAAA+AGG | - | chr6_2:69900578-69900597 | None:intergenic | 10.0% |
| !!! | TATTATTTTCAAACAATTTA+CGG | + | chr6_2:69900599-69900618 | Msa0926340:intron | 10.0% |
| !! | ATGTACTTTAATTGAAAATT+GGG | - | chr6_2:69899488-69899507 | None:intergenic | 15.0% |
| !! | TATGTACTTTAATTGAAAAT+TGG | - | chr6_2:69899489-69899508 | None:intergenic | 15.0% |
| !! | ATTAAAGTACATATAAAACA+AGG | + | chr6_2:69899496-69899515 | Msa0926340:intron | 15.0% |
| !!! | TTTGTTTTCTTAAACTATTA+CGG | - | chr6_2:69899846-69899865 | None:intergenic | 15.0% |
| !!! | TAATAATCTTTTATATATGC+AGG | + | chr6_2:69900476-69900495 | Msa0926340:intron | 15.0% |
| !!! | AATAATCTTTTATATATGCA+GGG | + | chr6_2:69900477-69900496 | Msa0926340:intron | 15.0% |
| !!! | TAAATTTTCAATTCAAGATT+AGG | + | chr6_2:69900792-69900811 | Msa0926340:intron | 15.0% |
| !! | TCTTGAATATCAATTTATTA+TGG | + | chr6_2:69901611-69901630 | Msa0926340:intron | 15.0% |
| !!! | TTTTTTCGTATTTATCATAT+AGG | + | chr6_2:69902228-69902247 | Msa0926340:intron | 15.0% |
| !! | ATTATATACCATTTGAAAAA+TGG | + | chr6_2:69903854-69903873 | Msa0926340:CDS | 15.0% |
| !! | ACTTATAACAATAAACTATT+TGG | + | chr6_2:69904048-69904067 | Msa0926340:intron | 15.0% |
| !! | ATTTGAATGAAAAATCCAAA+AGG | - | chr6_2:69898716-69898735 | None:intergenic | 20.0% |
| !! | TACATTGTATGCATATATAA+AGG | - | chr6_2:69898866-69898885 | None:intergenic | 20.0% |
| !!! | AGTTTGATTTAATAATCTCA+AGG | + | chr6_2:69899392-69899411 | Msa0926340:intron | 20.0% |
| !! | TGTACTTTAATTGAAAATTG+GGG | - | chr6_2:69899487-69899506 | None:intergenic | 20.0% |
| !! | AACATAAAATTCAGATTATG+GGG | - | chr6_2:69899692-69899711 | None:intergenic | 20.0% |
| !! | GAACATAAAATTCAGATTAT+GGG | - | chr6_2:69899693-69899712 | None:intergenic | 20.0% |
| !! | TGAACATAAAATTCAGATTA+TGG | - | chr6_2:69899694-69899713 | None:intergenic | 20.0% |
| !! | TTTAAGAAAACAAAAGTGAT+TGG | + | chr6_2:69899852-69899871 | Msa0926340:intron | 20.0% |
| !! | TGCAATATTTAATGTTATAG+TGG | - | chr6_2:69900223-69900242 | None:intergenic | 20.0% |
| !! | ACAACTAAAATAAATTCTAG+AGG | - | chr6_2:69900325-69900344 | None:intergenic | 20.0% |
| !! | TCAAAAAATTCACAATCAAT+TGG | + | chr6_2:69900548-69900567 | Msa0926340:CDS | 20.0% |
| !!! | TCTACACATGTTTTTAAATT+CGG | - | chr6_2:69901315-69901334 | None:intergenic | 20.0% |
| !!! | GACGTTATTTGAAATATTTA+TGG | + | chr6_2:69901333-69901352 | Msa0926340:intron | 20.0% |
| !! | GAGTGTAATCAAATAATTAT+AGG | - | chr6_2:69901368-69901387 | None:intergenic | 20.0% |
| !! | AAACCAAAGAAAAAGAAAAA+AGG | - | chr6_2:69901883-69901902 | None:intergenic | 20.0% |
| !!! | GAATACTACTTTTTCTTTTT+AGG | + | chr6_2:69902655-69902674 | Msa0926340:intron | 20.0% |
| !! | CAATATGTGTTTAAATACTA+CGG | - | chr6_2:69902705-69902724 | None:intergenic | 20.0% |
| !! | TTATAGTTAACAATAGAAAG+AGG | - | chr6_2:69903079-69903098 | None:intergenic | 20.0% |
| !! | TTTCTATTGTTAACTATAAC+TGG | + | chr6_2:69903080-69903099 | Msa0926340:CDS | 20.0% |
| !!! | GGATAAAAGACTTATTATTT+TGG | - | chr6_2:69903137-69903156 | None:intergenic | 20.0% |
| !!! | GAAAAACCAAAATTTTGAAT+TGG | + | chr6_2:69903215-69903234 | Msa0926340:intron | 20.0% |
| !! | AATGTGTATTTCTCATATAT+TGG | - | chr6_2:69903694-69903713 | None:intergenic | 20.0% |
| !! | ATTTCTCTCAATCTATTAAT+TGG | + | chr6_2:69903825-69903844 | Msa0926340:CDS | 20.0% |
| !!! | AGATTTTTCCATTTTTCAAA+TGG | - | chr6_2:69903865-69903884 | Msa0926350:three_prime_UTR | 20.0% |
| !! | TCTGAATAACTACAAAAAAA+TGG | + | chr6_2:69904334-69904353 | Msa0926340:exon | 20.0% |
| ! | ACAGAAAATGACATAGAAAT+AGG | + | chr6_2:69898525-69898544 | Msa0926340:five_prime_UTR | 25.0% |
| !! | TGGATTTTTCATTCAAATTC+AGG | + | chr6_2:69898718-69898737 | Msa0926340:CDS | 25.0% |
| !! | TTTTTCATTCAAATTCAGGT+AGG | + | chr6_2:69898722-69898741 | Msa0926340:intron | 25.0% |
| ! | CATATGGAATTGCAAAAAAA+GGG | - | chr6_2:69898832-69898851 | None:intergenic | 25.0% |
| ! | ACATATGGAATTGCAAAAAA+AGG | - | chr6_2:69898833-69898852 | None:intergenic | 25.0% |
| !! | AAAGGTTTCAGTTTTACATA+TGG | - | chr6_2:69898848-69898867 | None:intergenic | 25.0% |
| ! | ACACACACACATATATATAT+GGG | + | chr6_2:69898932-69898951 | Msa0926340:intron | 25.0% |
| !! | ATAGAAGACACATTTTATGA+AGG | + | chr6_2:69898960-69898979 | Msa0926340:intron | 25.0% |
| ! | AACAAAGTTTAAATCCTCTA+AGG | + | chr6_2:69899415-69899434 | Msa0926340:intron | 25.0% |
| !!! | TAAAACAAGGTCATTTTTGT+TGG | + | chr6_2:69899509-69899528 | Msa0926340:intron | 25.0% |
| ! | TTGAACAATATACAAGTGAA+AGG | + | chr6_2:69899579-69899598 | Msa0926340:intron | 25.0% |
| !! | AATTTTATGTTCAATGTGCA+GGG | + | chr6_2:69899701-69899720 | Msa0926340:intron | 25.0% |
| ! | AAAGAGAGATAAGAAGAATA+AGG | + | chr6_2:69900033-69900052 | Msa0926340:CDS | 25.0% |
| ! | AAGATTACTATCAGAATTTG+AGG | + | chr6_2:69900381-69900400 | Msa0926340:CDS | 25.0% |
| ! | ACTGAAATAGAGTGATTAAA+GGG | - | chr6_2:69900438-69900457 | None:intergenic | 25.0% |
| ! | AACTGAAATAGAGTGATTAA+AGG | - | chr6_2:69900439-69900458 | None:intergenic | 25.0% |
| !! | TAATCACTCTATTTCAGTTT+TGG | + | chr6_2:69900440-69900459 | Msa0926340:intron | 25.0% |
| ! | ATATAAGCAAGAAAAAAACC+AGG | - | chr6_2:69900642-69900661 | None:intergenic | 25.0% |
| ! | TATCATAGCTGTATCATTTA+TGG | + | chr6_2:69900702-69900721 | Msa0926340:intron | 25.0% |
| ! | CAATTCAAGATTAGGAAAAT+AGG | + | chr6_2:69900800-69900819 | Msa0926340:intron | 25.0% |
| ! | ATTTGAATCTAGGTTCAATA+TGG | + | chr6_2:69900837-69900856 | Msa0926340:intron | 25.0% |
| ! | TATTGTAAGACTAAGATAGT+TGG | - | chr6_2:69900986-69901005 | None:intergenic | 25.0% |
| !!! | TCTTAGTCTTACAATAGTAT+TGG | + | chr6_2:69900990-69901009 | Msa0926340:intron | 25.0% |
| !! | CAGCAAATATGTATTGTTTT+TGG | + | chr6_2:69901050-69901069 | Msa0926340:CDS | 25.0% |
| ! | CAACAGATATTTATACAAAC+TGG | + | chr6_2:69901406-69901425 | Msa0926340:intron | 25.0% |
| ! | ATACATGTATGAATTGAGTA+TGG | - | chr6_2:69901575-69901594 | None:intergenic | 25.0% |
| ! | ACTCAATTCATACATGTATT+TGG | + | chr6_2:69901576-69901595 | Msa0926340:intron | 25.0% |
| !!! | CTACCTTTTTTCTTTTTCTT+TGG | + | chr6_2:69901877-69901896 | Msa0926340:intron | 25.0% |
| ! | TTCTGTTTATTATCCTTTAC+AGG | + | chr6_2:69902262-69902281 | Msa0926340:intron | 25.0% |
| ! | TTAATTAGTTCAACATGTAC+AGG | + | chr6_2:69902417-69902436 | Msa0926340:intron | 25.0% |
| !!! | ACTACTTTTTCTTTTTAGGT+AGG | + | chr6_2:69902659-69902678 | Msa0926340:intron | 25.0% |
| ! | TTCAAATTATTACACAAGCT+TGG | - | chr6_2:69903158-69903177 | None:intergenic | 25.0% |
| !! | CTTCTTCCAATTCAAAATTT+TGG | - | chr6_2:69903224-69903243 | None:intergenic | 25.0% |
| ! | ATAAGTAGTTTATCCAAACA+AGG | - | chr6_2:69903343-69903362 | None:intergenic | 25.0% |
| ! | CTTTCTCTATTTCATATTGA+GGG | - | chr6_2:69903595-69903614 | None:intergenic | 25.0% |
| ! | ACTTTCTCTATTTCATATTG+AGG | - | chr6_2:69903596-69903615 | None:intergenic | 25.0% |
| ! | GAATTTGAGTGAATATATGT+TGG | + | chr6_2:69903623-69903642 | Msa0926340:intron | 25.0% |
| ! | ATGAGAAATACACATTTACT+AGG | + | chr6_2:69903698-69903717 | Msa0926340:intron | 25.0% |
| !!! | TCTTTAATTTTTTCTTGAGC+AGG | + | chr6_2:69903745-69903764 | Msa0926340:intron | 25.0% |
| ! | CTTATCTGATAAGTACTTAT+TGG | - | chr6_2:69903959-69903978 | Msa0926350:intron | 25.0% |
| ! | AAAAACTCTAGATGAGAAAA+AGG | - | chr6_2:69904145-69904164 | Msa0926350:intron | 25.0% |
| !! | TGTATTTTCTTCAGATAGAT+AGG | + | chr6_2:69904170-69904189 | Msa0926340:intron | 25.0% |
| !! | AAACTTTTACATGGAAGAAA+AGG | + | chr6_2:69904241-69904260 | Msa0926340:CDS | 25.0% |
| !! | AACTTTTACATGGAAGAAAA+GGG | + | chr6_2:69904242-69904261 | Msa0926340:CDS | 25.0% |
| !!! | ATATCGTTTTTGGAATACAA+AGG | + | chr6_2:69904374-69904393 | Msa0926340:three_prime_UTR | 25.0% |
| TCTTACATCACAAAAACACA+AGG | - | chr6_2:69898578-69898597 | None:intergenic | 30.0% | |
| ! | TCAAAATTCTCTTCTCCTTT+TGG | + | chr6_2:69898698-69898717 | Msa0926340:CDS | 30.0% |
| CACACACACACATATATATA+TGG | + | chr6_2:69898931-69898950 | Msa0926340:intron | 30.0% | |
| !! | AAAGACACCAACTTACTTTT+AGG | + | chr6_2:69899018-69899037 | Msa0926340:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr6_2:69899070-69899089 | Msa0926340:intron | 30.0% | |
| ! | TTTTATCAAGTCACACCTTA+AGG | - | chr6_2:69899088-69899107 | None:intergenic | 30.0% |
| TACGAATAAGAGTTTCACAT+TGG | + | chr6_2:69899541-69899560 | Msa0926340:intron | 30.0% | |
| AATAAGAGTTTCACATTGGA+TGG | + | chr6_2:69899545-69899564 | Msa0926340:intron | 30.0% | |
| ! | GAATTTTATGTTCAATGTGC+AGG | + | chr6_2:69899700-69899719 | Msa0926340:intron | 30.0% |
| !!! | ATTTGCTTAGTCTTAGCTTT+TGG | + | chr6_2:69899731-69899750 | Msa0926340:CDS | 30.0% |
| !!! | TTTGCTTAGTCTTAGCTTTT+GGG | + | chr6_2:69899732-69899751 | Msa0926340:CDS | 30.0% |
| ! | TGTTGTGTCCATAAGAATTT+TGG | + | chr6_2:69899988-69900007 | Msa0926340:intron | 30.0% |
| ! | GTTGTGTCCATAAGAATTTT+GGG | + | chr6_2:69899989-69900008 | Msa0926340:intron | 30.0% |
| ! | TTGTGTCCATAAGAATTTTG+GGG | + | chr6_2:69899990-69900009 | Msa0926340:intron | 30.0% |
| !!! | GGCATAATTACTGTTACTTT+TGG | - | chr6_2:69900140-69900159 | None:intergenic | 30.0% |
| AACAGTAATTATGCCTCTAA+AGG | + | chr6_2:69900145-69900164 | Msa0926340:CDS | 30.0% | |
| ACAGTAATTATGCCTCTAAA+GGG | + | chr6_2:69900146-69900165 | Msa0926340:CDS | 30.0% | |
| ATGCAGTTAACATCTCTATA+TGG | + | chr6_2:69900295-69900314 | Msa0926340:intron | 30.0% | |
| ATAGTAATCTTGATACAGCA+TGG | - | chr6_2:69900372-69900391 | None:intergenic | 30.0% | |
| GTCATACTATATATGAAACC+TGG | + | chr6_2:69900621-69900640 | Msa0926340:intron | 30.0% | |
| TCAACAGGAATGAAAATACT+TGG | - | chr6_2:69900931-69900950 | None:intergenic | 30.0% | |
| TGACAAAGCAATTAATCAAC+AGG | - | chr6_2:69900946-69900965 | None:intergenic | 30.0% | |
| !! | ATATTTGCTGTCTTTATCCA+TGG | - | chr6_2:69901040-69901059 | None:intergenic | 30.0% |
| TGCCTTAAAAATTCGAAATC+CGG | + | chr6_2:69901144-69901163 | Msa0926340:intron | 30.0% | |
| ! | ATCCGGATTTCGAATTTTTA+AGG | - | chr6_2:69901149-69901168 | None:intergenic | 30.0% |
| TAAAAATTCGAAATCCGGAT+TGG | + | chr6_2:69901149-69901168 | Msa0926340:intron | 30.0% | |
| ! | TTTTTCTTTGATAAGCGAGT+TGG | - | chr6_2:69901236-69901255 | None:intergenic | 30.0% |
| ATTTACCATCTGGAAGTTTA+GGG | + | chr6_2:69901440-69901459 | Msa0926340:CDS | 30.0% | |
| TTGCATCTATGAATACCATA+TGG | + | chr6_2:69901468-69901487 | Msa0926340:CDS | 30.0% | |
| TTAGAGAGACATAAATCTAG+AGG | - | chr6_2:69901504-69901523 | None:intergenic | 30.0% | |
| TTATGTCTCTCTAATGATCA+TGG | + | chr6_2:69901510-69901529 | Msa0926340:intron | 30.0% | |
| TCATAAGACACTGTCAATAA+TGG | - | chr6_2:69901643-69901662 | None:intergenic | 30.0% | |
| ! | TTTGATAACCATGATCTTGA+TGG | + | chr6_2:69901714-69901733 | Msa0926340:intron | 30.0% |
| ! | TGGAAAAACCTTCTTTTTGT+GGG | + | chr6_2:69901829-69901848 | Msa0926340:CDS | 30.0% |
| GACTTTATGCAAGATAATTG+TGG | + | chr6_2:69901955-69901974 | Msa0926340:CDS | 30.0% | |
| AGTACACACATATTTGATCA+CGG | - | chr6_2:69902199-69902218 | None:intergenic | 30.0% | |
| AAATTAAGATCAGTTGCAAG+CGG | - | chr6_2:69902337-69902356 | None:intergenic | 30.0% | |
| ! | CTTGCAACTGATCTTAATTT+TGG | + | chr6_2:69902337-69902356 | Msa0926340:CDS | 30.0% |
| ! | CAACTGATCTTAATTTTGGA+AGG | + | chr6_2:69902341-69902360 | Msa0926340:CDS | 30.0% |
| ! | GAGGAAACAAACATTTGTTT+TGG | + | chr6_2:69902454-69902473 | Msa0926340:CDS | 30.0% |
| GTTTGTATTGCCATACATTA+TGG | + | chr6_2:69902550-69902569 | Msa0926340:CDS | 30.0% | |
| CATAGTAGTCATTCTGTAAA+TGG | + | chr6_2:69902759-69902778 | Msa0926340:intron | 30.0% | |
| ! | GTATTTGCTTTCTTTTGAAC+CGG | + | chr6_2:69902846-69902865 | Msa0926340:intron | 30.0% |
| ! | TATTTGCTTTCTTTTGAACC+GGG | + | chr6_2:69902847-69902866 | Msa0926340:intron | 30.0% |
| TAGTTAACAATAGAAAGAGG+AGG | - | chr6_2:69903076-69903095 | None:intergenic | 30.0% | |
| TTTCATATTGAGGGTCTATT+TGG | - | chr6_2:69903586-69903605 | None:intergenic | 30.0% | |
| AGAAATACACATTTACTAGG+TGG | + | chr6_2:69903701-69903720 | Msa0926340:intron | 30.0% | |
| TCTCAATCTATTAATTGGTC+TGG | + | chr6_2:69903830-69903849 | Msa0926340:CDS | 30.0% | |
| GAAAAATGGAAAAATCTGCA+AGG | + | chr6_2:69903868-69903887 | Msa0926340:CDS | 30.0% | |
| TACAATCAAAGAGAGAATGT+AGG | + | chr6_2:69904001-69904020 | Msa0926340:intron | 30.0% | |
| TTCATTGTCCAAGAAATACA+CGG | + | chr6_2:69904291-69904310 | Msa0926340:CDS | 30.0% | |
| TGTAGTTATTCAGATCTCTT+GGG | - | chr6_2:69904328-69904347 | Msa0926350:three_prime_UTR | 30.0% | |
| TTGTAGTTATTCAGATCTCT+TGG | - | chr6_2:69904329-69904348 | Msa0926350:three_prime_UTR | 30.0% | |
| ! | TAGCGAAACAATATCGTTTT+TGG | + | chr6_2:69904364-69904383 | Msa0926340:three_prime_UTR | 30.0% |
| ! | ATTTTGAGCTGAGAGAAAAG+AGG | - | chr6_2:69898685-69898704 | None:intergenic | 35.0% |
| !! | ACACCAACTTACTTTTAGGA+AGG | + | chr6_2:69899022-69899041 | Msa0926340:intron | 35.0% |
| ACACCTTCCTAAAAGTAAGT+TGG | - | chr6_2:69899028-69899047 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr6_2:69899099-69899118 | Msa0926340:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr6_2:69899100-69899119 | Msa0926340:intron | 35.0% | |
| ! | ATTTTACGATCGTTCCTTAG+AGG | - | chr6_2:69899432-69899451 | None:intergenic | 35.0% |
| TTTCACATTGGATGGAAAAG+TGG | + | chr6_2:69899553-69899572 | Msa0926340:intron | 35.0% | |
| !! | GTTTTGAGCAACTACACAAA+TGG | - | chr6_2:69899656-69899675 | None:intergenic | 35.0% |
| ! | AAAGTGCCCCAAAATTCTTA+TGG | - | chr6_2:69899999-69900018 | None:intergenic | 35.0% |
| ! | ATAAGGAGAAGTATGCAGAA+TGG | + | chr6_2:69900050-69900069 | Msa0926340:CDS | 35.0% |
| ! | TTTTGGCAAATTGACCTGAT+TGG | - | chr6_2:69900123-69900142 | None:intergenic | 35.0% |
| ! | CAGTAATTATGCCTCTAAAG+GGG | + | chr6_2:69900147-69900166 | Msa0926340:CDS | 35.0% |
| GTGAACACAATCTCCATAAT+TGG | + | chr6_2:69900174-69900193 | Msa0926340:CDS | 35.0% | |
| AACACAATCTCCATAATTGG+AGG | + | chr6_2:69900177-69900196 | Msa0926340:CDS | 35.0% | |
| CAGTTAACATCTCTATATGG+TGG | + | chr6_2:69900298-69900317 | Msa0926340:intron | 35.0% | |
| !! | AATAGTATTGGCAATTGAGC+AGG | + | chr6_2:69901002-69901021 | Msa0926340:intron | 35.0% |
| !!! | GAATTTTTAAGGCATACCTC+AGG | - | chr6_2:69901138-69901157 | None:intergenic | 35.0% |
| TATCCTCTTGATTTACCATC+TGG | + | chr6_2:69901430-69901449 | Msa0926340:CDS | 35.0% | |
| GATTTACCATCTGGAAGTTT+AGG | + | chr6_2:69901439-69901458 | Msa0926340:CDS | 35.0% | |
| AGAGACATAAATCTAGAGGT+AGG | - | chr6_2:69901500-69901519 | None:intergenic | 35.0% | |
| TATGGAATCGAGATATGGAT+CGG | - | chr6_2:69901557-69901576 | None:intergenic | 35.0% | |
| TTGAGTATGGAATCGAGATA+TGG | - | chr6_2:69901562-69901581 | None:intergenic | 35.0% | |
| TCGAGATTGAAATCGTGAAT+TGG | - | chr6_2:69901694-69901713 | None:intergenic | 35.0% | |
| TATAGTAGCCATCAAGATCA+TGG | - | chr6_2:69901725-69901744 | None:intergenic | 35.0% | |
| ! | GTGGAAAAACCTTCTTTTTG+TGG | + | chr6_2:69901828-69901847 | Msa0926340:CDS | 35.0% |
| ! | GGAAAAACCTTCTTTTTGTG+GGG | + | chr6_2:69901830-69901849 | Msa0926340:CDS | 35.0% |
| TATCAATTACTCACCAGCTA+TGG | - | chr6_2:69902034-69902053 | None:intergenic | 35.0% | |
| ACATATTTGATCACGGAGTT+TGG | - | chr6_2:69902192-69902211 | None:intergenic | 35.0% | |
| ! | CTTTTTATGAGCTCCTGTAA+AGG | - | chr6_2:69902278-69902297 | None:intergenic | 35.0% |
| AATTAAGATCAGTTGCAAGC+GGG | - | chr6_2:69902336-69902355 | None:intergenic | 35.0% | |
| !! | ACAGGTACTGGAATTATTTG+AGG | + | chr6_2:69902435-69902454 | Msa0926340:intron | 35.0% |
| CCATGACAAATAACAGTGAA+CGG | - | chr6_2:69902528-69902547 | None:intergenic | 35.0% | |
| ! | CGTTCACTGTTATTTGTCAT+GGG | + | chr6_2:69902526-69902545 | Msa0926340:CDS | 35.0% |
| ! | GTTCACTGTTATTTGTCATG+GGG | + | chr6_2:69902527-69902546 | Msa0926340:CDS | 35.0% |
| ! | TTCACTGTTATTTGTCATGG+GGG | + | chr6_2:69902528-69902547 | Msa0926340:CDS | 35.0% |
| ATTGCCATACATTATGGCAA+TGG | + | chr6_2:69902556-69902575 | Msa0926340:CDS | 35.0% | |
| TGAACCATTGCCATAATGTA+TGG | - | chr6_2:69902563-69902582 | None:intergenic | 35.0% | |
| AGCACTACAGTTTCACTATA+AGG | + | chr6_2:69902592-69902611 | Msa0926340:CDS | 35.0% | |
| GCACTACAGTTTCACTATAA+GGG | + | chr6_2:69902593-69902612 | Msa0926340:CDS | 35.0% | |
| !! | CAAGTTTTGATCACTGAGTT+CGG | - | chr6_2:69902803-69902822 | None:intergenic | 35.0% |
| CTATCAGATACCTATGATTC+AGG | + | chr6_2:69902878-69902897 | Msa0926340:intron | 35.0% | |
| GCATGTTATTCCTGAATCAT+AGG | - | chr6_2:69902891-69902910 | None:intergenic | 35.0% | |
| TGTAAAACCTAGGATAGAGT+AGG | - | chr6_2:69902927-69902946 | None:intergenic | 35.0% | |
| GAAGGAAAACTGTAAAACCT+AGG | - | chr6_2:69902937-69902956 | None:intergenic | 35.0% | |
| ! | TTTACAGTTTTCCTTCTCTC+AGG | + | chr6_2:69902941-69902960 | Msa0926340:intron | 35.0% |
| ! | TTACAGTTTTCCTTCTCTCA+GGG | + | chr6_2:69902942-69902961 | Msa0926340:intron | 35.0% |
| TTCTTGAGCTTCTTTCAATG+TGG | + | chr6_2:69902999-69903018 | Msa0926340:CDS | 35.0% | |
| TTTCAATGTGGAACTTGACA+AGG | + | chr6_2:69903011-69903030 | Msa0926340:CDS | 35.0% | |
| AGAAACTGAAGCATGATACA+TGG | + | chr6_2:69903265-69903284 | Msa0926340:intron | 35.0% | |
| TAGTTTATCCAAACAAGGCA+TGG | - | chr6_2:69903338-69903357 | None:intergenic | 35.0% | |
| TTTGCAGCTTATAGCATAAG+CGG | + | chr6_2:69903362-69903381 | Msa0926340:intron | 35.0% | |
| GAGAACGAATTGCAGATATA+GGG | - | chr6_2:69903805-69903824 | Msa0926350:three_prime_UTR | 35.0% | |
| TGAGAACGAATTGCAGATAT+AGG | - | chr6_2:69903806-69903825 | Msa0926350:three_prime_UTR | 35.0% | |
| GAAAAATCTGCAAGGTAAGT+TGG | + | chr6_2:69903876-69903895 | Msa0926340:intron | 35.0% | |
| ! | TTGGCTGGAAAACTTTTACA+TGG | + | chr6_2:69904232-69904251 | Msa0926340:CDS | 35.0% |
| AGAAAAGGGTTTCCTTCAAA+AGG | + | chr6_2:69904256-69904275 | Msa0926340:CDS | 35.0% | |
| ATTTCTTGGACAATGAACTG+AGG | - | chr6_2:69904288-69904307 | Msa0926350:three_prime_UTR | 35.0% | |
| ATACAAAGGCTTAAGTGAGT+TGG | + | chr6_2:69904388-69904407 | Msa0926340:three_prime_UTR | 35.0% | |
| TACAAAGGCTTAAGTGAGTT+GGG | + | chr6_2:69904389-69904408 | Msa0926340:three_prime_UTR | 35.0% | |
| GAATCAAGAGAGTCTAAGGA+AGG | - | chr6_2:69898659-69898678 | None:intergenic | 40.0% | |
| GAAGGAATCAAGAGAGTCTA+AGG | - | chr6_2:69898663-69898682 | None:intergenic | 40.0% | |
| TTATGTTACAAGCCACCCTT+TGG | - | chr6_2:69899118-69899137 | None:intergenic | 40.0% | |
| TGTGTGTATGTATGTACGTG+TGG | + | chr6_2:69899325-69899344 | Msa0926340:intron | 40.0% | |
| AAAACCTAGACGTGTTTCAG+TGG | + | chr6_2:69899365-69899384 | Msa0926340:intron | 40.0% | |
| !!! | CTTAGTCTTAGCTTTTGGGT+GGG | + | chr6_2:69899736-69899755 | Msa0926340:CDS | 40.0% |
| CGTTAAACACCAACACATGT+CGG | + | chr6_2:69899894-69899913 | Msa0926340:intron | 40.0% | |
| ACTATTTAGCACCAACACCT+CGG | - | chr6_2:69899933-69899952 | None:intergenic | 40.0% | |
| !!! | GGGGCACTTTTTTGTCTTAT+AGG | + | chr6_2:69900009-69900028 | Msa0926340:intron | 40.0% |
| TGAACTTGAGCATTCCAATC+AGG | + | chr6_2:69900106-69900125 | Msa0926340:CDS | 40.0% | |
| ! | ATTATGCCTCTAAAGGGGTT+TGG | + | chr6_2:69900152-69900171 | Msa0926340:CDS | 40.0% |
| ATACCTGAGTCCTCCAATTA+TGG | - | chr6_2:69900190-69900209 | None:intergenic | 40.0% | |
| ATATATGCAGGGTTCTGTAG+AGG | + | chr6_2:69900488-69900507 | Msa0926340:intron | 40.0% | |
| CCTAGATTCAAATCGCGAAT+CGG | - | chr6_2:69900830-69900849 | None:intergenic | 40.0% | |
| TGAGATGGAAAGAAATCCTG+AGG | + | chr6_2:69901119-69901138 | Msa0926340:CDS | 40.0% | |
| ! | CTGTGTGGAATTATTGACTG+CGG | - | chr6_2:69901175-69901194 | None:intergenic | 40.0% |
| AAATTCGGATTGTCTGCAGT+CGG | - | chr6_2:69901300-69901319 | None:intergenic | 40.0% | |
| CTTCCAGATGGTAAATCAAG+AGG | - | chr6_2:69901436-69901455 | None:intergenic | 40.0% | |
| TAACTCCCTAAACTTCCAGA+TGG | - | chr6_2:69901448-69901467 | None:intergenic | 40.0% | |
| AATCCTATTGAACAAGGCTG+TGG | - | chr6_2:69901800-69901819 | None:intergenic | 40.0% | |
| GTGGCAAATCCTATTGAACA+AGG | - | chr6_2:69901806-69901825 | None:intergenic | 40.0% | |
| TGTTCAATAGGATTTGCCAC+TGG | + | chr6_2:69901806-69901825 | Msa0926340:CDS | 40.0% | |
| ! | AAAGAAGGTTTTTCCACCAG+TGG | - | chr6_2:69901825-69901844 | None:intergenic | 40.0% |
| ! | AAAACCTTCTTTTTGTGGGG+AGG | + | chr6_2:69901833-69901852 | Msa0926340:CDS | 40.0% |
| GTAGTCTCAGAACTTCGAAA+TGG | + | chr6_2:69901979-69901998 | Msa0926340:CDS | 40.0% | |
| AGTTCAACATGTACAGGTAC+TGG | + | chr6_2:69902423-69902442 | Msa0926340:intron | 40.0% | |
| ! | CCGTTCACTGTTATTTGTCA+TGG | + | chr6_2:69902525-69902544 | Msa0926340:CDS | 40.0% |
| AATGGAGACGTAGACACAAT+TGG | + | chr6_2:69902777-69902796 | Msa0926340:intron | 40.0% | |
| TATCTGATAGCACAACATCC+CGG | - | chr6_2:69902868-69902887 | None:intergenic | 40.0% | |
| CTTGTTACCTACTCTATCCT+AGG | + | chr6_2:69902917-69902936 | Msa0926340:intron | 40.0% | |
| ! | AAGCTCAAGAAGAGTGCATA+TGG | - | chr6_2:69902990-69903009 | None:intergenic | 40.0% |
| CATGATACATGGACACAACA+AGG | + | chr6_2:69903276-69903295 | Msa0926340:intron | 40.0% | |
| GCAGGTATTCATTGCTATGT+TGG | + | chr6_2:69903763-69903782 | Msa0926340:intron | 40.0% | |
| GGTATTCATTGCTATGTTGG+TGG | + | chr6_2:69903766-69903785 | Msa0926340:intron | 40.0% | |
| AGATAGGACTCAACCAAACA+AGG | + | chr6_2:69904186-69904205 | Msa0926340:CDS | 40.0% | |
| GACTCAACCAAACAAGGATA+TGG | + | chr6_2:69904192-69904211 | Msa0926340:CDS | 40.0% | |
| TGTCCAAGAAATACACGGAA+TGG | + | chr6_2:69904296-69904315 | Msa0926340:CDS | 40.0% | |
| ! | TTAAGTGAGTTGGGTTTCGA+AGG | + | chr6_2:69904398-69904417 | Msa0926340:three_prime_UTR | 40.0% |
| CGTATATTGTATGCTCCTTG+AGG | - | chr6_2:69904450-69904469 | Msa0926350:three_prime_UTR | 40.0% | |
| TGAGCTGAGAGAAAAGAGGA+AGG | - | chr6_2:69898681-69898700 | None:intergenic | 45.0% | |
| GAGAGAGAGCAATGCAGAAA+TGG | - | chr6_2:69898752-69898771 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr6_2:69899103-69899122 | Msa0926340:intron | 45.0% | |
| CTTACCACTGAAACACGTCT+AGG | - | chr6_2:69899372-69899391 | None:intergenic | 45.0% | |
| !!! | GCTTAGTCTTAGCTTTTGGG+TGG | + | chr6_2:69899735-69899754 | Msa0926340:CDS | 45.0% |
| GTGTTTAACGTCGAGACATG+TGG | - | chr6_2:69899884-69899903 | None:intergenic | 45.0% | |
| TGTTCACCAAACCCCTTTAG+AGG | - | chr6_2:69900161-69900180 | None:intergenic | 45.0% | |
| TCTCCATAATTGGAGGACTC+AGG | + | chr6_2:69900184-69900203 | Msa0926340:CDS | 45.0% | |
| CTTGATACAGCATGGTAAGC+AGG | - | chr6_2:69900364-69900383 | None:intergenic | 45.0% | |
| ! | CCGATTCGCGATTTGAATCT+AGG | + | chr6_2:69900827-69900846 | Msa0926340:intron | 45.0% |
| ! | GTATTGGCAATTGAGCAGGT+TGG | + | chr6_2:69901006-69901025 | Msa0926340:intron | 45.0% |
| AGCCTACATCCTGGATCAAT+TGG | + | chr6_2:69901084-69901103 | Msa0926340:CDS | 45.0% | |
| CACCAATTGATCCAGGATGT+AGG | - | chr6_2:69901089-69901108 | None:intergenic | 45.0% | |
| ! | ATTATTGACTGCGGCCAATC+CGG | - | chr6_2:69901166-69901185 | None:intergenic | 45.0% |
| ATTCACGCATTCAGTGGAGT+TGG | - | chr6_2:69901266-69901285 | None:intergenic | 45.0% | |
| TCATGCATTCACGCATTCAG+TGG | - | chr6_2:69901272-69901291 | None:intergenic | 45.0% | |
| AGAGGTAGGTGTGTACCATA+TGG | - | chr6_2:69901486-69901505 | None:intergenic | 45.0% | |
| !! | GTTCCACAGCCTTGTTCAAT+AGG | + | chr6_2:69901794-69901813 | Msa0926340:intron | 45.0% |
| TCAATAGGATTTGCCACTGG+TGG | + | chr6_2:69901809-69901828 | Msa0926340:CDS | 45.0% | |
| GTCTCAGAACTTCGAAATGG+TGG | + | chr6_2:69901982-69902001 | Msa0926340:CDS | 45.0% | |
| TACCGCGATCACTTTACAGT+CGG | + | chr6_2:69902148-69902167 | Msa0926340:intron | 45.0% | |
| CACTTTACAGTCGGAGACTT+TGG | + | chr6_2:69902157-69902176 | Msa0926340:intron | 45.0% | |
| GTCGGAGACTTTGGCAAAAT+TGG | + | chr6_2:69902166-69902185 | Msa0926340:intron | 45.0% | |
| CTATAAGGGTTACTCAGTCG+AGG | + | chr6_2:69902607-69902626 | Msa0926340:CDS | 45.0% | |
| GAGGAAATTGCCTACACTTC+TGG | + | chr6_2:69902626-69902645 | Msa0926340:CDS | 45.0% | |
| GAAATTGCCTACACTTCTGG+TGG | + | chr6_2:69902629-69902648 | Msa0926340:CDS | 45.0% | |
| ! | ATTCTCACCACCAGAAGTGT+AGG | - | chr6_2:69902639-69902658 | None:intergenic | 45.0% |
| TAGAAAGAGGAGGTTCCTCT+GGG | - | chr6_2:69903066-69903085 | None:intergenic | 45.0% | |
| ATAGAAAGAGGAGGTTCCTC+TGG | - | chr6_2:69903067-69903086 | None:intergenic | 45.0% | |
| ! | TCAAGTTGCCATGCCTTGTT+TGG | + | chr6_2:69903327-69903346 | Msa0926340:intron | 45.0% |
| !! | TCTGCAAGGTAAGTTGGTCA+AGG | + | chr6_2:69903882-69903901 | Msa0926340:intron | 45.0% |
| ACTGGAGCCATATCCTTGTT+TGG | - | chr6_2:69904202-69904221 | Msa0926350:three_prime_UTR | 45.0% | |
| TTGGACAATGAACTGAGGAG+TGG | - | chr6_2:69904283-69904302 | Msa0926350:three_prime_UTR | 45.0% | |
| ACGCCATTCCGTGTATTTCT+TGG | - | chr6_2:69904302-69904321 | Msa0926350:three_prime_UTR | 45.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr6_2:69899115-69899134 | None:intergenic | 50.0% | |
| ATGCCCTAAATCCGAGGTGT+TGG | + | chr6_2:69899919-69899938 | Msa0926340:intron | 50.0% | |
| GCACCAACACCTCGGATTTA+GGG | - | chr6_2:69899925-69899944 | None:intergenic | 50.0% | |
| AGCACCAACACCTCGGATTT+AGG | - | chr6_2:69899926-69899945 | None:intergenic | 50.0% | |
| GAGGCTAGGGTAATTGTAGC+TGG | + | chr6_2:69900507-69900526 | Msa0926340:CDS | 50.0% | |
| GATGATGTGAGCCTACATCC+TGG | + | chr6_2:69901075-69901094 | Msa0926340:CDS | 50.0% | |
| GCAACCTCCCCACAAAAAGA+AGG | - | chr6_2:69901840-69901859 | None:intergenic | 50.0% | |
| TTTGTGGGGAGGTTGCATGA+TGG | + | chr6_2:69901844-69901863 | Msa0926340:CDS | 50.0% | |
| ATGACTCTTGCAGCCATAGC+TGG | + | chr6_2:69902018-69902037 | Msa0926340:CDS | 50.0% | |
| CTCCGACTGTAAAGTGATCG+CGG | - | chr6_2:69902153-69902172 | None:intergenic | 50.0% | |
| ATAGTGCGCGGTTCATCACA+CGG | - | chr6_2:69902502-69902521 | None:intergenic | 50.0% | |
| AGTGAACGGTGAATAGTGCG+CGG | - | chr6_2:69902514-69902533 | None:intergenic | 50.0% | |
| CCAGTGATAACCCTGAGAGA+AGG | - | chr6_2:69902955-69902974 | None:intergenic | 50.0% | |
| CCTTCTCTCAGGGTTATCAC+TGG | + | chr6_2:69902952-69902971 | Msa0926340:intron | 50.0% | |
| TTGCAACATGTTGTCCCCAG+AGG | + | chr6_2:69903048-69903067 | Msa0926340:CDS | 50.0% | |
| AGAAAGAGGAGGTTCCTCTG+GGG | - | chr6_2:69903065-69903084 | None:intergenic | 50.0% | |
| ! | GGCTCCAGTTTTCACAGACT+TGG | + | chr6_2:69904213-69904232 | Msa0926340:CDS | 50.0% |
| CCAGCCAAGTCTGTGAAAAC+TGG | - | chr6_2:69904220-69904239 | Msa0926350:three_prime_UTR | 50.0% | |
| ! | CCAGTTTTCACAGACTTGGC+TGG | + | chr6_2:69904217-69904236 | Msa0926340:CDS | 50.0% |
| ! | CTGAGGAGTGGTCCTTTTGA+AGG | - | chr6_2:69904271-69904290 | Msa0926350:three_prime_UTR | 50.0% |
| AGGGCATGTCCGACATGTGT+TGG | - | chr6_2:69899906-69899925 | None:intergenic | 55.0% | |
| TCGGACATGCCCTAAATCCG+AGG | + | chr6_2:69899913-69899932 | Msa0926340:intron | 55.0% | |
| TGCAGGGTTCTGTAGAGGCT+AGG | + | chr6_2:69900493-69900512 | Msa0926340:intron | 55.0% | |
| GCAGGGTTCTGTAGAGGCTA+GGG | + | chr6_2:69900494-69900513 | Msa0926340:intron | 55.0% | |
| ! | GGCAATTGAGCAGGTTGGAG+TGG | + | chr6_2:69901011-69901030 | Msa0926340:intron | 55.0% |
| GCGAGTGCACCAATTGATCC+AGG | - | chr6_2:69901096-69901115 | None:intergenic | 55.0% | |
| !! | CCATCGATGTGCTGACTGTG+TGG | - | chr6_2:69901190-69901209 | None:intergenic | 55.0% |
| CCACACAGTCAGCACATCGA+TGG | + | chr6_2:69901187-69901206 | Msa0926340:intron | 55.0% | |
| TGAGGAAAGACAGCGACTGG+CGG | - | chr6_2:69902313-69902332 | None:intergenic | 55.0% | |
| AGATCAGTTGCAAGCGGGTG+AGG | - | chr6_2:69902331-69902350 | None:intergenic | 55.0% | |
| TTGGGTTTCGAAGGCTCGTC+AGG | + | chr6_2:69904407-69904426 | Msa0926340:three_prime_UTR | 55.0% | |
| TGGGTTTCGAAGGCTCGTCA+GGG | + | chr6_2:69904408-69904427 | Msa0926340:three_prime_UTR | 55.0% | |
| ATGCTCCTTGAGGTCTGCCT+TGG | - | chr6_2:69904440-69904459 | Msa0926350:three_prime_UTR | 55.0% | |
| GGGCTTCAGCTGCTTGTGTC+AGG | + | chr6_2:69899756-69899775 | Msa0926340:CDS | 60.0% | |
| ! | GCAGGTTGGAGTGGAGACCA+TGG | + | chr6_2:69901020-69901039 | Msa0926340:intron | 60.0% |
| TGGTGCACTCGCTCGTGAGA+TGG | + | chr6_2:69901104-69901123 | Msa0926340:CDS | 60.0% | |
| GGGTGAGGAAAGACAGCGAC+TGG | - | chr6_2:69902316-69902335 | None:intergenic | 60.0% | |
| CTTGAGGTCTGCCTTGGTCC+TGG | - | chr6_2:69904434-69904453 | Msa0926350:three_prime_UTR | 60.0% | |
| CAGGACCAAGGCAGACCTCA+AGG | + | chr6_2:69904432-69904451 | Msa0926340:three_prime_UTR | 60.0% | |
| TTCGAAGGCTCGTCAGGGCC+AGG | + | chr6_2:69904413-69904432 | Msa0926340:three_prime_UTR | 65.0% | |
| GCTCGTCAGGGCCAGGACCA+AGG | + | chr6_2:69904420-69904439 | Msa0926340:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 69898440 | 69904490 | 69898440 | ID=Msa0926340;Name=Msa0926340 |
| chr6_2 | mRNA | 69898440 | 69904490 | 69898440 | ID=Msa0926340-mRNA-1;Parent=Msa0926340;Name=Msa0926340-mRNA-1;_AED=0.14;_eAED=0.14;_QI=213|1|1|1|1|1|14|148|521 |
| chr6_2 | exon | 69898440 | 69898739 | 69898440 | ID=Msa0926340-mRNA-1:exon:11441;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69899722 | 69899777 | 69899722 | ID=Msa0926340-mRNA-1:exon:11442;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69900031 | 69900205 | 69900031 | ID=Msa0926340-mRNA-1:exon:11443;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69900301 | 69900402 | 69900301 | ID=Msa0926340-mRNA-1:exon:11444;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69900498 | 69900569 | 69900498 | ID=Msa0926340-mRNA-1:exon:11445;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69901024 | 69901140 | 69901024 | ID=Msa0926340-mRNA-1:exon:11446;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69901412 | 69901489 | 69901412 | ID=Msa0926340-mRNA-1:exon:11447;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69901803 | 69901865 | 69901803 | ID=Msa0926340-mRNA-1:exon:11448;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69901943 | 69902039 | 69901943 | ID=Msa0926340-mRNA-1:exon:11449;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69902284 | 69902362 | 69902284 | ID=Msa0926340-mRNA-1:exon:11450;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69902439 | 69902650 | 69902439 | ID=Msa0926340-mRNA-1:exon:11451;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69902963 | 69903108 | 69902963 | ID=Msa0926340-mRNA-1:exon:11452;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69903767 | 69903889 | 69903767 | ID=Msa0926340-mRNA-1:exon:11453;Parent=Msa0926340-mRNA-1 |
| chr6_2 | exon | 69904184 | 69904490 | 69904184 | ID=Msa0926340-mRNA-1:exon:11454;Parent=Msa0926340-mRNA-1 |
| chr6_2 | five_prime_UTR | 69898440 | 69898652 | 69898440 | ID=Msa0926340-mRNA-1:five_prime_utr;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69898653 | 69898739 | 69898653 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69899722 | 69899777 | 69899722 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69900031 | 69900205 | 69900031 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69900301 | 69900402 | 69900301 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69900498 | 69900569 | 69900498 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69901024 | 69901140 | 69901024 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69901412 | 69901489 | 69901412 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69901803 | 69901865 | 69901803 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69901943 | 69902039 | 69901943 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69902284 | 69902362 | 69902284 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69902439 | 69902650 | 69902439 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69902963 | 69903108 | 69902963 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69903767 | 69903889 | 69903767 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | CDS | 69904184 | 69904342 | 69904184 | ID=Msa0926340-mRNA-1:cds;Parent=Msa0926340-mRNA-1 |
| chr6_2 | three_prime_UTR | 69904343 | 69904490 | 69904343 | ID=Msa0926340-mRNA-1:three_prime_utr;Parent=Msa0926340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
