Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1152510 | XP_013449167.2 | 97.892 | 427 | 9 | 0 | 1 | 427 | 1 | 427 | 0.0 | 870 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1152510 | sp|Q8LED3|TBL3_ARATH | 64.371 | 421 | 144 | 2 | 13 | 427 | 14 | 434 | 0.0 | 568 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1152510 | A0A396H185 | 97.892 | 427 | 9 | 0 | 1 | 427 | 1 | 427 | 0.0 | 870 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007990 | Msa1152510 | 0.803930 | 2.755151e-49 | -8.615850e-47 |
Msa0014570 | Msa1152510 | 0.807586 | 4.702539e-50 | -8.615850e-47 |
Msa0018240 | Msa1152510 | 0.820054 | 8.397822e-53 | -8.615850e-47 |
Msa0022550 | Msa1152510 | 0.834204 | 3.430319e-56 | -8.615850e-47 |
Msa0027390 | Msa1152510 | 0.805515 | 1.286433e-49 | -8.615850e-47 |
Msa0028170 | Msa1152510 | 0.803533 | 3.331113e-49 | -8.615850e-47 |
Msa0030280 | Msa1152510 | 0.803565 | 3.280605e-49 | -8.615850e-47 |
Msa0039250 | Msa1152510 | 0.820168 | 7.907805e-53 | -8.615850e-47 |
Msa0045490 | Msa1152510 | 0.810501 | 1.117259e-50 | -8.615850e-47 |
Msa0045790 | Msa1152510 | 0.812930 | 3.309305e-51 | -8.615850e-47 |
Msa0046160 | Msa1152510 | 0.810655 | 1.034728e-50 | -8.615850e-47 |
Msa0049790 | Msa1152510 | 0.810704 | 1.009876e-50 | -8.615850e-47 |
Msa0072900 | Msa1152510 | 0.808492 | 3.016363e-50 | -8.615850e-47 |
Msa0077450 | Msa1152510 | 0.806253 | 8.996991e-50 | -8.615850e-47 |
Msa0077880 | Msa1152510 | 0.817221 | 3.689908e-52 | -8.615850e-47 |
Msa0081520 | Msa1152510 | 0.808408 | 3.143718e-50 | -8.615850e-47 |
Msa0087470 | Msa1152510 | 0.819196 | 1.318684e-52 | -8.615850e-47 |
Msa0093400 | Msa1152510 | 0.807078 | 6.026080e-50 | -8.615850e-47 |
Msa0094850 | Msa1152510 | 0.818607 | 1.794526e-52 | -8.615850e-47 |
Msa0114110 | Msa1152510 | 0.811514 | 6.738410e-51 | -8.615850e-47 |
Msa0118570 | Msa1152510 | 0.813526 | 2.448637e-51 | -8.615850e-47 |
Msa0608200 | Msa1152510 | 0.808579 | 2.890306e-50 | -8.615850e-47 |
Msa0609430 | Msa1152510 | 0.803886 | 2.813832e-49 | -8.615850e-47 |
Msa0615420 | Msa1152510 | 0.802826 | 4.664947e-49 | -8.615850e-47 |
Msa0619470 | Msa1152510 | 0.824378 | 8.337040e-54 | -8.615850e-47 |
Msa0619510 | Msa1152510 | 0.808537 | 2.950048e-50 | -8.615850e-47 |
Msa0628360 | Msa1152510 | 0.825497 | 4.540263e-54 | -8.615850e-47 |
Msa0648520 | Msa1152510 | 0.853144 | 2.900974e-61 | -8.615850e-47 |
Msa0650070 | Msa1152510 | 0.846280 | 2.397677e-59 | -8.615850e-47 |
Msa0659600 | Msa1152510 | 0.800035 | 1.740854e-48 | -8.615850e-47 |
Msa0662340 | Msa1152510 | 0.805484 | 1.305264e-49 | -8.615850e-47 |
Msa0682330 | Msa1152510 | 0.804998 | 1.650061e-49 | -8.615850e-47 |
Msa0682550 | Msa1152510 | 0.805933 | 1.050731e-49 | -8.615850e-47 |
Msa0683510 | Msa1152510 | 0.811994 | 5.299771e-51 | -8.615850e-47 |
Msa0684500 | Msa1152510 | 0.822111 | 2.820659e-53 | -8.615850e-47 |
Msa0691050 | Msa1152510 | 0.858451 | 8.167349e-63 | -8.615850e-47 |
Msa0692060 | Msa1152510 | 0.833986 | 3.890443e-56 | -8.615850e-47 |
Msa0693380 | Msa1152510 | 0.835418 | 1.697337e-56 | -8.615850e-47 |
Msa0698640 | Msa1152510 | 0.808322 | 3.278710e-50 | -8.615850e-47 |
Msa0710270 | Msa1152510 | 0.821848 | 3.245564e-53 | -8.615850e-47 |
Msa0712590 | Msa1152510 | 0.844769 | 6.159325e-59 | -8.615850e-47 |
Msa0718070 | Msa1152510 | 0.811198 | 7.893032e-51 | -8.615850e-47 |
Msa0751260 | Msa1152510 | 0.801560 | 8.498754e-49 | -8.615850e-47 |
Msa0752940 | Msa1152510 | 0.820391 | 7.031456e-53 | -8.615850e-47 |
Msa0756530 | Msa1152510 | 0.813494 | 2.488017e-51 | -8.615850e-47 |
Msa0760130 | Msa1152510 | 0.804127 | 2.507172e-49 | -8.615850e-47 |
Msa0795070 | Msa1152510 | 0.821641 | 3.624578e-53 | -8.615850e-47 |
Msa0795390 | Msa1152510 | 0.834974 | 2.197598e-56 | -8.615850e-47 |
Msa0811130 | Msa1152510 | 0.803119 | 4.058186e-49 | -8.615850e-47 |
Msa0816710 | Msa1152510 | 0.810034 | 1.408804e-50 | -8.615850e-47 |
Msa0824660 | Msa1152510 | 0.831722 | 1.420877e-55 | -8.615850e-47 |
Msa0836480 | Msa1152510 | 0.805730 | 1.159426e-49 | -8.615850e-47 |
Msa0839190 | Msa1152510 | 0.816052 | 6.745334e-52 | -8.615850e-47 |
Msa0121090 | Msa1152510 | 0.802700 | 4.954247e-49 | -8.615850e-47 |
Msa0122810 | Msa1152510 | 0.815292 | 9.959786e-52 | -8.615850e-47 |
Msa0123100 | Msa1152510 | 0.826497 | 2.625773e-54 | -8.615850e-47 |
Msa0124340 | Msa1152510 | 0.818334 | 2.069364e-52 | -8.615850e-47 |
Msa0125770 | Msa1152510 | 0.812068 | 5.105142e-51 | -8.615850e-47 |
Msa0128220 | Msa1152510 | 0.805402 | 1.358177e-49 | -8.615850e-47 |
Msa0128650 | Msa1152510 | 0.821485 | 3.937248e-53 | -8.615850e-47 |
Msa0133720 | Msa1152510 | 0.817808 | 2.720992e-52 | -8.615850e-47 |
Msa0133820 | Msa1152510 | 0.805814 | 1.113204e-49 | -8.615850e-47 |
Msa0134210 | Msa1152510 | 0.832546 | 8.889250e-56 | -8.615850e-47 |
Msa0142200 | Msa1152510 | 0.804518 | 2.078784e-49 | -8.615850e-47 |
Msa0149300 | Msa1152510 | 0.808550 | 2.931279e-50 | -8.615850e-47 |
Msa0154320 | Msa1152510 | 0.843307 | 1.518421e-58 | -8.615850e-47 |
Msa0154440 | Msa1152510 | 0.809577 | 1.766859e-50 | -8.615850e-47 |
Msa0160010 | Msa1152510 | 0.800178 | 1.628138e-48 | -8.615850e-47 |
Msa0165300 | Msa1152510 | 0.809674 | 1.683896e-50 | -8.615850e-47 |
Msa0170140 | Msa1152510 | 0.810995 | 8.736581e-51 | -8.615850e-47 |
Msa0173890 | Msa1152510 | 0.826951 | 2.046327e-54 | -8.615850e-47 |
Msa0174320 | Msa1152510 | 0.823831 | 1.120826e-53 | -8.615850e-47 |
Msa0174690 | Msa1152510 | 0.814596 | 1.421146e-51 | -8.615850e-47 |
Msa0178510 | Msa1152510 | 0.801476 | 8.845154e-49 | -8.615850e-47 |
Msa0181230 | Msa1152510 | 0.827607 | 1.424900e-54 | -8.615850e-47 |
Msa0186640 | Msa1152510 | 0.802438 | 5.611326e-49 | -8.615850e-47 |
Msa0187030 | Msa1152510 | 0.834418 | 3.032137e-56 | -8.615850e-47 |
Msa0190690 | Msa1152510 | 0.805101 | 1.570326e-49 | -8.615850e-47 |
Msa0198520 | Msa1152510 | 0.803685 | 3.098544e-49 | -8.615850e-47 |
Msa0198530 | Msa1152510 | 0.805656 | 1.201187e-49 | -8.615850e-47 |
Msa0205850 | Msa1152510 | 0.804327 | 2.278107e-49 | -8.615850e-47 |
Msa0218810 | Msa1152510 | 0.814072 | 1.856202e-51 | -8.615850e-47 |
Msa0223490 | Msa1152510 | 0.801506 | 8.721701e-49 | -8.615850e-47 |
Msa0223690 | Msa1152510 | 0.806384 | 8.445440e-50 | -8.615850e-47 |
Msa0227470 | Msa1152510 | 0.813954 | 1.970443e-51 | -8.615850e-47 |
Msa0389880 | Msa1152510 | 0.844011 | 9.841610e-59 | -8.615850e-47 |
Msa0417880 | Msa1152510 | 0.821585 | 3.733690e-53 | -8.615850e-47 |
Msa0432380 | Msa1152510 | 0.801966 | 7.017514e-49 | -8.615850e-47 |
Msa0451070 | Msa1152510 | 0.810236 | 1.274269e-50 | -8.615850e-47 |
Msa0452920 | Msa1152510 | 0.818823 | 1.603246e-52 | -8.615850e-47 |
Msa0452960 | Msa1152510 | 0.807397 | 5.157386e-50 | -8.615850e-47 |
Msa0458480 | Msa1152510 | 0.800757 | 1.240505e-48 | -8.615850e-47 |
Msa0460480 | Msa1152510 | 0.804929 | 1.705977e-49 | -8.615850e-47 |
Msa0467430 | Msa1152510 | 0.809511 | 1.824766e-50 | -8.615850e-47 |
Msa0468800 | Msa1152510 | 0.801233 | 9.915354e-49 | -8.615850e-47 |
Msa0470690 | Msa1152510 | 0.803388 | 3.570765e-49 | -8.615850e-47 |
Msa1010070 | Msa1152510 | 0.816426 | 5.562879e-52 | -8.615850e-47 |
Msa1024740 | Msa1152510 | 0.916392 | 1.882995e-85 | -8.615850e-47 |
Msa1031930 | Msa1152510 | 0.855212 | 7.341281e-62 | -8.615850e-47 |
Msa1032170 | Msa1152510 | 0.820463 | 6.770279e-53 | -8.615850e-47 |
Msa1035960 | Msa1152510 | 0.801794 | 7.611882e-49 | -8.615850e-47 |
Msa1038080 | Msa1152510 | 0.801639 | 8.188302e-49 | -8.615850e-47 |
Msa1051600 | Msa1152510 | 0.800574 | 1.352255e-48 | -8.615850e-47 |
Msa1053200 | Msa1152510 | 0.800765 | 1.235915e-48 | -8.615850e-47 |
Msa1063500 | Msa1152510 | 0.887366 | 1.519445e-72 | -8.615850e-47 |
Msa1071770 | Msa1152510 | 0.830432 | 2.947352e-55 | -8.615850e-47 |
Msa1082500 | Msa1152510 | 0.825041 | 5.819001e-54 | -8.615850e-47 |
Msa1102770 | Msa1152510 | 0.813226 | 2.849720e-51 | -8.615850e-47 |
Msa0243250 | Msa1152510 | 0.800145 | 1.653541e-48 | -8.615850e-47 |
Msa0248970 | Msa1152510 | 0.805543 | 1.268870e-49 | -8.615850e-47 |
Msa0251080 | Msa1152510 | 0.824805 | 6.614313e-54 | -8.615850e-47 |
Msa0264590 | Msa1152510 | 0.811500 | 6.788142e-51 | -8.615850e-47 |
Msa0264780 | Msa1152510 | 0.809997 | 1.435113e-50 | -8.615850e-47 |
Msa0276920 | Msa1152510 | 0.864428 | 1.224479e-64 | -8.615850e-47 |
Msa0283450 | Msa1152510 | 0.801979 | 6.973394e-49 | -8.615850e-47 |
Msa0283520 | Msa1152510 | 0.803011 | 4.272027e-49 | -8.615850e-47 |
Msa0287310 | Msa1152510 | 0.806573 | 7.701886e-50 | -8.615850e-47 |
Msa0295020 | Msa1152510 | 0.801484 | 8.812446e-49 | -8.615850e-47 |
Msa0297790 | Msa1152510 | 0.801251 | 9.835669e-49 | -8.615850e-47 |
Msa0299890 | Msa1152510 | 0.802597 | 5.202166e-49 | -8.615850e-47 |
Msa0311420 | Msa1152510 | 0.814157 | 1.777434e-51 | -8.615850e-47 |
Msa0316800 | Msa1152510 | 0.801228 | 9.941298e-49 | -8.615850e-47 |
Msa0317730 | Msa1152510 | 0.839775 | 1.295150e-57 | -8.615850e-47 |
Msa0318720 | Msa1152510 | 0.827374 | 1.620861e-54 | -8.615850e-47 |
Msa0319940 | Msa1152510 | 0.805988 | 1.023224e-49 | -8.615850e-47 |
Msa0325850 | Msa1152510 | 0.807472 | 4.972084e-50 | -8.615850e-47 |
Msa0332000 | Msa1152510 | 0.803888 | 2.811020e-49 | -8.615850e-47 |
Msa0333920 | Msa1152510 | 0.809691 | 1.669327e-50 | -8.615850e-47 |
Msa0334040 | Msa1152510 | 0.809265 | 2.061270e-50 | -8.615850e-47 |
Msa0334350 | Msa1152510 | 0.807269 | 5.489555e-50 | -8.615850e-47 |
Msa0335040 | Msa1152510 | 0.809350 | 1.975890e-50 | -8.615850e-47 |
Msa0335800 | Msa1152510 | 0.821483 | 3.941142e-53 | -8.615850e-47 |
Msa0339980 | Msa1152510 | 0.817137 | 3.854326e-52 | -8.615850e-47 |
Msa0341910 | Msa1152510 | 0.817692 | 2.890956e-52 | -8.615850e-47 |
Msa0342010 | Msa1152510 | 0.807708 | 4.430555e-50 | -8.615850e-47 |
Msa0346700 | Msa1152510 | 0.800609 | 1.329766e-48 | -8.615850e-47 |
Msa0351380 | Msa1152510 | 0.801940 | 7.103361e-49 | -8.615850e-47 |
Msa0356890 | Msa1152510 | -0.816052 | 6.745708e-52 | -8.615850e-47 |
Msa0358890 | Msa1152510 | 0.830408 | 2.986471e-55 | -8.615850e-47 |
Msa0363350 | Msa1152510 | 0.802692 | 4.973244e-49 | -8.615850e-47 |
Msa1108790 | Msa1152510 | 0.910121 | 2.669840e-82 | -8.615850e-47 |
Msa1113800 | Msa1152510 | 0.819945 | 8.896188e-53 | -8.615850e-47 |
Msa1124310 | Msa1152510 | 0.828807 | 7.320607e-55 | -8.615850e-47 |
Msa1125940 | Msa1152510 | 0.817164 | 3.800494e-52 | -8.615850e-47 |
Msa1130550 | Msa1152510 | 0.818830 | 1.597525e-52 | -8.615850e-47 |
Msa1139890 | Msa1152510 | 0.807827 | 4.179424e-50 | -8.615850e-47 |
Msa1152510 | Msa1152990 | 0.818737 | 1.676625e-52 | -8.615850e-47 |
Msa1152510 | Msa1158830 | 0.831160 | 1.953706e-55 | -8.615850e-47 |
Msa1152510 | Msa1160310 | 0.801336 | 9.445892e-49 | -8.615850e-47 |
Msa1152510 | Msa1160500 | 0.801040 | 1.086350e-48 | -8.615850e-47 |
Msa1152510 | Msa1205370 | 0.807346 | 5.286247e-50 | -8.615850e-47 |
Msa1152510 | Msa1208160 | 0.806489 | 8.026138e-50 | -8.615850e-47 |
Msa1152510 | Msa1208430 | 0.800337 | 1.511225e-48 | -8.615850e-47 |
Msa1152510 | Msa1208890 | -0.805473 | 1.312458e-49 | -8.615850e-47 |
Msa1152510 | Msa1231240 | 0.811182 | 7.957864e-51 | -8.615850e-47 |
Msa1152510 | Msa1245940 | -0.806252 | 9.002649e-50 | -8.615850e-47 |
Msa1152510 | Msa1249920 | 0.806395 | 8.400153e-50 | -8.615850e-47 |
Msa1152510 | Msa1250290 | 0.807363 | 5.243595e-50 | -8.615850e-47 |
Msa1152510 | Msa1259070 | -0.809737 | 1.631785e-50 | -8.615850e-47 |
Msa1152510 | Msa1284040 | 0.805710 | 1.170346e-49 | -8.615850e-47 |
Msa1152510 | Msa1298370 | 0.819092 | 1.392545e-52 | -8.615850e-47 |
Msa1152510 | Msa1307210 | 0.819708 | 1.007596e-52 | -8.615850e-47 |
Msa1152510 | Msa1308140 | 0.802582 | 5.238592e-49 | -8.615850e-47 |
Msa1152510 | Msa1311960 | 0.835894 | 1.286024e-56 | -8.615850e-47 |
Msa1152510 | Msa1323050 | 0.807408 | 5.129050e-50 | -8.615850e-47 |
Msa1152510 | Msa1341520 | 0.807617 | 4.631567e-50 | -8.615850e-47 |
Msa1152510 | Msa1341570 | 0.832191 | 1.088068e-55 | -8.615850e-47 |
Msa1152510 | Msa1348880 | 0.821206 | 4.567448e-53 | -8.615850e-47 |
Msa1152510 | Msa1349550 | 0.821961 | 3.055797e-53 | -8.615850e-47 |
Msa1152510 | Msa1353470 | 0.821659 | 3.590454e-53 | -8.615850e-47 |
Msa1152510 | Msa1355800 | 0.814987 | 1.164611e-51 | -8.615850e-47 |
Msa1152510 | Msa1356830 | 0.807695 | 4.458482e-50 | -8.615850e-47 |
Msa1152510 | Msa1366300 | 0.806173 | 9.354506e-50 | -8.615850e-47 |
Msa1152510 | Msa1366600 | 0.813758 | 2.176378e-51 | -8.615850e-47 |
Msa1152510 | Msa1368430 | 0.803434 | 3.492573e-49 | -8.615850e-47 |
Msa1152510 | Msa1371640 | 0.815482 | 9.039863e-52 | -8.615850e-47 |
Msa1152510 | Msa1376200 | 0.813140 | 2.976043e-51 | -8.615850e-47 |
Msa1152510 | Msa1383230 | 0.817443 | 3.288492e-52 | -8.615850e-47 |
Msa1152510 | Msa1390120 | 0.806513 | 7.932268e-50 | -8.615850e-47 |
Msa1152510 | Msa1395530 | 0.809155 | 2.175609e-50 | -8.615850e-47 |
Msa1152510 | Msa1409870 | 0.800692 | 1.279292e-48 | -8.615850e-47 |
Msa1152510 | Msa1415940 | 0.816357 | 5.766935e-52 | -8.615850e-47 |
Msa1152510 | Msa1436480 | 0.817559 | 3.096351e-52 | -8.615850e-47 |
Msa1152510 | Msa1442820 | 0.800967 | 1.124225e-48 | -8.615850e-47 |
Msa1152510 | Msa1452120 | 0.808573 | 2.898828e-50 | -8.615850e-47 |
Msa1152510 | Msa1457430 | 0.821295 | 4.355352e-53 | -8.615850e-47 |
Msa1152510 | Msa1460020 | 0.801017 | 1.097931e-48 | -8.615850e-47 |
Msa1152510 | Msa1461300 | 0.808327 | 3.270665e-50 | -8.615850e-47 |
Msa0484780 | Msa1152510 | 0.828783 | 7.418126e-55 | -8.615850e-47 |
Msa0484840 | Msa1152510 | 0.807004 | 6.246965e-50 | -8.615850e-47 |
Msa0488790 | Msa1152510 | 0.807582 | 4.710137e-50 | -8.615850e-47 |
Msa0498450 | Msa1152510 | 0.825553 | 4.401955e-54 | -8.615850e-47 |
Msa0505770 | Msa1152510 | 0.808762 | 2.640465e-50 | -8.615850e-47 |
Msa0520700 | Msa1152510 | 0.800300 | 1.537540e-48 | -8.615850e-47 |
Msa0548620 | Msa1152510 | 0.821200 | 4.582713e-53 | -8.615850e-47 |
Msa0548660 | Msa1152510 | 0.814056 | 1.870672e-51 | -8.615850e-47 |
Msa0557070 | Msa1152510 | 0.800812 | 1.208943e-48 | -8.615850e-47 |
Msa0574390 | Msa1152510 | 0.803697 | 3.079821e-49 | -8.615850e-47 |
Msa0576680 | Msa1152510 | 0.810607 | 1.059722e-50 | -8.615850e-47 |
Msa0581690 | Msa1152510 | 0.811322 | 7.417201e-51 | -8.615850e-47 |
Msa0584550 | Msa1152510 | 0.805510 | 1.289281e-49 | -8.615850e-47 |
Msa0587940 | Msa1152510 | 0.824938 | 6.154545e-54 | -8.615850e-47 |
Msa0844240 | Msa1152510 | 0.803988 | 2.679667e-49 | -8.615850e-47 |
Msa0863930 | Msa1152510 | 0.821691 | 3.528945e-53 | -8.615850e-47 |
Msa0866520 | Msa1152510 | 0.811285 | 7.557472e-51 | -8.615850e-47 |
Msa0870530 | Msa1152510 | 0.810554 | 1.087961e-50 | -8.615850e-47 |
Msa0900730 | Msa1152510 | 0.816792 | 4.607695e-52 | -8.615850e-47 |
Msa0906690 | Msa1152510 | 0.810009 | 1.425919e-50 | -8.615850e-47 |
Msa0926340 | Msa1152510 | 0.827331 | 1.659723e-54 | -8.615850e-47 |
Msa0926890 | Msa1152510 | 0.813984 | 1.940841e-51 | -8.615850e-47 |
Msa0933440 | Msa1152510 | 0.812108 | 5.003176e-51 | -8.615850e-47 |
Msa0939000 | Msa1152510 | 0.815327 | 9.782958e-52 | -8.615850e-47 |
Msa0954550 | Msa1152510 | 0.806488 | 8.030415e-50 | -8.615850e-47 |
Msa0964310 | Msa1152510 | 0.808784 | 2.613066e-50 | -8.615850e-47 |
Msa0964700 | Msa1152510 | 0.807185 | 5.719215e-50 | -8.615850e-47 |
Msa0969520 | Msa1152510 | 0.816437 | 5.533208e-52 | -8.615850e-47 |
Msa0974060 | Msa1152510 | 0.829687 | 4.477983e-55 | -8.615850e-47 |
Msa0975940 | Msa1152510 | 0.814692 | 1.353325e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1152510 | MtrunA17_Chr7g0242701 | 97.892 | 427 | 9 | 0 | 1 | 427 | 1 | 427 | 0.0 | 870 |
Msa1152510 | MtrunA17_Chr4g0006991 | 78.220 | 427 | 93 | 0 | 1 | 427 | 1 | 427 | 0.0 | 703 |
Msa1152510 | MtrunA17_Chr8g0360521 | 45.278 | 413 | 206 | 5 | 16 | 427 | 16 | 409 | 2.32e-129 | 379 |
Msa1152510 | MtrunA17_Chr5g0437601 | 42.254 | 426 | 234 | 6 | 3 | 427 | 10 | 424 | 8.84e-129 | 378 |
Msa1152510 | MtrunA17_Chr3g0113671 | 47.688 | 346 | 179 | 2 | 84 | 427 | 104 | 449 | 2.47e-125 | 370 |
Msa1152510 | MtrunA17_Chr3g0114101 | 40.000 | 425 | 254 | 1 | 3 | 427 | 7 | 430 | 1.52e-119 | 355 |
Msa1152510 | MtrunA17_Chr5g0437291 | 46.418 | 349 | 182 | 3 | 84 | 427 | 163 | 511 | 4.63e-119 | 356 |
Msa1152510 | MtrunA17_Chr4g0005481 | 46.243 | 346 | 181 | 4 | 83 | 427 | 105 | 446 | 2.11e-110 | 332 |
Msa1152510 | MtrunA17_Chr4g0005491 | 45.559 | 349 | 182 | 5 | 85 | 427 | 61 | 407 | 4.95e-110 | 330 |
Msa1152510 | MtrunA17_Chr7g0243301 | 43.343 | 353 | 192 | 5 | 81 | 427 | 59 | 409 | 7.30e-108 | 324 |
Msa1152510 | MtrunA17_Chr1g0210771 | 40.634 | 347 | 182 | 8 | 84 | 427 | 57 | 382 | 1.13e-89 | 276 |
Msa1152510 | MtrunA17_Chr1g0171171 | 39.655 | 348 | 185 | 8 | 83 | 427 | 50 | 375 | 3.63e-86 | 267 |
Msa1152510 | MtrunA17_Chr3g0105301 | 38.150 | 346 | 198 | 6 | 86 | 427 | 43 | 376 | 3.54e-85 | 265 |
Msa1152510 | MtrunA17_Chr5g0430371 | 37.883 | 359 | 197 | 10 | 82 | 427 | 54 | 399 | 6.12e-82 | 257 |
Msa1152510 | MtrunA17_Chr3g0097891 | 36.599 | 347 | 198 | 6 | 81 | 427 | 26 | 350 | 1.86e-81 | 254 |
Msa1152510 | MtrunA17_Chr5g0413271 | 37.197 | 371 | 211 | 10 | 64 | 427 | 121 | 476 | 3.51e-78 | 250 |
Msa1152510 | MtrunA17_Chr7g0269991 | 36.390 | 349 | 197 | 9 | 86 | 427 | 137 | 467 | 1.60e-75 | 243 |
Msa1152510 | MtrunA17_Chr4g0041011 | 36.550 | 342 | 192 | 7 | 86 | 427 | 47 | 363 | 4.46e-75 | 238 |
Msa1152510 | MtrunA17_Chr7g0258851 | 36.752 | 351 | 204 | 8 | 85 | 427 | 247 | 587 | 1.09e-74 | 244 |
Msa1152510 | MtrunA17_Chr1g0175671 | 37.322 | 351 | 202 | 9 | 85 | 427 | 169 | 509 | 3.26e-74 | 241 |
Msa1152510 | MtrunA17_Chr4g0071391 | 35.613 | 351 | 208 | 7 | 84 | 427 | 107 | 446 | 5.78e-74 | 238 |
Msa1152510 | MtrunA17_Chr5g0413851 | 38.304 | 342 | 187 | 9 | 86 | 427 | 42 | 359 | 3.05e-73 | 234 |
Msa1152510 | MtrunA17_Chr2g0314801 | 36.127 | 346 | 198 | 7 | 83 | 427 | 30 | 353 | 3.93e-73 | 233 |
Msa1152510 | MtrunA17_Chr2g0325481 | 35.652 | 345 | 197 | 8 | 83 | 427 | 47 | 366 | 5.62e-73 | 233 |
Msa1152510 | MtrunA17_Chr4g0045941 | 35.362 | 345 | 199 | 7 | 83 | 427 | 30 | 350 | 1.43e-72 | 231 |
Msa1152510 | MtrunA17_Chr4g0068111 | 33.242 | 364 | 224 | 6 | 71 | 427 | 102 | 453 | 7.72e-72 | 233 |
Msa1152510 | MtrunA17_Chr1g0213281 | 32.432 | 407 | 240 | 11 | 32 | 427 | 133 | 515 | 1.68e-71 | 234 |
Msa1152510 | MtrunA17_Chr2g0287901 | 37.534 | 365 | 195 | 10 | 79 | 427 | 90 | 437 | 2.70e-71 | 231 |
Msa1152510 | MtrunA17_Chr4g0045951 | 35.965 | 342 | 195 | 7 | 86 | 427 | 45 | 362 | 3.34e-71 | 228 |
Msa1152510 | MtrunA17_Chr2g0283581 | 35.072 | 345 | 199 | 8 | 83 | 427 | 39 | 358 | 5.84e-71 | 228 |
Msa1152510 | MtrunA17_Chr3g0085071 | 35.429 | 350 | 194 | 10 | 82 | 427 | 42 | 363 | 5.09e-70 | 225 |
Msa1152510 | MtrunA17_Chr3g0085081 | 34.857 | 350 | 196 | 10 | 82 | 427 | 27 | 348 | 6.38e-70 | 224 |
Msa1152510 | MtrunA17_Chr2g0314791 | 35.429 | 350 | 189 | 9 | 84 | 427 | 27 | 345 | 1.73e-68 | 221 |
Msa1152510 | MtrunA17_Chr3g0091031 | 34.286 | 350 | 198 | 10 | 82 | 427 | 27 | 348 | 2.09e-68 | 221 |
Msa1152510 | MtrunA17_Chr8g0368461 | 35.165 | 364 | 205 | 9 | 84 | 427 | 176 | 528 | 1.99e-67 | 223 |
Msa1152510 | MtrunA17_Chr3g0126021 | 31.308 | 428 | 248 | 10 | 19 | 427 | 59 | 459 | 1.28e-65 | 217 |
Msa1152510 | MtrunA17_Chr7g0259711 | 32.033 | 359 | 216 | 8 | 83 | 427 | 88 | 432 | 5.84e-63 | 209 |
Msa1152510 | MtrunA17_Chr8g0384151 | 31.909 | 351 | 210 | 6 | 84 | 427 | 88 | 416 | 1.22e-62 | 208 |
Msa1152510 | MtrunA17_Chr1g0209921 | 37.553 | 237 | 136 | 6 | 83 | 317 | 41 | 267 | 5.75e-50 | 170 |
Msa1152510 | MtrunA17_Chr1g0178081 | 31.880 | 367 | 149 | 14 | 84 | 427 | 53 | 341 | 1.60e-47 | 166 |
Msa1152510 | MtrunA17_Chr8g0391481 | 30.685 | 365 | 215 | 14 | 84 | 427 | 25 | 372 | 1.13e-42 | 154 |
Msa1152510 | MtrunA17_Chr5g0414091 | 31.117 | 376 | 207 | 15 | 81 | 427 | 79 | 431 | 4.65e-42 | 154 |
Msa1152510 | MtrunA17_Chr5g0414051 | 28.906 | 384 | 215 | 15 | 75 | 427 | 64 | 420 | 4.15e-40 | 148 |
Msa1152510 | MtrunA17_Chr5g0414061 | 30.447 | 358 | 222 | 13 | 85 | 427 | 93 | 438 | 5.87e-40 | 148 |
Msa1152510 | MtrunA17_Chr7g0226991 | 28.676 | 408 | 237 | 17 | 53 | 427 | 16 | 402 | 1.41e-38 | 144 |
Msa1152510 | MtrunA17_Chr8g0347321 | 26.744 | 430 | 269 | 14 | 28 | 427 | 26 | 439 | 4.35e-38 | 143 |
Msa1152510 | MtrunA17_Chr8g0387921 | 25.293 | 427 | 278 | 12 | 20 | 427 | 15 | 419 | 5.00e-38 | 142 |
Msa1152510 | MtrunA17_Chr6g0456691 | 28.211 | 436 | 249 | 18 | 18 | 427 | 22 | 419 | 8.15e-38 | 142 |
Msa1152510 | MtrunA17_Chr3g0140371 | 29.891 | 368 | 207 | 14 | 86 | 427 | 18 | 360 | 8.60e-38 | 140 |
Msa1152510 | MtrunA17_Chr5g0414041 | 30.939 | 362 | 225 | 14 | 81 | 427 | 82 | 433 | 3.23e-36 | 138 |
Msa1152510 | MtrunA17_Chr6g0456681 | 30.194 | 361 | 223 | 12 | 83 | 427 | 61 | 408 | 6.94e-35 | 134 |
Msa1152510 | MtrunA17_Chr2g0283851 | 29.223 | 373 | 204 | 15 | 87 | 427 | 56 | 400 | 9.14e-35 | 133 |
Msa1152510 | MtrunA17_Chr6g0476041 | 25.243 | 412 | 262 | 15 | 40 | 427 | 125 | 514 | 2.80e-34 | 134 |
Msa1152510 | MtrunA17_Chr1g0188191 | 25.479 | 365 | 232 | 14 | 86 | 427 | 234 | 581 | 1.89e-33 | 132 |
Msa1152510 | MtrunA17_Chr8g0384421 | 25.737 | 373 | 219 | 14 | 83 | 427 | 130 | 472 | 3.13e-32 | 127 |
Msa1152510 | MtrunA17_Chr4g0070341 | 27.322 | 366 | 216 | 13 | 86 | 427 | 132 | 471 | 1.04e-31 | 125 |
Msa1152510 | MtrunA17_Chr4g0049421 | 26.975 | 367 | 221 | 15 | 86 | 427 | 48 | 392 | 2.66e-31 | 123 |
Msa1152510 | MtrunA17_Chr6g0451321 | 25.348 | 359 | 242 | 10 | 82 | 427 | 112 | 457 | 3.31e-30 | 121 |
Msa1152510 | MtrunA17_Chr6g0455901 | 26.446 | 363 | 233 | 12 | 84 | 427 | 69 | 416 | 2.55e-28 | 115 |
Msa1152510 | MtrunA17_Chr7g0221271 | 31.818 | 220 | 117 | 6 | 7 | 213 | 6 | 205 | 6.57e-24 | 98.6 |
Msa1152510 | MtrunA17_Chr7g0221291 | 34.302 | 172 | 106 | 5 | 7 | 178 | 6 | 170 | 1.09e-22 | 94.4 |
Msa1152510 | MtrunA17_Chr2g0287931 | 34.921 | 126 | 75 | 1 | 146 | 264 | 1 | 126 | 1.94e-16 | 75.5 |
Msa1152510 | MtrunA17_Chr3g0085101 | 34.906 | 106 | 61 | 2 | 284 | 386 | 6 | 106 | 1.42e-15 | 72.8 |
Msa1152510 | MtrunA17_Chr1g0209931 | 35.294 | 102 | 50 | 2 | 326 | 427 | 7 | 92 | 6.55e-14 | 67.4 |
Msa1152510 | MtrunA17_Chr5g0429211 | 41.096 | 73 | 43 | 0 | 142 | 214 | 195 | 267 | 1.58e-11 | 64.7 |
Msa1152510 | MtrunA17_Chr5g0429191 | 54.167 | 48 | 17 | 2 | 374 | 420 | 2 | 45 | 5.40e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1152510 | AT5G01360.1 | 64.371 | 421 | 144 | 2 | 13 | 427 | 14 | 434 | 0.0 | 568 |
Msa1152510 | AT5G01360.2 | 70.339 | 354 | 104 | 1 | 75 | 427 | 25 | 378 | 0.0 | 547 |
Msa1152510 | AT1G73140.1 | 48.159 | 353 | 175 | 3 | 76 | 427 | 60 | 405 | 7.27e-126 | 370 |
Msa1152510 | AT3G55990.1 | 47.486 | 358 | 186 | 2 | 68 | 423 | 122 | 479 | 1.69e-125 | 372 |
Msa1152510 | AT2G40150.1 | 47.989 | 348 | 173 | 2 | 84 | 423 | 69 | 416 | 4.06e-123 | 364 |
Msa1152510 | AT2G40320.1 | 39.416 | 411 | 239 | 1 | 17 | 427 | 22 | 422 | 3.92e-119 | 354 |
Msa1152510 | AT3G11030.1 | 44.348 | 345 | 191 | 1 | 84 | 427 | 104 | 448 | 3.32e-115 | 345 |
Msa1152510 | AT2G40160.2 | 44.126 | 349 | 190 | 5 | 84 | 427 | 75 | 423 | 2.01e-110 | 332 |
Msa1152510 | AT2G40160.1 | 44.348 | 345 | 187 | 5 | 84 | 423 | 75 | 419 | 3.05e-110 | 331 |
Msa1152510 | AT5G01620.2 | 40.399 | 401 | 216 | 9 | 36 | 427 | 63 | 449 | 8.22e-108 | 326 |
Msa1152510 | AT5G01620.1 | 40.399 | 401 | 216 | 9 | 36 | 427 | 63 | 449 | 8.22e-108 | 326 |
Msa1152510 | AT5G01620.3 | 43.678 | 348 | 190 | 5 | 82 | 427 | 114 | 457 | 3.41e-107 | 324 |
Msa1152510 | AT2G38320.1 | 42.618 | 359 | 198 | 5 | 75 | 427 | 48 | 404 | 7.00e-105 | 317 |
Msa1152510 | AT2G38320.2 | 43.750 | 320 | 172 | 5 | 114 | 427 | 4 | 321 | 1.69e-94 | 287 |
Msa1152510 | AT5G58600.1 | 37.571 | 354 | 204 | 8 | 79 | 427 | 59 | 400 | 5.10e-84 | 263 |
Msa1152510 | AT2G30900.1 | 40.290 | 345 | 181 | 9 | 86 | 427 | 43 | 365 | 6.71e-83 | 259 |
Msa1152510 | AT3G54260.1 | 38.551 | 345 | 188 | 8 | 86 | 427 | 51 | 374 | 1.08e-81 | 256 |
Msa1152510 | AT3G62390.1 | 37.784 | 352 | 196 | 9 | 84 | 427 | 136 | 472 | 4.43e-81 | 258 |
Msa1152510 | AT1G78710.1 | 36.705 | 346 | 196 | 7 | 82 | 427 | 34 | 356 | 1.32e-79 | 250 |
Msa1152510 | AT5G20590.1 | 36.676 | 349 | 204 | 6 | 86 | 427 | 141 | 479 | 4.29e-78 | 250 |
Msa1152510 | AT3G12060.1 | 35.248 | 383 | 218 | 8 | 52 | 427 | 176 | 535 | 1.00e-77 | 251 |
Msa1152510 | AT5G06700.1 | 37.429 | 350 | 201 | 8 | 86 | 427 | 255 | 594 | 5.20e-77 | 251 |
Msa1152510 | AT2G34070.1 | 34.493 | 345 | 203 | 5 | 83 | 427 | 62 | 383 | 1.09e-76 | 244 |
Msa1152510 | AT2G42570.1 | 34.571 | 350 | 205 | 8 | 78 | 427 | 39 | 364 | 2.34e-76 | 242 |
Msa1152510 | AT2G31110.2 | 34.985 | 343 | 199 | 8 | 85 | 427 | 44 | 362 | 4.70e-76 | 241 |
Msa1152510 | AT5G49340.1 | 38.136 | 354 | 195 | 10 | 86 | 427 | 100 | 441 | 8.84e-76 | 243 |
Msa1152510 | AT1G29050.1 | 34.493 | 345 | 202 | 6 | 83 | 427 | 58 | 378 | 1.75e-74 | 238 |
Msa1152510 | AT3G14850.2 | 35.484 | 341 | 199 | 6 | 83 | 423 | 31 | 350 | 1.55e-72 | 232 |
Msa1152510 | AT2G40160.3 | 44.958 | 238 | 128 | 3 | 84 | 318 | 75 | 312 | 2.15e-72 | 230 |
Msa1152510 | AT1G48880.1 | 35.795 | 352 | 191 | 9 | 85 | 427 | 114 | 439 | 1.36e-71 | 232 |
Msa1152510 | AT2G30010.1 | 36.813 | 364 | 199 | 11 | 79 | 427 | 49 | 396 | 1.38e-71 | 231 |
Msa1152510 | AT2G30010.2 | 36.813 | 364 | 199 | 11 | 79 | 427 | 92 | 439 | 3.49e-71 | 231 |
Msa1152510 | AT1G60790.1 | 33.512 | 373 | 217 | 10 | 71 | 427 | 175 | 532 | 1.36e-67 | 224 |
Msa1152510 | AT3G06080.2 | 35.211 | 355 | 205 | 9 | 86 | 427 | 103 | 445 | 1.44e-63 | 212 |
Msa1152510 | AT5G19160.1 | 34.174 | 357 | 209 | 7 | 86 | 427 | 99 | 444 | 3.47e-62 | 208 |
Msa1152510 | AT5G06230.2 | 33.884 | 363 | 206 | 10 | 83 | 427 | 18 | 364 | 4.65e-60 | 200 |
Msa1152510 | AT5G06230.1 | 33.884 | 363 | 206 | 10 | 83 | 427 | 59 | 405 | 1.05e-59 | 200 |
Msa1152510 | AT3G62390.2 | 37.860 | 243 | 140 | 4 | 84 | 319 | 136 | 374 | 1.02e-56 | 192 |
Msa1152510 | AT1G78710.2 | 31.214 | 346 | 162 | 8 | 82 | 427 | 27 | 296 | 3.99e-55 | 185 |
Msa1152510 | AT2G30900.2 | 42.035 | 226 | 120 | 6 | 86 | 309 | 43 | 259 | 6.54e-54 | 181 |
Msa1152510 | AT5G58600.2 | 38.174 | 241 | 140 | 5 | 79 | 318 | 59 | 291 | 7.95e-54 | 181 |
Msa1152510 | AT3G11570.1 | 32.258 | 341 | 196 | 9 | 103 | 427 | 98 | 419 | 3.81e-53 | 183 |
Msa1152510 | AT2G31110.3 | 35.556 | 225 | 136 | 4 | 85 | 309 | 44 | 259 | 1.68e-51 | 174 |
Msa1152510 | AT5G20590.2 | 36.667 | 240 | 143 | 3 | 86 | 318 | 141 | 378 | 4.90e-51 | 176 |
Msa1152510 | AT2G34070.2 | 32.103 | 271 | 162 | 4 | 157 | 427 | 1 | 249 | 5.63e-51 | 172 |
Msa1152510 | AT5G19160.2 | 37.083 | 240 | 142 | 3 | 86 | 318 | 99 | 336 | 6.36e-48 | 167 |
Msa1152510 | AT3G14850.1 | 32.959 | 267 | 159 | 5 | 157 | 423 | 1 | 247 | 3.80e-47 | 162 |
Msa1152510 | AT3G06080.1 | 37.759 | 241 | 139 | 5 | 86 | 318 | 103 | 340 | 3.28e-46 | 163 |
Msa1152510 | AT1G70230.1 | 28.169 | 355 | 228 | 9 | 82 | 427 | 75 | 411 | 7.86e-41 | 150 |
Msa1152510 | AT5G64020.1 | 28.997 | 369 | 218 | 16 | 86 | 427 | 57 | 408 | 7.95e-41 | 150 |
Msa1152510 | AT2G31110.1 | 33.621 | 232 | 131 | 7 | 196 | 427 | 6 | 214 | 5.79e-39 | 140 |
Msa1152510 | AT5G06230.3 | 32.669 | 251 | 150 | 5 | 83 | 318 | 59 | 305 | 1.27e-38 | 142 |
Msa1152510 | AT1G01430.1 | 27.348 | 362 | 236 | 12 | 83 | 427 | 96 | 447 | 1.22e-36 | 139 |
Msa1152510 | AT2G37720.1 | 27.957 | 372 | 216 | 15 | 81 | 427 | 138 | 482 | 1.92e-36 | 139 |
Msa1152510 | AT2G14530.1 | 26.446 | 363 | 234 | 10 | 83 | 427 | 59 | 406 | 2.77e-36 | 138 |
Msa1152510 | AT5G64470.3 | 27.401 | 354 | 231 | 13 | 86 | 427 | 55 | 394 | 6.89e-36 | 136 |
Msa1152510 | AT5G15890.1 | 27.708 | 397 | 245 | 13 | 50 | 427 | 149 | 522 | 1.09e-34 | 135 |
Msa1152510 | AT3G02440.1 | 27.978 | 361 | 222 | 13 | 86 | 427 | 127 | 468 | 4.84e-34 | 133 |
Msa1152510 | AT3G02440.2 | 27.978 | 361 | 222 | 13 | 86 | 427 | 135 | 476 | 5.08e-34 | 133 |
Msa1152510 | AT4G25360.1 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 1.00e-33 | 132 |
Msa1152510 | AT4G25360.2 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 1.00e-33 | 132 |
Msa1152510 | AT4G01080.1 | 24.432 | 352 | 244 | 10 | 83 | 424 | 88 | 427 | 4.35e-33 | 129 |
Msa1152510 | AT5G64470.2 | 27.072 | 362 | 228 | 15 | 86 | 427 | 55 | 400 | 2.58e-32 | 127 |
Msa1152510 | AT5G51640.1 | 26.076 | 395 | 241 | 16 | 59 | 427 | 119 | 488 | 7.43e-32 | 127 |
Msa1152510 | AT5G20680.6 | 25.064 | 391 | 252 | 15 | 55 | 427 | 90 | 457 | 2.29e-31 | 125 |
Msa1152510 | AT4G23790.1 | 26.400 | 375 | 229 | 14 | 80 | 427 | 73 | 427 | 3.05e-31 | 124 |
Msa1152510 | AT5G20680.2 | 25.064 | 391 | 252 | 15 | 55 | 427 | 166 | 533 | 4.32e-31 | 125 |
Msa1152510 | AT5G20680.4 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 4.55e-31 | 125 |
Msa1152510 | AT5G20680.1 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 4.55e-31 | 125 |
Msa1152510 | AT5G20680.3 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 4.55e-31 | 125 |
Msa1152510 | AT5G20680.5 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 4.55e-31 | 125 |
Msa1152510 | AT5G15900.1 | 27.596 | 366 | 222 | 15 | 84 | 427 | 65 | 409 | 6.88e-30 | 120 |
Msa1152510 | AT5G15900.2 | 27.596 | 366 | 222 | 15 | 84 | 427 | 84 | 428 | 8.97e-30 | 120 |
Msa1152510 | AT4G11090.1 | 25.333 | 375 | 231 | 14 | 80 | 427 | 73 | 425 | 2.56e-29 | 119 |
Msa1152510 | AT3G28150.1 | 25.549 | 364 | 228 | 12 | 85 | 427 | 69 | 410 | 1.76e-26 | 110 |
Msa1152510 | AT5G64470.4 | 27.509 | 269 | 177 | 11 | 86 | 343 | 55 | 316 | 1.29e-19 | 89.4 |
Msa1152510 | AT5G64470.1 | 26.449 | 276 | 186 | 10 | 86 | 350 | 55 | 324 | 2.13e-19 | 89.0 |
Find 85 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGAAGACTTGGGCTAAT+TGG | 0.164498 | 7_4:+38209848 | Msa1152510:CDS |
GAAAATTGTCTTTCTATATA+TGG | 0.208909 | 7_4:-38208303 | None:intergenic |
GCAACATTGCCAATGGAAAA+TGG | 0.220734 | 7_4:+38208235 | Msa1152510:CDS |
ACAAGGTTTGAACTTGAAAA+TGG | 0.230325 | 7_4:-38207779 | None:intergenic |
AATATTTGATTCCATGTATC+TGG | 0.237560 | 7_4:-38210666 | None:intergenic |
TCCTCAGTGTATACTGAAAA+TGG | 0.241217 | 7_4:+38210567 | Msa1152510:CDS |
CTTGGCAAGGTGCAATCTTC+TGG | 0.245799 | 7_4:-38208378 | None:intergenic |
TTTAGTCTGGTGTTCTTTCT+AGG | 0.269729 | 7_4:-38207802 | None:intergenic |
CCTTTCCTCATGATCCCTTC+TGG | 0.271041 | 7_4:+38207640 | Msa1152510:exon |
CTTTCATGTTGCCCCAATCT+TGG | 0.282311 | 7_4:-38210377 | None:intergenic |
ATTTCAGAATATAGAATTGA+TGG | 0.347402 | 7_4:+38210540 | Msa1152510:CDS |
AACACTGACATACATTTCAT+TGG | 0.355620 | 7_4:+38209316 | Msa1152510:CDS |
TTTGAAGACTTGGGCTAATT+GGG | 0.366796 | 7_4:+38209849 | Msa1152510:CDS |
TTAAAGCATAGTATGTGTTT+TGG | 0.371629 | 7_4:-38207483 | None:intergenic |
CATTTACCAGAAGCCAAGAT+TGG | 0.374143 | 7_4:+38210364 | Msa1152510:intron |
GGGAAAAGACTACTATTTGT+AGG | 0.402810 | 7_4:+38208902 | Msa1152510:CDS |
ATGCTAGTATAGAATTCTAC+TGG | 0.404319 | 7_4:+38209272 | Msa1152510:CDS |
ACAAGTTAGCTTTGAAGACT+TGG | 0.409219 | 7_4:+38209839 | Msa1152510:CDS |
CAAATAGAGATGATAATGAT+AGG | 0.414378 | 7_4:-38207697 | None:intergenic |
CAAGTTATGTCAGTGTAGAT+TGG | 0.416949 | 7_4:-38208279 | None:intergenic |
CAACATTGCCAATGGAAAAT+GGG | 0.423964 | 7_4:+38208236 | Msa1152510:CDS |
TATGGTGGATGAGTGGTTCT+AGG | 0.424096 | 7_4:+38209431 | Msa1152510:CDS |
TGTAGATTGGCTTTATTGAT+TGG | 0.426931 | 7_4:-38208266 | None:intergenic |
ATTTACCAGAAGCCAAGATT+GGG | 0.436736 | 7_4:+38210365 | Msa1152510:intron |
TTCACTTCAAAGAAATCAAT+GGG | 0.450238 | 7_4:+38208928 | Msa1152510:CDS |
TGCATACATTGGTGTTTGCC+TGG | 0.450244 | 7_4:+38210639 | Msa1152510:CDS |
CTGGTGTTCTTTCTAGGACA+AGG | 0.456429 | 7_4:-38207796 | None:intergenic |
AGATTCTGATTATCAACATT+GGG | 0.458543 | 7_4:+38208347 | Msa1152510:CDS |
TCATTTAGCAATGGATTTGA+AGG | 0.461734 | 7_4:+38209787 | Msa1152510:CDS |
ATTCACTTCAAAGAAATCAA+TGG | 0.464902 | 7_4:+38208927 | Msa1152510:CDS |
GAAGCATTGGGGAACTGGTT+CGG | 0.469422 | 7_4:+38210440 | Msa1152510:CDS |
AAAGAAAAGGATAATAAAAG+TGG | 0.472940 | 7_4:+38209345 | Msa1152510:CDS |
ATTCTACTGGGCCCCATACC+TGG | 0.476362 | 7_4:+38209285 | Msa1152510:CDS |
GTGTTAGACTCAACCAGGTA+TGG | 0.478801 | 7_4:-38209298 | None:intergenic |
GGAAAAGACTACTATTTGTA+GGG | 0.479501 | 7_4:+38208903 | Msa1152510:CDS |
AGGGTAAGAATGAGTTGAAA+GGG | 0.481191 | 7_4:-38207427 | None:intergenic |
GAGATGATAATGATAGGAAA+AGG | 0.487294 | 7_4:-38207691 | None:intergenic |
AAGGAATTAGAATGAATTAG+TGG | 0.487663 | 7_4:-38207591 | None:intergenic |
AAAGCTAACTTGTATGCTAC+TGG | 0.494526 | 7_4:-38209829 | None:intergenic |
CAGATTCTGATTATCAACAT+TGG | 0.499692 | 7_4:+38208346 | Msa1152510:CDS |
TGTTAGACTCAACCAGGTAT+GGG | 0.502247 | 7_4:-38209297 | None:intergenic |
CTATCAATCCAAACAAAACA+AGG | 0.508070 | 7_4:+38209881 | Msa1152510:CDS |
TGCCTGGTGTTCCAGATACA+TGG | 0.510835 | 7_4:+38210655 | Msa1152510:CDS |
GAGGGTAAGAATGAGTTGAA+AGG | 0.515198 | 7_4:-38207428 | None:intergenic |
CAAGTTAGCTTTGAAGACTT+GGG | 0.522945 | 7_4:+38209840 | Msa1152510:CDS |
CTGATTATCAACATTGGGAG+TGG | 0.526215 | 7_4:+38208352 | Msa1152510:CDS |
AAGCGAGCAAAATTAACCCT+TGG | 0.526936 | 7_4:-38210854 | None:intergenic |
TTTGTGAGCCATACCTTGCT+TGG | 0.533318 | 7_4:+38207251 | Msa1152510:five_prime_UTR |
TTAATATACATCACCAAGCA+AGG | 0.536471 | 7_4:-38207264 | None:intergenic |
ATGCAACATGGATTGATGAC+AGG | 0.540613 | 7_4:+38208190 | Msa1152510:CDS |
CATTTAGCAATGGATTTGAA+GGG | 0.555614 | 7_4:+38209788 | Msa1152510:CDS |
AGATGATAAGAAAGTTGATG+AGG | 0.555639 | 7_4:+38208158 | Msa1152510:intron |
GTTACATTGATGAATGTCAC+TGG | 0.556231 | 7_4:-38210513 | None:intergenic |
TCATTGGAGATACAAAGAAA+AGG | 0.557285 | 7_4:+38209332 | Msa1152510:CDS |
ATACATCACCAAGCAAGGTA+TGG | 0.561071 | 7_4:-38207259 | None:intergenic |
CATGTAGAATATTTATCATG+TGG | 0.564503 | 7_4:-38207398 | None:intergenic |
GAATAAGCTTAATAGTGAGA+AGG | 0.567781 | 7_4:-38207610 | None:intergenic |
TCATTCAGTCTTCAAAGTCA+AGG | 0.570752 | 7_4:+38209018 | Msa1152510:CDS |
AATTGTTAAGTGAAGAAGAG+AGG | 0.575802 | 7_4:+38210595 | Msa1152510:CDS |
AGATGGGGTTCATTTAGCAA+TGG | 0.578823 | 7_4:+38209778 | Msa1152510:intron |
GAAGAATGCAACATTGCCAA+TGG | 0.580954 | 7_4:+38208228 | Msa1152510:CDS |
TTCCATGTATCTGGAACACC+AGG | 0.581846 | 7_4:-38210657 | None:intergenic |
ATGTAGAATATTTATCATGT+GGG | 0.583411 | 7_4:-38207397 | None:intergenic |
GGAATAATGAAAATCCATAG+AGG | 0.592887 | 7_4:+38207661 | Msa1152510:CDS |
CAGAAGATTGCACCTTGCCA+AGG | 0.601981 | 7_4:+38208379 | Msa1152510:CDS |
GAAAAGACTACTATTTGTAG+GGG | 0.609179 | 7_4:+38208904 | Msa1152510:CDS |
GAGAAAGACCTTGTGTGTGT+TGG | 0.609531 | 7_4:-38209925 | None:intergenic |
CAGTGTATACTGAAAATGGA+GGG | 0.619439 | 7_4:+38210571 | Msa1152510:CDS |
TTTACCAGAAGCCAAGATTG+GGG | 0.623905 | 7_4:+38210366 | Msa1152510:intron |
CCAGAAGGGATCATGAGGAA+AGG | 0.626313 | 7_4:-38207640 | None:intergenic |
CAATGTCACCAACACACACA+AGG | 0.632942 | 7_4:+38209917 | Msa1152510:CDS |
AAAATGCAGATTGCATACAT+TGG | 0.635099 | 7_4:+38210628 | Msa1152510:CDS |
GTTAGACTCAACCAGGTATG+GGG | 0.635629 | 7_4:-38209296 | None:intergenic |
ACCACTCATCCACCATACAT+AGG | 0.637859 | 7_4:-38209425 | None:intergenic |
TGTCAGTGTTAGACTCAACC+AGG | 0.641142 | 7_4:-38209303 | None:intergenic |
ATACATAGGTATTGAAAACA+AGG | 0.643617 | 7_4:-38209411 | None:intergenic |
TGCTAGTATAGAATTCTACT+GGG | 0.645271 | 7_4:+38209273 | Msa1152510:CDS |
TTATTCCAGAAGGGATCATG+AGG | 0.647125 | 7_4:-38207645 | None:intergenic |
GTGTGGAACTTACCTTGGCA+AGG | 0.655568 | 7_4:-38208391 | None:intergenic |
AGGAGATTGTAAATGCAACA+TGG | 0.660136 | 7_4:+38208178 | Msa1152510:CDS |
ACCTATGTATGGTGGATGAG+TGG | 0.661766 | 7_4:+38209424 | Msa1152510:CDS |
TATCAATCCAAACAAAACAA+GGG | 0.665595 | 7_4:+38209882 | Msa1152510:CDS |
GGATAAACGTATAATGAGTG+TGG | 0.666583 | 7_4:+38210461 | Msa1152510:CDS |
TCAGTGTATACTGAAAATGG+AGG | 0.667022 | 7_4:+38210570 | Msa1152510:CDS |
TCAATGAGACAAAGCCAGTG+AGG | 0.681040 | 7_4:+38210412 | Msa1152510:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAATTATTTTTTACAGA+GGG | - | chr7_4:38208517-38208536 | None:intergenic | 10.0% |
!!! | TAAATAATTATTTTTTACAG+AGG | - | chr7_4:38208518-38208537 | None:intergenic | 10.0% |
!! | TATGATATCTATATTTATAA+GGG | - | chr7_4:38208796-38208815 | None:intergenic | 10.0% |
!! | ATATGATATCTATATTTATA+AGG | - | chr7_4:38208797-38208816 | None:intergenic | 10.0% |
!! | TTAATGATTTAATTCAAATA+GGG | - | chr7_4:38209483-38209502 | None:intergenic | 10.0% |
!! | TTTAATGATTTAATTCAAAT+AGG | - | chr7_4:38209484-38209503 | None:intergenic | 10.0% |
!! | ATCATTGCATAAAAAATTTA+GGG | - | chr7_4:38208110-38208129 | None:intergenic | 15.0% |
!!! | CAATTTTCTTGTATAAAAAA+TGG | + | chr7_4:38208318-38208337 | Msa1152510:CDS | 15.0% |
!! | ACATCAAATTACAAAATTTA+AGG | - | chr7_4:38208660-38208679 | None:intergenic | 15.0% |
!!! | TTTTTTTACAGAAAATAAAC+TGG | + | chr7_4:38208736-38208755 | Msa1152510:intron | 15.0% |
!! | GATTAAGTTAATAGATTATT+GGG | - | chr7_4:38209056-38209075 | None:intergenic | 15.0% |
!! | AGATTAAGTTAATAGATTAT+TGG | - | chr7_4:38209057-38209076 | None:intergenic | 15.0% |
!! | AATAATCTATTAACTTAATC+TGG | + | chr7_4:38209056-38209075 | Msa1152510:intron | 15.0% |
!! | ATAATCTATTAACTTAATCT+GGG | + | chr7_4:38209057-38209076 | Msa1152510:intron | 15.0% |
!!! | AAGTTATTACTTTAACTTTA+AGG | + | chr7_4:38209185-38209204 | Msa1152510:intron | 15.0% |
!! | ATGTAGAATATTTATCATGT+GGG | - | chr7_4:38207400-38207419 | None:intergenic | 20.0% |
!! | ATGTTAAAAAAGATACTAGA+GGG | - | chr7_4:38207449-38207468 | None:intergenic | 20.0% |
!! | AATGTTAAAAAAGATACTAG+AGG | - | chr7_4:38207450-38207469 | None:intergenic | 20.0% |
!! | CATCATTGCATAAAAAATTT+AGG | - | chr7_4:38208111-38208130 | None:intergenic | 20.0% |
!! | GAAAATTGTCTTTCTATATA+TGG | - | chr7_4:38208306-38208325 | None:intergenic | 20.0% |
!!! | ACCTTTTGACATTATAAATA+GGG | + | chr7_4:38208447-38208466 | Msa1152510:intron | 20.0% |
!!! | TTCATAGATTTTTGATTTTG+AGG | - | chr7_4:38208986-38209005 | None:intergenic | 20.0% |
!! | AATCAAAAATCTATGAAAAG+AGG | + | chr7_4:38208989-38209008 | Msa1152510:CDS | 20.0% |
!! | ATCAAAAATCTATGAAAAGA+GGG | + | chr7_4:38208990-38209009 | Msa1152510:CDS | 20.0% |
!! | TAATCTATTAACTTAATCTG+GGG | + | chr7_4:38209058-38209077 | Msa1152510:intron | 20.0% |
!! | AAAGAAAAGGATAATAAAAG+TGG | + | chr7_4:38209345-38209364 | Msa1152510:CDS | 20.0% |
!!! | TCTAGTTTATGAATTTTAGA+TGG | + | chr7_4:38209761-38209780 | Msa1152510:intron | 20.0% |
!!! | CTAGTTTATGAATTTTAGAT+GGG | + | chr7_4:38209762-38209781 | Msa1152510:intron | 20.0% |
!!! | TAGTTTATGAATTTTAGATG+GGG | + | chr7_4:38209763-38209782 | Msa1152510:intron | 20.0% |
!! | ATTTCAGAATATAGAATTGA+TGG | + | chr7_4:38210540-38210559 | Msa1152510:CDS | 20.0% |
!!! | TACATGGAATCAAATATTTT+TGG | + | chr7_4:38210671-38210690 | Msa1152510:CDS | 20.0% |
! | CATGTAGAATATTTATCATG+TGG | - | chr7_4:38207401-38207420 | None:intergenic | 25.0% |
!! | TTAAAGCATAGTATGTGTTT+TGG | - | chr7_4:38207486-38207505 | None:intergenic | 25.0% |
! | AAGGAATTAGAATGAATTAG+TGG | - | chr7_4:38207594-38207613 | None:intergenic | 25.0% |
!! | CAAATAGAGATGATAATGAT+AGG | - | chr7_4:38207700-38207719 | None:intergenic | 25.0% |
! | ATCTCTGAATTATTGAATGT+CGG | + | chr7_4:38208055-38208074 | Msa1152510:intron | 25.0% |
! | AGATTCTGATTATCAACATT+GGG | + | chr7_4:38208347-38208366 | Msa1152510:CDS | 25.0% |
! | GAAATCACAATTAACATGTT+TGG | - | chr7_4:38208418-38208437 | None:intergenic | 25.0% |
!! | CACCTTTTGACATTATAAAT+AGG | + | chr7_4:38208446-38208465 | Msa1152510:intron | 25.0% |
! | ACCCTATTTATAATGTCAAA+AGG | - | chr7_4:38208451-38208470 | None:intergenic | 25.0% |
! | CAAAGAATCTTCAAATTACA+GGG | - | chr7_4:38208549-38208568 | None:intergenic | 25.0% |
! | TGGAAATCACTAATATTACA+TGG | + | chr7_4:38208756-38208775 | Msa1152510:intron | 25.0% |
! | ATTCACTTCAAAGAAATCAA+TGG | + | chr7_4:38208927-38208946 | Msa1152510:CDS | 25.0% |
! | TTCACTTCAAAGAAATCAAT+GGG | + | chr7_4:38208928-38208947 | Msa1152510:CDS | 25.0% |
! | TCAAAAATCTATGAAAAGAG+GGG | + | chr7_4:38208991-38209010 | Msa1152510:CDS | 25.0% |
! | ATAGTGCTAATATAGATACT+TGG | + | chr7_4:38209226-38209245 | Msa1152510:intron | 25.0% |
!!! | ATACATAGGTATTGAAAACA+AGG | - | chr7_4:38209414-38209433 | None:intergenic | 25.0% |
!! | TTGTTTTCAATACCTATGTA+TGG | + | chr7_4:38209413-38209432 | Msa1152510:CDS | 25.0% |
! | CATATTTCACTGCAATATAA+CGG | - | chr7_4:38209569-38209588 | None:intergenic | 25.0% |
!!! | TTCATCATGGTTTTAAATTG+CGG | - | chr7_4:38209672-38209691 | None:intergenic | 25.0% |
! | TCATTGTTGAATATTCATCA+TGG | - | chr7_4:38209685-38209704 | None:intergenic | 25.0% |
!! | AGAAATCATTTTCATCACTT+TGG | - | chr7_4:38209737-38209756 | None:intergenic | 25.0% |
! | TATCAATCCAAACAAAACAA+GGG | + | chr7_4:38209882-38209901 | Msa1152510:CDS | 25.0% |
!!! | GTCTATTTTTTGTAATGAGT+AGG | + | chr7_4:38210060-38210079 | Msa1152510:intron | 25.0% |
! | AAATAAAAAATTCGAGCGAT+TGG | - | chr7_4:38210164-38210183 | None:intergenic | 25.0% |
! | AAAGCAGAAAATTTCTTACA+AGG | + | chr7_4:38210231-38210250 | Msa1152510:intron | 25.0% |
! | AATATTTGATTCCATGTATC+TGG | - | chr7_4:38210669-38210688 | None:intergenic | 25.0% |
!! | AATTTTTACTTGCAAAACCA+AGG | + | chr7_4:38210837-38210856 | Msa1152510:three_prime_UTR | 25.0% |
!! | ATTTTTACTTGCAAAACCAA+GGG | + | chr7_4:38210838-38210857 | Msa1152510:three_prime_UTR | 25.0% |
TTAATATACATCACCAAGCA+AGG | - | chr7_4:38207267-38207286 | None:intergenic | 30.0% | |
!!! | GGTTTTATGCATTTTTGAGT+AGG | - | chr7_4:38207516-38207535 | None:intergenic | 30.0% |
AAAAAAGGTTTAGAGAGGTA+AGG | - | chr7_4:38207537-38207556 | None:intergenic | 30.0% | |
TGAAGACATTGCACAAAAAA+AGG | - | chr7_4:38207552-38207571 | None:intergenic | 30.0% | |
GAATAAGCTTAATAGTGAGA+AGG | - | chr7_4:38207613-38207632 | None:intergenic | 30.0% | |
! | GGATTTTCATTATTCCAGAA+GGG | - | chr7_4:38207657-38207676 | None:intergenic | 30.0% |
! | TGGATTTTCATTATTCCAGA+AGG | - | chr7_4:38207658-38207677 | None:intergenic | 30.0% |
GGAATAATGAAAATCCATAG+AGG | + | chr7_4:38207661-38207680 | Msa1152510:CDS | 30.0% | |
! | GAGATGATAATGATAGGAAA+AGG | - | chr7_4:38207694-38207713 | None:intergenic | 30.0% |
ACAAGGTTTGAACTTGAAAA+TGG | - | chr7_4:38207782-38207801 | None:intergenic | 30.0% | |
!! | AGACTTACTTGATTTTAGTC+TGG | - | chr7_4:38207818-38207837 | None:intergenic | 30.0% |
CGAAAATGAAGATATAGTTG+TGG | - | chr7_4:38207854-38207873 | None:intergenic | 30.0% | |
AACTACTTCGAATGAAAAGT+TGG | + | chr7_4:38207993-38208012 | Msa1152510:intron | 30.0% | |
! | TTTTTACGATCCGTATCAAA+TGG | + | chr7_4:38208083-38208102 | Msa1152510:intron | 30.0% |
! | AATTTAGGGTCCATTTGATA+CGG | - | chr7_4:38208096-38208115 | None:intergenic | 30.0% |
!! | AGATGATAAGAAAGTTGATG+AGG | + | chr7_4:38208158-38208177 | Msa1152510:intron | 30.0% |
!! | TGTAGATTGGCTTTATTGAT+TGG | - | chr7_4:38208269-38208288 | None:intergenic | 30.0% |
CAGATTCTGATTATCAACAT+TGG | + | chr7_4:38208346-38208365 | Msa1152510:CDS | 30.0% | |
GAAATTGCTAATATTGAAGG+GGG | - | chr7_4:38208487-38208506 | None:intergenic | 30.0% | |
GGAAATTGCTAATATTGAAG+GGG | - | chr7_4:38208488-38208507 | None:intergenic | 30.0% | |
CGGAAATTGCTAATATTGAA+GGG | - | chr7_4:38208489-38208508 | None:intergenic | 30.0% | |
CCTTCAATATTAGCAATTTC+CGG | + | chr7_4:38208487-38208506 | Msa1152510:intron | 30.0% | |
!!! | ATTTTTTACAGAGGGTAAAC+CGG | - | chr7_4:38208509-38208528 | None:intergenic | 30.0% |
CCAAAGAATCTTCAAATTAC+AGG | - | chr7_4:38208550-38208569 | None:intergenic | 30.0% | |
CCTGTAATTTGAAGATTCTT+TGG | + | chr7_4:38208547-38208566 | Msa1152510:intron | 30.0% | |
ACAAAATCGATGATATGACA+TGG | + | chr7_4:38208594-38208613 | Msa1152510:intron | 30.0% | |
CAAAATCGATGATATGACAT+GGG | + | chr7_4:38208595-38208614 | Msa1152510:intron | 30.0% | |
AAAATCGATGATATGACATG+GGG | + | chr7_4:38208596-38208615 | Msa1152510:intron | 30.0% | |
CTTGTAGTTTGAAGATTCTT+TGG | - | chr7_4:38208698-38208717 | None:intergenic | 30.0% | |
CAAAGAATCTTCAAACTACA+AGG | + | chr7_4:38208696-38208715 | Msa1152510:intron | 30.0% | |
! | TTAGCTCTCAAAAAACTTCA+AGG | + | chr7_4:38208881-38208900 | Msa1152510:CDS | 30.0% |
TAGCTCTCAAAAAACTTCAA+GGG | + | chr7_4:38208882-38208901 | Msa1152510:CDS | 30.0% | |
GGAAAAGACTACTATTTGTA+GGG | + | chr7_4:38208903-38208922 | Msa1152510:CDS | 30.0% | |
GAAAAGACTACTATTTGTAG+GGG | + | chr7_4:38208904-38208923 | Msa1152510:CDS | 30.0% | |
! | ATGGGAATCTTTTGTATGTT+TGG | + | chr7_4:38208946-38208965 | Msa1152510:CDS | 30.0% |
! | CTTTTGTATGTTTGGTAGAA+TGG | + | chr7_4:38208954-38208973 | Msa1152510:CDS | 30.0% |
!! | TTAAGCCTTGTTTGGATAAA+CGG | - | chr7_4:38209152-38209171 | None:intergenic | 30.0% |
!! | GAATTTGTTTAAGCCTTGTT+TGG | - | chr7_4:38209160-38209179 | None:intergenic | 30.0% |
ATGCTAGTATAGAATTCTAC+TGG | + | chr7_4:38209272-38209291 | Msa1152510:CDS | 30.0% | |
TGCTAGTATAGAATTCTACT+GGG | + | chr7_4:38209273-38209292 | Msa1152510:CDS | 30.0% | |
AACACTGACATACATTTCAT+TGG | + | chr7_4:38209316-38209335 | Msa1152510:CDS | 30.0% | |
TCATTGGAGATACAAAGAAA+AGG | + | chr7_4:38209332-38209351 | Msa1152510:CDS | 30.0% | |
TCAAAGAGAGAGCAAAAAAT+TGG | + | chr7_4:38209374-38209393 | Msa1152510:CDS | 30.0% | |
! | TTTTCAATACCTATGTATGG+TGG | + | chr7_4:38209416-38209435 | Msa1152510:CDS | 30.0% |
! | TCATTTAGCAATGGATTTGA+AGG | + | chr7_4:38209787-38209806 | Msa1152510:CDS | 30.0% |
! | CATTTAGCAATGGATTTGAA+GGG | + | chr7_4:38209788-38209807 | Msa1152510:CDS | 30.0% |
CTATCAATCCAAACAAAACA+AGG | + | chr7_4:38209881-38209900 | Msa1152510:CDS | 30.0% | |
ATAGTTCTCAACAAATCTCT+AGG | - | chr7_4:38210307-38210326 | None:intergenic | 30.0% | |
AATTGTTAAGTGAAGAAGAG+AGG | + | chr7_4:38210595-38210614 | Msa1152510:CDS | 30.0% | |
AAAATGCAGATTGCATACAT+TGG | + | chr7_4:38210628-38210647 | Msa1152510:CDS | 30.0% | |
! | AGGGTAAGAATGAGTTGAAA+GGG | - | chr7_4:38207430-38207449 | None:intergenic | 35.0% |
GCACAAAAAAAGGTTTAGAG+AGG | - | chr7_4:38207542-38207561 | None:intergenic | 35.0% | |
!!! | GAAAAGGCATTTTTCCTCTA+TGG | - | chr7_4:38207678-38207697 | None:intergenic | 35.0% |
TTTAGTCTGGTGTTCTTTCT+AGG | - | chr7_4:38207805-38207824 | None:intergenic | 35.0% | |
CAACTTTCTTATCATCTGCT+AGG | - | chr7_4:38208155-38208174 | None:intergenic | 35.0% | |
AGGAGATTGTAAATGCAACA+TGG | + | chr7_4:38208178-38208197 | Msa1152510:CDS | 35.0% | |
CAACATTGCCAATGGAAAAT+GGG | + | chr7_4:38208236-38208255 | Msa1152510:CDS | 35.0% | |
! | GTTGAAAACCCATTTTCCAT+TGG | - | chr7_4:38208247-38208266 | None:intergenic | 35.0% |
CAAGTTATGTCAGTGTAGAT+TGG | - | chr7_4:38208282-38208301 | None:intergenic | 35.0% | |
! | CAATTAACATGTTTGGAGTG+TGG | - | chr7_4:38208411-38208430 | None:intergenic | 35.0% |
CCGGAAATTGCTAATATTGA+AGG | - | chr7_4:38208490-38208509 | None:intergenic | 35.0% | |
GAATCTTCAAATTACAGGGT+TGG | - | chr7_4:38208545-38208564 | None:intergenic | 35.0% | |
!! | TCACCTTCATGAATTTTGAC+TGG | + | chr7_4:38208571-38208590 | Msa1152510:intron | 35.0% |
TGTCCAGTCAAAATTCATGA+AGG | - | chr7_4:38208577-38208596 | None:intergenic | 35.0% | |
!!! | AGTTTTTTGAGAGCTAACAC+TGG | - | chr7_4:38208878-38208897 | None:intergenic | 35.0% |
GGGAAAAGACTACTATTTGT+AGG | + | chr7_4:38208902-38208921 | Msa1152510:CDS | 35.0% | |
TCATTCAGTCTTCAAAGTCA+AGG | + | chr7_4:38209018-38209037 | Msa1152510:CDS | 35.0% | |
TTTAGCCGTTTATCCAAACA+AGG | + | chr7_4:38209144-38209163 | Msa1152510:intron | 35.0% | |
TGTCAATGTAGCCACAATTA+CGG | + | chr7_4:38209598-38209617 | Msa1152510:intron | 35.0% | |
! | AAAGCTAACTTGTATGCTAC+TGG | - | chr7_4:38209832-38209851 | None:intergenic | 35.0% |
!! | ACAAGTTAGCTTTGAAGACT+TGG | + | chr7_4:38209839-38209858 | Msa1152510:CDS | 35.0% |
!! | CAAGTTAGCTTTGAAGACTT+GGG | + | chr7_4:38209840-38209859 | Msa1152510:CDS | 35.0% |
TTTGAAGACTTGGGCTAATT+GGG | + | chr7_4:38209849-38209868 | Msa1152510:CDS | 35.0% | |
!!! | AAGAAGACCCTTGTTTTGTT+TGG | - | chr7_4:38209892-38209911 | None:intergenic | 35.0% |
TTAGGTCTAATGCAAGTGAT+TGG | - | chr7_4:38210134-38210153 | None:intergenic | 35.0% | |
ATTTACCAGAAGCCAAGATT+GGG | + | chr7_4:38210365-38210384 | Msa1152510:intron | 35.0% | |
!! | AGTGAGGAAAAAGAAGCATT+GGG | + | chr7_4:38210428-38210447 | Msa1152510:CDS | 35.0% |
GGATAAACGTATAATGAGTG+TGG | + | chr7_4:38210461-38210480 | Msa1152510:CDS | 35.0% | |
GTTACATTGATGAATGTCAC+TGG | - | chr7_4:38210516-38210535 | None:intergenic | 35.0% | |
TCCTCAGTGTATACTGAAAA+TGG | + | chr7_4:38210567-38210586 | Msa1152510:CDS | 35.0% | |
! | TCCATTTTCAGTATACACTG+AGG | - | chr7_4:38210571-38210590 | None:intergenic | 35.0% |
TCAGTGTATACTGAAAATGG+AGG | + | chr7_4:38210570-38210589 | Msa1152510:CDS | 35.0% | |
CAGTGTATACTGAAAATGGA+GGG | + | chr7_4:38210571-38210590 | Msa1152510:CDS | 35.0% | |
! | TGTATGCAATCTGCATTTTG+TGG | - | chr7_4:38210627-38210646 | None:intergenic | 35.0% |
ATACATCACCAAGCAAGGTA+TGG | - | chr7_4:38207262-38207281 | None:intergenic | 40.0% | |
! | GAGGGTAAGAATGAGTTGAA+AGG | - | chr7_4:38207431-38207450 | None:intergenic | 40.0% |
TTATTCCAGAAGGGATCATG+AGG | - | chr7_4:38207648-38207667 | None:intergenic | 40.0% | |
! | CGCATGTTACTTGACTCTAA+AGG | + | chr7_4:38207872-38207891 | Msa1152510:intron | 40.0% |
! | ATGCAACATGGATTGATGAC+AGG | + | chr7_4:38208190-38208209 | Msa1152510:CDS | 40.0% |
GAAGAATGCAACATTGCCAA+TGG | + | chr7_4:38208228-38208247 | Msa1152510:CDS | 40.0% | |
GCAACATTGCCAATGGAAAA+TGG | + | chr7_4:38208235-38208254 | Msa1152510:CDS | 40.0% | |
CTGATTATCAACATTGGGAG+TGG | + | chr7_4:38208352-38208371 | Msa1152510:CDS | 40.0% | |
CCTGTAATTGGCGAGAATTT+CGG | - | chr7_4:38208626-38208645 | None:intergenic | 40.0% | |
CGAAATTCTCGCCAATTACA+GGG | + | chr7_4:38208624-38208643 | Msa1152510:intron | 40.0% | |
GAAATTCTCGCCAATTACAG+GGG | + | chr7_4:38208625-38208644 | Msa1152510:intron | 40.0% | |
AAATTCTCGCCAATTACAGG+GGG | + | chr7_4:38208626-38208645 | Msa1152510:intron | 40.0% | |
ACTTGGATGTGTTGTAACAC+AGG | + | chr7_4:38209243-38209262 | Msa1152510:intron | 40.0% | |
TGTTAGACTCAACCAGGTAT+GGG | - | chr7_4:38209300-38209319 | None:intergenic | 40.0% | |
GAGAGAGCAAAAAATTGGAC+AGG | + | chr7_4:38209379-38209398 | Msa1152510:CDS | 40.0% | |
AGCAAAAAATTGGACAGGAG+TGG | + | chr7_4:38209384-38209403 | Msa1152510:CDS | 40.0% | |
CAACAGTAGCCACCATATAA+CGG | - | chr7_4:38209632-38209651 | None:intergenic | 40.0% | |
ACTGTTGTCTGTTGTGATTG+TGG | + | chr7_4:38209645-38209664 | Msa1152510:intron | 40.0% | |
AGATGGGGTTCATTTAGCAA+TGG | + | chr7_4:38209778-38209797 | Msa1152510:intron | 40.0% | |
! | CTTTGAAGACTTGGGCTAAT+TGG | + | chr7_4:38209848-38209867 | Msa1152510:CDS | 40.0% |
CATTTACCAGAAGCCAAGAT+TGG | + | chr7_4:38210364-38210383 | Msa1152510:intron | 40.0% | |
TTTACCAGAAGCCAAGATTG+GGG | + | chr7_4:38210366-38210385 | Msa1152510:intron | 40.0% | |
! | CAATGCTTCTTTTTCCTCAC+TGG | - | chr7_4:38210429-38210448 | None:intergenic | 40.0% |
! | CAGTGAGGAAAAAGAAGCAT+TGG | + | chr7_4:38210427-38210446 | Msa1152510:CDS | 40.0% |
!! | GTGAGGAAAAAGAAGCATTG+GGG | + | chr7_4:38210429-38210448 | Msa1152510:CDS | 40.0% |
!! | AAAAAGAAGCATTGGGGAAC+TGG | + | chr7_4:38210435-38210454 | Msa1152510:CDS | 40.0% |
AAGCGAGCAAAATTAACCCT+TGG | - | chr7_4:38210857-38210876 | None:intergenic | 40.0% | |
TTTGTGAGCCATACCTTGCT+TGG | + | chr7_4:38207251-38207270 | Msa1152510:five_prime_UTR | 45.0% | |
!! | CTGGTGTTCTTTCTAGGACA+AGG | - | chr7_4:38207799-38207818 | None:intergenic | 45.0% |
TTGGAGTGTGGAACTTACCT+TGG | - | chr7_4:38208399-38208418 | None:intergenic | 45.0% | |
CCGAAATTCTCGCCAATTAC+AGG | + | chr7_4:38208623-38208642 | Msa1152510:intron | 45.0% | |
GTTAGACTCAACCAGGTATG+GGG | - | chr7_4:38209299-38209318 | None:intergenic | 45.0% | |
GTGTTAGACTCAACCAGGTA+TGG | - | chr7_4:38209301-38209320 | None:intergenic | 45.0% | |
TGTCAGTGTTAGACTCAACC+AGG | - | chr7_4:38209306-38209325 | None:intergenic | 45.0% | |
!! | ACCTATGTATGGTGGATGAG+TGG | + | chr7_4:38209424-38209443 | Msa1152510:CDS | 45.0% |
ACCACTCATCCACCATACAT+AGG | - | chr7_4:38209428-38209447 | None:intergenic | 45.0% | |
!! | TATGGTGGATGAGTGGTTCT+AGG | + | chr7_4:38209431-38209450 | Msa1152510:CDS | 45.0% |
ACGGTTGTGAAGCCGTTATA+TGG | + | chr7_4:38209617-38209636 | Msa1152510:intron | 45.0% | |
GTTGTGAAGCCGTTATATGG+TGG | + | chr7_4:38209620-38209639 | Msa1152510:intron | 45.0% | |
CAATGTCACCAACACACACA+AGG | + | chr7_4:38209917-38209936 | Msa1152510:CDS | 45.0% | |
GAGAAAGACCTTGTGTGTGT+TGG | - | chr7_4:38209928-38209947 | None:intergenic | 45.0% | |
CTTTCATGTTGCCCCAATCT+TGG | - | chr7_4:38210380-38210399 | None:intergenic | 45.0% | |
TCAATGAGACAAAGCCAGTG+AGG | + | chr7_4:38210412-38210431 | Msa1152510:CDS | 45.0% | |
! | TGCATACATTGGTGTTTGCC+TGG | + | chr7_4:38210639-38210658 | Msa1152510:CDS | 45.0% |
! | TTCCATGTATCTGGAACACC+AGG | - | chr7_4:38210660-38210679 | None:intergenic | 45.0% |
CCAGAAGGGATCATGAGGAA+AGG | - | chr7_4:38207643-38207662 | None:intergenic | 50.0% | |
CCTTTCCTCATGATCCCTTC+TGG | + | chr7_4:38207640-38207659 | Msa1152510:exon | 50.0% | |
CTTGGCAAGGTGCAATCTTC+TGG | - | chr7_4:38208381-38208400 | None:intergenic | 50.0% | |
CAGAAGATTGCACCTTGCCA+AGG | + | chr7_4:38208379-38208398 | Msa1152510:CDS | 50.0% | |
GTGTGGAACTTACCTTGGCA+AGG | - | chr7_4:38208394-38208413 | None:intergenic | 50.0% | |
GTACTTTCGCCCCCTGTAAT+TGG | - | chr7_4:38208638-38208657 | None:intergenic | 50.0% | |
CGGCTTCACAACCGTAATTG+TGG | - | chr7_4:38209612-38209631 | None:intergenic | 50.0% | |
!! | GAAGCATTGGGGAACTGGTT+CGG | + | chr7_4:38210440-38210459 | Msa1152510:CDS | 50.0% |
TGCCTGGTGTTCCAGATACA+TGG | + | chr7_4:38210655-38210674 | Msa1152510:CDS | 50.0% | |
ATTCTACTGGGCCCCATACC+TGG | + | chr7_4:38209285-38209304 | Msa1152510:CDS | 55.0% | |
CGAGCGATTGGTGCGCAATT+AGG | - | chr7_4:38210152-38210171 | None:intergenic | 55.0% | |
GTTGCCCCAATCTTGGCTTC+TGG | - | chr7_4:38210373-38210392 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 38207230 | 38210921 | 38207230 | ID=Msa1152510;Name=Msa1152510 |
chr7_4 | mRNA | 38207230 | 38210921 | 38207230 | ID=Msa1152510-mRNA-1;Parent=Msa1152510;Name=Msa1152510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=419|1|1|1|1|1|6|217|427 |
chr7_4 | exon | 38207230 | 38207829 | 38207230 | ID=Msa1152510-mRNA-1:exon:9129;Parent=Msa1152510-mRNA-1 |
chr7_4 | exon | 38208160 | 38208400 | 38208160 | ID=Msa1152510-mRNA-1:exon:9130;Parent=Msa1152510-mRNA-1 |
chr7_4 | exon | 38208868 | 38209039 | 38208868 | ID=Msa1152510-mRNA-1:exon:9131;Parent=Msa1152510-mRNA-1 |
chr7_4 | exon | 38209265 | 38209464 | 38209265 | ID=Msa1152510-mRNA-1:exon:9132;Parent=Msa1152510-mRNA-1 |
chr7_4 | exon | 38209780 | 38209938 | 38209780 | ID=Msa1152510-mRNA-1:exon:9133;Parent=Msa1152510-mRNA-1 |
chr7_4 | exon | 38210374 | 38210921 | 38210374 | ID=Msa1152510-mRNA-1:exon:9134;Parent=Msa1152510-mRNA-1 |
chr7_4 | five_prime_UTR | 38207230 | 38207648 | 38207230 | ID=Msa1152510-mRNA-1:five_prime_utr;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38207649 | 38207829 | 38207649 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38208160 | 38208400 | 38208160 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38208868 | 38209039 | 38208868 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38209265 | 38209464 | 38209265 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38209780 | 38209938 | 38209780 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | CDS | 38210374 | 38210704 | 38210374 | ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1 |
chr7_4 | three_prime_UTR | 38210705 | 38210921 | 38210705 | ID=Msa1152510-mRNA-1:three_prime_utr;Parent=Msa1152510-mRNA-1 |
Gene Sequence |
Protein sequence |