AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1152510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152510 MtrunA17_Chr7g0242701 97.892 427 9 0 1 427 1 427 0.0 870
Msa1152510 MtrunA17_Chr4g0006991 78.220 427 93 0 1 427 1 427 0.0 703
Msa1152510 MtrunA17_Chr8g0360521 45.278 413 206 5 16 427 16 409 2.32e-129 379
Msa1152510 MtrunA17_Chr5g0437601 42.254 426 234 6 3 427 10 424 8.84e-129 378
Msa1152510 MtrunA17_Chr3g0113671 47.688 346 179 2 84 427 104 449 2.47e-125 370
Msa1152510 MtrunA17_Chr3g0114101 40.000 425 254 1 3 427 7 430 1.52e-119 355
Msa1152510 MtrunA17_Chr5g0437291 46.418 349 182 3 84 427 163 511 4.63e-119 356
Msa1152510 MtrunA17_Chr4g0005481 46.243 346 181 4 83 427 105 446 2.11e-110 332
Msa1152510 MtrunA17_Chr4g0005491 45.559 349 182 5 85 427 61 407 4.95e-110 330
Msa1152510 MtrunA17_Chr7g0243301 43.343 353 192 5 81 427 59 409 7.30e-108 324
Msa1152510 MtrunA17_Chr1g0210771 40.634 347 182 8 84 427 57 382 1.13e-89 276
Msa1152510 MtrunA17_Chr1g0171171 39.655 348 185 8 83 427 50 375 3.63e-86 267
Msa1152510 MtrunA17_Chr3g0105301 38.150 346 198 6 86 427 43 376 3.54e-85 265
Msa1152510 MtrunA17_Chr5g0430371 37.883 359 197 10 82 427 54 399 6.12e-82 257
Msa1152510 MtrunA17_Chr3g0097891 36.599 347 198 6 81 427 26 350 1.86e-81 254
Msa1152510 MtrunA17_Chr5g0413271 37.197 371 211 10 64 427 121 476 3.51e-78 250
Msa1152510 MtrunA17_Chr7g0269991 36.390 349 197 9 86 427 137 467 1.60e-75 243
Msa1152510 MtrunA17_Chr4g0041011 36.550 342 192 7 86 427 47 363 4.46e-75 238
Msa1152510 MtrunA17_Chr7g0258851 36.752 351 204 8 85 427 247 587 1.09e-74 244
Msa1152510 MtrunA17_Chr1g0175671 37.322 351 202 9 85 427 169 509 3.26e-74 241
Msa1152510 MtrunA17_Chr4g0071391 35.613 351 208 7 84 427 107 446 5.78e-74 238
Msa1152510 MtrunA17_Chr5g0413851 38.304 342 187 9 86 427 42 359 3.05e-73 234
Msa1152510 MtrunA17_Chr2g0314801 36.127 346 198 7 83 427 30 353 3.93e-73 233
Msa1152510 MtrunA17_Chr2g0325481 35.652 345 197 8 83 427 47 366 5.62e-73 233
Msa1152510 MtrunA17_Chr4g0045941 35.362 345 199 7 83 427 30 350 1.43e-72 231
Msa1152510 MtrunA17_Chr4g0068111 33.242 364 224 6 71 427 102 453 7.72e-72 233
Msa1152510 MtrunA17_Chr1g0213281 32.432 407 240 11 32 427 133 515 1.68e-71 234
Msa1152510 MtrunA17_Chr2g0287901 37.534 365 195 10 79 427 90 437 2.70e-71 231
Msa1152510 MtrunA17_Chr4g0045951 35.965 342 195 7 86 427 45 362 3.34e-71 228
Msa1152510 MtrunA17_Chr2g0283581 35.072 345 199 8 83 427 39 358 5.84e-71 228
Msa1152510 MtrunA17_Chr3g0085071 35.429 350 194 10 82 427 42 363 5.09e-70 225
Msa1152510 MtrunA17_Chr3g0085081 34.857 350 196 10 82 427 27 348 6.38e-70 224
Msa1152510 MtrunA17_Chr2g0314791 35.429 350 189 9 84 427 27 345 1.73e-68 221
Msa1152510 MtrunA17_Chr3g0091031 34.286 350 198 10 82 427 27 348 2.09e-68 221
Msa1152510 MtrunA17_Chr8g0368461 35.165 364 205 9 84 427 176 528 1.99e-67 223
Msa1152510 MtrunA17_Chr3g0126021 31.308 428 248 10 19 427 59 459 1.28e-65 217
Msa1152510 MtrunA17_Chr7g0259711 32.033 359 216 8 83 427 88 432 5.84e-63 209
Msa1152510 MtrunA17_Chr8g0384151 31.909 351 210 6 84 427 88 416 1.22e-62 208
Msa1152510 MtrunA17_Chr1g0209921 37.553 237 136 6 83 317 41 267 5.75e-50 170
Msa1152510 MtrunA17_Chr1g0178081 31.880 367 149 14 84 427 53 341 1.60e-47 166
Msa1152510 MtrunA17_Chr8g0391481 30.685 365 215 14 84 427 25 372 1.13e-42 154
Msa1152510 MtrunA17_Chr5g0414091 31.117 376 207 15 81 427 79 431 4.65e-42 154
Msa1152510 MtrunA17_Chr5g0414051 28.906 384 215 15 75 427 64 420 4.15e-40 148
Msa1152510 MtrunA17_Chr5g0414061 30.447 358 222 13 85 427 93 438 5.87e-40 148
Msa1152510 MtrunA17_Chr7g0226991 28.676 408 237 17 53 427 16 402 1.41e-38 144
Msa1152510 MtrunA17_Chr8g0347321 26.744 430 269 14 28 427 26 439 4.35e-38 143
Msa1152510 MtrunA17_Chr8g0387921 25.293 427 278 12 20 427 15 419 5.00e-38 142
Msa1152510 MtrunA17_Chr6g0456691 28.211 436 249 18 18 427 22 419 8.15e-38 142
Msa1152510 MtrunA17_Chr3g0140371 29.891 368 207 14 86 427 18 360 8.60e-38 140
Msa1152510 MtrunA17_Chr5g0414041 30.939 362 225 14 81 427 82 433 3.23e-36 138
Msa1152510 MtrunA17_Chr6g0456681 30.194 361 223 12 83 427 61 408 6.94e-35 134
Msa1152510 MtrunA17_Chr2g0283851 29.223 373 204 15 87 427 56 400 9.14e-35 133
Msa1152510 MtrunA17_Chr6g0476041 25.243 412 262 15 40 427 125 514 2.80e-34 134
Msa1152510 MtrunA17_Chr1g0188191 25.479 365 232 14 86 427 234 581 1.89e-33 132
Msa1152510 MtrunA17_Chr8g0384421 25.737 373 219 14 83 427 130 472 3.13e-32 127
Msa1152510 MtrunA17_Chr4g0070341 27.322 366 216 13 86 427 132 471 1.04e-31 125
Msa1152510 MtrunA17_Chr4g0049421 26.975 367 221 15 86 427 48 392 2.66e-31 123
Msa1152510 MtrunA17_Chr6g0451321 25.348 359 242 10 82 427 112 457 3.31e-30 121
Msa1152510 MtrunA17_Chr6g0455901 26.446 363 233 12 84 427 69 416 2.55e-28 115
Msa1152510 MtrunA17_Chr7g0221271 31.818 220 117 6 7 213 6 205 6.57e-24 98.6
Msa1152510 MtrunA17_Chr7g0221291 34.302 172 106 5 7 178 6 170 1.09e-22 94.4
Msa1152510 MtrunA17_Chr2g0287931 34.921 126 75 1 146 264 1 126 1.94e-16 75.5
Msa1152510 MtrunA17_Chr3g0085101 34.906 106 61 2 284 386 6 106 1.42e-15 72.8
Msa1152510 MtrunA17_Chr1g0209931 35.294 102 50 2 326 427 7 92 6.55e-14 67.4
Msa1152510 MtrunA17_Chr5g0429211 41.096 73 43 0 142 214 195 267 1.58e-11 64.7
Msa1152510 MtrunA17_Chr5g0429191 54.167 48 17 2 374 420 2 45 5.40e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152510 AT5G01360.1 64.371 421 144 2 13 427 14 434 0.0 568
Msa1152510 AT5G01360.2 70.339 354 104 1 75 427 25 378 0.0 547
Msa1152510 AT1G73140.1 48.159 353 175 3 76 427 60 405 7.27e-126 370
Msa1152510 AT3G55990.1 47.486 358 186 2 68 423 122 479 1.69e-125 372
Msa1152510 AT2G40150.1 47.989 348 173 2 84 423 69 416 4.06e-123 364
Msa1152510 AT2G40320.1 39.416 411 239 1 17 427 22 422 3.92e-119 354
Msa1152510 AT3G11030.1 44.348 345 191 1 84 427 104 448 3.32e-115 345
Msa1152510 AT2G40160.2 44.126 349 190 5 84 427 75 423 2.01e-110 332
Msa1152510 AT2G40160.1 44.348 345 187 5 84 423 75 419 3.05e-110 331
Msa1152510 AT5G01620.2 40.399 401 216 9 36 427 63 449 8.22e-108 326
Msa1152510 AT5G01620.1 40.399 401 216 9 36 427 63 449 8.22e-108 326
Msa1152510 AT5G01620.3 43.678 348 190 5 82 427 114 457 3.41e-107 324
Msa1152510 AT2G38320.1 42.618 359 198 5 75 427 48 404 7.00e-105 317
Msa1152510 AT2G38320.2 43.750 320 172 5 114 427 4 321 1.69e-94 287
Msa1152510 AT5G58600.1 37.571 354 204 8 79 427 59 400 5.10e-84 263
Msa1152510 AT2G30900.1 40.290 345 181 9 86 427 43 365 6.71e-83 259
Msa1152510 AT3G54260.1 38.551 345 188 8 86 427 51 374 1.08e-81 256
Msa1152510 AT3G62390.1 37.784 352 196 9 84 427 136 472 4.43e-81 258
Msa1152510 AT1G78710.1 36.705 346 196 7 82 427 34 356 1.32e-79 250
Msa1152510 AT5G20590.1 36.676 349 204 6 86 427 141 479 4.29e-78 250
Msa1152510 AT3G12060.1 35.248 383 218 8 52 427 176 535 1.00e-77 251
Msa1152510 AT5G06700.1 37.429 350 201 8 86 427 255 594 5.20e-77 251
Msa1152510 AT2G34070.1 34.493 345 203 5 83 427 62 383 1.09e-76 244
Msa1152510 AT2G42570.1 34.571 350 205 8 78 427 39 364 2.34e-76 242
Msa1152510 AT2G31110.2 34.985 343 199 8 85 427 44 362 4.70e-76 241
Msa1152510 AT5G49340.1 38.136 354 195 10 86 427 100 441 8.84e-76 243
Msa1152510 AT1G29050.1 34.493 345 202 6 83 427 58 378 1.75e-74 238
Msa1152510 AT3G14850.2 35.484 341 199 6 83 423 31 350 1.55e-72 232
Msa1152510 AT2G40160.3 44.958 238 128 3 84 318 75 312 2.15e-72 230
Msa1152510 AT1G48880.1 35.795 352 191 9 85 427 114 439 1.36e-71 232
Msa1152510 AT2G30010.1 36.813 364 199 11 79 427 49 396 1.38e-71 231
Msa1152510 AT2G30010.2 36.813 364 199 11 79 427 92 439 3.49e-71 231
Msa1152510 AT1G60790.1 33.512 373 217 10 71 427 175 532 1.36e-67 224
Msa1152510 AT3G06080.2 35.211 355 205 9 86 427 103 445 1.44e-63 212
Msa1152510 AT5G19160.1 34.174 357 209 7 86 427 99 444 3.47e-62 208
Msa1152510 AT5G06230.2 33.884 363 206 10 83 427 18 364 4.65e-60 200
Msa1152510 AT5G06230.1 33.884 363 206 10 83 427 59 405 1.05e-59 200
Msa1152510 AT3G62390.2 37.860 243 140 4 84 319 136 374 1.02e-56 192
Msa1152510 AT1G78710.2 31.214 346 162 8 82 427 27 296 3.99e-55 185
Msa1152510 AT2G30900.2 42.035 226 120 6 86 309 43 259 6.54e-54 181
Msa1152510 AT5G58600.2 38.174 241 140 5 79 318 59 291 7.95e-54 181
Msa1152510 AT3G11570.1 32.258 341 196 9 103 427 98 419 3.81e-53 183
Msa1152510 AT2G31110.3 35.556 225 136 4 85 309 44 259 1.68e-51 174
Msa1152510 AT5G20590.2 36.667 240 143 3 86 318 141 378 4.90e-51 176
Msa1152510 AT2G34070.2 32.103 271 162 4 157 427 1 249 5.63e-51 172
Msa1152510 AT5G19160.2 37.083 240 142 3 86 318 99 336 6.36e-48 167
Msa1152510 AT3G14850.1 32.959 267 159 5 157 423 1 247 3.80e-47 162
Msa1152510 AT3G06080.1 37.759 241 139 5 86 318 103 340 3.28e-46 163
Msa1152510 AT1G70230.1 28.169 355 228 9 82 427 75 411 7.86e-41 150
Msa1152510 AT5G64020.1 28.997 369 218 16 86 427 57 408 7.95e-41 150
Msa1152510 AT2G31110.1 33.621 232 131 7 196 427 6 214 5.79e-39 140
Msa1152510 AT5G06230.3 32.669 251 150 5 83 318 59 305 1.27e-38 142
Msa1152510 AT1G01430.1 27.348 362 236 12 83 427 96 447 1.22e-36 139
Msa1152510 AT2G37720.1 27.957 372 216 15 81 427 138 482 1.92e-36 139
Msa1152510 AT2G14530.1 26.446 363 234 10 83 427 59 406 2.77e-36 138
Msa1152510 AT5G64470.3 27.401 354 231 13 86 427 55 394 6.89e-36 136
Msa1152510 AT5G15890.1 27.708 397 245 13 50 427 149 522 1.09e-34 135
Msa1152510 AT3G02440.1 27.978 361 222 13 86 427 127 468 4.84e-34 133
Msa1152510 AT3G02440.2 27.978 361 222 13 86 427 135 476 5.08e-34 133
Msa1152510 AT4G25360.1 26.171 363 236 12 85 427 174 524 1.00e-33 132
Msa1152510 AT4G25360.2 26.171 363 236 12 85 427 174 524 1.00e-33 132
Msa1152510 AT4G01080.1 24.432 352 244 10 83 424 88 427 4.35e-33 129
Msa1152510 AT5G64470.2 27.072 362 228 15 86 427 55 400 2.58e-32 127
Msa1152510 AT5G51640.1 26.076 395 241 16 59 427 119 488 7.43e-32 127
Msa1152510 AT5G20680.6 25.064 391 252 15 55 427 90 457 2.29e-31 125
Msa1152510 AT4G23790.1 26.400 375 229 14 80 427 73 427 3.05e-31 124
Msa1152510 AT5G20680.2 25.064 391 252 15 55 427 166 533 4.32e-31 125
Msa1152510 AT5G20680.4 25.064 391 252 15 55 427 184 551 4.55e-31 125
Msa1152510 AT5G20680.1 25.064 391 252 15 55 427 184 551 4.55e-31 125
Msa1152510 AT5G20680.3 25.064 391 252 15 55 427 184 551 4.55e-31 125
Msa1152510 AT5G20680.5 25.064 391 252 15 55 427 184 551 4.55e-31 125
Msa1152510 AT5G15900.1 27.596 366 222 15 84 427 65 409 6.88e-30 120
Msa1152510 AT5G15900.2 27.596 366 222 15 84 427 84 428 8.97e-30 120
Msa1152510 AT4G11090.1 25.333 375 231 14 80 427 73 425 2.56e-29 119
Msa1152510 AT3G28150.1 25.549 364 228 12 85 427 69 410 1.76e-26 110
Msa1152510 AT5G64470.4 27.509 269 177 11 86 343 55 316 1.29e-19 89.4
Msa1152510 AT5G64470.1 26.449 276 186 10 86 350 55 324 2.13e-19 89.0

Find 85 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAGACTTGGGCTAAT+TGG 0.164498 7_4:+38209848 Msa1152510:CDS
GAAAATTGTCTTTCTATATA+TGG 0.208909 7_4:-38208303 None:intergenic
GCAACATTGCCAATGGAAAA+TGG 0.220734 7_4:+38208235 Msa1152510:CDS
ACAAGGTTTGAACTTGAAAA+TGG 0.230325 7_4:-38207779 None:intergenic
AATATTTGATTCCATGTATC+TGG 0.237560 7_4:-38210666 None:intergenic
TCCTCAGTGTATACTGAAAA+TGG 0.241217 7_4:+38210567 Msa1152510:CDS
CTTGGCAAGGTGCAATCTTC+TGG 0.245799 7_4:-38208378 None:intergenic
TTTAGTCTGGTGTTCTTTCT+AGG 0.269729 7_4:-38207802 None:intergenic
CCTTTCCTCATGATCCCTTC+TGG 0.271041 7_4:+38207640 Msa1152510:exon
CTTTCATGTTGCCCCAATCT+TGG 0.282311 7_4:-38210377 None:intergenic
ATTTCAGAATATAGAATTGA+TGG 0.347402 7_4:+38210540 Msa1152510:CDS
AACACTGACATACATTTCAT+TGG 0.355620 7_4:+38209316 Msa1152510:CDS
TTTGAAGACTTGGGCTAATT+GGG 0.366796 7_4:+38209849 Msa1152510:CDS
TTAAAGCATAGTATGTGTTT+TGG 0.371629 7_4:-38207483 None:intergenic
CATTTACCAGAAGCCAAGAT+TGG 0.374143 7_4:+38210364 Msa1152510:intron
GGGAAAAGACTACTATTTGT+AGG 0.402810 7_4:+38208902 Msa1152510:CDS
ATGCTAGTATAGAATTCTAC+TGG 0.404319 7_4:+38209272 Msa1152510:CDS
ACAAGTTAGCTTTGAAGACT+TGG 0.409219 7_4:+38209839 Msa1152510:CDS
CAAATAGAGATGATAATGAT+AGG 0.414378 7_4:-38207697 None:intergenic
CAAGTTATGTCAGTGTAGAT+TGG 0.416949 7_4:-38208279 None:intergenic
CAACATTGCCAATGGAAAAT+GGG 0.423964 7_4:+38208236 Msa1152510:CDS
TATGGTGGATGAGTGGTTCT+AGG 0.424096 7_4:+38209431 Msa1152510:CDS
TGTAGATTGGCTTTATTGAT+TGG 0.426931 7_4:-38208266 None:intergenic
ATTTACCAGAAGCCAAGATT+GGG 0.436736 7_4:+38210365 Msa1152510:intron
TTCACTTCAAAGAAATCAAT+GGG 0.450238 7_4:+38208928 Msa1152510:CDS
TGCATACATTGGTGTTTGCC+TGG 0.450244 7_4:+38210639 Msa1152510:CDS
CTGGTGTTCTTTCTAGGACA+AGG 0.456429 7_4:-38207796 None:intergenic
AGATTCTGATTATCAACATT+GGG 0.458543 7_4:+38208347 Msa1152510:CDS
TCATTTAGCAATGGATTTGA+AGG 0.461734 7_4:+38209787 Msa1152510:CDS
ATTCACTTCAAAGAAATCAA+TGG 0.464902 7_4:+38208927 Msa1152510:CDS
GAAGCATTGGGGAACTGGTT+CGG 0.469422 7_4:+38210440 Msa1152510:CDS
AAAGAAAAGGATAATAAAAG+TGG 0.472940 7_4:+38209345 Msa1152510:CDS
ATTCTACTGGGCCCCATACC+TGG 0.476362 7_4:+38209285 Msa1152510:CDS
GTGTTAGACTCAACCAGGTA+TGG 0.478801 7_4:-38209298 None:intergenic
GGAAAAGACTACTATTTGTA+GGG 0.479501 7_4:+38208903 Msa1152510:CDS
AGGGTAAGAATGAGTTGAAA+GGG 0.481191 7_4:-38207427 None:intergenic
GAGATGATAATGATAGGAAA+AGG 0.487294 7_4:-38207691 None:intergenic
AAGGAATTAGAATGAATTAG+TGG 0.487663 7_4:-38207591 None:intergenic
AAAGCTAACTTGTATGCTAC+TGG 0.494526 7_4:-38209829 None:intergenic
CAGATTCTGATTATCAACAT+TGG 0.499692 7_4:+38208346 Msa1152510:CDS
TGTTAGACTCAACCAGGTAT+GGG 0.502247 7_4:-38209297 None:intergenic
CTATCAATCCAAACAAAACA+AGG 0.508070 7_4:+38209881 Msa1152510:CDS
TGCCTGGTGTTCCAGATACA+TGG 0.510835 7_4:+38210655 Msa1152510:CDS
GAGGGTAAGAATGAGTTGAA+AGG 0.515198 7_4:-38207428 None:intergenic
CAAGTTAGCTTTGAAGACTT+GGG 0.522945 7_4:+38209840 Msa1152510:CDS
CTGATTATCAACATTGGGAG+TGG 0.526215 7_4:+38208352 Msa1152510:CDS
AAGCGAGCAAAATTAACCCT+TGG 0.526936 7_4:-38210854 None:intergenic
TTTGTGAGCCATACCTTGCT+TGG 0.533318 7_4:+38207251 Msa1152510:five_prime_UTR
TTAATATACATCACCAAGCA+AGG 0.536471 7_4:-38207264 None:intergenic
ATGCAACATGGATTGATGAC+AGG 0.540613 7_4:+38208190 Msa1152510:CDS
CATTTAGCAATGGATTTGAA+GGG 0.555614 7_4:+38209788 Msa1152510:CDS
AGATGATAAGAAAGTTGATG+AGG 0.555639 7_4:+38208158 Msa1152510:intron
GTTACATTGATGAATGTCAC+TGG 0.556231 7_4:-38210513 None:intergenic
TCATTGGAGATACAAAGAAA+AGG 0.557285 7_4:+38209332 Msa1152510:CDS
ATACATCACCAAGCAAGGTA+TGG 0.561071 7_4:-38207259 None:intergenic
CATGTAGAATATTTATCATG+TGG 0.564503 7_4:-38207398 None:intergenic
GAATAAGCTTAATAGTGAGA+AGG 0.567781 7_4:-38207610 None:intergenic
TCATTCAGTCTTCAAAGTCA+AGG 0.570752 7_4:+38209018 Msa1152510:CDS
AATTGTTAAGTGAAGAAGAG+AGG 0.575802 7_4:+38210595 Msa1152510:CDS
AGATGGGGTTCATTTAGCAA+TGG 0.578823 7_4:+38209778 Msa1152510:intron
GAAGAATGCAACATTGCCAA+TGG 0.580954 7_4:+38208228 Msa1152510:CDS
TTCCATGTATCTGGAACACC+AGG 0.581846 7_4:-38210657 None:intergenic
ATGTAGAATATTTATCATGT+GGG 0.583411 7_4:-38207397 None:intergenic
GGAATAATGAAAATCCATAG+AGG 0.592887 7_4:+38207661 Msa1152510:CDS
CAGAAGATTGCACCTTGCCA+AGG 0.601981 7_4:+38208379 Msa1152510:CDS
GAAAAGACTACTATTTGTAG+GGG 0.609179 7_4:+38208904 Msa1152510:CDS
GAGAAAGACCTTGTGTGTGT+TGG 0.609531 7_4:-38209925 None:intergenic
CAGTGTATACTGAAAATGGA+GGG 0.619439 7_4:+38210571 Msa1152510:CDS
TTTACCAGAAGCCAAGATTG+GGG 0.623905 7_4:+38210366 Msa1152510:intron
CCAGAAGGGATCATGAGGAA+AGG 0.626313 7_4:-38207640 None:intergenic
CAATGTCACCAACACACACA+AGG 0.632942 7_4:+38209917 Msa1152510:CDS
AAAATGCAGATTGCATACAT+TGG 0.635099 7_4:+38210628 Msa1152510:CDS
GTTAGACTCAACCAGGTATG+GGG 0.635629 7_4:-38209296 None:intergenic
ACCACTCATCCACCATACAT+AGG 0.637859 7_4:-38209425 None:intergenic
TGTCAGTGTTAGACTCAACC+AGG 0.641142 7_4:-38209303 None:intergenic
ATACATAGGTATTGAAAACA+AGG 0.643617 7_4:-38209411 None:intergenic
TGCTAGTATAGAATTCTACT+GGG 0.645271 7_4:+38209273 Msa1152510:CDS
TTATTCCAGAAGGGATCATG+AGG 0.647125 7_4:-38207645 None:intergenic
GTGTGGAACTTACCTTGGCA+AGG 0.655568 7_4:-38208391 None:intergenic
AGGAGATTGTAAATGCAACA+TGG 0.660136 7_4:+38208178 Msa1152510:CDS
ACCTATGTATGGTGGATGAG+TGG 0.661766 7_4:+38209424 Msa1152510:CDS
TATCAATCCAAACAAAACAA+GGG 0.665595 7_4:+38209882 Msa1152510:CDS
GGATAAACGTATAATGAGTG+TGG 0.666583 7_4:+38210461 Msa1152510:CDS
TCAGTGTATACTGAAAATGG+AGG 0.667022 7_4:+38210570 Msa1152510:CDS
TCAATGAGACAAAGCCAGTG+AGG 0.681040 7_4:+38210412 Msa1152510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTATTTTTTACAGA+GGG - chr7_4:38208517-38208536 None:intergenic 10.0%
!!! TAAATAATTATTTTTTACAG+AGG - chr7_4:38208518-38208537 None:intergenic 10.0%
!! TATGATATCTATATTTATAA+GGG - chr7_4:38208796-38208815 None:intergenic 10.0%
!! ATATGATATCTATATTTATA+AGG - chr7_4:38208797-38208816 None:intergenic 10.0%
!! TTAATGATTTAATTCAAATA+GGG - chr7_4:38209483-38209502 None:intergenic 10.0%
!! TTTAATGATTTAATTCAAAT+AGG - chr7_4:38209484-38209503 None:intergenic 10.0%
!! ATCATTGCATAAAAAATTTA+GGG - chr7_4:38208110-38208129 None:intergenic 15.0%
!!! CAATTTTCTTGTATAAAAAA+TGG + chr7_4:38208318-38208337 Msa1152510:CDS 15.0%
!! ACATCAAATTACAAAATTTA+AGG - chr7_4:38208660-38208679 None:intergenic 15.0%
!!! TTTTTTTACAGAAAATAAAC+TGG + chr7_4:38208736-38208755 Msa1152510:intron 15.0%
!! GATTAAGTTAATAGATTATT+GGG - chr7_4:38209056-38209075 None:intergenic 15.0%
!! AGATTAAGTTAATAGATTAT+TGG - chr7_4:38209057-38209076 None:intergenic 15.0%
!! AATAATCTATTAACTTAATC+TGG + chr7_4:38209056-38209075 Msa1152510:intron 15.0%
!! ATAATCTATTAACTTAATCT+GGG + chr7_4:38209057-38209076 Msa1152510:intron 15.0%
!!! AAGTTATTACTTTAACTTTA+AGG + chr7_4:38209185-38209204 Msa1152510:intron 15.0%
!! ATGTAGAATATTTATCATGT+GGG - chr7_4:38207400-38207419 None:intergenic 20.0%
!! ATGTTAAAAAAGATACTAGA+GGG - chr7_4:38207449-38207468 None:intergenic 20.0%
!! AATGTTAAAAAAGATACTAG+AGG - chr7_4:38207450-38207469 None:intergenic 20.0%
!! CATCATTGCATAAAAAATTT+AGG - chr7_4:38208111-38208130 None:intergenic 20.0%
!! GAAAATTGTCTTTCTATATA+TGG - chr7_4:38208306-38208325 None:intergenic 20.0%
!!! ACCTTTTGACATTATAAATA+GGG + chr7_4:38208447-38208466 Msa1152510:intron 20.0%
!!! TTCATAGATTTTTGATTTTG+AGG - chr7_4:38208986-38209005 None:intergenic 20.0%
!! AATCAAAAATCTATGAAAAG+AGG + chr7_4:38208989-38209008 Msa1152510:CDS 20.0%
!! ATCAAAAATCTATGAAAAGA+GGG + chr7_4:38208990-38209009 Msa1152510:CDS 20.0%
!! TAATCTATTAACTTAATCTG+GGG + chr7_4:38209058-38209077 Msa1152510:intron 20.0%
!! AAAGAAAAGGATAATAAAAG+TGG + chr7_4:38209345-38209364 Msa1152510:CDS 20.0%
!!! TCTAGTTTATGAATTTTAGA+TGG + chr7_4:38209761-38209780 Msa1152510:intron 20.0%
!!! CTAGTTTATGAATTTTAGAT+GGG + chr7_4:38209762-38209781 Msa1152510:intron 20.0%
!!! TAGTTTATGAATTTTAGATG+GGG + chr7_4:38209763-38209782 Msa1152510:intron 20.0%
!! ATTTCAGAATATAGAATTGA+TGG + chr7_4:38210540-38210559 Msa1152510:CDS 20.0%
!!! TACATGGAATCAAATATTTT+TGG + chr7_4:38210671-38210690 Msa1152510:CDS 20.0%
! CATGTAGAATATTTATCATG+TGG - chr7_4:38207401-38207420 None:intergenic 25.0%
!! TTAAAGCATAGTATGTGTTT+TGG - chr7_4:38207486-38207505 None:intergenic 25.0%
! AAGGAATTAGAATGAATTAG+TGG - chr7_4:38207594-38207613 None:intergenic 25.0%
!! CAAATAGAGATGATAATGAT+AGG - chr7_4:38207700-38207719 None:intergenic 25.0%
! ATCTCTGAATTATTGAATGT+CGG + chr7_4:38208055-38208074 Msa1152510:intron 25.0%
! AGATTCTGATTATCAACATT+GGG + chr7_4:38208347-38208366 Msa1152510:CDS 25.0%
! GAAATCACAATTAACATGTT+TGG - chr7_4:38208418-38208437 None:intergenic 25.0%
!! CACCTTTTGACATTATAAAT+AGG + chr7_4:38208446-38208465 Msa1152510:intron 25.0%
! ACCCTATTTATAATGTCAAA+AGG - chr7_4:38208451-38208470 None:intergenic 25.0%
! CAAAGAATCTTCAAATTACA+GGG - chr7_4:38208549-38208568 None:intergenic 25.0%
! TGGAAATCACTAATATTACA+TGG + chr7_4:38208756-38208775 Msa1152510:intron 25.0%
! ATTCACTTCAAAGAAATCAA+TGG + chr7_4:38208927-38208946 Msa1152510:CDS 25.0%
! TTCACTTCAAAGAAATCAAT+GGG + chr7_4:38208928-38208947 Msa1152510:CDS 25.0%
! TCAAAAATCTATGAAAAGAG+GGG + chr7_4:38208991-38209010 Msa1152510:CDS 25.0%
! ATAGTGCTAATATAGATACT+TGG + chr7_4:38209226-38209245 Msa1152510:intron 25.0%
!!! ATACATAGGTATTGAAAACA+AGG - chr7_4:38209414-38209433 None:intergenic 25.0%
!! TTGTTTTCAATACCTATGTA+TGG + chr7_4:38209413-38209432 Msa1152510:CDS 25.0%
! CATATTTCACTGCAATATAA+CGG - chr7_4:38209569-38209588 None:intergenic 25.0%
!!! TTCATCATGGTTTTAAATTG+CGG - chr7_4:38209672-38209691 None:intergenic 25.0%
! TCATTGTTGAATATTCATCA+TGG - chr7_4:38209685-38209704 None:intergenic 25.0%
!! AGAAATCATTTTCATCACTT+TGG - chr7_4:38209737-38209756 None:intergenic 25.0%
! TATCAATCCAAACAAAACAA+GGG + chr7_4:38209882-38209901 Msa1152510:CDS 25.0%
!!! GTCTATTTTTTGTAATGAGT+AGG + chr7_4:38210060-38210079 Msa1152510:intron 25.0%
! AAATAAAAAATTCGAGCGAT+TGG - chr7_4:38210164-38210183 None:intergenic 25.0%
! AAAGCAGAAAATTTCTTACA+AGG + chr7_4:38210231-38210250 Msa1152510:intron 25.0%
! AATATTTGATTCCATGTATC+TGG - chr7_4:38210669-38210688 None:intergenic 25.0%
!! AATTTTTACTTGCAAAACCA+AGG + chr7_4:38210837-38210856 Msa1152510:three_prime_UTR 25.0%
!! ATTTTTACTTGCAAAACCAA+GGG + chr7_4:38210838-38210857 Msa1152510:three_prime_UTR 25.0%
TTAATATACATCACCAAGCA+AGG - chr7_4:38207267-38207286 None:intergenic 30.0%
!!! GGTTTTATGCATTTTTGAGT+AGG - chr7_4:38207516-38207535 None:intergenic 30.0%
AAAAAAGGTTTAGAGAGGTA+AGG - chr7_4:38207537-38207556 None:intergenic 30.0%
TGAAGACATTGCACAAAAAA+AGG - chr7_4:38207552-38207571 None:intergenic 30.0%
GAATAAGCTTAATAGTGAGA+AGG - chr7_4:38207613-38207632 None:intergenic 30.0%
! GGATTTTCATTATTCCAGAA+GGG - chr7_4:38207657-38207676 None:intergenic 30.0%
! TGGATTTTCATTATTCCAGA+AGG - chr7_4:38207658-38207677 None:intergenic 30.0%
GGAATAATGAAAATCCATAG+AGG + chr7_4:38207661-38207680 Msa1152510:CDS 30.0%
! GAGATGATAATGATAGGAAA+AGG - chr7_4:38207694-38207713 None:intergenic 30.0%
ACAAGGTTTGAACTTGAAAA+TGG - chr7_4:38207782-38207801 None:intergenic 30.0%
!! AGACTTACTTGATTTTAGTC+TGG - chr7_4:38207818-38207837 None:intergenic 30.0%
CGAAAATGAAGATATAGTTG+TGG - chr7_4:38207854-38207873 None:intergenic 30.0%
AACTACTTCGAATGAAAAGT+TGG + chr7_4:38207993-38208012 Msa1152510:intron 30.0%
! TTTTTACGATCCGTATCAAA+TGG + chr7_4:38208083-38208102 Msa1152510:intron 30.0%
! AATTTAGGGTCCATTTGATA+CGG - chr7_4:38208096-38208115 None:intergenic 30.0%
!! AGATGATAAGAAAGTTGATG+AGG + chr7_4:38208158-38208177 Msa1152510:intron 30.0%
!! TGTAGATTGGCTTTATTGAT+TGG - chr7_4:38208269-38208288 None:intergenic 30.0%
CAGATTCTGATTATCAACAT+TGG + chr7_4:38208346-38208365 Msa1152510:CDS 30.0%
GAAATTGCTAATATTGAAGG+GGG - chr7_4:38208487-38208506 None:intergenic 30.0%
GGAAATTGCTAATATTGAAG+GGG - chr7_4:38208488-38208507 None:intergenic 30.0%
CGGAAATTGCTAATATTGAA+GGG - chr7_4:38208489-38208508 None:intergenic 30.0%
CCTTCAATATTAGCAATTTC+CGG + chr7_4:38208487-38208506 Msa1152510:intron 30.0%
!!! ATTTTTTACAGAGGGTAAAC+CGG - chr7_4:38208509-38208528 None:intergenic 30.0%
CCAAAGAATCTTCAAATTAC+AGG - chr7_4:38208550-38208569 None:intergenic 30.0%
CCTGTAATTTGAAGATTCTT+TGG + chr7_4:38208547-38208566 Msa1152510:intron 30.0%
ACAAAATCGATGATATGACA+TGG + chr7_4:38208594-38208613 Msa1152510:intron 30.0%
CAAAATCGATGATATGACAT+GGG + chr7_4:38208595-38208614 Msa1152510:intron 30.0%
AAAATCGATGATATGACATG+GGG + chr7_4:38208596-38208615 Msa1152510:intron 30.0%
CTTGTAGTTTGAAGATTCTT+TGG - chr7_4:38208698-38208717 None:intergenic 30.0%
CAAAGAATCTTCAAACTACA+AGG + chr7_4:38208696-38208715 Msa1152510:intron 30.0%
! TTAGCTCTCAAAAAACTTCA+AGG + chr7_4:38208881-38208900 Msa1152510:CDS 30.0%
TAGCTCTCAAAAAACTTCAA+GGG + chr7_4:38208882-38208901 Msa1152510:CDS 30.0%
GGAAAAGACTACTATTTGTA+GGG + chr7_4:38208903-38208922 Msa1152510:CDS 30.0%
GAAAAGACTACTATTTGTAG+GGG + chr7_4:38208904-38208923 Msa1152510:CDS 30.0%
! ATGGGAATCTTTTGTATGTT+TGG + chr7_4:38208946-38208965 Msa1152510:CDS 30.0%
! CTTTTGTATGTTTGGTAGAA+TGG + chr7_4:38208954-38208973 Msa1152510:CDS 30.0%
!! TTAAGCCTTGTTTGGATAAA+CGG - chr7_4:38209152-38209171 None:intergenic 30.0%
!! GAATTTGTTTAAGCCTTGTT+TGG - chr7_4:38209160-38209179 None:intergenic 30.0%
ATGCTAGTATAGAATTCTAC+TGG + chr7_4:38209272-38209291 Msa1152510:CDS 30.0%
TGCTAGTATAGAATTCTACT+GGG + chr7_4:38209273-38209292 Msa1152510:CDS 30.0%
AACACTGACATACATTTCAT+TGG + chr7_4:38209316-38209335 Msa1152510:CDS 30.0%
TCATTGGAGATACAAAGAAA+AGG + chr7_4:38209332-38209351 Msa1152510:CDS 30.0%
TCAAAGAGAGAGCAAAAAAT+TGG + chr7_4:38209374-38209393 Msa1152510:CDS 30.0%
! TTTTCAATACCTATGTATGG+TGG + chr7_4:38209416-38209435 Msa1152510:CDS 30.0%
! TCATTTAGCAATGGATTTGA+AGG + chr7_4:38209787-38209806 Msa1152510:CDS 30.0%
! CATTTAGCAATGGATTTGAA+GGG + chr7_4:38209788-38209807 Msa1152510:CDS 30.0%
CTATCAATCCAAACAAAACA+AGG + chr7_4:38209881-38209900 Msa1152510:CDS 30.0%
ATAGTTCTCAACAAATCTCT+AGG - chr7_4:38210307-38210326 None:intergenic 30.0%
AATTGTTAAGTGAAGAAGAG+AGG + chr7_4:38210595-38210614 Msa1152510:CDS 30.0%
AAAATGCAGATTGCATACAT+TGG + chr7_4:38210628-38210647 Msa1152510:CDS 30.0%
! AGGGTAAGAATGAGTTGAAA+GGG - chr7_4:38207430-38207449 None:intergenic 35.0%
GCACAAAAAAAGGTTTAGAG+AGG - chr7_4:38207542-38207561 None:intergenic 35.0%
!!! GAAAAGGCATTTTTCCTCTA+TGG - chr7_4:38207678-38207697 None:intergenic 35.0%
TTTAGTCTGGTGTTCTTTCT+AGG - chr7_4:38207805-38207824 None:intergenic 35.0%
CAACTTTCTTATCATCTGCT+AGG - chr7_4:38208155-38208174 None:intergenic 35.0%
AGGAGATTGTAAATGCAACA+TGG + chr7_4:38208178-38208197 Msa1152510:CDS 35.0%
CAACATTGCCAATGGAAAAT+GGG + chr7_4:38208236-38208255 Msa1152510:CDS 35.0%
! GTTGAAAACCCATTTTCCAT+TGG - chr7_4:38208247-38208266 None:intergenic 35.0%
CAAGTTATGTCAGTGTAGAT+TGG - chr7_4:38208282-38208301 None:intergenic 35.0%
! CAATTAACATGTTTGGAGTG+TGG - chr7_4:38208411-38208430 None:intergenic 35.0%
CCGGAAATTGCTAATATTGA+AGG - chr7_4:38208490-38208509 None:intergenic 35.0%
GAATCTTCAAATTACAGGGT+TGG - chr7_4:38208545-38208564 None:intergenic 35.0%
!! TCACCTTCATGAATTTTGAC+TGG + chr7_4:38208571-38208590 Msa1152510:intron 35.0%
TGTCCAGTCAAAATTCATGA+AGG - chr7_4:38208577-38208596 None:intergenic 35.0%
!!! AGTTTTTTGAGAGCTAACAC+TGG - chr7_4:38208878-38208897 None:intergenic 35.0%
GGGAAAAGACTACTATTTGT+AGG + chr7_4:38208902-38208921 Msa1152510:CDS 35.0%
TCATTCAGTCTTCAAAGTCA+AGG + chr7_4:38209018-38209037 Msa1152510:CDS 35.0%
TTTAGCCGTTTATCCAAACA+AGG + chr7_4:38209144-38209163 Msa1152510:intron 35.0%
TGTCAATGTAGCCACAATTA+CGG + chr7_4:38209598-38209617 Msa1152510:intron 35.0%
! AAAGCTAACTTGTATGCTAC+TGG - chr7_4:38209832-38209851 None:intergenic 35.0%
!! ACAAGTTAGCTTTGAAGACT+TGG + chr7_4:38209839-38209858 Msa1152510:CDS 35.0%
!! CAAGTTAGCTTTGAAGACTT+GGG + chr7_4:38209840-38209859 Msa1152510:CDS 35.0%
TTTGAAGACTTGGGCTAATT+GGG + chr7_4:38209849-38209868 Msa1152510:CDS 35.0%
!!! AAGAAGACCCTTGTTTTGTT+TGG - chr7_4:38209892-38209911 None:intergenic 35.0%
TTAGGTCTAATGCAAGTGAT+TGG - chr7_4:38210134-38210153 None:intergenic 35.0%
ATTTACCAGAAGCCAAGATT+GGG + chr7_4:38210365-38210384 Msa1152510:intron 35.0%
!! AGTGAGGAAAAAGAAGCATT+GGG + chr7_4:38210428-38210447 Msa1152510:CDS 35.0%
GGATAAACGTATAATGAGTG+TGG + chr7_4:38210461-38210480 Msa1152510:CDS 35.0%
GTTACATTGATGAATGTCAC+TGG - chr7_4:38210516-38210535 None:intergenic 35.0%
TCCTCAGTGTATACTGAAAA+TGG + chr7_4:38210567-38210586 Msa1152510:CDS 35.0%
! TCCATTTTCAGTATACACTG+AGG - chr7_4:38210571-38210590 None:intergenic 35.0%
TCAGTGTATACTGAAAATGG+AGG + chr7_4:38210570-38210589 Msa1152510:CDS 35.0%
CAGTGTATACTGAAAATGGA+GGG + chr7_4:38210571-38210590 Msa1152510:CDS 35.0%
! TGTATGCAATCTGCATTTTG+TGG - chr7_4:38210627-38210646 None:intergenic 35.0%
ATACATCACCAAGCAAGGTA+TGG - chr7_4:38207262-38207281 None:intergenic 40.0%
! GAGGGTAAGAATGAGTTGAA+AGG - chr7_4:38207431-38207450 None:intergenic 40.0%
TTATTCCAGAAGGGATCATG+AGG - chr7_4:38207648-38207667 None:intergenic 40.0%
! CGCATGTTACTTGACTCTAA+AGG + chr7_4:38207872-38207891 Msa1152510:intron 40.0%
! ATGCAACATGGATTGATGAC+AGG + chr7_4:38208190-38208209 Msa1152510:CDS 40.0%
GAAGAATGCAACATTGCCAA+TGG + chr7_4:38208228-38208247 Msa1152510:CDS 40.0%
GCAACATTGCCAATGGAAAA+TGG + chr7_4:38208235-38208254 Msa1152510:CDS 40.0%
CTGATTATCAACATTGGGAG+TGG + chr7_4:38208352-38208371 Msa1152510:CDS 40.0%
CCTGTAATTGGCGAGAATTT+CGG - chr7_4:38208626-38208645 None:intergenic 40.0%
CGAAATTCTCGCCAATTACA+GGG + chr7_4:38208624-38208643 Msa1152510:intron 40.0%
GAAATTCTCGCCAATTACAG+GGG + chr7_4:38208625-38208644 Msa1152510:intron 40.0%
AAATTCTCGCCAATTACAGG+GGG + chr7_4:38208626-38208645 Msa1152510:intron 40.0%
ACTTGGATGTGTTGTAACAC+AGG + chr7_4:38209243-38209262 Msa1152510:intron 40.0%
TGTTAGACTCAACCAGGTAT+GGG - chr7_4:38209300-38209319 None:intergenic 40.0%
GAGAGAGCAAAAAATTGGAC+AGG + chr7_4:38209379-38209398 Msa1152510:CDS 40.0%
AGCAAAAAATTGGACAGGAG+TGG + chr7_4:38209384-38209403 Msa1152510:CDS 40.0%
CAACAGTAGCCACCATATAA+CGG - chr7_4:38209632-38209651 None:intergenic 40.0%
ACTGTTGTCTGTTGTGATTG+TGG + chr7_4:38209645-38209664 Msa1152510:intron 40.0%
AGATGGGGTTCATTTAGCAA+TGG + chr7_4:38209778-38209797 Msa1152510:intron 40.0%
! CTTTGAAGACTTGGGCTAAT+TGG + chr7_4:38209848-38209867 Msa1152510:CDS 40.0%
CATTTACCAGAAGCCAAGAT+TGG + chr7_4:38210364-38210383 Msa1152510:intron 40.0%
TTTACCAGAAGCCAAGATTG+GGG + chr7_4:38210366-38210385 Msa1152510:intron 40.0%
! CAATGCTTCTTTTTCCTCAC+TGG - chr7_4:38210429-38210448 None:intergenic 40.0%
! CAGTGAGGAAAAAGAAGCAT+TGG + chr7_4:38210427-38210446 Msa1152510:CDS 40.0%
!! GTGAGGAAAAAGAAGCATTG+GGG + chr7_4:38210429-38210448 Msa1152510:CDS 40.0%
!! AAAAAGAAGCATTGGGGAAC+TGG + chr7_4:38210435-38210454 Msa1152510:CDS 40.0%
AAGCGAGCAAAATTAACCCT+TGG - chr7_4:38210857-38210876 None:intergenic 40.0%
TTTGTGAGCCATACCTTGCT+TGG + chr7_4:38207251-38207270 Msa1152510:five_prime_UTR 45.0%
!! CTGGTGTTCTTTCTAGGACA+AGG - chr7_4:38207799-38207818 None:intergenic 45.0%
TTGGAGTGTGGAACTTACCT+TGG - chr7_4:38208399-38208418 None:intergenic 45.0%
CCGAAATTCTCGCCAATTAC+AGG + chr7_4:38208623-38208642 Msa1152510:intron 45.0%
GTTAGACTCAACCAGGTATG+GGG - chr7_4:38209299-38209318 None:intergenic 45.0%
GTGTTAGACTCAACCAGGTA+TGG - chr7_4:38209301-38209320 None:intergenic 45.0%
TGTCAGTGTTAGACTCAACC+AGG - chr7_4:38209306-38209325 None:intergenic 45.0%
!! ACCTATGTATGGTGGATGAG+TGG + chr7_4:38209424-38209443 Msa1152510:CDS 45.0%
ACCACTCATCCACCATACAT+AGG - chr7_4:38209428-38209447 None:intergenic 45.0%
!! TATGGTGGATGAGTGGTTCT+AGG + chr7_4:38209431-38209450 Msa1152510:CDS 45.0%
ACGGTTGTGAAGCCGTTATA+TGG + chr7_4:38209617-38209636 Msa1152510:intron 45.0%
GTTGTGAAGCCGTTATATGG+TGG + chr7_4:38209620-38209639 Msa1152510:intron 45.0%
CAATGTCACCAACACACACA+AGG + chr7_4:38209917-38209936 Msa1152510:CDS 45.0%
GAGAAAGACCTTGTGTGTGT+TGG - chr7_4:38209928-38209947 None:intergenic 45.0%
CTTTCATGTTGCCCCAATCT+TGG - chr7_4:38210380-38210399 None:intergenic 45.0%
TCAATGAGACAAAGCCAGTG+AGG + chr7_4:38210412-38210431 Msa1152510:CDS 45.0%
! TGCATACATTGGTGTTTGCC+TGG + chr7_4:38210639-38210658 Msa1152510:CDS 45.0%
! TTCCATGTATCTGGAACACC+AGG - chr7_4:38210660-38210679 None:intergenic 45.0%
CCAGAAGGGATCATGAGGAA+AGG - chr7_4:38207643-38207662 None:intergenic 50.0%
CCTTTCCTCATGATCCCTTC+TGG + chr7_4:38207640-38207659 Msa1152510:exon 50.0%
CTTGGCAAGGTGCAATCTTC+TGG - chr7_4:38208381-38208400 None:intergenic 50.0%
CAGAAGATTGCACCTTGCCA+AGG + chr7_4:38208379-38208398 Msa1152510:CDS 50.0%
GTGTGGAACTTACCTTGGCA+AGG - chr7_4:38208394-38208413 None:intergenic 50.0%
GTACTTTCGCCCCCTGTAAT+TGG - chr7_4:38208638-38208657 None:intergenic 50.0%
CGGCTTCACAACCGTAATTG+TGG - chr7_4:38209612-38209631 None:intergenic 50.0%
!! GAAGCATTGGGGAACTGGTT+CGG + chr7_4:38210440-38210459 Msa1152510:CDS 50.0%
TGCCTGGTGTTCCAGATACA+TGG + chr7_4:38210655-38210674 Msa1152510:CDS 50.0%
ATTCTACTGGGCCCCATACC+TGG + chr7_4:38209285-38209304 Msa1152510:CDS 55.0%
CGAGCGATTGGTGCGCAATT+AGG - chr7_4:38210152-38210171 None:intergenic 55.0%
GTTGCCCCAATCTTGGCTTC+TGG - chr7_4:38210373-38210392 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 38207230 38210921 38207230 ID=Msa1152510;Name=Msa1152510
chr7_4 mRNA 38207230 38210921 38207230 ID=Msa1152510-mRNA-1;Parent=Msa1152510;Name=Msa1152510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=419|1|1|1|1|1|6|217|427
chr7_4 exon 38207230 38207829 38207230 ID=Msa1152510-mRNA-1:exon:9129;Parent=Msa1152510-mRNA-1
chr7_4 exon 38208160 38208400 38208160 ID=Msa1152510-mRNA-1:exon:9130;Parent=Msa1152510-mRNA-1
chr7_4 exon 38208868 38209039 38208868 ID=Msa1152510-mRNA-1:exon:9131;Parent=Msa1152510-mRNA-1
chr7_4 exon 38209265 38209464 38209265 ID=Msa1152510-mRNA-1:exon:9132;Parent=Msa1152510-mRNA-1
chr7_4 exon 38209780 38209938 38209780 ID=Msa1152510-mRNA-1:exon:9133;Parent=Msa1152510-mRNA-1
chr7_4 exon 38210374 38210921 38210374 ID=Msa1152510-mRNA-1:exon:9134;Parent=Msa1152510-mRNA-1
chr7_4 five_prime_UTR 38207230 38207648 38207230 ID=Msa1152510-mRNA-1:five_prime_utr;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38207649 38207829 38207649 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38208160 38208400 38208160 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38208868 38209039 38208868 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38209265 38209464 38209265 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38209780 38209938 38209780 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 CDS 38210374 38210704 38210374 ID=Msa1152510-mRNA-1:cds;Parent=Msa1152510-mRNA-1
chr7_4 three_prime_UTR 38210705 38210921 38210705 ID=Msa1152510-mRNA-1:three_prime_utr;Parent=Msa1152510-mRNA-1
Gene Sequence

>Msa1152510

ATGATCCCTTCTGGAATAATGAAAATCCATAGAGGAAAAATGCCTTTTCCTATCATTATCATCTCTATTTGTATTCTTGTCTTCGTTGCTGTTTTGTATGCAGAGAGACTCAGTTTTCTTTCTTCTAAATCCATTTTCAAGTTCAAACCTTGTCCTAGAAAGAACACCAGACTAAAATCAAATGATAAGAAAGTTGATGAGGAGATTGTAAATGCAACATGGATTGATGACAGGTTTGATTTTGACTCAGAAGAATGCAACATTGCCAATGGAAAATGGGTTTTCAACCAATCAATAAAGCCAATCTACACTGACATAACTTGTCCATATATAGAAAGACAATTTTCTTGTATAAAAAATGGTAGAGCAGATTCTGATTATCAACATTGGGAGTGGCAACCAGAAGATTGCACCTTGCCAAGTTTCAATCCAGTGTTAGCTCTCAAAAAACTTCAAGGGAAAAGACTACTATTTGTAGGGGATTCACTTCAAAGAAATCAATGGGAATCTTTTGTATGTTTGGTAGAATGGATCATACCTCAAAATCAAAAATCTATGAAAAGAGGGGTTGTTCATTCAGTCTTCAAAGTCAAGGAATACAATGCTAGTATAGAATTCTACTGGGCCCCATACCTGGTTGAGTCTAACACTGACATACATTTCATTGGAGATACAAAGAAAAGGATAATAAAAGTGGATACTATCAAAGAGAGAGCAAAAAATTGGACAGGAGTGGATATCCTTGTTTTCAATACCTATGTATGGTGGATGAGTGGTTCTAGGATTAAATCATTATGGGGTTCATTTAGCAATGGATTTGAAGGGTATGAAGAATTTGATACACCAGTAGCATACAAGTTAGCTTTGAAGACTTGGGCTAATTGGGTTGACTCAACTATCAATCCAAACAAAACAAGGGTCTTCTTCACTACAATGTCACCAACACACACAAGAAGCCAAGATTGGGGCAACATGAAAGATGAGAAATGCTTCAATGAGACAAAGCCAGTGAGGAAAAAGAAGCATTGGGGAACTGGTTCGGATAAACGTATAATGAGTGTGGTAGCAAAAGTTGTGAAGAAAATGAAAGTTCCAGTGACATTCATCAATGTAACACAAATTTCAGAATATAGAATTGATGGTCATTCCTCAGTGTATACTGAAAATGGAGGGAAATTGTTAAGTGAAGAAGAGAGGACAAATCCACAAAATGCAGATTGCATACATTGGTGTTTGCCTGGTGTTCCAGATACATGGAATCAAATATTTTTGGCAATGTTATAA

Protein sequence

>Msa1152510

MIPSGIMKIHRGKMPFPIIIISICILVFVAVLYAERLSFLSSKSIFKFKPCPRKNTRLKSNDKKVDEEIVNATWIDDRFDFDSEECNIANGKWVFNQSIKPIYTDITCPYIERQFSCIKNGRADSDYQHWEWQPEDCTLPSFNPVLALKKLQGKRLLFVGDSLQRNQWESFVCLVEWIIPQNQKSMKRGVVHSVFKVKEYNASIEFYWAPYLVESNTDIHFIGDTKKRIIKVDTIKERAKNWTGVDILVFNTYVWWMSGSRIKSLWGSFSNGFEGYEEFDTPVAYKLALKTWANWVDSTINPNKTRVFFTTMSPTHTRSQDWGNMKDEKCFNETKPVRKKKHWGTGSDKRIMSVVAKVVKKMKVPVTFINVTQISEYRIDGHSSVYTENGGKLLSEEERTNPQNADCIHWCLPGVPDTWNQIFLAML*