Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108790 | XP_013449167.2 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108790 | sp|Q8LED3|TBL3_ARATH | 64.133 | 421 | 145 | 2 | 13 | 427 | 14 | 434 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108790 | A0A396H185 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 872 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1108790 | 0.811151 | 8.081549e-51 | -8.615850e-47 |
| Msa0007990 | Msa1108790 | 0.816441 | 5.520597e-52 | -8.615850e-47 |
| Msa0008670 | Msa1108790 | 0.802477 | 5.506281e-49 | -8.615850e-47 |
| Msa0017510 | Msa1108790 | 0.808088 | 3.677882e-50 | -8.615850e-47 |
| Msa0018240 | Msa1108790 | 0.803910 | 2.781954e-49 | -8.615850e-47 |
| Msa0022550 | Msa1108790 | 0.828783 | 7.421368e-55 | -8.615850e-47 |
| Msa0025330 | Msa1108790 | 0.815732 | 7.952303e-52 | -8.615850e-47 |
| Msa0028170 | Msa1108790 | 0.802760 | 4.814418e-49 | -8.615850e-47 |
| Msa0045790 | Msa1108790 | 0.825649 | 4.178655e-54 | -8.615850e-47 |
| Msa0046160 | Msa1108790 | 0.821345 | 4.241331e-53 | -8.615850e-47 |
| Msa0063500 | Msa1108790 | 0.804095 | 2.546790e-49 | -8.615850e-47 |
| Msa0072900 | Msa1108790 | 0.829550 | 4.834819e-55 | -8.615850e-47 |
| Msa0074240 | Msa1108790 | 0.835101 | 2.041711e-56 | -8.615850e-47 |
| Msa0081520 | Msa1108790 | 0.820970 | 5.175045e-53 | -8.615850e-47 |
| Msa0087470 | Msa1108790 | 0.828889 | 6.994935e-55 | -8.615850e-47 |
| Msa0093400 | Msa1108790 | 0.818201 | 2.217575e-52 | -8.615850e-47 |
| Msa0094850 | Msa1108790 | 0.810356 | 1.200695e-50 | -8.615850e-47 |
| Msa0097090 | Msa1108790 | 0.816994 | 4.149904e-52 | -8.615850e-47 |
| Msa0108160 | Msa1108790 | 0.830694 | 2.542904e-55 | -8.615850e-47 |
| Msa0608400 | Msa1108790 | 0.824785 | 6.686495e-54 | -8.615850e-47 |
| Msa0609430 | Msa1108790 | 0.807688 | 4.472281e-50 | -8.615850e-47 |
| Msa0623330 | Msa1108790 | 0.803714 | 3.054931e-49 | -8.615850e-47 |
| Msa0626450 | Msa1108790 | 0.820227 | 7.666625e-53 | -8.615850e-47 |
| Msa0626490 | Msa1108790 | 0.819388 | 1.192561e-52 | -8.615850e-47 |
| Msa0626510 | Msa1108790 | 0.804776 | 1.836671e-49 | -8.615850e-47 |
| Msa0628360 | Msa1108790 | 0.813252 | 2.812154e-51 | -8.615850e-47 |
| Msa0650070 | Msa1108790 | 0.818863 | 1.569894e-52 | -8.615850e-47 |
| Msa0664600 | Msa1108790 | 0.822321 | 2.521697e-53 | -8.615850e-47 |
| Msa0683510 | Msa1108790 | 0.801218 | 9.985698e-49 | -8.615850e-47 |
| Msa0684500 | Msa1108790 | 0.824080 | 9.796761e-54 | -8.615850e-47 |
| Msa0691050 | Msa1108790 | 0.818773 | 1.645819e-52 | -8.615850e-47 |
| Msa0692060 | Msa1108790 | 0.827961 | 1.171755e-54 | -8.615850e-47 |
| Msa0693380 | Msa1108790 | 0.813493 | 2.489669e-51 | -8.615850e-47 |
| Msa0710270 | Msa1108790 | 0.803176 | 3.949117e-49 | -8.615850e-47 |
| Msa0712590 | Msa1108790 | 0.860578 | 1.873023e-63 | -8.615850e-47 |
| Msa0727640 | Msa1108790 | 0.806938 | 6.450332e-50 | -8.615850e-47 |
| Msa0745790 | Msa1108790 | 0.801019 | 1.097045e-48 | -8.615850e-47 |
| Msa0752940 | Msa1108790 | 0.855370 | 6.602109e-62 | -8.615850e-47 |
| Msa0753720 | Msa1108790 | 0.802247 | 6.141569e-49 | -8.615850e-47 |
| Msa0760130 | Msa1108790 | 0.801900 | 7.238256e-49 | -8.615850e-47 |
| Msa0767300 | Msa1108790 | 0.808955 | 2.400944e-50 | -8.615850e-47 |
| Msa0795070 | Msa1108790 | 0.809391 | 1.936967e-50 | -8.615850e-47 |
| Msa0795390 | Msa1108790 | 0.813044 | 3.124022e-51 | -8.615850e-47 |
| Msa0816710 | Msa1108790 | 0.818430 | 1.968756e-52 | -8.615850e-47 |
| Msa0824660 | Msa1108790 | 0.814783 | 1.292307e-51 | -8.615850e-47 |
| Msa0825340 | Msa1108790 | 0.802738 | 4.864224e-49 | -8.615850e-47 |
| Msa0830510 | Msa1108790 | 0.800577 | 1.350297e-48 | -8.615850e-47 |
| Msa0834880 | Msa1108790 | 0.801506 | 8.719040e-49 | -8.615850e-47 |
| Msa0839190 | Msa1108790 | 0.842395 | 2.654701e-58 | -8.615850e-47 |
| Msa0121090 | Msa1108790 | 0.819000 | 1.461297e-52 | -8.615850e-47 |
| Msa0123100 | Msa1108790 | 0.826490 | 2.637161e-54 | -8.615850e-47 |
| Msa0134210 | Msa1108790 | 0.802373 | 5.787108e-49 | -8.615850e-47 |
| Msa0146740 | Msa1108790 | 0.800600 | 1.335393e-48 | -8.615850e-47 |
| Msa0149300 | Msa1108790 | 0.819773 | 9.739495e-53 | -8.615850e-47 |
| Msa0154320 | Msa1108790 | 0.827478 | 1.530164e-54 | -8.615850e-47 |
| Msa0157290 | Msa1108790 | 0.808561 | 2.915557e-50 | -8.615850e-47 |
| Msa0160130 | Msa1108790 | 0.814544 | 1.459888e-51 | -8.615850e-47 |
| Msa0164980 | Msa1108790 | 0.801549 | 8.543712e-49 | -8.615850e-47 |
| Msa0170140 | Msa1108790 | 0.812134 | 4.939153e-51 | -8.615850e-47 |
| Msa0173890 | Msa1108790 | 0.825714 | 4.032126e-54 | -8.615850e-47 |
| Msa0174320 | Msa1108790 | 0.825560 | 4.385596e-54 | -8.615850e-47 |
| Msa0186640 | Msa1108790 | 0.815491 | 8.994845e-52 | -8.615850e-47 |
| Msa0187030 | Msa1108790 | 0.814445 | 1.535182e-51 | -8.615850e-47 |
| Msa0199960 | Msa1108790 | 0.811360 | 7.279397e-51 | -8.615850e-47 |
| Msa0206840 | Msa1108790 | 0.800348 | 1.503686e-48 | -8.615850e-47 |
| Msa0218810 | Msa1108790 | 0.842665 | 2.250346e-58 | -8.615850e-47 |
| Msa0223690 | Msa1108790 | 0.812954 | 3.268685e-51 | -8.615850e-47 |
| Msa0225320 | Msa1108790 | 0.821086 | 4.867302e-53 | -8.615850e-47 |
| Msa0366240 | Msa1108790 | 0.824383 | 8.313695e-54 | -8.615850e-47 |
| Msa0378720 | Msa1108790 | 0.812867 | 3.415783e-51 | -8.615850e-47 |
| Msa0388960 | Msa1108790 | 0.803237 | 3.835935e-49 | -8.615850e-47 |
| Msa0389880 | Msa1108790 | 0.847046 | 1.480975e-59 | -8.615850e-47 |
| Msa0389910 | Msa1108790 | 0.817324 | 3.497438e-52 | -8.615850e-47 |
| Msa0392380 | Msa1108790 | 0.828468 | 8.842392e-55 | -8.615850e-47 |
| Msa0417270 | Msa1108790 | 0.801115 | 1.048303e-48 | -8.615850e-47 |
| Msa0417880 | Msa1108790 | 0.827799 | 1.281408e-54 | -8.615850e-47 |
| Msa0440320 | Msa1108790 | 0.824691 | 7.037118e-54 | -8.615850e-47 |
| Msa0458480 | Msa1108790 | 0.813882 | 2.043958e-51 | -8.615850e-47 |
| Msa0460480 | Msa1108790 | 0.803892 | 2.806775e-49 | -8.615850e-47 |
| Msa1024740 | Msa1108790 | 0.945776 | 1.619539e-104 | -8.615850e-47 |
| Msa1029420 | Msa1108790 | 0.811099 | 8.291494e-51 | -8.615850e-47 |
| Msa1031930 | Msa1108790 | 0.841768 | 3.888623e-58 | -8.615850e-47 |
| Msa1063500 | Msa1108790 | 0.889382 | 2.547649e-73 | -8.615850e-47 |
| Msa1068280 | Msa1108790 | 0.803088 | 4.118251e-49 | -8.615850e-47 |
| Msa1071770 | Msa1108790 | 0.810678 | 1.023167e-50 | -8.615850e-47 |
| Msa1082500 | Msa1108790 | 0.820596 | 6.309978e-53 | -8.615850e-47 |
| Msa1095510 | Msa1108790 | 0.802869 | 4.571175e-49 | -8.615850e-47 |
| Msa0242490 | Msa1108790 | 0.806015 | 1.009747e-49 | -8.615850e-47 |
| Msa0243600 | Msa1108790 | 0.837838 | 4.103304e-57 | -8.615850e-47 |
| Msa0248970 | Msa1108790 | 0.813815 | 2.114674e-51 | -8.615850e-47 |
| Msa0251080 | Msa1108790 | 0.828256 | 9.949108e-55 | -8.615850e-47 |
| Msa0258310 | Msa1108790 | 0.814136 | 1.796249e-51 | -8.615850e-47 |
| Msa0264780 | Msa1108790 | 0.808908 | 2.457798e-50 | -8.615850e-47 |
| Msa0276920 | Msa1108790 | 0.831800 | 1.359033e-55 | -8.615850e-47 |
| Msa0282220 | Msa1108790 | 0.803131 | 4.035724e-49 | -8.615850e-47 |
| Msa0283450 | Msa1108790 | 0.810475 | 1.131877e-50 | -8.615850e-47 |
| Msa0284520 | Msa1108790 | 0.804258 | 2.354943e-49 | -8.615850e-47 |
| Msa0297790 | Msa1108790 | 0.809963 | 1.459033e-50 | -8.615850e-47 |
| Msa0300180 | Msa1108790 | 0.800084 | 1.700934e-48 | -8.615850e-47 |
| Msa0300690 | Msa1108790 | 0.805322 | 1.411969e-49 | -8.615850e-47 |
| Msa0316800 | Msa1108790 | 0.806940 | 6.444265e-50 | -8.615850e-47 |
| Msa0317730 | Msa1108790 | 0.800742 | 1.249692e-48 | -8.615850e-47 |
| Msa0319940 | Msa1108790 | 0.825342 | 4.939108e-54 | -8.615850e-47 |
| Msa0332000 | Msa1108790 | 0.802928 | 4.445350e-49 | -8.615850e-47 |
| Msa0333070 | Msa1108790 | 0.813809 | 2.120793e-51 | -8.615850e-47 |
| Msa0334040 | Msa1108790 | 0.803825 | 2.898112e-49 | -8.615850e-47 |
| Msa0335800 | Msa1108790 | 0.823834 | 1.118906e-53 | -8.615850e-47 |
| Msa0337540 | Msa1108790 | 0.811743 | 6.009101e-51 | -8.615850e-47 |
| Msa0341910 | Msa1108790 | 0.825036 | 5.833624e-54 | -8.615850e-47 |
| Msa0342010 | Msa1108790 | 0.800206 | 1.606502e-48 | -8.615850e-47 |
| Msa0358890 | Msa1108790 | 0.803657 | 3.140336e-49 | -8.615850e-47 |
| Msa1108790 | Msa1113800 | 0.820605 | 6.280495e-53 | -8.615850e-47 |
| Msa1108790 | Msa1123380 | 0.800032 | 1.743463e-48 | -8.615850e-47 |
| Msa1108790 | Msa1124310 | 0.801934 | 7.122652e-49 | -8.615850e-47 |
| Msa1108790 | Msa1125940 | 0.831182 | 1.929905e-55 | -8.615850e-47 |
| Msa1108790 | Msa1130550 | 0.817061 | 4.008049e-52 | -8.615850e-47 |
| Msa1108790 | Msa1147900 | 0.814129 | 1.802919e-51 | -8.615850e-47 |
| Msa1108790 | Msa1151910 | 0.811004 | 8.693858e-51 | -8.615850e-47 |
| Msa1108790 | Msa1152510 | 0.910121 | 2.669840e-82 | -8.615850e-47 |
| Msa1108790 | Msa1152990 | 0.804342 | 2.261994e-49 | -8.615850e-47 |
| Msa1108790 | Msa1158310 | 0.810408 | 1.170010e-50 | -8.615850e-47 |
| Msa1108790 | Msa1158830 | 0.809116 | 2.218127e-50 | -8.615850e-47 |
| Msa1108790 | Msa1160500 | 0.811634 | 6.348412e-51 | -8.615850e-47 |
| Msa1108790 | Msa1199570 | 0.808620 | 2.831527e-50 | -8.615850e-47 |
| Msa1108790 | Msa1208430 | 0.805676 | 1.189634e-49 | -8.615850e-47 |
| Msa1108790 | Msa1221050 | 0.811970 | 5.363920e-51 | -8.615850e-47 |
| Msa1108790 | Msa1227150 | 0.801470 | 8.868579e-49 | -8.615850e-47 |
| Msa1108790 | Msa1231240 | 0.819802 | 9.594041e-53 | -8.615850e-47 |
| Msa1108790 | Msa1276660 | 0.800921 | 1.148438e-48 | -8.615850e-47 |
| Msa1108790 | Msa1279420 | 0.815121 | 1.087538e-51 | -8.615850e-47 |
| Msa1108790 | Msa1298370 | 0.813827 | 2.101334e-51 | -8.615850e-47 |
| Msa1108790 | Msa1307210 | 0.817727 | 2.837746e-52 | -8.615850e-47 |
| Msa1108790 | Msa1308140 | 0.803786 | 2.951813e-49 | -8.615850e-47 |
| Msa1108790 | Msa1311960 | 0.814766 | 1.303415e-51 | -8.615850e-47 |
| Msa1108790 | Msa1328710 | 0.805089 | 1.579833e-49 | -8.615850e-47 |
| Msa1108790 | Msa1332000 | 0.801477 | 8.838431e-49 | -8.615850e-47 |
| Msa1108790 | Msa1341520 | 0.821968 | 3.044806e-53 | -8.615850e-47 |
| Msa1108790 | Msa1349550 | 0.839428 | 1.594089e-57 | -8.615850e-47 |
| Msa1108790 | Msa1353460 | 0.802057 | 6.719278e-49 | -8.615850e-47 |
| Msa1108790 | Msa1353470 | 0.859247 | 4.719418e-63 | -8.615850e-47 |
| Msa1108790 | Msa1355800 | 0.825285 | 5.094174e-54 | -8.615850e-47 |
| Msa1108790 | Msa1356830 | 0.822417 | 2.395452e-53 | -8.615850e-47 |
| Msa1108790 | Msa1366600 | 0.802167 | 6.379276e-49 | -8.615850e-47 |
| Msa1108790 | Msa1368430 | 0.802862 | 4.587543e-49 | -8.615850e-47 |
| Msa1108790 | Msa1370090 | 0.809454 | 1.877684e-50 | -8.615850e-47 |
| Msa1108790 | Msa1371640 | 0.802640 | 5.096024e-49 | -8.615850e-47 |
| Msa1108790 | Msa1399160 | 0.800025 | 1.749144e-48 | -8.615850e-47 |
| Msa1108790 | Msa1409700 | 0.805027 | 1.627428e-49 | -8.615850e-47 |
| Msa1108790 | Msa1409870 | 0.807642 | 4.575734e-50 | -8.615850e-47 |
| Msa1108790 | Msa1410210 | 0.810881 | 9.243446e-51 | -8.615850e-47 |
| Msa1108790 | Msa1423880 | 0.801488 | 8.795702e-49 | -8.615850e-47 |
| Msa1108790 | Msa1436480 | 0.827544 | 1.475871e-54 | -8.615850e-47 |
| Msa1108790 | Msa1440960 | 0.807188 | 5.711508e-50 | -8.615850e-47 |
| Msa1108790 | Msa1457430 | 0.810720 | 1.001800e-50 | -8.615850e-47 |
| Msa1108790 | Msa1460020 | 0.806333 | 8.657464e-50 | -8.615850e-47 |
| Msa1108790 | Msa1461300 | 0.803178 | 3.945512e-49 | -8.615850e-47 |
| Msa0484780 | Msa1108790 | 0.821532 | 3.841100e-53 | -8.615850e-47 |
| Msa0487500 | Msa1108790 | 0.831573 | 1.546165e-55 | -8.615850e-47 |
| Msa0488790 | Msa1108790 | 0.816632 | 5.003913e-52 | -8.615850e-47 |
| Msa0505770 | Msa1108790 | 0.803477 | 3.421359e-49 | -8.615850e-47 |
| Msa0509610 | Msa1108790 | 0.805024 | 1.629441e-49 | -8.615850e-47 |
| Msa0540980 | Msa1108790 | 0.811410 | 7.099599e-51 | -8.615850e-47 |
| Msa0544660 | Msa1108790 | 0.810464 | 1.137889e-50 | -8.615850e-47 |
| Msa0548620 | Msa1108790 | 0.821725 | 3.465769e-53 | -8.615850e-47 |
| Msa0557070 | Msa1108790 | 0.828298 | 9.715123e-55 | -8.615850e-47 |
| Msa0569200 | Msa1108790 | 0.807362 | 5.245146e-50 | -8.615850e-47 |
| Msa0573380 | Msa1108790 | 0.811037 | 8.551888e-51 | -8.615850e-47 |
| Msa0579660 | Msa1108790 | 0.802548 | 5.324055e-49 | -8.615850e-47 |
| Msa0587940 | Msa1108790 | 0.806442 | 8.209338e-50 | -8.615850e-47 |
| Msa0861510 | Msa1108790 | 0.800444 | 1.437243e-48 | -8.615850e-47 |
| Msa0861600 | Msa1108790 | 0.812948 | 3.278734e-51 | -8.615850e-47 |
| Msa0863930 | Msa1108790 | 0.801710 | 7.919960e-49 | -8.615850e-47 |
| Msa0866520 | Msa1108790 | 0.811824 | 5.769197e-51 | -8.615850e-47 |
| Msa0870530 | Msa1108790 | 0.817150 | 3.828499e-52 | -8.615850e-47 |
| Msa0880140 | Msa1108790 | 0.809773 | 1.603597e-50 | -8.615850e-47 |
| Msa0880950 | Msa1108790 | 0.810820 | 9.533181e-51 | -8.615850e-47 |
| Msa0898750 | Msa1108790 | 0.802991 | 4.313800e-49 | -8.615850e-47 |
| Msa0900730 | Msa1108790 | 0.816377 | 5.706166e-52 | -8.615850e-47 |
| Msa0903700 | Msa1108790 | 0.804366 | 2.236055e-49 | -8.615850e-47 |
| Msa0926340 | Msa1108790 | 0.817533 | 3.138281e-52 | -8.615850e-47 |
| Msa0926890 | Msa1108790 | 0.817183 | 3.763872e-52 | -8.615850e-47 |
| Msa0928130 | Msa1108790 | 0.801367 | 9.308586e-49 | -8.615850e-47 |
| Msa0934890 | Msa1108790 | 0.810987 | 8.771225e-51 | -8.615850e-47 |
| Msa0936390 | Msa1108790 | 0.802142 | 6.454183e-49 | -8.615850e-47 |
| Msa0939000 | Msa1108790 | 0.801690 | 7.992407e-49 | -8.615850e-47 |
| Msa0964310 | Msa1108790 | 0.810492 | 1.122191e-50 | -8.615850e-47 |
| Msa0969520 | Msa1108790 | 0.825067 | 5.737098e-54 | -8.615850e-47 |
| Msa0974060 | Msa1108790 | 0.829612 | 4.669226e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108790 | MtrunA17_Chr7g0242701 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 872 |
| Msa1108790 | MtrunA17_Chr4g0006991 | 77.986 | 427 | 94 | 0 | 1 | 427 | 1 | 427 | 0.0 | 700 |
| Msa1108790 | MtrunA17_Chr8g0360521 | 45.278 | 413 | 206 | 5 | 16 | 427 | 16 | 409 | 1.44e-129 | 380 |
| Msa1108790 | MtrunA17_Chr5g0437601 | 41.784 | 426 | 236 | 6 | 3 | 427 | 10 | 424 | 1.11e-127 | 375 |
| Msa1108790 | MtrunA17_Chr3g0113671 | 47.688 | 346 | 179 | 2 | 84 | 427 | 104 | 449 | 6.57e-125 | 369 |
| Msa1108790 | MtrunA17_Chr3g0114101 | 39.765 | 425 | 255 | 1 | 3 | 427 | 7 | 430 | 1.66e-118 | 352 |
| Msa1108790 | MtrunA17_Chr5g0437291 | 46.132 | 349 | 183 | 3 | 84 | 427 | 163 | 511 | 4.90e-118 | 354 |
| Msa1108790 | MtrunA17_Chr4g0005481 | 46.532 | 346 | 180 | 4 | 83 | 427 | 105 | 446 | 1.69e-111 | 335 |
| Msa1108790 | MtrunA17_Chr4g0005491 | 45.559 | 349 | 182 | 5 | 85 | 427 | 61 | 407 | 1.95e-110 | 331 |
| Msa1108790 | MtrunA17_Chr7g0243301 | 43.343 | 353 | 192 | 5 | 81 | 427 | 59 | 409 | 2.88e-108 | 325 |
| Msa1108790 | MtrunA17_Chr1g0210771 | 40.634 | 347 | 182 | 8 | 84 | 427 | 57 | 382 | 9.15e-90 | 277 |
| Msa1108790 | MtrunA17_Chr1g0171171 | 39.655 | 348 | 185 | 8 | 83 | 427 | 50 | 375 | 2.05e-86 | 268 |
| Msa1108790 | MtrunA17_Chr3g0105301 | 38.150 | 346 | 198 | 6 | 86 | 427 | 43 | 376 | 1.76e-85 | 266 |
| Msa1108790 | MtrunA17_Chr5g0430371 | 37.883 | 359 | 197 | 10 | 82 | 427 | 54 | 399 | 2.62e-82 | 258 |
| Msa1108790 | MtrunA17_Chr3g0097891 | 36.599 | 347 | 198 | 6 | 81 | 427 | 26 | 350 | 5.69e-82 | 256 |
| Msa1108790 | MtrunA17_Chr5g0413271 | 37.197 | 371 | 211 | 10 | 64 | 427 | 121 | 476 | 1.42e-78 | 251 |
| Msa1108790 | MtrunA17_Chr4g0041011 | 36.550 | 342 | 192 | 7 | 86 | 427 | 47 | 363 | 1.05e-75 | 240 |
| Msa1108790 | MtrunA17_Chr7g0269991 | 36.390 | 349 | 197 | 9 | 86 | 427 | 137 | 467 | 1.07e-75 | 243 |
| Msa1108790 | MtrunA17_Chr7g0258851 | 36.752 | 351 | 204 | 8 | 85 | 427 | 247 | 587 | 1.08e-74 | 244 |
| Msa1108790 | MtrunA17_Chr4g0071391 | 35.613 | 351 | 208 | 7 | 84 | 427 | 107 | 446 | 1.81e-74 | 239 |
| Msa1108790 | MtrunA17_Chr1g0175671 | 37.322 | 351 | 202 | 9 | 85 | 427 | 169 | 509 | 1.84e-74 | 241 |
| Msa1108790 | MtrunA17_Chr5g0413851 | 38.304 | 342 | 187 | 9 | 86 | 427 | 42 | 359 | 1.20e-73 | 234 |
| Msa1108790 | MtrunA17_Chr2g0314801 | 36.127 | 346 | 198 | 7 | 83 | 427 | 30 | 353 | 1.25e-73 | 234 |
| Msa1108790 | MtrunA17_Chr2g0325481 | 35.652 | 345 | 197 | 8 | 83 | 427 | 47 | 366 | 2.08e-73 | 234 |
| Msa1108790 | MtrunA17_Chr4g0045941 | 35.362 | 345 | 199 | 7 | 83 | 427 | 30 | 350 | 5.32e-73 | 233 |
| Msa1108790 | MtrunA17_Chr4g0068111 | 33.242 | 364 | 224 | 6 | 71 | 427 | 102 | 453 | 4.99e-72 | 234 |
| Msa1108790 | MtrunA17_Chr4g0045951 | 35.965 | 342 | 195 | 7 | 86 | 427 | 45 | 362 | 1.12e-71 | 229 |
| Msa1108790 | MtrunA17_Chr2g0283581 | 35.072 | 345 | 199 | 8 | 83 | 427 | 39 | 358 | 2.18e-71 | 229 |
| Msa1108790 | MtrunA17_Chr1g0213281 | 32.187 | 407 | 241 | 11 | 32 | 427 | 133 | 515 | 3.31e-71 | 233 |
| Msa1108790 | MtrunA17_Chr3g0085071 | 35.714 | 350 | 193 | 10 | 82 | 427 | 42 | 363 | 6.32e-71 | 228 |
| Msa1108790 | MtrunA17_Chr3g0085081 | 35.143 | 350 | 195 | 10 | 82 | 427 | 27 | 348 | 8.89e-71 | 227 |
| Msa1108790 | MtrunA17_Chr2g0287901 | 37.534 | 365 | 195 | 10 | 79 | 427 | 90 | 437 | 9.90e-71 | 230 |
| Msa1108790 | MtrunA17_Chr2g0314791 | 35.714 | 350 | 188 | 9 | 84 | 427 | 27 | 345 | 1.72e-69 | 223 |
| Msa1108790 | MtrunA17_Chr3g0091031 | 34.770 | 348 | 195 | 10 | 82 | 425 | 27 | 346 | 2.35e-69 | 223 |
| Msa1108790 | MtrunA17_Chr8g0368461 | 35.165 | 364 | 205 | 9 | 84 | 427 | 176 | 528 | 9.14e-68 | 224 |
| Msa1108790 | MtrunA17_Chr3g0126021 | 31.066 | 441 | 257 | 12 | 6 | 427 | 47 | 459 | 4.90e-66 | 218 |
| Msa1108790 | MtrunA17_Chr7g0259711 | 32.033 | 359 | 216 | 8 | 83 | 427 | 88 | 432 | 3.34e-63 | 210 |
| Msa1108790 | MtrunA17_Chr8g0384151 | 31.909 | 351 | 210 | 6 | 84 | 427 | 88 | 416 | 6.56e-63 | 209 |
| Msa1108790 | MtrunA17_Chr1g0209921 | 37.553 | 237 | 136 | 6 | 83 | 317 | 41 | 267 | 2.54e-50 | 171 |
| Msa1108790 | MtrunA17_Chr1g0178081 | 29.812 | 426 | 180 | 16 | 25 | 427 | 12 | 341 | 1.75e-48 | 169 |
| Msa1108790 | MtrunA17_Chr8g0391481 | 30.685 | 365 | 215 | 14 | 84 | 427 | 25 | 372 | 6.00e-43 | 155 |
| Msa1108790 | MtrunA17_Chr5g0414091 | 31.117 | 376 | 207 | 15 | 81 | 427 | 79 | 431 | 1.95e-42 | 154 |
| Msa1108790 | MtrunA17_Chr5g0414051 | 28.906 | 384 | 215 | 15 | 75 | 427 | 64 | 420 | 2.27e-40 | 149 |
| Msa1108790 | MtrunA17_Chr5g0414061 | 30.447 | 358 | 222 | 13 | 85 | 427 | 93 | 438 | 2.88e-40 | 149 |
| Msa1108790 | MtrunA17_Chr7g0226991 | 28.676 | 408 | 237 | 17 | 53 | 427 | 16 | 402 | 3.82e-39 | 145 |
| Msa1108790 | MtrunA17_Chr8g0347321 | 26.744 | 430 | 269 | 14 | 28 | 427 | 26 | 439 | 1.99e-38 | 144 |
| Msa1108790 | MtrunA17_Chr3g0140371 | 29.891 | 368 | 207 | 14 | 86 | 427 | 18 | 360 | 4.03e-38 | 141 |
| Msa1108790 | MtrunA17_Chr8g0387921 | 25.293 | 427 | 278 | 12 | 20 | 427 | 15 | 419 | 4.52e-38 | 142 |
| Msa1108790 | MtrunA17_Chr6g0456691 | 28.972 | 428 | 254 | 17 | 20 | 427 | 22 | 419 | 1.25e-37 | 141 |
| Msa1108790 | MtrunA17_Chr5g0414041 | 30.939 | 362 | 225 | 14 | 81 | 427 | 82 | 433 | 2.21e-36 | 138 |
| Msa1108790 | MtrunA17_Chr6g0456681 | 30.194 | 361 | 223 | 12 | 83 | 427 | 61 | 408 | 4.93e-35 | 134 |
| Msa1108790 | MtrunA17_Chr6g0476041 | 25.485 | 412 | 261 | 15 | 40 | 427 | 125 | 514 | 6.16e-35 | 135 |
| Msa1108790 | MtrunA17_Chr2g0283851 | 29.223 | 373 | 204 | 15 | 87 | 427 | 56 | 400 | 6.82e-35 | 133 |
| Msa1108790 | MtrunA17_Chr1g0188191 | 25.479 | 365 | 232 | 14 | 86 | 427 | 234 | 581 | 1.20e-33 | 132 |
| Msa1108790 | MtrunA17_Chr4g0070341 | 27.596 | 366 | 215 | 13 | 86 | 427 | 132 | 471 | 1.18e-32 | 128 |
| Msa1108790 | MtrunA17_Chr8g0384421 | 25.737 | 373 | 219 | 14 | 83 | 427 | 130 | 472 | 1.51e-32 | 128 |
| Msa1108790 | MtrunA17_Chr4g0049421 | 26.975 | 367 | 221 | 15 | 86 | 427 | 48 | 392 | 1.23e-31 | 124 |
| Msa1108790 | MtrunA17_Chr6g0451321 | 25.348 | 359 | 242 | 10 | 82 | 427 | 112 | 457 | 1.15e-29 | 120 |
| Msa1108790 | MtrunA17_Chr6g0455901 | 26.446 | 363 | 233 | 12 | 84 | 427 | 69 | 416 | 1.55e-28 | 116 |
| Msa1108790 | MtrunA17_Chr7g0221271 | 32.273 | 220 | 116 | 6 | 7 | 213 | 6 | 205 | 1.17e-24 | 100 |
| Msa1108790 | MtrunA17_Chr7g0221291 | 44.330 | 97 | 53 | 1 | 82 | 178 | 75 | 170 | 2.98e-22 | 93.2 |
| Msa1108790 | MtrunA17_Chr2g0287931 | 35.484 | 124 | 73 | 1 | 148 | 264 | 3 | 126 | 3.52e-16 | 74.7 |
| Msa1108790 | MtrunA17_Chr3g0085101 | 34.906 | 106 | 61 | 2 | 284 | 386 | 6 | 106 | 1.42e-15 | 72.8 |
| Msa1108790 | MtrunA17_Chr1g0209931 | 35.294 | 102 | 50 | 2 | 326 | 427 | 7 | 92 | 6.88e-14 | 67.4 |
| Msa1108790 | MtrunA17_Chr5g0429211 | 41.096 | 73 | 43 | 0 | 142 | 214 | 195 | 267 | 6.48e-12 | 65.9 |
| Msa1108790 | MtrunA17_Chr5g0429191 | 54.167 | 48 | 17 | 2 | 374 | 420 | 2 | 45 | 6.31e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108790 | AT5G01360.1 | 64.133 | 421 | 145 | 2 | 13 | 427 | 14 | 434 | 0.0 | 565 |
| Msa1108790 | AT5G01360.2 | 70.056 | 354 | 105 | 1 | 75 | 427 | 25 | 378 | 0.0 | 544 |
| Msa1108790 | AT1G73140.1 | 48.159 | 353 | 175 | 3 | 76 | 427 | 60 | 405 | 4.09e-126 | 371 |
| Msa1108790 | AT3G55990.1 | 47.207 | 358 | 187 | 2 | 68 | 423 | 122 | 479 | 1.74e-124 | 370 |
| Msa1108790 | AT2G40150.1 | 47.989 | 348 | 173 | 2 | 84 | 423 | 69 | 416 | 1.15e-122 | 363 |
| Msa1108790 | AT2G40320.1 | 38.929 | 411 | 241 | 1 | 17 | 427 | 22 | 422 | 7.74e-118 | 350 |
| Msa1108790 | AT3G11030.1 | 44.348 | 345 | 191 | 1 | 84 | 427 | 104 | 448 | 1.15e-114 | 343 |
| Msa1108790 | AT2G40160.1 | 44.058 | 345 | 188 | 5 | 84 | 423 | 75 | 419 | 3.34e-109 | 328 |
| Msa1108790 | AT2G40160.2 | 43.840 | 349 | 191 | 5 | 84 | 427 | 75 | 423 | 3.98e-109 | 329 |
| Msa1108790 | AT5G01620.2 | 40.648 | 401 | 215 | 9 | 36 | 427 | 63 | 449 | 1.03e-108 | 328 |
| Msa1108790 | AT5G01620.1 | 40.648 | 401 | 215 | 9 | 36 | 427 | 63 | 449 | 1.03e-108 | 328 |
| Msa1108790 | AT5G01620.3 | 43.678 | 348 | 190 | 5 | 82 | 427 | 114 | 457 | 1.47e-107 | 325 |
| Msa1108790 | AT2G38320.1 | 42.618 | 359 | 198 | 5 | 75 | 427 | 48 | 404 | 3.28e-105 | 318 |
| Msa1108790 | AT2G38320.2 | 43.750 | 320 | 172 | 5 | 114 | 427 | 4 | 321 | 6.57e-95 | 288 |
| Msa1108790 | AT5G58600.1 | 37.571 | 354 | 204 | 8 | 79 | 427 | 59 | 400 | 3.32e-84 | 263 |
| Msa1108790 | AT2G30900.1 | 40.290 | 345 | 181 | 9 | 86 | 427 | 43 | 365 | 2.93e-83 | 260 |
| Msa1108790 | AT3G54260.1 | 38.551 | 345 | 188 | 8 | 86 | 427 | 51 | 374 | 6.33e-82 | 257 |
| Msa1108790 | AT3G62390.1 | 37.784 | 352 | 196 | 9 | 84 | 427 | 136 | 472 | 2.21e-81 | 258 |
| Msa1108790 | AT1G78710.1 | 36.705 | 346 | 196 | 7 | 82 | 427 | 34 | 356 | 4.66e-80 | 251 |
| Msa1108790 | AT5G20590.1 | 36.676 | 349 | 204 | 6 | 86 | 427 | 141 | 479 | 1.09e-78 | 252 |
| Msa1108790 | AT3G12060.1 | 35.509 | 383 | 217 | 8 | 52 | 427 | 176 | 535 | 2.13e-78 | 253 |
| Msa1108790 | AT2G34070.1 | 34.493 | 345 | 203 | 5 | 83 | 427 | 62 | 383 | 5.25e-77 | 244 |
| Msa1108790 | AT2G31110.2 | 34.985 | 343 | 199 | 8 | 85 | 427 | 44 | 362 | 1.26e-76 | 243 |
| Msa1108790 | AT5G06700.1 | 35.677 | 384 | 222 | 9 | 52 | 427 | 228 | 594 | 2.07e-76 | 249 |
| Msa1108790 | AT2G42570.1 | 34.571 | 350 | 205 | 8 | 78 | 427 | 39 | 364 | 3.30e-76 | 242 |
| Msa1108790 | AT5G49340.1 | 38.136 | 354 | 195 | 10 | 86 | 427 | 100 | 441 | 5.35e-76 | 244 |
| Msa1108790 | AT1G29050.1 | 34.493 | 345 | 202 | 6 | 83 | 427 | 58 | 378 | 1.01e-74 | 238 |
| Msa1108790 | AT3G14850.2 | 35.484 | 341 | 199 | 6 | 83 | 423 | 31 | 350 | 7.82e-73 | 233 |
| Msa1108790 | AT1G48880.1 | 35.795 | 352 | 191 | 9 | 85 | 427 | 114 | 439 | 6.54e-72 | 233 |
| Msa1108790 | AT2G30010.1 | 36.813 | 364 | 199 | 11 | 79 | 427 | 49 | 396 | 1.04e-71 | 231 |
| Msa1108790 | AT2G30010.2 | 36.813 | 364 | 199 | 11 | 79 | 427 | 92 | 439 | 2.07e-71 | 231 |
| Msa1108790 | AT2G40160.3 | 44.538 | 238 | 129 | 3 | 84 | 318 | 75 | 312 | 2.65e-71 | 227 |
| Msa1108790 | AT1G60790.1 | 33.512 | 373 | 217 | 10 | 71 | 427 | 175 | 532 | 5.99e-68 | 225 |
| Msa1108790 | AT3G06080.2 | 34.930 | 355 | 206 | 9 | 86 | 427 | 103 | 445 | 1.35e-62 | 209 |
| Msa1108790 | AT5G19160.1 | 33.894 | 357 | 210 | 7 | 86 | 427 | 99 | 444 | 4.18e-61 | 205 |
| Msa1108790 | AT5G06230.2 | 33.884 | 363 | 206 | 10 | 83 | 427 | 18 | 364 | 1.77e-60 | 201 |
| Msa1108790 | AT5G06230.1 | 33.978 | 362 | 207 | 9 | 83 | 427 | 59 | 405 | 4.27e-60 | 201 |
| Msa1108790 | AT3G62390.2 | 37.860 | 243 | 140 | 4 | 84 | 319 | 136 | 374 | 4.82e-57 | 193 |
| Msa1108790 | AT1G78710.2 | 31.214 | 346 | 162 | 8 | 82 | 427 | 27 | 296 | 1.32e-55 | 186 |
| Msa1108790 | AT2G30900.2 | 42.035 | 226 | 120 | 6 | 86 | 309 | 43 | 259 | 2.60e-54 | 182 |
| Msa1108790 | AT5G58600.2 | 38.174 | 241 | 140 | 5 | 79 | 318 | 59 | 291 | 4.58e-54 | 182 |
| Msa1108790 | AT3G11570.1 | 32.456 | 342 | 194 | 10 | 103 | 427 | 98 | 419 | 1.39e-53 | 184 |
| Msa1108790 | AT2G31110.3 | 35.556 | 225 | 136 | 4 | 85 | 309 | 44 | 259 | 4.23e-52 | 176 |
| Msa1108790 | AT5G20590.2 | 36.667 | 240 | 143 | 3 | 86 | 318 | 141 | 378 | 1.65e-51 | 178 |
| Msa1108790 | AT2G34070.2 | 32.103 | 271 | 162 | 4 | 157 | 427 | 1 | 249 | 5.17e-51 | 172 |
| Msa1108790 | AT3G14850.1 | 32.959 | 267 | 159 | 5 | 157 | 423 | 1 | 247 | 4.01e-47 | 162 |
| Msa1108790 | AT5G19160.2 | 36.667 | 240 | 143 | 3 | 86 | 318 | 99 | 336 | 7.29e-47 | 165 |
| Msa1108790 | AT3G06080.1 | 37.344 | 241 | 140 | 5 | 86 | 318 | 103 | 340 | 2.73e-45 | 160 |
| Msa1108790 | AT5G64020.1 | 28.997 | 369 | 218 | 16 | 86 | 427 | 57 | 408 | 5.06e-41 | 150 |
| Msa1108790 | AT1G70230.1 | 28.169 | 355 | 228 | 9 | 82 | 427 | 75 | 411 | 6.34e-41 | 150 |
| Msa1108790 | AT2G31110.1 | 33.621 | 232 | 131 | 7 | 196 | 427 | 6 | 214 | 5.27e-39 | 140 |
| Msa1108790 | AT5G06230.3 | 32.669 | 251 | 150 | 5 | 83 | 318 | 59 | 305 | 6.23e-39 | 142 |
| Msa1108790 | AT2G14530.1 | 26.722 | 363 | 233 | 10 | 83 | 427 | 59 | 406 | 3.53e-37 | 140 |
| Msa1108790 | AT2G37720.1 | 27.957 | 372 | 216 | 15 | 81 | 427 | 138 | 482 | 6.58e-37 | 140 |
| Msa1108790 | AT1G01430.1 | 27.348 | 362 | 236 | 12 | 83 | 427 | 96 | 447 | 7.10e-37 | 140 |
| Msa1108790 | AT5G64470.3 | 27.401 | 354 | 231 | 13 | 86 | 427 | 55 | 394 | 2.94e-36 | 137 |
| Msa1108790 | AT5G15890.1 | 27.708 | 397 | 245 | 13 | 50 | 427 | 149 | 522 | 4.62e-35 | 136 |
| Msa1108790 | AT3G02440.1 | 27.978 | 361 | 222 | 13 | 86 | 427 | 127 | 468 | 2.44e-34 | 134 |
| Msa1108790 | AT3G02440.2 | 27.978 | 361 | 222 | 13 | 86 | 427 | 135 | 476 | 2.59e-34 | 134 |
| Msa1108790 | AT4G25360.1 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 6.83e-34 | 133 |
| Msa1108790 | AT4G25360.2 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 6.83e-34 | 133 |
| Msa1108790 | AT4G01080.1 | 24.432 | 352 | 244 | 10 | 83 | 424 | 88 | 427 | 3.26e-33 | 130 |
| Msa1108790 | AT5G64470.2 | 27.072 | 362 | 228 | 15 | 86 | 427 | 55 | 400 | 1.15e-32 | 128 |
| Msa1108790 | AT5G51640.1 | 26.329 | 395 | 240 | 16 | 59 | 427 | 119 | 488 | 1.55e-32 | 129 |
| Msa1108790 | AT5G20680.6 | 25.064 | 391 | 252 | 15 | 55 | 427 | 90 | 457 | 1.83e-31 | 125 |
| Msa1108790 | AT4G23790.1 | 26.400 | 375 | 229 | 14 | 80 | 427 | 73 | 427 | 2.05e-31 | 125 |
| Msa1108790 | AT5G20680.2 | 25.064 | 391 | 252 | 15 | 55 | 427 | 166 | 533 | 3.14e-31 | 125 |
| Msa1108790 | AT5G20680.4 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 3.22e-31 | 125 |
| Msa1108790 | AT5G20680.1 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 3.22e-31 | 125 |
| Msa1108790 | AT5G20680.3 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 3.22e-31 | 125 |
| Msa1108790 | AT5G20680.5 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 3.22e-31 | 125 |
| Msa1108790 | AT5G15900.1 | 27.596 | 366 | 222 | 15 | 84 | 427 | 65 | 409 | 6.54e-30 | 120 |
| Msa1108790 | AT5G15900.2 | 27.322 | 366 | 223 | 14 | 84 | 427 | 84 | 428 | 7.30e-30 | 120 |
| Msa1108790 | AT4G11090.1 | 25.333 | 375 | 231 | 14 | 80 | 427 | 73 | 425 | 2.48e-29 | 119 |
| Msa1108790 | AT3G28150.1 | 23.502 | 434 | 257 | 15 | 17 | 427 | 29 | 410 | 7.50e-27 | 111 |
| Msa1108790 | AT5G64470.4 | 27.509 | 269 | 177 | 11 | 86 | 343 | 55 | 316 | 5.68e-20 | 90.5 |
| Msa1108790 | AT5G64470.1 | 26.449 | 276 | 186 | 10 | 86 | 350 | 55 | 324 | 1.37e-19 | 89.7 |
Find 89 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAGACTTGGGCTAAT+TGG | 0.164498 | 7_3:+52074513 | Msa1108790:CDS |
| GAAAATTGTCTTTCTATATA+TGG | 0.208909 | 7_3:-52073391 | None:intergenic |
| GCAACATTGCCAATGGAAAA+TGG | 0.220734 | 7_3:+52073323 | Msa1108790:CDS |
| AATATTTGATTCCATGTATC+TGG | 0.237560 | 7_3:-52075483 | None:intergenic |
| CTTGGCAAGGTGCAATCTTC+TGG | 0.242629 | 7_3:-52073466 | None:intergenic |
| ACAAGGTTTGAACTTGAAAA+TGG | 0.243164 | 7_3:-52072867 | None:intergenic |
| TCTTCAGTGTATACTGAAAA+TGG | 0.259741 | 7_3:+52075384 | Msa1108790:CDS |
| TTTAGTCTGGTGTTCTTTCT+AGG | 0.269729 | 7_3:-52072890 | None:intergenic |
| ACAAGTTATGTCAGTGTAGA+TGG | 0.304836 | 7_3:-52073368 | None:intergenic |
| ATTTCAGAATATAGAATTGA+TGG | 0.347402 | 7_3:+52075357 | Msa1108790:CDS |
| GCAAAATACTTGCAAAATCA+AGG | 0.350927 | 7_3:+52075662 | Msa1108790:three_prime_UTR |
| AACACTGACATACATTTCAT+TGG | 0.355620 | 7_3:+52073982 | Msa1108790:CDS |
| CCTTTCCTCATGATCCCTTC+AGG | 0.359239 | 7_3:+52072728 | Msa1108790:exon |
| TTTGAAGACTTGGGCTAATT+GGG | 0.366796 | 7_3:+52074514 | Msa1108790:CDS |
| CATTTACCAGAAGTCAAGAT+TGG | 0.370501 | 7_3:+52075181 | Msa1108790:intron |
| AGTTAAAGCATAGTATGTTT+TGG | 0.385561 | 7_3:-52072573 | None:intergenic |
| AGATGAAATGAAAAGATCTA+TGG | 0.391811 | 7_3:+52072434 | Msa1108790:five_prime_UTR |
| TGTAGATGGGCTTTATTGAT+TGG | 0.392973 | 7_3:-52073354 | None:intergenic |
| GGGAAAAGACTACTATTTGT+AGG | 0.402810 | 7_3:+52073644 | Msa1108790:CDS |
| ATGCTAGTATAGAATTCTAC+TGG | 0.404319 | 7_3:+52073938 | Msa1108790:CDS |
| ACAAGTTAGCTTTGAAGACT+TGG | 0.409219 | 7_3:+52074504 | Msa1108790:CDS |
| CAAATAGAGATGATAATGAT+AGG | 0.414378 | 7_3:-52072785 | None:intergenic |
| ATTTACCAGAAGTCAAGATT+GGG | 0.419364 | 7_3:+52075182 | Msa1108790:intron |
| CAACATTGCCAATGGAAAAT+GGG | 0.423964 | 7_3:+52073324 | Msa1108790:CDS |
| TATGGTGGATGAGTGGTTCT+AGG | 0.424096 | 7_3:+52074097 | Msa1108790:CDS |
| TTCACTTCAAAGAAATCAAT+GGG | 0.450238 | 7_3:+52073670 | Msa1108790:CDS |
| TGCATACATTGGTGTTTGCC+TGG | 0.450244 | 7_3:+52075456 | Msa1108790:CDS |
| GTCTTCATCATTCTGTTACA+TGG | 0.452348 | 7_3:+52072653 | Msa1108790:five_prime_UTR |
| AATGAATTAGAATGAATTAG+TGG | 0.454247 | 7_3:-52072679 | None:intergenic |
| CTGGTGTTCTTTCTAGGACA+AGG | 0.456429 | 7_3:-52072884 | None:intergenic |
| TCATTTAGCAATGGATTTGA+AGG | 0.461734 | 7_3:+52074452 | Msa1108790:CDS |
| ATTCACTTCAAAGAAATCAA+TGG | 0.464902 | 7_3:+52073669 | Msa1108790:CDS |
| AGATTCTGATTATCAACATT+GGG | 0.465574 | 7_3:+52073435 | Msa1108790:CDS |
| GAAGCATTGGGGAACTGGTT+CGG | 0.469422 | 7_3:+52075257 | Msa1108790:CDS |
| AAAGAAAAGGATAATAAAAG+TGG | 0.472940 | 7_3:+52074011 | Msa1108790:CDS |
| ATTCTACTGGGCCCCATACC+TGG | 0.476362 | 7_3:+52073951 | Msa1108790:CDS |
| GTGTTAGACTCAACCAGGTA+TGG | 0.478801 | 7_3:-52073964 | None:intergenic |
| GGAAAAGACTACTATTTGTA+GGG | 0.479501 | 7_3:+52073645 | Msa1108790:CDS |
| AGGGTAAGAATGAGTTGAAA+GGG | 0.481191 | 7_3:-52072517 | None:intergenic |
| GAGATGATAATGATAGGAAA+AGG | 0.487294 | 7_3:-52072779 | None:intergenic |
| AATCAGAAATCTATGAAAAG+AGG | 0.494302 | 7_3:+52073731 | Msa1108790:CDS |
| AAAGCTAACTTGTATGCTAC+TGG | 0.494526 | 7_3:-52074494 | None:intergenic |
| TGTTAGACTCAACCAGGTAT+GGG | 0.502247 | 7_3:-52073963 | None:intergenic |
| ATCAGAAATCTATGAAAAGA+GGG | 0.504271 | 7_3:+52073732 | Msa1108790:CDS |
| CTATCAATCCAAACAAAACA+AGG | 0.508070 | 7_3:+52074546 | Msa1108790:CDS |
| CAGATTCTGATTATCAACAT+TGG | 0.508716 | 7_3:+52073434 | Msa1108790:CDS |
| TGCCTGGTGTTCCAGATACA+TGG | 0.510835 | 7_3:+52075472 | Msa1108790:CDS |
| GAGGGTAAGAATGAGTTGAA+AGG | 0.515198 | 7_3:-52072518 | None:intergenic |
| CAAGTTAGCTTTGAAGACTT+GGG | 0.522945 | 7_3:+52074505 | Msa1108790:CDS |
| CTGATTATCAACATTGGGAG+TGG | 0.529866 | 7_3:+52073440 | Msa1108790:CDS |
| TTTGTGAGCCATACCTTGCT+TGG | 0.533318 | 7_3:+52072341 | Msa1108790:five_prime_UTR |
| TTAATATACATCACCAAGCA+AGG | 0.536471 | 7_3:-52072354 | None:intergenic |
| ATGCAACATGGATTGATGAC+AGG | 0.540613 | 7_3:+52073278 | Msa1108790:CDS |
| CAAAATACTTGCAAAATCAA+GGG | 0.544720 | 7_3:+52075663 | Msa1108790:three_prime_UTR |
| CAAGTTATGTCAGTGTAGAT+GGG | 0.554652 | 7_3:-52073367 | None:intergenic |
| AGGTGATAAGAAAGTTGATG+AGG | 0.554872 | 7_3:+52073246 | Msa1108790:intron |
| CATTTAGCAATGGATTTGAA+GGG | 0.555614 | 7_3:+52074453 | Msa1108790:CDS |
| GTTACATTGATGAATGTCAC+TGG | 0.556231 | 7_3:-52075330 | None:intergenic |
| TCATTGGAGATACAAAGAAA+AGG | 0.557285 | 7_3:+52073998 | Msa1108790:CDS |
| ATACATCACCAAGCAAGGTA+TGG | 0.561071 | 7_3:-52072349 | None:intergenic |
| CATGTAGAATATTTATCATG+TGG | 0.564503 | 7_3:-52072488 | None:intergenic |
| TCATTCAGTCTTCAAAGTCA+AGG | 0.570752 | 7_3:+52073760 | Msa1108790:CDS |
| AATTGTTAAGTGAAGAAGAG+AGG | 0.575802 | 7_3:+52075412 | Msa1108790:CDS |
| AGATGGGGTTCATTTAGCAA+TGG | 0.578823 | 7_3:+52074443 | Msa1108790:intron |
| GAAGAATGCAACATTGCCAA+TGG | 0.580954 | 7_3:+52073316 | Msa1108790:CDS |
| TTCCATGTATCTGGAACACC+AGG | 0.581846 | 7_3:-52075474 | None:intergenic |
| ATGTAGAATATTTATCATGT+GGG | 0.583411 | 7_3:-52072487 | None:intergenic |
| GGAATAATGAAAATCCATAG+AGG | 0.592887 | 7_3:+52072749 | Msa1108790:CDS |
| TTTACCAGAAGTCAAGATTG+GGG | 0.598053 | 7_3:+52075183 | Msa1108790:intron |
| CAGAAGATTGCACCTTGCCA+AGG | 0.600519 | 7_3:+52073467 | Msa1108790:CDS |
| GAAAAGACTACTATTTGTAG+GGG | 0.609179 | 7_3:+52073646 | Msa1108790:CDS |
| CAGTGTATACTGAAAATGGA+GGG | 0.619439 | 7_3:+52075388 | Msa1108790:CDS |
| CCTGAAGGGATCATGAGGAA+AGG | 0.623789 | 7_3:-52072728 | None:intergenic |
| AAAATGCAGATTGCATACAT+TGG | 0.635099 | 7_3:+52075445 | Msa1108790:CDS |
| GTTAGACTCAACCAGGTATG+GGG | 0.635629 | 7_3:-52073962 | None:intergenic |
| ACCACTCATCCACCATACAT+AGG | 0.637859 | 7_3:-52074091 | None:intergenic |
| CAATGTCACCTACACACACA+AGG | 0.637869 | 7_3:+52074582 | Msa1108790:CDS |
| TGTCAGTGTTAGACTCAACC+AGG | 0.641142 | 7_3:-52073969 | None:intergenic |
| GAGAAAGACCTTGTGTGTGT+AGG | 0.641401 | 7_3:-52074590 | None:intergenic |
| TGCTAGTATAGAATTCTACT+GGG | 0.645271 | 7_3:+52073939 | Msa1108790:CDS |
| TTATTCCTGAAGGGATCATG+AGG | 0.647125 | 7_3:-52072733 | None:intergenic |
| GTGTGGAACTTACCTTGGCA+AGG | 0.655568 | 7_3:-52073479 | None:intergenic |
| AGGAGATTGTAAATGCAACA+TGG | 0.660136 | 7_3:+52073266 | Msa1108790:CDS |
| ACCTATGTATGGTGGATGAG+TGG | 0.661766 | 7_3:+52074090 | Msa1108790:CDS |
| TATCAATCCAAACAAAACAA+GGG | 0.665595 | 7_3:+52074547 | Msa1108790:CDS |
| GGATAAACGTATAATGAGTG+TGG | 0.666583 | 7_3:+52075278 | Msa1108790:CDS |
| TCAGTGTATACTGAAAATGG+AGG | 0.667022 | 7_3:+52075387 | Msa1108790:CDS |
| TCAATGAGACAAAGCCAGTG+AGG | 0.681040 | 7_3:+52075229 | Msa1108790:CDS |
| TCAGAAATCTATGAAAAGAG+GGG | 0.685360 | 7_3:+52073733 | Msa1108790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAGTGTATATTATA+AGG | - | chr7_3:52074655-52074674 | None:intergenic | 10.0% |
| !! | ATCATTGCATAAAAAATTTA+GGG | - | chr7_3:52073198-52073217 | None:intergenic | 15.0% |
| !!! | CAATTTTCTTGTATAAAAAA+TGG | + | chr7_3:52073406-52073425 | Msa1108790:CDS | 15.0% |
| !!! | ATAATGTCAAAAAGTAATTT+TGG | - | chr7_3:52073527-52073546 | None:intergenic | 15.0% |
| !! | CAATAAAAGTTATTACTTTA+AGG | + | chr7_3:52073851-52073870 | Msa1108790:intron | 15.0% |
| !! | TTAATGATTTAATTCGAATA+GGG | - | chr7_3:52074149-52074168 | None:intergenic | 15.0% |
| !! | TTTAATGATTTAATTCGAAT+AGG | - | chr7_3:52074150-52074169 | None:intergenic | 15.0% |
| !! | ATGTAGAATATTTATCATGT+GGG | - | chr7_3:52072490-52072509 | None:intergenic | 20.0% |
| !! | AATGAATTAGAATGAATTAG+TGG | - | chr7_3:52072682-52072701 | None:intergenic | 20.0% |
| !! | CATCATTGCATAAAAAATTT+AGG | - | chr7_3:52073199-52073218 | None:intergenic | 20.0% |
| !! | GAAAATTGTCTTTCTATATA+TGG | - | chr7_3:52073394-52073413 | None:intergenic | 20.0% |
| !! | ATAGTACTAATATAGATACT+TGG | + | chr7_3:52073892-52073911 | Msa1108790:intron | 20.0% |
| !! | AAAGAAAAGGATAATAAAAG+TGG | + | chr7_3:52074011-52074030 | Msa1108790:CDS | 20.0% |
| !!! | AATGTCATGATTTTAAATTG+CGG | + | chr7_3:52074191-52074210 | Msa1108790:intron | 20.0% |
| !!! | TTTTTATACTCTTAAACCAA+AGG | + | chr7_3:52074383-52074402 | Msa1108790:intron | 20.0% |
| !!! | TTTTATACTCTTAAACCAAA+GGG | + | chr7_3:52074384-52074403 | Msa1108790:intron | 20.0% |
| !!! | TCTAGTTTATGAATTTTAGA+TGG | + | chr7_3:52074426-52074445 | Msa1108790:intron | 20.0% |
| !!! | CTAGTTTATGAATTTTAGAT+GGG | + | chr7_3:52074427-52074446 | Msa1108790:intron | 20.0% |
| !!! | TAGTTTATGAATTTTAGATG+GGG | + | chr7_3:52074428-52074447 | Msa1108790:intron | 20.0% |
| !! | ATATTATAATGCAACAAAGA+AGG | - | chr7_3:52074954-52074973 | None:intergenic | 20.0% |
| !! | AGAAAATAACATAATTCAGT+CGG | - | chr7_3:52075020-52075039 | None:intergenic | 20.0% |
| !! | ATTTCAGAATATAGAATTGA+TGG | + | chr7_3:52075357-52075376 | Msa1108790:CDS | 20.0% |
| !!! | TACATGGAATCAAATATTTT+TGG | + | chr7_3:52075488-52075507 | Msa1108790:CDS | 20.0% |
| ! | AGATGAAATGAAAAGATCTA+TGG | + | chr7_3:52072434-52072453 | Msa1108790:five_prime_UTR | 25.0% |
| ! | CATGTAGAATATTTATCATG+TGG | - | chr7_3:52072491-52072510 | None:intergenic | 25.0% |
| ! | ATGTCAAAAAAGATACTAGA+GGG | - | chr7_3:52072539-52072558 | None:intergenic | 25.0% |
| ! | AATGTCAAAAAAGATACTAG+AGG | - | chr7_3:52072540-52072559 | None:intergenic | 25.0% |
| !! | AGTTAAAGCATAGTATGTTT+TGG | - | chr7_3:52072576-52072595 | None:intergenic | 25.0% |
| !! | CAAATAGAGATGATAATGAT+AGG | - | chr7_3:52072788-52072807 | None:intergenic | 25.0% |
| ! | ATCTCTGAATTATTGAATGT+TGG | + | chr7_3:52073143-52073162 | Msa1108790:intron | 25.0% |
| ! | AGATTCTGATTATCAACATT+GGG | + | chr7_3:52073435-52073454 | Msa1108790:CDS | 25.0% |
| ! | ATTCACTTCAAAGAAATCAA+TGG | + | chr7_3:52073669-52073688 | Msa1108790:CDS | 25.0% |
| ! | TTCACTTCAAAGAAATCAAT+GGG | + | chr7_3:52073670-52073689 | Msa1108790:CDS | 25.0% |
| !! | TTCATAGATTTCTGATTTTG+AGG | - | chr7_3:52073728-52073747 | None:intergenic | 25.0% |
| ! | AATCAGAAATCTATGAAAAG+AGG | + | chr7_3:52073731-52073750 | Msa1108790:CDS | 25.0% |
| ! | ATCAGAAATCTATGAAAAGA+GGG | + | chr7_3:52073732-52073751 | Msa1108790:CDS | 25.0% |
| ! | TCAAAGAAAGAGCAAAAAAT+TGG | + | chr7_3:52074040-52074059 | Msa1108790:CDS | 25.0% |
| !! | TTGTTTTCAATACCTATGTA+TGG | + | chr7_3:52074079-52074098 | Msa1108790:CDS | 25.0% |
| !!! | TTCATCATGGTTTTAAATTG+CGG | - | chr7_3:52074337-52074356 | None:intergenic | 25.0% |
| ! | TATCAATCCAAACAAAACAA+GGG | + | chr7_3:52074547-52074566 | Msa1108790:CDS | 25.0% |
| !!! | TCTCTTCTAAAGTATTTTCT+TGG | + | chr7_3:52074611-52074630 | Msa1108790:intron | 25.0% |
| !! | AGTTTTTCTTCTAACAATGT+TGG | + | chr7_3:52074855-52074874 | Msa1108790:intron | 25.0% |
| ! | GCATTATAATATATGAAGCA+CGG | + | chr7_3:52074962-52074981 | Msa1108790:intron | 25.0% |
| ! | AATATTTGATTCCATGTATC+TGG | - | chr7_3:52075486-52075505 | None:intergenic | 25.0% |
| ! | CAAAATACTTGCAAAATCAA+GGG | + | chr7_3:52075663-52075682 | Msa1108790:three_prime_UTR | 25.0% |
| TTAATATACATCACCAAGCA+AGG | - | chr7_3:52072357-52072376 | None:intergenic | 30.0% | |
| !!! | GGTTTTATGCATTTTTGAGT+AGG | - | chr7_3:52072604-52072623 | None:intergenic | 30.0% |
| AAAAAAGGTTTAGAGAGGTA+AGG | - | chr7_3:52072625-52072644 | None:intergenic | 30.0% | |
| TGAAGACATTGCACAAAAAA+AGG | - | chr7_3:52072640-52072659 | None:intergenic | 30.0% | |
| ! | GGATTTTCATTATTCCTGAA+GGG | - | chr7_3:52072745-52072764 | None:intergenic | 30.0% |
| ! | TGGATTTTCATTATTCCTGA+AGG | - | chr7_3:52072746-52072765 | None:intergenic | 30.0% |
| GGAATAATGAAAATCCATAG+AGG | + | chr7_3:52072749-52072768 | Msa1108790:CDS | 30.0% | |
| ! | GAGATGATAATGATAGGAAA+AGG | - | chr7_3:52072782-52072801 | None:intergenic | 30.0% |
| ACAAGGTTTGAACTTGAAAA+TGG | - | chr7_3:52072870-52072889 | None:intergenic | 30.0% | |
| !! | AGACTTACTTGATTTTAGTC+TGG | - | chr7_3:52072906-52072925 | None:intergenic | 30.0% |
| ! | TTTTTACGATCCGTATCAAA+TGG | + | chr7_3:52073171-52073190 | Msa1108790:intron | 30.0% |
| ! | AATTTAGGGTCCATTTGATA+CGG | - | chr7_3:52073184-52073203 | None:intergenic | 30.0% |
| ! | GTTAAAAACCCATTTTCCAT+TGG | - | chr7_3:52073335-52073354 | None:intergenic | 30.0% |
| CAGATTCTGATTATCAACAT+TGG | + | chr7_3:52073434-52073453 | Msa1108790:CDS | 30.0% | |
| GGAATCACAATTAACATGTT+TGG | - | chr7_3:52073506-52073525 | None:intergenic | 30.0% | |
| GGAAAAGACTACTATTTGTA+GGG | + | chr7_3:52073645-52073664 | Msa1108790:CDS | 30.0% | |
| GAAAAGACTACTATTTGTAG+GGG | + | chr7_3:52073646-52073665 | Msa1108790:CDS | 30.0% | |
| ! | ATGGGAATCTTTTGTATGTT+TGG | + | chr7_3:52073688-52073707 | Msa1108790:CDS | 30.0% |
| ! | CTTTTGTATGTTTGGTAGAA+TGG | + | chr7_3:52073696-52073715 | Msa1108790:CDS | 30.0% |
| TCAGAAATCTATGAAAAGAG+GGG | + | chr7_3:52073733-52073752 | Msa1108790:CDS | 30.0% | |
| TTTAGCCATTTATCCAAACA+AGG | + | chr7_3:52073816-52073835 | Msa1108790:intron | 30.0% | |
| !! | TTAAGCCTTGTTTGGATAAA+TGG | - | chr7_3:52073824-52073843 | None:intergenic | 30.0% |
| !! | GAATTTGTTTAAGCCTTGTT+TGG | - | chr7_3:52073832-52073851 | None:intergenic | 30.0% |
| ATGCTAGTATAGAATTCTAC+TGG | + | chr7_3:52073938-52073957 | Msa1108790:CDS | 30.0% | |
| TGCTAGTATAGAATTCTACT+GGG | + | chr7_3:52073939-52073958 | Msa1108790:CDS | 30.0% | |
| AACACTGACATACATTTCAT+TGG | + | chr7_3:52073982-52074001 | Msa1108790:CDS | 30.0% | |
| TCATTGGAGATACAAAGAAA+AGG | + | chr7_3:52073998-52074017 | Msa1108790:CDS | 30.0% | |
| ! | TTTTCAATACCTATGTATGG+TGG | + | chr7_3:52074082-52074101 | Msa1108790:CDS | 30.0% |
| CATATTTCACCGCAATATAA+TGG | - | chr7_3:52074241-52074260 | None:intergenic | 30.0% | |
| TCATTGTTGAATGTTCATCA+TGG | - | chr7_3:52074350-52074369 | None:intergenic | 30.0% | |
| TTAAACCAAAGGGATGAAAA+TGG | + | chr7_3:52074394-52074413 | Msa1108790:intron | 30.0% | |
| ! | AAATACCATTTTCATCCCTT+TGG | - | chr7_3:52074402-52074421 | None:intergenic | 30.0% |
| ! | TCATTTAGCAATGGATTTGA+AGG | + | chr7_3:52074452-52074471 | Msa1108790:CDS | 30.0% |
| ! | CATTTAGCAATGGATTTGAA+GGG | + | chr7_3:52074453-52074472 | Msa1108790:CDS | 30.0% |
| CTATCAATCCAAACAAAACA+AGG | + | chr7_3:52074546-52074565 | Msa1108790:CDS | 30.0% | |
| GTGAGTATTATAAATCTCAG+AGG | - | chr7_3:52074787-52074806 | None:intergenic | 30.0% | |
| ! | CTTGTAAGCAATTTTCTACA+TGG | - | chr7_3:52074882-52074901 | None:intergenic | 30.0% |
| CATGTAGAAAATTGCTTACA+AGG | + | chr7_3:52074880-52074899 | Msa1108790:intron | 30.0% | |
| ATTTACCAGAAGTCAAGATT+GGG | + | chr7_3:52075182-52075201 | Msa1108790:intron | 30.0% | |
| TCTTCAGTGTATACTGAAAA+TGG | + | chr7_3:52075384-52075403 | Msa1108790:CDS | 30.0% | |
| AATTGTTAAGTGAAGAAGAG+AGG | + | chr7_3:52075412-52075431 | Msa1108790:CDS | 30.0% | |
| AAAATGCAGATTGCATACAT+TGG | + | chr7_3:52075445-52075464 | Msa1108790:CDS | 30.0% | |
| GCAAAATACTTGCAAAATCA+AGG | + | chr7_3:52075662-52075681 | Msa1108790:three_prime_UTR | 30.0% | |
| ! | AGGGTAAGAATGAGTTGAAA+GGG | - | chr7_3:52072520-52072539 | None:intergenic | 35.0% |
| GCACAAAAAAAGGTTTAGAG+AGG | - | chr7_3:52072630-52072649 | None:intergenic | 35.0% | |
| GTCTTCATCATTCTGTTACA+TGG | + | chr7_3:52072653-52072672 | Msa1108790:five_prime_UTR | 35.0% | |
| !!! | GAAAAGGCATTTTTCCTCTA+TGG | - | chr7_3:52072766-52072785 | None:intergenic | 35.0% |
| TTTAGTCTGGTGTTCTTTCT+AGG | - | chr7_3:52072893-52072912 | None:intergenic | 35.0% | |
| CGAAAATGAGGATATAGTTG+TGG | - | chr7_3:52072942-52072961 | None:intergenic | 35.0% | |
| ! | AAGTTCTCGTTCGTTTGTTA+CGG | + | chr7_3:52073021-52073040 | Msa1108790:intron | 35.0% |
| !! | AGGTGATAAGAAAGTTGATG+AGG | + | chr7_3:52073246-52073265 | Msa1108790:intron | 35.0% |
| AGGAGATTGTAAATGCAACA+TGG | + | chr7_3:52073266-52073285 | Msa1108790:CDS | 35.0% | |
| CAACATTGCCAATGGAAAAT+GGG | + | chr7_3:52073324-52073343 | Msa1108790:CDS | 35.0% | |
| !! | TGTAGATGGGCTTTATTGAT+TGG | - | chr7_3:52073357-52073376 | None:intergenic | 35.0% |
| CAAGTTATGTCAGTGTAGAT+GGG | - | chr7_3:52073370-52073389 | None:intergenic | 35.0% | |
| ACAAGTTATGTCAGTGTAGA+TGG | - | chr7_3:52073371-52073390 | None:intergenic | 35.0% | |
| ! | CAATTAACATGTTTGGAGTG+TGG | - | chr7_3:52073499-52073518 | None:intergenic | 35.0% |
| TCAGCACTCAAAAAACTTCA+AGG | + | chr7_3:52073623-52073642 | Msa1108790:CDS | 35.0% | |
| CAGCACTCAAAAAACTTCAA+GGG | + | chr7_3:52073624-52073643 | Msa1108790:CDS | 35.0% | |
| GGGAAAAGACTACTATTTGT+AGG | + | chr7_3:52073644-52073663 | Msa1108790:CDS | 35.0% | |
| TCATTCAGTCTTCAAAGTCA+AGG | + | chr7_3:52073760-52073779 | Msa1108790:CDS | 35.0% | |
| GAAAGAGCAAAAAATTGGAC+AGG | + | chr7_3:52074045-52074064 | Msa1108790:CDS | 35.0% | |
| TTAAATTGCGGTTGTAGTTG+CGG | + | chr7_3:52074203-52074222 | Msa1108790:intron | 35.0% | |
| TTTCACCGCAATATAATGGT+TGG | - | chr7_3:52074237-52074256 | None:intergenic | 35.0% | |
| AGTCAATGTAGCCACAATTA+CGG | + | chr7_3:52074270-52074289 | Msa1108790:intron | 35.0% | |
| CAATTGCAGCCACAATATAA+CGG | - | chr7_3:52074304-52074323 | None:intergenic | 35.0% | |
| ! | AAAGCTAACTTGTATGCTAC+TGG | - | chr7_3:52074497-52074516 | None:intergenic | 35.0% |
| !! | ACAAGTTAGCTTTGAAGACT+TGG | + | chr7_3:52074504-52074523 | Msa1108790:CDS | 35.0% |
| !! | CAAGTTAGCTTTGAAGACTT+GGG | + | chr7_3:52074505-52074524 | Msa1108790:CDS | 35.0% |
| TTTGAAGACTTGGGCTAATT+GGG | + | chr7_3:52074514-52074533 | Msa1108790:CDS | 35.0% | |
| !!! | AAGAAGACCCTTGTTTTGTT+TGG | - | chr7_3:52074557-52074576 | None:intergenic | 35.0% |
| AAGCAGACTAAATATTGCAG+TGG | - | chr7_3:52074735-52074754 | None:intergenic | 35.0% | |
| TGATGAGTAGGAATTGTACT+CGG | + | chr7_3:52074759-52074778 | Msa1108790:intron | 35.0% | |
| TTAAGTCTAATGCAGGTGAT+TGG | - | chr7_3:52074822-52074841 | None:intergenic | 35.0% | |
| ATCACCTGCATTAGACTTAA+TGG | + | chr7_3:52074822-52074841 | Msa1108790:intron | 35.0% | |
| ATAGTGCTCAACAAATCTCT+AGG | - | chr7_3:52075124-52075143 | None:intergenic | 35.0% | |
| CATTTACCAGAAGTCAAGAT+TGG | + | chr7_3:52075181-52075200 | Msa1108790:intron | 35.0% | |
| TTTACCAGAAGTCAAGATTG+GGG | + | chr7_3:52075183-52075202 | Msa1108790:intron | 35.0% | |
| !! | AGTGAGGAAAAAGAAGCATT+GGG | + | chr7_3:52075245-52075264 | Msa1108790:CDS | 35.0% |
| GGATAAACGTATAATGAGTG+TGG | + | chr7_3:52075278-52075297 | Msa1108790:CDS | 35.0% | |
| GTTACATTGATGAATGTCAC+TGG | - | chr7_3:52075333-52075352 | None:intergenic | 35.0% | |
| TCAGTGTATACTGAAAATGG+AGG | + | chr7_3:52075387-52075406 | Msa1108790:CDS | 35.0% | |
| CAGTGTATACTGAAAATGGA+GGG | + | chr7_3:52075388-52075407 | Msa1108790:CDS | 35.0% | |
| ! | TGTATGCAATCTGCATTTTG+TGG | - | chr7_3:52075444-52075463 | None:intergenic | 35.0% |
| ATACATCACCAAGCAAGGTA+TGG | - | chr7_3:52072352-52072371 | None:intergenic | 40.0% | |
| ! | GAGGGTAAGAATGAGTTGAA+AGG | - | chr7_3:52072521-52072540 | None:intergenic | 40.0% |
| TTATTCCTGAAGGGATCATG+AGG | - | chr7_3:52072736-52072755 | None:intergenic | 40.0% | |
| TCAAGTAGCATGCGAAAATG+AGG | - | chr7_3:52072954-52072973 | None:intergenic | 40.0% | |
| ! | AGTTCTCGTTCGTTTGTTAC+GGG | + | chr7_3:52073022-52073041 | Msa1108790:intron | 40.0% |
| ACCTGCTTCGAATGAAAAGT+TGG | + | chr7_3:52073081-52073100 | Msa1108790:intron | 40.0% | |
| ! | ACCAACTTTTCATTCGAAGC+AGG | - | chr7_3:52073085-52073104 | None:intergenic | 40.0% |
| TGTATTGTGATTGTCCTAGC+AGG | + | chr7_3:52073226-52073245 | Msa1108790:intron | 40.0% | |
| CAACTTTCTTATCACCTGCT+AGG | - | chr7_3:52073243-52073262 | None:intergenic | 40.0% | |
| ! | ATGCAACATGGATTGATGAC+AGG | + | chr7_3:52073278-52073297 | Msa1108790:CDS | 40.0% |
| GAAGAATGCAACATTGCCAA+TGG | + | chr7_3:52073316-52073335 | Msa1108790:CDS | 40.0% | |
| GCAACATTGCCAATGGAAAA+TGG | + | chr7_3:52073323-52073342 | Msa1108790:CDS | 40.0% | |
| CTGATTATCAACATTGGGAG+TGG | + | chr7_3:52073440-52073459 | Msa1108790:CDS | 40.0% | |
| !!! | AGTTTTTTGAGTGCTGACAC+TGG | - | chr7_3:52073620-52073639 | None:intergenic | 40.0% |
| ACTTGGATGTGTTGTAACAC+AGG | + | chr7_3:52073909-52073928 | Msa1108790:intron | 40.0% | |
| TGTTAGACTCAACCAGGTAT+GGG | - | chr7_3:52073966-52073985 | None:intergenic | 40.0% | |
| AGATGGGGTTCATTTAGCAA+TGG | + | chr7_3:52074443-52074462 | Msa1108790:intron | 40.0% | |
| ! | CTTTGAAGACTTGGGCTAAT+TGG | + | chr7_3:52074513-52074532 | Msa1108790:CDS | 40.0% |
| !!! | GTCTGCTTTTTGTGATGAGT+AGG | + | chr7_3:52074747-52074766 | Msa1108790:intron | 40.0% |
| GCTTCCATTAAGTCTAATGC+AGG | - | chr7_3:52074829-52074848 | None:intergenic | 40.0% | |
| ATGATGCACAGATACAGACA+CGG | - | chr7_3:52075092-52075111 | None:intergenic | 40.0% | |
| ! | CAATGCTTCTTTTTCCTCAC+TGG | - | chr7_3:52075246-52075265 | None:intergenic | 40.0% |
| ! | CAGTGAGGAAAAAGAAGCAT+TGG | + | chr7_3:52075244-52075263 | Msa1108790:CDS | 40.0% |
| !! | GTGAGGAAAAAGAAGCATTG+GGG | + | chr7_3:52075246-52075265 | Msa1108790:CDS | 40.0% |
| !! | AAAAAGAAGCATTGGGGAAC+TGG | + | chr7_3:52075252-52075271 | Msa1108790:CDS | 40.0% |
| TTTGTGAGCCATACCTTGCT+TGG | + | chr7_3:52072341-52072360 | Msa1108790:five_prime_UTR | 45.0% | |
| !! | CTGGTGTTCTTTCTAGGACA+AGG | - | chr7_3:52072887-52072906 | None:intergenic | 45.0% |
| ! | CGCATGCTACTTGACTCTAA+AGG | + | chr7_3:52072960-52072979 | Msa1108790:intron | 45.0% |
| TTGGAGTGTGGAACTTACCT+TGG | - | chr7_3:52073487-52073506 | None:intergenic | 45.0% | |
| GTTAGACTCAACCAGGTATG+GGG | - | chr7_3:52073965-52073984 | None:intergenic | 45.0% | |
| GTGTTAGACTCAACCAGGTA+TGG | - | chr7_3:52073967-52073986 | None:intergenic | 45.0% | |
| TGTCAGTGTTAGACTCAACC+AGG | - | chr7_3:52073972-52073991 | None:intergenic | 45.0% | |
| AGCAAAAAATTGGACAGGCG+TGG | + | chr7_3:52074050-52074069 | Msa1108790:CDS | 45.0% | |
| !! | ACCTATGTATGGTGGATGAG+TGG | + | chr7_3:52074090-52074109 | Msa1108790:CDS | 45.0% |
| ACCACTCATCCACCATACAT+AGG | - | chr7_3:52074094-52074113 | None:intergenic | 45.0% | |
| !! | TATGGTGGATGAGTGGTTCT+AGG | + | chr7_3:52074097-52074116 | Msa1108790:CDS | 45.0% |
| CGCTGCCAACCATTATATTG+CGG | + | chr7_3:52074229-52074248 | Msa1108790:intron | 45.0% | |
| TAGCCACAATTACGGTTGTG+AGG | + | chr7_3:52074278-52074297 | Msa1108790:intron | 45.0% | |
| GTTGTGAGGCCGTTATATTG+TGG | + | chr7_3:52074292-52074311 | Msa1108790:intron | 45.0% | |
| CAATGTCACCTACACACACA+AGG | + | chr7_3:52074582-52074601 | Msa1108790:CDS | 45.0% | |
| GAGAAAGACCTTGTGTGTGT+AGG | - | chr7_3:52074593-52074612 | None:intergenic | 45.0% | |
| GTTTCCCCAATCTTGACTTC+TGG | - | chr7_3:52075190-52075209 | None:intergenic | 45.0% | |
| TCAATGAGACAAAGCCAGTG+AGG | + | chr7_3:52075229-52075248 | Msa1108790:CDS | 45.0% | |
| ! | TGCATACATTGGTGTTTGCC+TGG | + | chr7_3:52075456-52075475 | Msa1108790:CDS | 45.0% |
| ! | TTCCATGTATCTGGAACACC+AGG | - | chr7_3:52075477-52075496 | None:intergenic | 45.0% |
| CCTGAAGGGATCATGAGGAA+AGG | - | chr7_3:52072731-52072750 | None:intergenic | 50.0% | |
| CCTTTCCTCATGATCCCTTC+AGG | + | chr7_3:52072728-52072747 | Msa1108790:exon | 50.0% | |
| CTTGGCAAGGTGCAATCTTC+TGG | - | chr7_3:52073469-52073488 | None:intergenic | 50.0% | |
| CAGAAGATTGCACCTTGCCA+AGG | + | chr7_3:52073467-52073486 | Msa1108790:CDS | 50.0% | |
| GTGTGGAACTTACCTTGGCA+AGG | - | chr7_3:52073482-52073501 | None:intergenic | 50.0% | |
| TGTGGCTGCAATTGCGATTG+TGG | + | chr7_3:52074310-52074329 | Msa1108790:intron | 50.0% | |
| !! | GAAGCATTGGGGAACTGGTT+CGG | + | chr7_3:52075257-52075276 | Msa1108790:CDS | 50.0% |
| TGCCTGGTGTTCCAGATACA+TGG | + | chr7_3:52075472-52075491 | Msa1108790:CDS | 50.0% | |
| ATTCTACTGGGCCCCATACC+TGG | + | chr7_3:52073951-52073970 | Msa1108790:CDS | 55.0% | |
| CGGCCTCACAACCGTAATTG+TGG | - | chr7_3:52074284-52074303 | None:intergenic | 55.0% | |
| GTCAGTGTCCGTGTCATGTC+TGG | + | chr7_3:52075063-52075082 | Msa1108790:intron | 55.0% | |
| CACGGACACCAGACATGACA+CGG | - | chr7_3:52075074-52075093 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52072320 | 52075746 | 52072320 | ID=Msa1108790;Name=Msa1108790 |
| chr7_3 | mRNA | 52072320 | 52075746 | 52072320 | ID=Msa1108790-mRNA-1;Parent=Msa1108790;Name=Msa1108790-mRNA-1;_AED=0.09;_eAED=0.09;_QI=417|1|1|1|1|1|6|225|427 |
| chr7_3 | exon | 52072320 | 52072917 | 52072320 | ID=Msa1108790-mRNA-1:exon:10771;Parent=Msa1108790-mRNA-1 |
| chr7_3 | exon | 52073248 | 52073488 | 52073248 | ID=Msa1108790-mRNA-1:exon:10772;Parent=Msa1108790-mRNA-1 |
| chr7_3 | exon | 52073610 | 52073781 | 52073610 | ID=Msa1108790-mRNA-1:exon:10773;Parent=Msa1108790-mRNA-1 |
| chr7_3 | exon | 52073931 | 52074130 | 52073931 | ID=Msa1108790-mRNA-1:exon:10774;Parent=Msa1108790-mRNA-1 |
| chr7_3 | exon | 52074445 | 52074603 | 52074445 | ID=Msa1108790-mRNA-1:exon:10775;Parent=Msa1108790-mRNA-1 |
| chr7_3 | exon | 52075191 | 52075746 | 52075191 | ID=Msa1108790-mRNA-1:exon:10776;Parent=Msa1108790-mRNA-1 |
| chr7_3 | five_prime_UTR | 52072320 | 52072736 | 52072320 | ID=Msa1108790-mRNA-1:five_prime_utr;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52072737 | 52072917 | 52072737 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52073248 | 52073488 | 52073248 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52073610 | 52073781 | 52073610 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52073931 | 52074130 | 52073931 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52074445 | 52074603 | 52074445 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | CDS | 52075191 | 52075521 | 52075191 | ID=Msa1108790-mRNA-1:cds;Parent=Msa1108790-mRNA-1 |
| chr7_3 | three_prime_UTR | 52075522 | 52075746 | 52075522 | ID=Msa1108790-mRNA-1:three_prime_utr;Parent=Msa1108790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
