AlfalfaGEDB | Msa0339980

M. sativa cultivar zhongmu-4 / Msa0339980

KEGG: K09422
GO: GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009832 GO:0009834 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0042221 GO:0042493 GO:0042546 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044087 GO:0044089 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901348 GO:1901363 GO:1901700 GO:1902680 GO:1903338 GO:1903340 GO:1903506 GO:1903508 GO:2000112 GO:2000652 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0339980	XP_003597423.2	92.966	327	11	6	1	323	1	319	0.0	571

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0339980	sp\|Q9LXV2\|MYB46_ARATH	44.848	330	118	11	1	322	1	274	1.94e-73	231

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification
Msa0339980	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0094850	Msa0339980	0.806530	7.868031e-50	-8.615850e-47
Msa0118570	Msa0339980	0.815622	8.411692e-52	-8.615850e-47
Msa0206840	Msa0339980	0.806795	6.914563e-50	-8.615850e-47
Msa0223490	Msa0339980	0.951971	6.588531e-110	-8.615850e-47
Msa0243600	Msa0339980	0.812728	3.663616e-51	-8.615850e-47
Msa0264590	Msa0339980	0.979040	4.200451e-147	-8.615850e-47
Msa0295020	Msa0339980	0.934666	2.834906e-96	-8.615850e-47
Msa0300180	Msa0339980	0.821260	4.438090e-53	-8.615850e-47
Msa0319940	Msa0339980	0.808625	2.825572e-50	-8.615850e-47
Msa0337540	Msa0339980	0.820113	8.144010e-53	-8.615850e-47
Msa0339980	Msa0548620	0.837402	5.309818e-57	-8.615850e-47
Msa0339980	Msa0548660	0.813872	2.054037e-51	-8.615850e-47
Msa0339980	Msa0629600	0.802556	5.305586e-49	-8.615850e-47
Msa0339980	Msa0644980	0.812575	3.957469e-51	-8.615850e-47
Msa0339980	Msa0650070	0.825307	5.034767e-54	-8.615850e-47
Msa0339980	Msa0667370	0.808767	2.634606e-50	-8.615850e-47
Msa0339980	Msa0684500	0.829211	5.844063e-55	-8.615850e-47
Msa0339980	Msa0692060	0.811804	5.827318e-51	-8.615850e-47
Msa0339980	Msa0926340	0.822378	2.446549e-53	-8.615850e-47
Msa0339980	Msa1024740	0.808050	3.746489e-50	-8.615850e-47
Msa0339980	Msa1031930	0.804146	2.484605e-49	-8.615850e-47
Msa0339980	Msa1063500	0.802397	5.719621e-49	-8.615850e-47
Msa0339980	Msa1152510	0.817137	3.854326e-52	-8.615850e-47
Msa0339980	Msa1442820	0.807183	5.724294e-50	-8.615850e-47
Msa0339980	Msa1465010	0.802004	6.889989e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0339980	MtrunA17_Chr2g0328771	92.966	327	11	6	1	323	1	319	0.0	571
Msa0339980	MtrunA17_Chr4g0032401	57.386	352	95	14	1	322	1	327	2.94e-113	331
Msa0339980	MtrunA17_Chr3g0088461	45.455	341	158	9	1	320	3	336	1.07e-76	238
Msa0339980	MtrunA17_Chr1g0193371	78.899	109	23	0	18	126	9	117	2.66e-61	199
Msa0339980	MtrunA17_Chr4g0058631	77.778	108	24	0	18	125	9	116	5.57e-59	193
Msa0339980	MtrunA17_Chr7g0270891	76.147	109	26	0	18	126	9	117	1.06e-58	192
Msa0339980	MtrunA17_Chr3g0117091	52.604	192	88	2	18	208	9	198	1.60e-58	192
Msa0339980	MtrunA17_Chr1g0211161	75.926	108	26	0	18	125	10	117	7.33e-58	186
Msa0339980	MtrunA17_Chr1g0193801	74.312	109	28	0	18	126	9	117	1.24e-57	191
Msa0339980	MtrunA17_Chr2g0330041	73.394	109	29	0	17	125	8	116	1.84e-57	190
Msa0339980	MtrunA17_Chr8g0342541	71.560	109	31	0	17	125	8	116	1.88e-56	186
Msa0339980	MtrunA17_Chr8g0342521	72.477	109	30	0	17	125	8	116	3.89e-56	185
Msa0339980	MtrunA17_Chr7g0271241	80.198	101	20	0	18	118	9	109	4.49e-56	186
Msa0339980	MtrunA17_Chr8g0387421	66.364	110	37	0	17	126	8	117	2.53e-53	177
Msa0339980	MtrunA17_Chr8g0342481	44.907	216	85	6	17	231	8	190	7.19e-53	178
Msa0339980	MtrunA17_Chr1g0203441	70.370	108	32	0	18	125	10	117	4.78e-52	172
Msa0339980	MtrunA17_Chr2g0309911	66.055	109	37	0	17	125	7	115	1.21e-51	173
Msa0339980	MtrunA17_Chr5g0435101	60.000	125	40	2	1	125	1	115	4.57e-51	168
Msa0339980	MtrunA17_Chr3g0131121	56.934	137	49	1	18	144	9	145	8.44e-51	170
Msa0339980	MtrunA17_Chr5g0397231	66.990	103	34	0	17	119	8	110	9.24e-51	171
Msa0339980	MtrunA17_Chr6g0470971	58.462	130	51	1	16	142	9	138	1.34e-49	166
Msa0339980	MtrunA17_Chr2g0281071	58.462	130	47	1	7	136	6	128	2.96e-49	167
Msa0339980	MtrunA17_Chr8g0385321	61.538	117	45	0	18	134	9	125	3.40e-49	166
Msa0339980	MtrunA17_Chr5g0434571	41.935	217	93	5	17	203	44	257	4.88e-49	167
Msa0339980	MtrunA17_Chr4g0048511	36.667	300	148	10	2	273	3	288	1.66e-48	166
Msa0339980	MtrunA17_Chr4g0037141	65.714	105	36	0	23	127	14	118	4.85e-48	162
Msa0339980	MtrunA17_Chr1g0203411	50.000	146	61	1	18	163	9	142	9.79e-48	162
Msa0339980	MtrunA17_Chr2g0323351	64.655	116	40	1	17	131	8	123	1.21e-47	160
Msa0339980	MtrunA17_Chr3g0115821	61.468	109	42	0	17	125	8	116	1.38e-47	163
Msa0339980	MtrunA17_Chr7g0217741	59.016	122	50	0	18	139	9	130	1.39e-47	162
Msa0339980	MtrunA17_Chr2g0323411	66.055	109	37	0	17	125	8	116	1.80e-47	162
Msa0339980	MtrunA17_Chr3g0110351	61.017	118	46	0	17	134	8	125	2.66e-47	161
Msa0339980	MtrunA17_Chr4g0044421	60.000	125	41	2	1	125	1	116	5.04e-47	157
Msa0339980	MtrunA17_Chr4g0042671	58.140	129	51	1	18	146	9	134	7.26e-47	163
Msa0339980	MtrunA17_Chr6g0453471	61.607	112	43	0	17	128	8	119	1.07e-46	161
Msa0339980	MtrunA17_Chr4g0057031	63.303	109	40	0	17	125	8	116	2.29e-46	158
Msa0339980	MtrunA17_Chr4g0070641	56.198	121	53	0	18	138	9	129	2.37e-46	154
Msa0339980	MtrunA17_Chr4g0070611	56.198	121	53	0	18	138	9	129	2.71e-46	159
Msa0339980	MtrunA17_Chr1g0167661	45.050	202	93	4	18	213	9	198	3.37e-46	157
Msa0339980	MtrunA17_Chr5g0410961	62.857	105	39	0	21	125	12	116	3.96e-46	159
Msa0339980	MtrunA17_Chr7g0274581	41.176	187	96	2	21	206	12	185	6.25e-46	154
Msa0339980	MtrunA17_Chr7g0228891	63.393	112	41	0	17	128	8	119	8.87e-46	156
Msa0339980	MtrunA17_Chr8g0349261	61.818	110	41	1	17	125	9	118	2.43e-45	156
Msa0339980	MtrunA17_Chr5g0395281	58.772	114	47	0	21	134	12	125	3.21e-45	156
Msa0339980	MtrunA17_Chr8g0343831	62.963	108	40	0	19	126	6	113	4.85e-45	154
Msa0339980	MtrunA17_Chr4g0039971	61.905	105	40	0	21	125	13	117	6.85e-45	156
Msa0339980	MtrunA17_Chr4g0055981	48.765	162	76	2	18	173	52	212	1.28e-44	152
Msa0339980	MtrunA17_Chr1g0187761	56.911	123	53	0	18	140	9	131	1.34e-44	153
Msa0339980	MtrunA17_Chr1g0167691	43.415	205	98	3	18	216	9	201	1.36e-44	152
Msa0339980	MtrunA17_Chr4g0022931	60.000	110	44	0	18	127	10	119	1.49e-44	153
Msa0339980	MtrunA17_Chr4g0022901	61.682	107	41	0	18	124	10	116	1.30e-43	150
Msa0339980	MtrunA17_Chr6g0452271	49.254	134	59	1	1	134	1	125	1.75e-43	152
Msa0339980	MtrunA17_Chr3g0103281	55.556	117	52	0	18	134	9	125	2.00e-43	152
Msa0339980	MtrunA17_Chr7g0275911	58.559	111	46	0	17	127	8	118	4.96e-43	149
Msa0339980	MtrunA17_Chr8g0346561	52.381	126	60	0	18	143	9	134	1.05e-42	149
Msa0339980	MtrunA17_Chr1g0194951	58.120	117	49	0	18	134	9	125	1.29e-42	150
Msa0339980	MtrunA17_Chr3g0121241	58.182	110	46	0	18	127	39	148	2.28e-42	148
Msa0339980	MtrunA17_Chr4g0022911	60.577	104	41	0	21	124	13	116	4.98e-42	147
Msa0339980	MtrunA17_Chr1g0209661	53.913	115	53	0	14	128	20	134	1.06e-41	147
Msa0339980	MtrunA17_Chr7g0261281	60.185	108	43	0	18	125	9	116	1.19e-41	145
Msa0339980	MtrunA17_Chr6g0450101	52.941	119	56	0	10	128	3	121	1.49e-41	143
Msa0339980	MtrunA17_Chr7g0228231	57.547	106	45	0	21	126	14	119	1.51e-41	143
Msa0339980	MtrunA17_Chr7g0217221	52.381	126	51	1	1	126	1	117	3.62e-41	144
Msa0339980	MtrunA17_Chr5g0417821	57.895	114	48	0	21	134	7	120	4.97e-41	144
Msa0339980	MtrunA17_Chr1g0151941	51.818	110	52	1	17	125	8	117	5.56e-41	143
Msa0339980	MtrunA17_Chr3g0099131	57.547	106	45	0	21	126	41	146	5.88e-41	149
Msa0339980	MtrunA17_Chr1g0168661	60.377	106	42	0	22	127	22	127	1.18e-40	142
Msa0339980	MtrunA17_Chr8g0354661	58.654	104	43	0	21	124	37	140	1.25e-40	149
Msa0339980	MtrunA17_Chr1g0194291	52.344	128	61	0	1	128	1	128	1.57e-40	142
Msa0339980	MtrunA17_Chr3g0092401	44.304	158	70	2	1	158	2	141	2.42e-40	143
Msa0339980	MtrunA17_Chr1g0186061	57.143	112	48	0	16	127	15	126	3.05e-40	141
Msa0339980	MtrunA17_Chr2g0311221	59.223	103	42	0	17	119	10	112	3.23e-40	143
Msa0339980	MtrunA17_Chr1g0194301	50.388	129	63	1	1	128	12	140	3.52e-40	142
Msa0339980	MtrunA17_Chr4g0060721	50.000	132	56	2	1	131	2	124	4.65e-40	143
Msa0339980	MtrunA17_Chr6g0453211	53.782	119	46	1	1	119	1	110	6.83e-40	142
Msa0339980	MtrunA17_Chr7g0254411	48.175	137	62	1	1	137	1	128	7.97e-40	142
Msa0339980	MtrunA17_Chr3g0080861	55.660	106	47	0	21	126	37	142	9.32e-40	146
Msa0339980	MtrunA17_Chr1g0180391	56.604	106	46	0	21	126	19	124	1.34e-39	139
Msa0339980	MtrunA17_Chr4g0022881	51.163	129	62	1	16	143	7	135	1.96e-39	139
Msa0339980	MtrunA17_Chr5g0400821	55.455	110	48	1	17	125	8	117	2.16e-39	140
Msa0339980	MtrunA17_Chr4g0028311	52.137	117	55	1	17	132	8	124	4.67e-39	140
Msa0339980	MtrunA17_Chr1g0154031	57.692	104	44	0	21	124	76	179	9.73e-39	141
Msa0339980	MtrunA17_Chr1g0152011	55.455	110	48	1	17	125	8	117	1.18e-38	139
Msa0339980	MtrunA17_Chr8g0342531	69.512	82	25	0	17	98	8	89	1.58e-38	134
Msa0339980	MtrunA17_Chr4g0022891	53.774	106	49	0	17	122	8	113	2.43e-38	136
Msa0339980	MtrunA17_Chr7g0269831	58.974	117	48	0	18	134	9	125	3.76e-38	139
Msa0339980	MtrunA17_Chr8g0342511	70.000	80	24	0	17	96	8	87	6.94e-38	130
Msa0339980	MtrunA17_Chr3g0135311	52.727	110	51	1	17	125	8	117	1.31e-37	137
Msa0339980	MtrunA17_Chr2g0322521	51.639	122	57	1	5	126	15	134	3.12e-37	137
Msa0339980	MtrunA17_Chr2g0327351	55.769	104	45	1	17	119	8	111	5.16e-37	135
Msa0339980	MtrunA17_Chr7g0264641	49.558	113	56	1	17	128	8	120	8.61e-37	133
Msa0339980	MtrunA17_Chr7g0247131	71.053	76	22	0	53	128	10	85	1.60e-36	132
Msa0339980	MtrunA17_Chr2g0293911	56.481	108	47	0	21	128	24	131	2.59e-36	133
Msa0339980	MtrunA17_Chr7g0240821	52.679	112	53	0	26	137	6	117	5.54e-36	129
Msa0339980	MtrunA17_Chr4g0068921	55.556	108	48	0	21	128	24	131	8.10e-36	128
Msa0339980	MtrunA17_Chr4g0068061	35.052	291	119	9	18	285	9	252	9.41e-36	132
Msa0339980	MtrunA17_Chr1g0192411	51.304	115	56	0	12	126	3	117	1.52e-35	132
Msa0339980	MtrunA17_Chr4g0054391	55.340	103	45	1	17	118	8	110	1.79e-35	130
Msa0339980	MtrunA17_Chr5g0434931	48.276	116	60	0	10	125	24	139	2.61e-35	129
Msa0339980	MtrunA17_Chr5g0434911	47.934	121	62	1	6	125	5	125	2.77e-35	129
Msa0339980	MtrunA17_Chr5g0434831	53.333	105	49	0	21	125	7	111	3.98e-35	126
Msa0339980	MtrunA17_Chr8g0342461	66.265	83	27	1	17	98	8	90	4.61e-35	124
Msa0339980	MtrunA17_Chr2g0327821	43.333	150	78	2	18	162	3	150	6.56e-35	127
Msa0339980	MtrunA17_Chr8g0342471	66.265	83	27	1	17	98	8	90	8.02e-35	124
Msa0339980	MtrunA17_Chr7g0220341	40.491	163	85	5	21	177	25	181	8.31e-35	127
Msa0339980	MtrunA17_Chr5g0440781	44.218	147	71	4	22	167	13	149	1.21e-34	125
Msa0339980	MtrunA17_Chr4g0072751	53.846	104	47	1	17	119	8	111	1.77e-34	129
Msa0339980	MtrunA17_Chr6g0487491	46.875	128	59	2	17	135	8	135	4.32e-34	125
Msa0339980	MtrunA17_Chr5g0440761	44.218	147	71	4	22	167	13	149	4.64e-34	125
Msa0339980	MtrunA17_Chr5g0441141	44.218	147	71	4	22	167	13	149	5.04e-34	125
Msa0339980	MtrunA17_Chr4g0030881	51.818	110	46	1	22	124	8	117	1.00e-33	124
Msa0339980	MtrunA17_Chr7g0228991	39.535	172	88	3	9	164	17	188	1.58e-33	124
Msa0339980	MtrunA17_Chr8g0360111	53.333	105	49	0	17	121	21	125	3.58e-33	123
Msa0339980	MtrunA17_Chr5g0434841	45.000	120	66	0	6	125	5	124	4.91e-33	124
Msa0339980	MtrunA17_Chr4g0042611	61.250	80	31	0	18	97	9	88	5.11e-33	117
Msa0339980	MtrunA17_Chr5g0395221	61.728	81	31	0	17	97	8	88	4.09e-31	112
Msa0339980	MtrunA17_Chr8g0334881	47.788	113	57	2	17	128	6	117	7.82e-31	118
Msa0339980	MtrunA17_Chr5g0441131	49.057	106	53	1	22	126	10	115	3.53e-30	113
Msa0339980	MtrunA17_Chr2g0323321	64.198	81	29	0	21	101	11	91	3.60e-30	110
Msa0339980	MtrunA17_Chr4g0013361	41.958	143	69	3	21	162	10	139	1.01e-29	115
Msa0339980	MtrunA17_Chr3g0099141	53.012	83	39	0	21	103	40	122	3.79e-29	108
Msa0339980	MtrunA17_Chr4g0053431	46.341	123	65	1	23	145	5	126	1.98e-28	110
Msa0339980	MtrunA17_Chr4g0008551	52.427	103	46	2	23	124	38	138	2.50e-28	112
Msa0339980	MtrunA17_Chr5g0401731	46.087	115	59	2	16	128	6	119	3.19e-28	111
Msa0339980	MtrunA17_Chr6g0454921	44.828	116	63	1	13	128	5	119	1.06e-27	107
Msa0339980	MtrunA17_Chr5g0429661	35.294	187	98	6	21	199	120	291	2.00e-27	110
Msa0339980	MtrunA17_Chr3g0133601	47.934	121	62	1	15	135	29	148	2.21e-27	107
Msa0339980	MtrunA17_Chr2g0294811	57.500	80	34	0	18	97	9	88	3.39e-27	103
Msa0339980	MtrunA17_Chr7g0238631	46.226	106	56	1	20	125	110	214	4.13e-26	108
Msa0339980	MtrunA17_Chr3g0139671	46.226	106	56	1	20	125	82	186	1.12e-25	107
Msa0339980	MtrunA17_Chr7g0229131	37.975	158	79	4	54	205	5	149	1.16e-25	100
Msa0339980	MtrunA17_Chr3g0117511	43.902	123	60	3	2	124	170	283	1.18e-25	106
Msa0339980	MtrunA17_Chr6g0460661	34.591	159	98	2	9	162	2	159	4.29e-25	99.0
Msa0339980	MtrunA17_Chr5g0434901	60.294	68	27	0	55	122	7	74	5.65e-25	97.4
Msa0339980	MtrunA17_Chr7g0229101	60.000	70	28	0	53	122	4	73	1.30e-24	99.0
Msa0339980	MtrunA17_Chr4g0058991	40.171	117	69	1	8	124	194	309	2.34e-24	102
Msa0339980	MtrunA17_Chr6g0460671	32.973	185	97	3	23	207	99	256	6.37e-24	100
Msa0339980	MtrunA17_Chr5g0437321	49.495	99	49	1	23	121	19	116	1.16e-23	98.6
Msa0339980	MtrunA17_Chr4g0042501	40.833	120	68	2	13	131	95	212	1.54e-23	100
Msa0339980	MtrunA17_Chr6g0480581	45.545	101	54	1	23	123	4	103	1.69e-23	97.1
Msa0339980	MtrunA17_Chr5g0425591	51.220	82	39	1	22	102	10	91	2.23e-23	92.4
Msa0339980	MtrunA17_Chr1g0157731	43.396	106	59	1	20	125	88	192	4.50e-23	100
Msa0339980	MtrunA17_Chr5g0417621	38.406	138	73	3	14	141	125	260	5.01e-23	99.0
Msa0339980	MtrunA17_Chr6g0453751	47.253	91	39	2	21	102	20	110	6.34e-22	89.7
Msa0339980	MtrunA17_Chr7g0228531	44.231	104	55	3	23	126	220	320	1.35e-21	94.7
Msa0339980	MtrunA17_Chr5g0397841	44.898	98	53	1	21	118	108	204	2.07e-21	94.4
Msa0339980	MtrunA17_Chr3g0093811	44.565	92	48	1	46	134	4	95	4.44e-21	90.9
Msa0339980	MtrunA17_Chr1g0177901	47.727	88	42	2	33	120	7	90	7.13e-21	89.0
Msa0339980	MtrunA17_Chr7g0228401	45.361	97	50	2	34	130	290	383	1.51e-20	92.0
Msa0339980	MtrunA17_Chr3g0125801	40.541	111	65	1	19	129	12	121	1.08e-19	87.4
Msa0339980	MtrunA17_Chr7g0254261	43.689	103	55	2	23	124	89	189	4.61e-19	86.7
Msa0339980	MtrunA17_Chr7g0228481	39.815	108	60	3	23	127	220	325	2.50e-18	85.1
Msa0339980	MtrunA17_Chr7g0233061	39.048	105	60	4	23	127	180	280	1.84e-17	82.0
Msa0339980	MtrunA17_Chr1g0193901	51.163	86	40	2	19	102	9	94	4.21e-17	75.9
Msa0339980	MtrunA17_Chr1g0193891	51.163	86	40	2	19	102	9	94	4.21e-17	75.9
Msa0339980	MtrunA17_Chr1g0193871	51.163	86	40	2	19	102	9	94	4.21e-17	75.9
Msa0339980	MtrunA17_Chr1g0193881	51.163	86	40	2	19	102	9	94	4.21e-17	75.9
Msa0339980	MtrunA17_Chr7g0238651	33.913	115	74	1	26	138	10	124	7.43e-17	80.5
Msa0339980	MtrunA17_Chr5g0416341	36.441	118	73	2	10	126	12	128	7.86e-17	80.9
Msa0339980	MtrunA17_Chr8g0362231	34.545	110	71	1	18	127	17	125	1.16e-14	74.3
Msa0339980	MtrunA17_Chr5g0434871	58.140	43	18	0	83	125	2	44	1.25e-13	65.1
Msa0339980	MtrunA17_Chr3g0104491	39.241	79	41	2	62	133	1	79	1.81e-12	66.6
Msa0339980	MtrunA17_Chr2g0322831	60.976	41	16	0	79	119	34	74	1.50e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0339980	AT5G12870.1	44.848	330	118	11	1	322	1	274	1.97e-74	231
Msa0339980	AT3G08500.1	75.188	133	26	1	1	126	3	135	8.37e-68	216
Msa0339980	AT1G57560.2	78.704	108	23	0	18	125	9	116	4.80e-61	196
Msa0339980	AT1G57560.1	78.704	108	23	0	18	125	9	116	4.89e-61	197
Msa0339980	AT5G26660.1	75.214	117	29	0	18	134	9	125	8.25e-61	198
Msa0339980	AT4G01680.3	76.147	109	26	0	18	126	9	117	4.02e-59	190
Msa0339980	AT1G09540.1	76.147	109	26	0	18	126	9	117	1.72e-58	192
Msa0339980	AT4G01680.1	76.147	109	26	0	18	126	9	117	2.66e-58	191
Msa0339980	AT3G13890.2	74.312	109	28	0	17	125	8	116	4.72e-58	191
Msa0339980	AT3G13890.1	68.644	118	28	1	17	125	8	125	5.41e-55	183
Msa0339980	AT4G01680.2	68.595	121	26	1	18	126	9	129	7.35e-55	182
Msa0339980	AT1G63910.1	66.364	110	37	0	17	126	8	117	7.41e-53	178
Msa0339980	AT3G12720.1	66.667	108	36	0	18	125	19	126	1.41e-51	173
Msa0339980	AT4G05100.1	62.185	119	45	0	18	136	10	128	4.64e-50	169
Msa0339980	AT2G16720.1	58.209	134	56	0	18	151	9	142	5.70e-50	167
Msa0339980	AT4G21440.1	66.667	108	36	0	18	125	9	116	2.10e-49	168
Msa0339980	AT4G34990.1	59.091	132	47	2	23	147	14	145	2.29e-49	166
Msa0339980	AT1G22640.1	64.815	108	38	0	18	125	9	116	7.91e-49	164
Msa0339980	AT4G12350.1	42.925	212	104	4	17	212	8	218	8.95e-49	165
Msa0339980	AT4G38620.1	61.789	123	44	1	23	145	14	133	1.77e-48	164
Msa0339980	AT5G54230.1	67.619	105	34	0	21	125	12	116	2.12e-48	165
Msa0339980	AT4G28110.1	64.220	109	39	0	17	125	8	116	5.38e-48	162
Msa0339980	AT3G01140.2	56.589	129	56	0	17	145	8	136	9.36e-48	164
Msa0339980	AT3G02940.2	63.810	105	38	0	21	125	12	116	1.06e-47	163
Msa0339980	AT5G65230.1	64.762	105	37	0	21	125	12	116	1.36e-47	162
Msa0339980	AT5G15310.4	56.589	129	56	0	17	145	8	136	1.39e-47	160
Msa0339980	AT4G09460.1	62.963	108	40	0	18	125	9	116	1.70e-47	160
Msa0339980	AT3G01140.1	56.589	129	56	0	17	145	51	179	2.09e-47	164
Msa0339980	AT3G02940.1	63.810	105	38	0	21	125	12	116	2.17e-47	162
Msa0339980	AT3G02940.3	63.810	105	38	0	21	125	12	116	2.17e-47	162
Msa0339980	AT3G61250.1	60.714	112	44	0	17	128	8	119	2.37e-47	161
Msa0339980	AT1G66230.1	54.745	137	62	0	17	153	8	144	2.69e-47	161
Msa0339980	AT5G15310.1	56.589	129	56	0	17	145	8	136	2.83e-47	162
Msa0339980	AT5G15310.2	56.589	129	56	0	17	145	8	136	2.92e-47	162
Msa0339980	AT3G48920.1	55.639	133	58	1	8	140	5	136	5.37e-47	159
Msa0339980	AT5G14750.1	45.355	183	82	5	1	171	1	177	1.24e-46	157
Msa0339980	AT1G79180.1	48.193	166	83	2	17	181	10	173	1.53e-46	159
Msa0339980	AT5G10280.1	63.810	105	38	0	21	125	12	116	2.25e-46	160
Msa0339980	AT5G60890.1	40.385	208	114	4	21	219	12	218	2.87e-46	159
Msa0339980	AT1G34670.1	58.772	114	47	0	21	134	12	125	4.02e-46	160
Msa0339980	AT5G52600.1	40.291	206	100	4	17	219	8	193	6.78e-46	155
Msa0339980	AT1G18570.1	57.692	130	52	2	21	147	13	142	1.31e-45	158
Msa0339980	AT1G16490.1	37.500	256	144	6	17	259	10	262	1.47e-45	156
Msa0339980	AT5G56110.1	57.265	117	50	0	18	134	9	125	1.50e-45	157
Msa0339980	AT4G22680.1	51.370	146	57	1	17	148	8	153	1.89e-45	155
Msa0339980	AT3G23250.1	37.391	230	121	3	18	237	9	225	2.07e-45	156
Msa0339980	AT5G14340.1	54.815	135	60	1	17	151	20	153	2.54e-45	155
Msa0339980	AT5G16770.4	60.952	105	41	0	21	125	12	116	4.94e-45	156
Msa0339980	AT5G16770.3	60.952	105	41	0	21	125	12	116	4.94e-45	156
Msa0339980	AT1G35515.1	52.941	136	63	1	18	152	9	144	5.19e-45	153
Msa0339980	AT4G25560.1	65.094	106	37	0	19	124	8	113	6.07e-45	155
Msa0339980	AT5G61420.2	47.436	156	78	1	21	176	12	163	6.26e-45	157
Msa0339980	AT5G16770.1	60.952	105	41	0	21	125	12	116	9.22e-45	156
Msa0339980	AT5G16770.2	60.952	105	41	0	21	125	12	116	9.22e-45	156
Msa0339980	AT5G16600.1	58.475	118	49	0	17	134	8	125	1.07e-44	155
Msa0339980	AT2G31180.1	60.169	118	46	1	18	134	9	126	1.77e-44	152
Msa0339980	AT1G56160.1	60.550	109	43	0	17	125	10	118	2.09e-44	154
Msa0339980	AT5G40330.1	60.577	104	41	0	22	125	13	116	3.00e-44	151
Msa0339980	AT5G07700.1	53.600	125	53	1	21	140	12	136	3.51e-44	154
Msa0339980	AT5G07700.2	53.600	125	53	1	21	140	12	136	3.51e-44	154
Msa0339980	AT5G52260.1	65.421	107	37	0	18	124	9	115	3.95e-44	152
Msa0339980	AT1G74430.1	57.377	122	47	1	21	137	12	133	4.14e-44	152
Msa0339980	AT3G27920.1	51.562	128	60	1	19	146	12	137	4.45e-44	151
Msa0339980	AT3G27810.1	52.381	126	60	0	18	143	17	142	7.81e-44	150
Msa0339980	AT4G17785.2	60.748	107	42	0	19	125	11	117	8.00e-44	154
Msa0339980	AT4G17785.1	60.748	107	42	0	19	125	11	117	8.93e-44	154
Msa0339980	AT2G47460.1	60.360	111	44	0	18	128	9	119	1.06e-43	154
Msa0339980	AT1G06180.1	63.889	108	39	0	18	125	9	116	1.15e-43	150
Msa0339980	AT5G35550.1	58.621	116	48	0	10	125	3	118	1.23e-43	150
Msa0339980	AT5G07690.1	60.000	105	42	0	21	125	12	116	4.31e-43	151
Msa0339980	AT3G01530.1	58.491	106	44	0	21	126	25	130	1.09e-42	147
Msa0339980	AT3G13540.1	56.481	108	47	0	18	125	20	127	1.95e-42	147
Msa0339980	AT5G49330.1	57.391	115	49	0	18	132	9	123	2.46e-42	149
Msa0339980	AT3G28470.1	55.462	119	44	1	1	119	1	110	4.12e-42	148
Msa0339980	AT5G40350.1	40.659	182	88	3	20	181	16	197	1.02e-41	144
Msa0339980	AT1G74080.1	60.952	105	41	0	21	125	12	116	1.08e-41	147
Msa0339980	AT5G62320.1	58.929	112	39	1	21	125	13	124	1.90e-41	144
Msa0339980	AT3G12820.1	57.798	109	46	0	17	125	10	118	2.15e-41	144
Msa0339980	AT3G62610.1	58.333	108	45	0	18	125	9	116	2.15e-41	147
Msa0339980	AT1G68320.1	56.364	110	48	0	19	128	17	126	3.79e-41	145
Msa0339980	AT5G55020.1	58.491	106	44	0	21	126	26	131	4.37e-41	150
Msa0339980	AT3G30210.1	49.007	151	73	2	22	168	28	178	5.39e-41	144
Msa0339980	AT5G06100.1	57.547	106	45	0	21	126	32	137	8.90e-41	148
Msa0339980	AT3G47600.1	50.000	128	55	1	1	128	1	119	9.86e-41	145
Msa0339980	AT1G79180.2	40.704	199	82	3	17	181	10	206	1.69e-40	144
Msa0339980	AT2G26960.1	56.522	115	49	1	14	128	13	126	2.24e-40	146
Msa0339980	AT1G74650.1	52.000	125	51	1	1	125	1	116	2.38e-40	144
Msa0339980	AT5G06100.5	57.547	106	45	0	21	126	32	137	3.36e-40	147
Msa0339980	AT5G06100.2	57.547	106	45	0	21	126	32	137	3.36e-40	147
Msa0339980	AT5G06100.3	57.547	106	45	0	21	126	32	137	3.36e-40	147
Msa0339980	AT5G06100.4	57.547	106	45	0	21	126	32	137	3.36e-40	147
Msa0339980	AT1G08810.1	42.347	196	100	5	1	195	1	184	5.33e-40	142
Msa0339980	AT3G11440.2	55.660	106	47	0	21	126	41	146	7.54e-40	145
Msa0339980	AT5G62470.2	50.000	128	55	1	1	128	1	119	8.44e-40	143
Msa0339980	AT1G48000.1	55.963	109	48	0	20	128	31	139	1.18e-39	140
Msa0339980	AT3G28910.1	51.200	125	52	1	1	125	1	116	1.54e-39	142
Msa0339980	AT3G24310.1	59.434	106	43	0	22	127	19	124	1.84e-39	140
Msa0339980	AT5G26660.2	77.215	79	18	0	48	126	8	86	2.55e-39	141
Msa0339980	AT2G47190.1	54.630	108	49	0	21	128	20	127	3.27e-39	139
Msa0339980	AT3G11440.3	55.660	106	47	0	21	126	41	146	3.45e-39	145
Msa0339980	AT3G11440.4	55.660	106	47	0	21	126	41	146	3.45e-39	145
Msa0339980	AT3G11440.1	55.660	106	47	0	21	126	41	146	3.45e-39	145
Msa0339980	AT1G25340.1	51.200	125	52	1	13	128	1	125	5.01e-39	139
Msa0339980	AT2G32460.1	53.704	108	50	0	19	126	16	123	5.52e-39	144
Msa0339980	AT2G32460.2	53.704	108	50	0	19	126	4	111	6.20e-39	143
Msa0339980	AT3G49690.1	55.357	112	49	1	17	127	8	119	1.15e-38	139
Msa0339980	AT5G23000.1	54.545	110	49	1	17	125	8	117	1.47e-38	139
Msa0339980	AT4G26930.1	56.311	103	45	0	21	123	19	121	3.08e-38	140
Msa0339980	AT5G65790.1	54.464	112	50	1	17	127	8	119	3.33e-38	139
Msa0339980	AT5G62470.1	50.000	128	54	2	1	128	1	118	3.35e-38	139
Msa0339980	AT5G57620.1	54.545	110	49	1	17	125	8	117	3.56e-38	138
Msa0339980	AT4G13480.1	58.095	105	44	0	22	126	7	111	4.20e-38	136
Msa0339980	AT1G18710.1	55.238	105	47	0	21	125	12	116	4.35e-38	136
Msa0339980	AT3G06490.1	56.198	121	52	1	8	128	7	126	6.90e-38	137
Msa0339980	AT2G36890.1	51.818	110	52	1	17	125	8	117	5.40e-36	132
Msa0339980	AT2G36890.2	51.818	110	52	1	17	125	49	158	8.93e-36	132
Msa0339980	AT4G37780.1	50.909	110	53	1	17	125	8	117	2.00e-35	130
Msa0339980	AT1G66370.1	38.624	189	97	3	19	188	6	194	3.43e-35	128
Msa0339980	AT3G53200.1	54.808	104	47	0	21	124	9	112	1.00e-34	127
Msa0339980	AT5G49620.1	54.630	108	49	0	21	128	26	133	1.26e-34	128
Msa0339980	AT5G59780.3	51.376	109	53	0	18	126	5	113	1.59e-34	126
Msa0339980	AT1G25340.2	48.800	125	50	2	13	128	1	120	3.16e-34	127
Msa0339980	AT3G46130.1	52.381	105	50	0	22	126	10	114	4.38e-34	125
Msa0339980	AT1G25340.3	48.800	125	50	2	13	128	1	120	7.33e-34	126
Msa0339980	AT5G35550.2	72.727	77	21	0	49	125	45	121	3.34e-33	123
Msa0339980	AT2G26950.1	48.624	109	55	1	18	126	13	120	4.55e-33	126
Msa0339980	AT1G66380.1	55.660	106	47	0	19	124	6	111	1.78e-32	118
Msa0339980	AT5G14750.3	48.031	127	53	3	57	171	18	143	2.80e-32	118
Msa0339980	AT3G60460.1	50.442	113	54	2	17	128	7	118	2.09e-31	120
Msa0339980	AT3G27810.2	56.667	90	39	0	54	143	4	93	2.13e-31	116
Msa0339980	AT1G56650.1	54.717	106	48	0	19	124	6	111	5.01e-31	117
Msa0339980	AT5G49620.2	48.361	122	49	1	21	128	26	147	5.39e-31	119
Msa0339980	AT3G47600.2	52.577	97	42	1	32	128	21	113	1.47e-30	118
Msa0339980	AT1G66390.1	54.717	106	48	0	19	124	6	111	2.40e-30	115
Msa0339980	AT3G12820.2	71.014	69	20	0	57	125	2	70	2.74e-30	114
Msa0339980	AT5G40350.2	56.471	85	37	0	52	136	3	87	2.21e-29	110
Msa0339980	AT3G46130.3	59.459	74	30	0	53	126	9	82	1.93e-27	107
Msa0339980	AT3G53200.2	63.380	71	26	0	54	124	9	79	2.82e-27	106
Msa0339980	AT4G18770.1	43.548	124	66	2	18	141	212	331	3.27e-27	110
Msa0339980	AT5G59780.2	60.274	73	29	0	54	126	20	92	3.78e-27	106
Msa0339980	AT5G40360.1	41.129	124	69	3	17	138	150	271	5.76e-27	109
Msa0339980	AT3G46130.4	60.274	73	29	0	54	126	20	92	5.80e-27	106
Msa0339980	AT5G67300.1	48.039	102	52	1	23	124	6	106	4.62e-26	105
Msa0339980	AT5G58850.1	36.478	159	97	3	10	167	92	247	6.58e-26	107
Msa0339980	AT3G27785.1	43.925	107	59	1	18	124	184	289	1.14e-25	106
Msa0339980	AT2G39880.1	47.414	116	59	2	9	124	37	150	1.17e-25	105
Msa0339980	AT3G55730.1	50.467	107	50	2	23	128	56	160	1.37e-25	105
Msa0339980	AT4G37260.1	45.690	116	56	2	9	124	5	113	1.68e-25	104
Msa0339980	AT3G09230.1	50.485	103	50	1	23	125	55	156	2.19e-25	105
Msa0339980	AT3G09370.2	47.115	104	54	1	21	124	133	235	5.31e-25	105
Msa0339980	AT3G09370.1	47.115	104	54	1	21	124	128	230	5.48e-25	105
Msa0339980	AT5G02320.1	43.925	107	59	1	20	126	124	229	5.90e-25	105
Msa0339980	AT5G02320.2	43.925	107	59	1	20	126	124	229	5.90e-25	105
Msa0339980	AT5G02320.3	43.925	107	59	1	20	126	64	169	6.17e-25	105
Msa0339980	AT3G50060.1	37.241	145	86	3	23	166	6	146	7.59e-25	102
Msa0339980	AT3G09370.3	47.115	104	54	1	21	124	141	243	7.80e-25	105
Msa0339980	AT5G11050.1	42.056	107	59	2	19	124	101	205	7.98e-25	103
Msa0339980	AT1G22640.3	72.881	59	16	0	67	125	1	59	1.42e-24	99.0
Msa0339980	AT2G23290.1	43.590	117	59	2	8	124	4	113	1.91e-24	101
Msa0339980	AT1G69560.1	40.870	115	67	1	17	131	101	214	4.80e-24	100
Msa0339980	AT1G69560.2	40.870	115	67	1	17	131	117	230	5.61e-24	100
Msa0339980	AT3G23250.2	34.254	181	96	3	67	237	1	168	6.05e-24	98.2
Msa0339980	AT5G11510.3	42.857	112	63	1	20	131	78	188	7.70e-24	102
Msa0339980	AT5G11510.1	42.857	112	63	1	20	131	78	188	7.70e-24	102
Msa0339980	AT5G11510.4	42.857	112	63	1	20	131	78	188	7.70e-24	102
Msa0339980	AT2G25230.1	41.964	112	63	2	16	127	19	128	9.96e-24	97.8
Msa0339980	AT5G11510.5	42.857	112	63	1	20	131	78	188	1.03e-23	102
Msa0339980	AT5G11510.2	42.857	112	63	1	20	131	78	188	1.05e-23	102
Msa0339980	AT1G66380.3	61.111	72	28	0	53	124	7	78	3.91e-23	92.4
Msa0339980	AT1G17950.1	43.925	107	59	1	23	129	5	110	4.08e-23	96.3
Msa0339980	AT5G14750.4	43.590	117	53	3	67	171	1	116	5.12e-23	93.2
Msa0339980	AT5G14750.2	43.590	117	53	3	67	171	1	116	5.12e-23	93.2
Msa0339980	AT4G33450.1	37.879	132	80	2	5	136	2	131	6.39e-23	95.9
Msa0339980	AT1G26780.1	42.342	111	63	1	21	131	96	205	9.84e-23	96.3
Msa0339980	AT1G26780.2	42.342	111	63	1	21	131	96	205	1.16e-22	97.4
Msa0339980	AT4G32730.5	41.509	106	61	1	20	125	84	188	6.15e-22	97.1
Msa0339980	AT4G32730.4	41.509	106	61	1	20	125	84	188	6.15e-22	97.1
Msa0339980	AT4G32730.3	41.509	106	61	1	20	125	84	188	6.15e-22	97.1
Msa0339980	AT4G32730.2	41.509	106	61	1	20	125	84	188	6.15e-22	97.1
Msa0339980	AT4G32730.1	41.509	106	61	1	20	125	84	188	6.59e-22	97.1
Msa0339980	AT1G73410.1	43.925	107	59	1	23	129	6	111	2.49e-21	91.3
Msa0339980	AT5G17800.1	40.541	111	65	1	16	126	86	195	2.57e-21	92.8
Msa0339980	AT1G73410.2	43.925	107	59	1	23	129	6	111	6.29e-21	89.4
Msa0339980	AT1G71030.2	56.061	66	29	0	60	125	5	70	1.94e-20	87.4
Msa0339980	AT1G71030.1	56.061	66	29	0	60	125	19	84	2.41e-20	87.4
Msa0339980	AT3G29020.1	34.615	156	96	4	23	175	65	217	2.68e-20	88.6
Msa0339980	AT3G29020.2	39.450	109	65	1	23	131	67	174	3.11e-20	89.7
Msa0339980	AT4G00540.2	39.823	113	64	2	21	130	101	212	1.37e-19	89.0
Msa0339980	AT5G40430.1	36.301	146	76	5	16	148	47	188	1.62e-19	86.7
Msa0339980	AT4G00540.1	39.823	113	64	2	21	130	99	210	2.49e-19	88.6
Msa0339980	AT1G66380.2	53.750	80	37	0	19	98	6	85	2.99e-19	82.0
Msa0339980	AT1G18960.1	38.889	108	59	4	23	128	10	112	4.93e-19	86.3
Msa0339980	AT2G02820.1	40.179	112	65	2	17	127	23	133	9.07e-19	87.0
Msa0339980	AT2G02820.2	40.179	112	65	2	17	127	23	133	1.09e-18	87.0
Msa0339980	AT2G02820.3	40.179	112	65	2	17	127	23	133	1.28e-18	85.5
Msa0339980	AT1G14350.2	37.931	116	70	2	17	131	18	132	1.16e-16	80.9
Msa0339980	AT1G14350.1	37.931	116	70	2	17	131	18	132	1.16e-16	80.9
Msa0339980	AT5G39700.1	35.593	118	75	1	18	135	51	167	3.25e-16	76.3
Msa0339980	AT2G37630.1	40.426	94	54	1	26	117	7	100	1.60e-15	77.0
Msa0339980	AT4G25560.2	68.889	45	14	0	80	124	3	47	2.99e-14	71.2
Msa0339980	AT5G59780.1	52.083	48	23	0	79	126	1	48	1.66e-12	65.1
Msa0339980	AT3G46130.2	52.083	48	23	0	79	126	1	48	3.04e-12	65.1
Msa0339980	AT1G74650.3	62.500	40	15	0	86	125	1	40	1.48e-11	63.9
Msa0339980	AT1G14350.3	43.284	67	38	0	65	131	23	89	2.05e-11	64.7
Msa0339980	AT1G14350.4	43.284	67	38	0	65	131	23	89	2.05e-11	64.7
Msa0339980	AT3G28910.2	60.000	40	16	0	86	125	1	40	3.16e-11	63.2
Msa0339980	AT1G16490.2	44.444	81	36	3	87	162	15	91	4.64e-11	62.0

Find 83 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCCCTCAATTTCTTCTAAT+TGG	0.081358	2_4:-61266919	Msa0339980:three_prime_UTR
CATAAATCCTGACTAATAAA+TGG	0.191400	2_4:+61266892	None:intergenic
CCCCTCAATTTCTTCTAATT+GGG	0.199059	2_4:-61266918	Msa0339980:three_prime_UTR
CAGGATTTATGAACCTTAAT+TGG	0.214083	2_4:-61266880	Msa0339980:three_prime_UTR
AATCATGAGGTTGACATTAA+AGG	0.223605	2_4:-61267284	Msa0339980:CDS
AGGACTCATCACTTGGATTT+GGG	0.265250	2_4:+61267537	None:intergenic
GAGGACTCATCACTTGGATT+TGG	0.297350	2_4:+61267536	None:intergenic
ACCACCAAGTATACCAATTA+AGG	0.307175	2_4:+61266867	None:intergenic
TGTATATTCAAATCTTTGTT+AGG	0.313152	2_4:+61267506	None:intergenic
TATTTAGAAAACGGTGTGTT+TGG	0.322924	2_4:-61267257	Msa0339980:CDS
ATCCATTTCCATTCTCTACT+TGG	0.331995	2_4:-61268506	Msa0339980:CDS
ATTCAAATCTTTGTTAGGTT+CGG	0.336340	2_4:+61267511	None:intergenic
GGAAAATCAAGAAAATAAAA+AGG	0.339343	2_4:+61266992	None:intergenic
ATAAGTTTCTCATCTTCTTC+TGG	0.343578	2_4:+61268686	None:intergenic
TTCAAATCTTTGTTAGGTTC+GGG	0.351467	2_4:+61267512	None:intergenic
TCCATTCTCTACTTGGAAAC+AGG	0.357544	2_4:-61268499	Msa0339980:intron
TATTGGAGTAGAAGGGGATA+TGG	0.375126	2_4:-61267225	Msa0339980:CDS
TGAAAGTAGGGGTGAGGTAG+TGG	0.375140	2_4:-61267084	Msa0339980:CDS
TGAGAAACTTATGAACTATA+TGG	0.383745	2_4:-61268675	Msa0339980:CDS
AGTGTAAATATTGGAGTAGA+AGG	0.384138	2_4:-61267233	Msa0339980:CDS
TGCATGTTGTGTAGAAATAT+AGG	0.384996	2_4:+61267478	None:intergenic
TGGGGTCCCATTTATTAGTC+AGG	0.399514	2_4:-61266899	Msa0339980:three_prime_UTR
TAATAATAAAATTGAAAGTA+GGG	0.401145	2_4:-61267096	Msa0339980:CDS
ATAATAATAAAATTGAAAGT+AGG	0.407438	2_4:-61267097	Msa0339980:CDS
ACTTGGATTTGGGGAGGTTG+AGG	0.409891	2_4:+61267547	None:intergenic
CAAATATTATCGGATCATAA+TGG	0.412003	2_4:+61266971	None:intergenic
AATATTTGTTTGTGATCCTA+AGG	0.417693	2_4:-61266956	Msa0339980:three_prime_UTR
TGAACCTTAATTGGTATACT+TGG	0.425448	2_4:-61266871	Msa0339980:three_prime_UTR
AAAGGTTCTTATTTAGAAAA+CGG	0.426028	2_4:-61267266	Msa0339980:CDS
GGATCACAAACAAATATTAT+CGG	0.432243	2_4:+61266961	None:intergenic
AATAAGAAGAAGCTTAGAAA+AGG	0.435891	2_4:-61268719	Msa0339980:CDS
ATAAGAAGAAGCTTAGAAAA+GGG	0.437066	2_4:-61268718	Msa0339980:CDS
GCAAAAGTTGTAGGCTAAGA+TGG	0.440363	2_4:-61268592	Msa0339980:CDS
CAAATAGCAGCACGATTGCC+AGG	0.441194	2_4:-61267650	Msa0339980:CDS
AGGCAATGTGTCAATATTCA+TGG	0.442675	2_4:+61267370	None:intergenic
TGGGGAGGTTGAGGTTGTTG+TGG	0.443163	2_4:+61267556	None:intergenic
ATTTAGAAAACGGTGTGTTT+GGG	0.445772	2_4:-61267256	Msa0339980:CDS
ATAAATCCTGACTAATAAAT+GGG	0.447414	2_4:+61266893	None:intergenic
AACAATTCAACTTGGGAGAG+TGG	0.449413	2_4:-61267046	Msa0339980:CDS
CCCTCAATTTCTTCTAATTG+GGG	0.459556	2_4:-61266917	Msa0339980:three_prime_UTR
TTCCAAGTAGAGAATGGAAA+TGG	0.466365	2_4:+61268504	None:intergenic
TATTGACACATTGCCTATGC+TGG	0.468449	2_4:-61267363	Msa0339980:CDS
AGAAGCTTAGAAAAGGGTTA+TGG	0.469205	2_4:-61268712	Msa0339980:CDS
GTGTAAATATTGGAGTAGAA+GGG	0.475382	2_4:-61267232	Msa0339980:CDS
ACCTTAATTGGTATACTTGG+TGG	0.482688	2_4:-61266868	Msa0339980:three_prime_UTR
AAAGGTGTGGCAAAAGTTGT+AGG	0.487488	2_4:-61268601	Msa0339980:CDS
ACCTGTTTCCAAGTAGAGAA+TGG	0.491903	2_4:+61268498	None:intergenic
GTGTTTGGGAGTGTAAATAT+TGG	0.495234	2_4:-61267242	Msa0339980:CDS
AGTGATGTGGCAAGAAATGC+TGG	0.495909	2_4:-61268629	Msa0339980:CDS
ATTTCAAGAACAATTCAACT+TGG	0.497764	2_4:-61267054	Msa0339980:CDS
ATTTCATTGTCGGTTCTCCC+TGG	0.500673	2_4:+61267632	None:intergenic
ATCTTTGTTAGGTTCGGGTG+AGG	0.513687	2_4:+61267517	None:intergenic
AACAAAGATTTGAATATACA+AGG	0.516351	2_4:-61267503	Msa0339980:CDS
TAAGGAATGGACAAGGATGT+TGG	0.517923	2_4:-61268652	Msa0339980:CDS
CATCAAAATAATAATCAGAA+TGG	0.523422	2_4:+61267177	None:intergenic
TTGAGGCCTGATCTTAAAAG+AGG	0.524373	2_4:-61268560	Msa0339980:CDS
TCGGGTGAGGACTCATCACT+TGG	0.529011	2_4:+61267530	None:intergenic
TTTCAAGAACAATTCAACTT+GGG	0.530674	2_4:-61267053	Msa0339980:CDS
ACCCCAATTAGAAGAAATTG+AGG	0.532856	2_4:+61266916	None:intergenic
TGTAAATATTGGAGTAGAAG+GGG	0.535040	2_4:-61267231	Msa0339980:CDS
ACAATTCAACTTGGGAGAGT+GGG	0.538614	2_4:-61267045	Msa0339980:CDS
CTCATCACTTGGATTTGGGG+AGG	0.540082	2_4:+61267541	None:intergenic
AACTTATGAACTATATGGTA+AGG	0.549340	2_4:-61268670	Msa0339980:CDS
TGTGGCAAGAAATGCTGGAT+TGG	0.558000	2_4:-61268624	Msa0339980:CDS
TGCTTTCTCAACACAAGAAG+AGG	0.558583	2_4:-61268537	Msa0339980:CDS
TTGCCTATGCTGGATCATAG+TGG	0.564019	2_4:-61267353	Msa0339980:CDS
ATATTTGTTTGTGATCCTAA+GGG	0.565675	2_4:-61266955	Msa0339980:three_prime_UTR
GGACTCATCACTTGGATTTG+GGG	0.566010	2_4:+61267538	None:intergenic
TAAAATTGAAAGTAGGGGTG+AGG	0.569767	2_4:-61267090	Msa0339980:CDS
CCCCAATTAGAAGAAATTGA+GGG	0.570357	2_4:+61266917	None:intergenic
ATGAACTATATGGTAAGGAA+TGG	0.576418	2_4:-61268665	Msa0339980:CDS
AATAATAAAATTGAAAGTAG+GGG	0.599961	2_4:-61267095	Msa0339980:CDS
TAAGATGGATCAATTACTTG+AGG	0.619133	2_4:-61268577	Msa0339980:CDS
AAATAGCAGCACGATTGCCA+GGG	0.633923	2_4:-61267649	Msa0339980:CDS
TATCCACTATGATCCAGCAT+AGG	0.635105	2_4:+61267350	None:intergenic
CCCAATTAGAAGAAATTGAG+GGG	0.638666	2_4:+61266918	None:intergenic
GATGATGATGAAGTGAACAT+AGG	0.639637	2_4:+61267431	None:intergenic
ACAAAGATTTGAATATACAA+GGG	0.641200	2_4:-61267502	Msa0339980:CDS
GGTACATATATATTACAAGT+CGG	0.661210	2_4:+61266834	None:intergenic
CAAGAAATGCTGGATTGGAA+AGG	0.662106	2_4:-61268619	Msa0339980:CDS
ACAAGGATGTTGGAGTGATG+TGG	0.680620	2_4:-61268642	Msa0339980:CDS
TATATGGTAAGGAATGGACA+AGG	0.707363	2_4:-61268659	Msa0339980:CDS
AATGCTGGATTGGAAAGGTG+TGG	0.738038	2_4:-61268614	Msa0339980:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAAAATATTTGAACTTA+AGG	+	chr2_4:61267517-61267536	None:intergenic	10.0%
!!!	ATATTTTTAATAATGAAAAC+AGG	-	chr2_4:61267526-61267545	Msa0339980:CDS	10.0%
!!	TTCATTTATTCTATATAAAA+AGG	+	chr2_4:61267666-61267685	None:intergenic	10.0%
!!	ATAATAATAAAATTGAAAGT+AGG	-	chr2_4:61268493-61268512	Msa0339980:intron	10.0%
!!	TAATAATAAAATTGAAAGTA+GGG	-	chr2_4:61268494-61268513	Msa0339980:intron	10.0%
!!	ATTAAAAATATTTGAACTTA+AGG	+	chr2_4:61267517-61267536	None:intergenic	10.0%
!!!	ATATTTTTAATAATGAAAAC+AGG	-	chr2_4:61267526-61267545	Msa0339980:CDS	10.0%
!!	TTCATTTATTCTATATAAAA+AGG	+	chr2_4:61267666-61267685	None:intergenic	10.0%
!!	ATAATAATAAAATTGAAAGT+AGG	-	chr2_4:61268493-61268512	Msa0339980:intron	10.0%
!!	TAATAATAAAATTGAAAGTA+GGG	-	chr2_4:61268494-61268513	Msa0339980:intron	10.0%
!!	ATTGAATTTATTGTTTAAGA+TGG	+	chr2_4:61267146-61267165	None:intergenic	15.0%
!!!	GTGATTTTGTTAAATTATAT+TGG	-	chr2_4:61267199-61267218	Msa0339980:CDS	15.0%
!!!	TTTTCAACATATATGAATTA+TGG	+	chr2_4:61267249-61267268	None:intergenic	15.0%
!!	TAATAAAAAATCTTCAGATA+TGG	+	chr2_4:61267800-61267819	None:intergenic	15.0%
!!!	AAAGTTTTTTATTTCATTGT+CGG	+	chr2_4:61267971-61267990	None:intergenic	15.0%
!!!	ACAATGAAATAAAAAACTTT+TGG	-	chr2_4:61267971-61267990	Msa0339980:intron	15.0%
!!	AATAATAAAATTGAAAGTAG+GGG	-	chr2_4:61268495-61268514	Msa0339980:intron	15.0%
!!	ATTGAATTTATTGTTTAAGA+TGG	+	chr2_4:61267146-61267165	None:intergenic	15.0%
!!!	GTGATTTTGTTAAATTATAT+TGG	-	chr2_4:61267199-61267218	Msa0339980:CDS	15.0%
!!!	TTTTCAACATATATGAATTA+TGG	+	chr2_4:61267249-61267268	None:intergenic	15.0%
!!	TAATAAAAAATCTTCAGATA+TGG	+	chr2_4:61267800-61267819	None:intergenic	15.0%
!!!	AAAGTTTTTTATTTCATTGT+CGG	+	chr2_4:61267971-61267990	None:intergenic	15.0%
!!!	ACAATGAAATAAAAAACTTT+TGG	-	chr2_4:61267971-61267990	Msa0339980:intron	15.0%
!!	AATAATAAAATTGAAAGTAG+GGG	-	chr2_4:61268495-61268514	Msa0339980:intron	15.0%
!!	TATATGAATTATGGTGAATT+TGG	+	chr2_4:61267240-61267259	None:intergenic	20.0%
!!	TGATTATTGTATGACTTAAA+TGG	+	chr2_4:61267582-61267601	None:intergenic	20.0%
!!!	ATACATTTGATTTTTGAAGA+TGG	-	chr2_4:61267914-61267933	Msa0339980:intron	20.0%
!!	TGTATATTCAAATCTTTGTT+AGG	+	chr2_4:61268087-61268106	None:intergenic	20.0%
!!	AACAAAGATTTGAATATACA+AGG	-	chr2_4:61268087-61268106	Msa0339980:intron	20.0%
!!	ACAAAGATTTGAATATACAA+GGG	-	chr2_4:61268088-61268107	Msa0339980:intron	20.0%
!!!	AAAGGTTCTTATTTAGAAAA+CGG	-	chr2_4:61268324-61268343	Msa0339980:intron	20.0%
!!	CATCAAAATAATAATCAGAA+TGG	+	chr2_4:61268416-61268435	None:intergenic	20.0%
!!	AAATCAAGAAAATAAAAAGG+AGG	+	chr2_4:61268598-61268617	None:intergenic	20.0%
!!	GGAAAATCAAGAAAATAAAA+AGG	+	chr2_4:61268601-61268620	None:intergenic	20.0%
!!	ATAAATCCTGACTAATAAAT+GGG	+	chr2_4:61268700-61268719	None:intergenic	20.0%
!!	TATATGAATTATGGTGAATT+TGG	+	chr2_4:61267240-61267259	None:intergenic	20.0%
!!	TGATTATTGTATGACTTAAA+TGG	+	chr2_4:61267582-61267601	None:intergenic	20.0%
!!!	ATACATTTGATTTTTGAAGA+TGG	-	chr2_4:61267914-61267933	Msa0339980:intron	20.0%
!!	TGTATATTCAAATCTTTGTT+AGG	+	chr2_4:61268087-61268106	None:intergenic	20.0%
!!	AACAAAGATTTGAATATACA+AGG	-	chr2_4:61268087-61268106	Msa0339980:intron	20.0%
!!	ACAAAGATTTGAATATACAA+GGG	-	chr2_4:61268088-61268107	Msa0339980:intron	20.0%
!!!	AAAGGTTCTTATTTAGAAAA+CGG	-	chr2_4:61268324-61268343	Msa0339980:intron	20.0%
!!	CATCAAAATAATAATCAGAA+TGG	+	chr2_4:61268416-61268435	None:intergenic	20.0%
!!	AAATCAAGAAAATAAAAAGG+AGG	+	chr2_4:61268598-61268617	None:intergenic	20.0%
!!	GGAAAATCAAGAAAATAAAA+AGG	+	chr2_4:61268601-61268620	None:intergenic	20.0%
!!	ATAAATCCTGACTAATAAAT+GGG	+	chr2_4:61268700-61268719	None:intergenic	20.0%
!!!	TTTTTAGTACTACAAATCTC+TGG	+	chr2_4:61266835-61266854	None:intergenic	25.0%
!	AATAAGAAGAAGCTTAGAAA+AGG	-	chr2_4:61266871-61266890	Msa0339980:three_prime_UTR	25.0%
!	ATAAGAAGAAGCTTAGAAAA+GGG	-	chr2_4:61266872-61266891	Msa0339980:three_prime_UTR	25.0%
!	TGAGAAACTTATGAACTATA+TGG	-	chr2_4:61266915-61266934	Msa0339980:three_prime_UTR	25.0%
!	AACTTATGAACTATATGGTA+AGG	-	chr2_4:61266920-61266939	Msa0339980:three_prime_UTR	25.0%
!!	ATGCATCATTGATTAACATT+AGG	-	chr2_4:61267168-61267187	Msa0339980:CDS	25.0%
!!	TGCATCATTGATTAACATTA+GGG	-	chr2_4:61267169-61267188	Msa0339980:CDS	25.0%
!!!	ATTTTTTCCTCAAACAAATG+AGG	-	chr2_4:61267706-61267725	Msa0339980:intron	25.0%
!	TAACAAAAGAATACTTTGCA+TGG	+	chr2_4:61267827-61267846	None:intergenic	25.0%
!	ATCAAATGTATTCAAATGTC+AGG	+	chr2_4:61267905-61267924	None:intergenic	25.0%
!	ATTCAAATCTTTGTTAGGTT+CGG	+	chr2_4:61268082-61268101	None:intergenic	25.0%
!!	ATTGTGTTTTGCAATATTGA+TGG	+	chr2_4:61268192-61268211	None:intergenic	25.0%
!	ATTTCAAGAACAATTCAACT+TGG	-	chr2_4:61268536-61268555	Msa0339980:CDS	25.0%
!	TTTCAAGAACAATTCAACTT+GGG	-	chr2_4:61268537-61268556	Msa0339980:CDS	25.0%
!	CAAATATTATCGGATCATAA+TGG	+	chr2_4:61268622-61268641	None:intergenic	25.0%
!	GGATCACAAACAAATATTAT+CGG	+	chr2_4:61268632-61268651	None:intergenic	25.0%
!	AATATTTGTTTGTGATCCTA+AGG	-	chr2_4:61268634-61268653	Msa0339980:CDS	25.0%
!	ATATTTGTTTGTGATCCTAA+GGG	-	chr2_4:61268635-61268654	Msa0339980:CDS	25.0%
!	CATAAATCCTGACTAATAAA+TGG	+	chr2_4:61268701-61268720	None:intergenic	25.0%
!	GGTACATATATATTACAAGT+CGG	+	chr2_4:61268759-61268778	None:intergenic	25.0%
!!!	TACCTTTGTTTTTATACGAA+AGG	-	chr2_4:61268775-61268794	Msa0339980:exon	25.0%
!!!	TTTTTAGTACTACAAATCTC+TGG	+	chr2_4:61266835-61266854	None:intergenic	25.0%
!	AATAAGAAGAAGCTTAGAAA+AGG	-	chr2_4:61266871-61266890	Msa0339980:three_prime_UTR	25.0%
!	ATAAGAAGAAGCTTAGAAAA+GGG	-	chr2_4:61266872-61266891	Msa0339980:three_prime_UTR	25.0%
!	TGAGAAACTTATGAACTATA+TGG	-	chr2_4:61266915-61266934	Msa0339980:three_prime_UTR	25.0%
!	AACTTATGAACTATATGGTA+AGG	-	chr2_4:61266920-61266939	Msa0339980:three_prime_UTR	25.0%
!!	ATGCATCATTGATTAACATT+AGG	-	chr2_4:61267168-61267187	Msa0339980:CDS	25.0%
!!	TGCATCATTGATTAACATTA+GGG	-	chr2_4:61267169-61267188	Msa0339980:CDS	25.0%
!!!	ATTTTTTCCTCAAACAAATG+AGG	-	chr2_4:61267706-61267725	Msa0339980:intron	25.0%
!	TAACAAAAGAATACTTTGCA+TGG	+	chr2_4:61267827-61267846	None:intergenic	25.0%
!	ATCAAATGTATTCAAATGTC+AGG	+	chr2_4:61267905-61267924	None:intergenic	25.0%
!	ATTCAAATCTTTGTTAGGTT+CGG	+	chr2_4:61268082-61268101	None:intergenic	25.0%
!!	ATTGTGTTTTGCAATATTGA+TGG	+	chr2_4:61268192-61268211	None:intergenic	25.0%
!	ATTTCAAGAACAATTCAACT+TGG	-	chr2_4:61268536-61268555	Msa0339980:CDS	25.0%
!	TTTCAAGAACAATTCAACTT+GGG	-	chr2_4:61268537-61268556	Msa0339980:CDS	25.0%
!	CAAATATTATCGGATCATAA+TGG	+	chr2_4:61268622-61268641	None:intergenic	25.0%
!	GGATCACAAACAAATATTAT+CGG	+	chr2_4:61268632-61268651	None:intergenic	25.0%
!	AATATTTGTTTGTGATCCTA+AGG	-	chr2_4:61268634-61268653	Msa0339980:CDS	25.0%
!	ATATTTGTTTGTGATCCTAA+GGG	-	chr2_4:61268635-61268654	Msa0339980:CDS	25.0%
!	CATAAATCCTGACTAATAAA+TGG	+	chr2_4:61268701-61268720	None:intergenic	25.0%
!	GGTACATATATATTACAAGT+CGG	+	chr2_4:61268759-61268778	None:intergenic	25.0%
!!!	TACCTTTGTTTTTATACGAA+AGG	-	chr2_4:61268775-61268794	Msa0339980:exon	25.0%
	ATAAGTTTCTCATCTTCTTC+TGG	+	chr2_4:61266907-61266926	None:intergenic	30.0%
	ATGAACTATATGGTAAGGAA+TGG	-	chr2_4:61266925-61266944	Msa0339980:three_prime_UTR	30.0%
	TAAGATGGATCAATTACTTG+AGG	-	chr2_4:61267013-61267032	Msa0339980:CDS	30.0%
!	GTTTAAGATGGATGATTAAG+TGG	+	chr2_4:61267134-61267153	None:intergenic	30.0%
!	ATCATTGATTAACATTAGGG+TGG	-	chr2_4:61267172-61267191	Msa0339980:CDS	30.0%
	GATAACATGCAAACATATTC+TGG	+	chr2_4:61267431-61267450	None:intergenic	30.0%
	TAGTTAACCTCATTTGTTTG+AGG	+	chr2_4:61267716-61267735	None:intergenic	30.0%
	TTCAAATCTTTGTTAGGTTC+GGG	+	chr2_4:61268081-61268100	None:intergenic	30.0%
	TGCATGTTGTGTAGAAATAT+AGG	+	chr2_4:61268115-61268134	None:intergenic	30.0%
	AATCATGAGGTTGACATTAA+AGG	-	chr2_4:61268306-61268325	Msa0339980:intron	30.0%
	TATTTAGAAAACGGTGTGTT+TGG	-	chr2_4:61268333-61268352	Msa0339980:intron	30.0%
	ATTTAGAAAACGGTGTGTTT+GGG	-	chr2_4:61268334-61268353	Msa0339980:intron	30.0%
	AGTGTAAATATTGGAGTAGA+AGG	-	chr2_4:61268357-61268376	Msa0339980:intron	30.0%
	GTGTAAATATTGGAGTAGAA+GGG	-	chr2_4:61268358-61268377	Msa0339980:intron	30.0%
	TGTAAATATTGGAGTAGAAG+GGG	-	chr2_4:61268359-61268378	Msa0339980:intron	30.0%
	GAAAAATGGTATATACCCTT+AGG	+	chr2_4:61268653-61268672	None:intergenic	30.0%
	CAGGATTTATGAACCTTAAT+TGG	-	chr2_4:61268710-61268729	Msa0339980:CDS	30.0%
	TGAACCTTAATTGGTATACT+TGG	-	chr2_4:61268719-61268738	Msa0339980:CDS	30.0%
	CTCCTTTCGTATAAAAACAA+AGG	+	chr2_4:61268780-61268799	None:intergenic	30.0%
	ATAAGTTTCTCATCTTCTTC+TGG	+	chr2_4:61266907-61266926	None:intergenic	30.0%
	ATGAACTATATGGTAAGGAA+TGG	-	chr2_4:61266925-61266944	Msa0339980:three_prime_UTR	30.0%
	TAAGATGGATCAATTACTTG+AGG	-	chr2_4:61267013-61267032	Msa0339980:CDS	30.0%
!	GTTTAAGATGGATGATTAAG+TGG	+	chr2_4:61267134-61267153	None:intergenic	30.0%
!	ATCATTGATTAACATTAGGG+TGG	-	chr2_4:61267172-61267191	Msa0339980:CDS	30.0%
	GATAACATGCAAACATATTC+TGG	+	chr2_4:61267431-61267450	None:intergenic	30.0%
	TAGTTAACCTCATTTGTTTG+AGG	+	chr2_4:61267716-61267735	None:intergenic	30.0%
	TTCAAATCTTTGTTAGGTTC+GGG	+	chr2_4:61268081-61268100	None:intergenic	30.0%
	TGCATGTTGTGTAGAAATAT+AGG	+	chr2_4:61268115-61268134	None:intergenic	30.0%
	AATCATGAGGTTGACATTAA+AGG	-	chr2_4:61268306-61268325	Msa0339980:intron	30.0%
	TATTTAGAAAACGGTGTGTT+TGG	-	chr2_4:61268333-61268352	Msa0339980:intron	30.0%
	ATTTAGAAAACGGTGTGTTT+GGG	-	chr2_4:61268334-61268353	Msa0339980:intron	30.0%
	AGTGTAAATATTGGAGTAGA+AGG	-	chr2_4:61268357-61268376	Msa0339980:intron	30.0%
	GTGTAAATATTGGAGTAGAA+GGG	-	chr2_4:61268358-61268377	Msa0339980:intron	30.0%
	TGTAAATATTGGAGTAGAAG+GGG	-	chr2_4:61268359-61268378	Msa0339980:intron	30.0%
	GAAAAATGGTATATACCCTT+AGG	+	chr2_4:61268653-61268672	None:intergenic	30.0%
	CAGGATTTATGAACCTTAAT+TGG	-	chr2_4:61268710-61268729	Msa0339980:CDS	30.0%
	TGAACCTTAATTGGTATACT+TGG	-	chr2_4:61268719-61268738	Msa0339980:CDS	30.0%
	CTCCTTTCGTATAAAAACAA+AGG	+	chr2_4:61268780-61268799	None:intergenic	30.0%
	AGAAGCTTAGAAAAGGGTTA+TGG	-	chr2_4:61266878-61266897	Msa0339980:three_prime_UTR	35.0%
	TATATGGTAAGGAATGGACA+AGG	-	chr2_4:61266931-61266950	Msa0339980:three_prime_UTR	35.0%
!!!	AAAGCACCTCTTTTAAGATC+AGG	+	chr2_4:61267039-61267058	None:intergenic	35.0%
	ATCCATTTCCATTCTCTACT+TGG	-	chr2_4:61267084-61267103	Msa0339980:CDS	35.0%
	TTCCAAGTAGAGAATGGAAA+TGG	+	chr2_4:61267089-61267108	None:intergenic	35.0%
!	GATGATGATGAAGTGAACAT+AGG	+	chr2_4:61268162-61268181	None:intergenic	35.0%
	AGGCAATGTGTCAATATTCA+TGG	+	chr2_4:61268223-61268242	None:intergenic	35.0%
!	TGATTTTGTGACGAAAAGCA+TGG	+	chr2_4:61268291-61268310	None:intergenic	35.0%
!	CTTTTCGTCACAAAATCATG+AGG	-	chr2_4:61268293-61268312	Msa0339980:intron	35.0%
!	GTGTTTGGGAGTGTAAATAT+TGG	-	chr2_4:61268348-61268367	Msa0339980:intron	35.0%
	TAAAATTGAAAGTAGGGGTG+AGG	-	chr2_4:61268500-61268519	Msa0339980:CDS	35.0%
	GAAGAAATTGAGGGGAAAAA+TGG	+	chr2_4:61268667-61268686	None:intergenic	35.0%
	TCCCCTCAATTTCTTCTAAT+TGG	-	chr2_4:61268671-61268690	Msa0339980:CDS	35.0%
	CCCAATTAGAAGAAATTGAG+GGG	+	chr2_4:61268675-61268694	None:intergenic	35.0%
	CCCCTCAATTTCTTCTAATT+GGG	-	chr2_4:61268672-61268691	Msa0339980:CDS	35.0%
	CCCCAATTAGAAGAAATTGA+GGG	+	chr2_4:61268676-61268695	None:intergenic	35.0%
	CCCTCAATTTCTTCTAATTG+GGG	-	chr2_4:61268673-61268692	Msa0339980:CDS	35.0%
	ACCCCAATTAGAAGAAATTG+AGG	+	chr2_4:61268677-61268696	None:intergenic	35.0%
	ACCTTAATTGGTATACTTGG+TGG	-	chr2_4:61268722-61268741	Msa0339980:CDS	35.0%
	ACCACCAAGTATACCAATTA+AGG	+	chr2_4:61268726-61268745	None:intergenic	35.0%
	AGAAGCTTAGAAAAGGGTTA+TGG	-	chr2_4:61266878-61266897	Msa0339980:three_prime_UTR	35.0%
	TATATGGTAAGGAATGGACA+AGG	-	chr2_4:61266931-61266950	Msa0339980:three_prime_UTR	35.0%
!!!	AAAGCACCTCTTTTAAGATC+AGG	+	chr2_4:61267039-61267058	None:intergenic	35.0%
	ATCCATTTCCATTCTCTACT+TGG	-	chr2_4:61267084-61267103	Msa0339980:CDS	35.0%
	TTCCAAGTAGAGAATGGAAA+TGG	+	chr2_4:61267089-61267108	None:intergenic	35.0%
!	GATGATGATGAAGTGAACAT+AGG	+	chr2_4:61268162-61268181	None:intergenic	35.0%
	AGGCAATGTGTCAATATTCA+TGG	+	chr2_4:61268223-61268242	None:intergenic	35.0%
!	TGATTTTGTGACGAAAAGCA+TGG	+	chr2_4:61268291-61268310	None:intergenic	35.0%
!	CTTTTCGTCACAAAATCATG+AGG	-	chr2_4:61268293-61268312	Msa0339980:intron	35.0%
!	GTGTTTGGGAGTGTAAATAT+TGG	-	chr2_4:61268348-61268367	Msa0339980:intron	35.0%
	TAAAATTGAAAGTAGGGGTG+AGG	-	chr2_4:61268500-61268519	Msa0339980:CDS	35.0%
	GAAGAAATTGAGGGGAAAAA+TGG	+	chr2_4:61268667-61268686	None:intergenic	35.0%
	TCCCCTCAATTTCTTCTAAT+TGG	-	chr2_4:61268671-61268690	Msa0339980:CDS	35.0%
	CCCAATTAGAAGAAATTGAG+GGG	+	chr2_4:61268675-61268694	None:intergenic	35.0%
	CCCCTCAATTTCTTCTAATT+GGG	-	chr2_4:61268672-61268691	Msa0339980:CDS	35.0%
	CCCCAATTAGAAGAAATTGA+GGG	+	chr2_4:61268676-61268695	None:intergenic	35.0%
	CCCTCAATTTCTTCTAATTG+GGG	-	chr2_4:61268673-61268692	Msa0339980:CDS	35.0%
	ACCCCAATTAGAAGAAATTG+AGG	+	chr2_4:61268677-61268696	None:intergenic	35.0%
	ACCTTAATTGGTATACTTGG+TGG	-	chr2_4:61268722-61268741	Msa0339980:CDS	35.0%
	ACCACCAAGTATACCAATTA+AGG	+	chr2_4:61268726-61268745	None:intergenic	35.0%
	TAAGGAATGGACAAGGATGT+TGG	-	chr2_4:61266938-61266957	Msa0339980:three_prime_UTR	40.0%
!	CAAGAAATGCTGGATTGGAA+AGG	-	chr2_4:61266971-61266990	Msa0339980:three_prime_UTR	40.0%
!	AAAGGTGTGGCAAAAGTTGT+AGG	-	chr2_4:61266989-61267008	Msa0339980:exon	40.0%
	GCAAAAGTTGTAGGCTAAGA+TGG	-	chr2_4:61266998-61267017	Msa0339980:CDS	40.0%
	TTGAGGCCTGATCTTAAAAG+AGG	-	chr2_4:61267030-61267049	Msa0339980:CDS	40.0%
	TGCTTTCTCAACACAAGAAG+AGG	-	chr2_4:61267053-61267072	Msa0339980:CDS	40.0%
	TCCATTCTCTACTTGGAAAC+AGG	-	chr2_4:61267091-61267110	Msa0339980:CDS	40.0%
	ACCTGTTTCCAAGTAGAGAA+TGG	+	chr2_4:61267095-61267114	None:intergenic	40.0%
	AGGACTCATCACTTGGATTT+GGG	+	chr2_4:61268056-61268075	None:intergenic	40.0%
	TATTGACACATTGCCTATGC+TGG	-	chr2_4:61268227-61268246	Msa0339980:intron	40.0%
	TATCCACTATGATCCAGCAT+AGG	+	chr2_4:61268243-61268262	None:intergenic	40.0%
	TATTGGAGTAGAAGGGGATA+TGG	-	chr2_4:61268365-61268384	Msa0339980:intron	40.0%
	AACAATTCAACTTGGGAGAG+TGG	-	chr2_4:61268544-61268563	Msa0339980:CDS	40.0%
	ACAATTCAACTTGGGAGAGT+GGG	-	chr2_4:61268545-61268564	Msa0339980:CDS	40.0%
	TAAGGAATGGACAAGGATGT+TGG	-	chr2_4:61266938-61266957	Msa0339980:three_prime_UTR	40.0%
!	CAAGAAATGCTGGATTGGAA+AGG	-	chr2_4:61266971-61266990	Msa0339980:three_prime_UTR	40.0%
!	AAAGGTGTGGCAAAAGTTGT+AGG	-	chr2_4:61266989-61267008	Msa0339980:exon	40.0%
	GCAAAAGTTGTAGGCTAAGA+TGG	-	chr2_4:61266998-61267017	Msa0339980:CDS	40.0%
	TTGAGGCCTGATCTTAAAAG+AGG	-	chr2_4:61267030-61267049	Msa0339980:CDS	40.0%
	TGCTTTCTCAACACAAGAAG+AGG	-	chr2_4:61267053-61267072	Msa0339980:CDS	40.0%
	TCCATTCTCTACTTGGAAAC+AGG	-	chr2_4:61267091-61267110	Msa0339980:CDS	40.0%
	ACCTGTTTCCAAGTAGAGAA+TGG	+	chr2_4:61267095-61267114	None:intergenic	40.0%
	AGGACTCATCACTTGGATTT+GGG	+	chr2_4:61268056-61268075	None:intergenic	40.0%
	TATTGACACATTGCCTATGC+TGG	-	chr2_4:61268227-61268246	Msa0339980:intron	40.0%
	TATCCACTATGATCCAGCAT+AGG	+	chr2_4:61268243-61268262	None:intergenic	40.0%
	TATTGGAGTAGAAGGGGATA+TGG	-	chr2_4:61268365-61268384	Msa0339980:intron	40.0%
	AACAATTCAACTTGGGAGAG+TGG	-	chr2_4:61268544-61268563	Msa0339980:CDS	40.0%
	ACAATTCAACTTGGGAGAGT+GGG	-	chr2_4:61268545-61268564	Msa0339980:CDS	40.0%
	ACAAGGATGTTGGAGTGATG+TGG	-	chr2_4:61266948-61266967	Msa0339980:three_prime_UTR	45.0%
	AGTGATGTGGCAAGAAATGC+TGG	-	chr2_4:61266961-61266980	Msa0339980:three_prime_UTR	45.0%
	TGTGGCAAGAAATGCTGGAT+TGG	-	chr2_4:61266966-61266985	Msa0339980:three_prime_UTR	45.0%
!	AATGCTGGATTGGAAAGGTG+TGG	-	chr2_4:61266976-61266995	Msa0339980:three_prime_UTR	45.0%
	AATAGTGCGTGAGTGTCTCA+TGG	+	chr2_4:61267557-61267576	None:intergenic	45.0%
	AAATAGCAGCACGATTGCCA+GGG	-	chr2_4:61267941-61267960	Msa0339980:intron	45.0%
!!	ATTTCATTGTCGGTTCTCCC+TGG	+	chr2_4:61267961-61267980	None:intergenic	45.0%
	GGACTCATCACTTGGATTTG+GGG	+	chr2_4:61268055-61268074	None:intergenic	45.0%
	GAGGACTCATCACTTGGATT+TGG	+	chr2_4:61268057-61268076	None:intergenic	45.0%
	ATCTTTGTTAGGTTCGGGTG+AGG	+	chr2_4:61268076-61268095	None:intergenic	45.0%
	TTGCCTATGCTGGATCATAG+TGG	-	chr2_4:61268237-61268256	Msa0339980:intron	45.0%
	TGGGGTCCCATTTATTAGTC+AGG	-	chr2_4:61268691-61268710	Msa0339980:CDS	45.0%
	ACAAGGATGTTGGAGTGATG+TGG	-	chr2_4:61266948-61266967	Msa0339980:three_prime_UTR	45.0%
	AGTGATGTGGCAAGAAATGC+TGG	-	chr2_4:61266961-61266980	Msa0339980:three_prime_UTR	45.0%
	TGTGGCAAGAAATGCTGGAT+TGG	-	chr2_4:61266966-61266985	Msa0339980:three_prime_UTR	45.0%
!	AATGCTGGATTGGAAAGGTG+TGG	-	chr2_4:61266976-61266995	Msa0339980:three_prime_UTR	45.0%
	AATAGTGCGTGAGTGTCTCA+TGG	+	chr2_4:61267557-61267576	None:intergenic	45.0%
	AAATAGCAGCACGATTGCCA+GGG	-	chr2_4:61267941-61267960	Msa0339980:intron	45.0%
!!	ATTTCATTGTCGGTTCTCCC+TGG	+	chr2_4:61267961-61267980	None:intergenic	45.0%
	GGACTCATCACTTGGATTTG+GGG	+	chr2_4:61268055-61268074	None:intergenic	45.0%
	GAGGACTCATCACTTGGATT+TGG	+	chr2_4:61268057-61268076	None:intergenic	45.0%
	ATCTTTGTTAGGTTCGGGTG+AGG	+	chr2_4:61268076-61268095	None:intergenic	45.0%
	TTGCCTATGCTGGATCATAG+TGG	-	chr2_4:61268237-61268256	Msa0339980:intron	45.0%
	TGGGGTCCCATTTATTAGTC+AGG	-	chr2_4:61268691-61268710	Msa0339980:CDS	45.0%
	CAAATAGCAGCACGATTGCC+AGG	-	chr2_4:61267940-61267959	Msa0339980:intron	50.0%
	ACTTGGATTTGGGGAGGTTG+AGG	+	chr2_4:61268046-61268065	None:intergenic	50.0%
	CTCATCACTTGGATTTGGGG+AGG	+	chr2_4:61268052-61268071	None:intergenic	50.0%
	TGAAAGTAGGGGTGAGGTAG+TGG	-	chr2_4:61268506-61268525	Msa0339980:CDS	50.0%
!	CTTGGGAGAGTGGGATTTTG+AGG	-	chr2_4:61268554-61268573	Msa0339980:CDS	50.0%
	CAAATAGCAGCACGATTGCC+AGG	-	chr2_4:61267940-61267959	Msa0339980:intron	50.0%
	ACTTGGATTTGGGGAGGTTG+AGG	+	chr2_4:61268046-61268065	None:intergenic	50.0%
	CTCATCACTTGGATTTGGGG+AGG	+	chr2_4:61268052-61268071	None:intergenic	50.0%
	TGAAAGTAGGGGTGAGGTAG+TGG	-	chr2_4:61268506-61268525	Msa0339980:CDS	50.0%
!	CTTGGGAGAGTGGGATTTTG+AGG	-	chr2_4:61268554-61268573	Msa0339980:CDS	50.0%
	TGGGGAGGTTGAGGTTGTTG+TGG	+	chr2_4:61268037-61268056	None:intergenic	55.0%
	TCGGGTGAGGACTCATCACT+TGG	+	chr2_4:61268063-61268082	None:intergenic	55.0%
	TGGGGAGGTTGAGGTTGTTG+TGG	+	chr2_4:61268037-61268056	None:intergenic	55.0%
	TCGGGTGAGGACTCATCACT+TGG	+	chr2_4:61268063-61268082	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	61266801	61268811	61266801	ID=Msa0339980;Name=Msa0339980
chr2_4	mRNA	61266801	61268811	61266801	ID=Msa0339980-mRNA-1;Parent=Msa0339980;Name=Msa0339980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=22\|1\|1\|1\|1\|1\|2\|197\|323
chr2_4	exon	61266801	61267679	61266801	ID=Msa0339980-mRNA-1:exon:19182;Parent=Msa0339980-mRNA-1
chr2_4	exon	61268500	61268811	61268500	ID=Msa0339980-mRNA-1:exon:19181;Parent=Msa0339980-mRNA-1
chr2_4	five_prime_UTR	61268790	61268811	61268790	ID=Msa0339980-mRNA-1:five_prime_utr;Parent=Msa0339980-mRNA-1
chr2_4	CDS	61268500	61268789	61268500	ID=Msa0339980-mRNA-1:cds;Parent=Msa0339980-mRNA-1
chr2_4	CDS	61266998	61267679	61266998	ID=Msa0339980-mRNA-1:cds;Parent=Msa0339980-mRNA-1
chr2_4	three_prime_UTR	61266801	61266997	61266801	ID=Msa0339980-mRNA-1:three_prime_utr;Parent=Msa0339980-mRNA-1

Gene Sequence

>Msa0339980

ATGAGAAAGCCAGAGATTTGTAGTACTAAAAACAACATCAACAACATTAATAAGAAGAAGCTTAGAAAAGGGTTATGGTCACCAGAAGAAGATGAGAAACTTATGAACTATATGGTAAGGAATGGACAAGGATGTTGGAGTGATGTGGCAAGAAATGCTGGATTGGAAAGGTGTGGCAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCTGATCTTAAAAGAGGTGCTTTCTCAACACAAGAAGAGGAACTCATCATCCATTTCCATTCTCTACTTGGAAACAGATGGTCTCAAATAGCAGCACGATTGCCAGGGAGAACCGACAATGAAATAAAAAACTTTTGGAATTCAACTATAAAGAAAAGACTTAAGAACTTGTCTTCAACCACAACAACCTCAACCTCCCCAAATCCAAGTGATGAGTCCTCACCCGAACCTAACAAAGATTTGAATATACAAGGGTCCTATATTTCTACACAACATGCAAATTACAACAACTACATGAGTATGCCTATGTTCACTTCATCATCATCTCAATCACCATCAATATTGCAAAACACAATTTTCAATACCATGAATATTGACACATTGCCTATGCTGGATCATAGTGGATACTTCAACAATACAGTTACTACAATGCCATGCTTTTCGTCACAAAATCATGAGGTTGACATTAAAGGTTCTTATTTAGAAAACGGTGTGTTTGGGAGTGTAAATATTGGAGTAGAAGGGGATATGGAGAACAAGTGCAACACAGAAACTAACCATTCTGATTATTATTTTGATGACATAAAGATAAACAATATGCTTAGTAACTGCAATATTATTGAAAGCAATAATAATAATAATAATAAAATTGAAAGTAGGGGTGAGGTAGTGGAGAATTTATTTCAAGAACAATTCAACTTGGGAGAGTGGGATTTTGAGGAGTTGATGAAAGATGTTTCCTCCTTTTTATTTTCTTGA

Protein sequence

>Msa0339980

MRKPEICSTKNNINNINKKKLRKGLWSPEEDEKLMNYMVRNGQGCWSDVARNAGLERCGKSCRLRWINYLRPDLKRGAFSTQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTTTTSTSPNPSDESSPEPNKDLNIQGSYISTQHANYNNYMSMPMFTSSSSQSPSILQNTIFNTMNIDTLPMLDHSGYFNNTVTTMPCFSSQNHEVDIKGSYLENGVFGSVNIGVEGDMENKCNTETNHSDYYFDDIKINNMLSNCNIIESNNNNNNKIESRGEVVENLFQEQFNLGEWDFEELMKDVSSFLFS*