Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934930 | KEH24868.1 | 67.010 | 97 | 23 | 3 | 29 | 116 | 143 | 239 | 3.37e-30 | 124 |
| Msa0934930 | KEH24868.1 | 88.288 | 222 | 7 | 4 | 24 | 236 | 1 | 212 | 1.90e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934930 | sp|Q9FL07|ATL46_ARATH | 33.600 | 125 | 68 | 3 | 138 | 252 | 79 | 198 | 8.58e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934930 | A0A072U6Z9 | 67.010 | 97 | 23 | 3 | 29 | 116 | 143 | 239 | 1.61e-30 | 124 |
| Msa0934930 | A0A072U6Z9 | 88.288 | 222 | 7 | 4 | 24 | 236 | 1 | 212 | 9.08e-133 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0367870 | Msa0934930 | 0.801485 | 8.806874e-49 | -8.615850e-47 |
| Msa0427120 | Msa0934930 | 0.800086 | 1.699541e-48 | -8.615850e-47 |
| Msa0460590 | Msa0934930 | 0.800612 | 1.328412e-48 | -8.615850e-47 |
| Msa0258310 | Msa0934930 | 0.819316 | 1.238051e-52 | -8.615850e-47 |
| Msa0266180 | Msa0934930 | 0.804576 | 2.021804e-49 | -8.615850e-47 |
| Msa0875290 | Msa0934930 | 0.814316 | 1.639678e-51 | -8.615850e-47 |
| Msa0934930 | Msa0972100 | 0.930228 | 2.221104e-93 | -8.615850e-47 |
| Msa0934930 | Msa1031930 | 0.803550 | 3.304875e-49 | -8.615850e-47 |
| Msa0934930 | Msa1094190 | 0.813921 | 2.003505e-51 | -8.615850e-47 |
| Msa0934930 | Msa1101090 | 0.803516 | 3.359026e-49 | -8.615850e-47 |
| Msa0934930 | Msa1160500 | 0.802742 | 4.856039e-49 | -8.615850e-47 |
| Msa0934930 | Msa1205280 | 0.803221 | 3.865545e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934930 | MtrunA17_Chr6g0451031 | 89.655 | 116 | 5 | 1 | 1 | 109 | 14 | 129 | 2.55e-70 | 212 |
| Msa0934930 | MtrunA17_Chr6g0451031 | 61.224 | 98 | 21 | 2 | 155 | 236 | 13 | 109 | 4.45e-32 | 115 |
| Msa0934930 | MtrunA17_Chr6g0451051 | 64.463 | 121 | 34 | 3 | 2 | 114 | 12 | 131 | 9.05e-45 | 148 |
| Msa0934930 | MtrunA17_Chr6g0451051 | 69.149 | 94 | 17 | 1 | 155 | 236 | 13 | 106 | 6.13e-40 | 135 |
| Msa0934930 | MtrunA17_Chr6g0451041 | 68.293 | 82 | 1 | 2 | 156 | 236 | 1 | 58 | 9.26e-29 | 105 |
| Msa0934930 | MtrunA17_Chr6g0451041 | 72.059 | 68 | 12 | 1 | 56 | 116 | 18 | 85 | 8.22e-27 | 100 |
| Msa0934930 | MtrunA17_Chr3g0117821 | 64.062 | 64 | 21 | 2 | 175 | 236 | 62 | 125 | 3.48e-23 | 92.4 |
| Msa0934930 | MtrunA17_Chr3g0117821 | 49.296 | 71 | 26 | 2 | 36 | 96 | 62 | 132 | 3.54e-17 | 76.6 |
| Msa0934930 | MtrunA17_Chr6g0451161 | 33.028 | 109 | 68 | 2 | 144 | 252 | 111 | 214 | 5.71e-14 | 71.2 |
| Msa0934930 | MtrunA17_Chr8g0364881 | 38.554 | 83 | 50 | 1 | 170 | 252 | 68 | 149 | 4.53e-13 | 68.2 |
| Msa0934930 | MtrunA17_Chr3g0143301 | 36.364 | 99 | 45 | 2 | 138 | 236 | 31 | 111 | 1.50e-12 | 63.2 |
| Msa0934930 | MtrunA17_Chr4g0059281 | 30.973 | 113 | 73 | 2 | 153 | 265 | 93 | 200 | 1.78e-12 | 66.2 |
| Msa0934930 | MtrunA17_Chr1g0157091 | 35.556 | 90 | 51 | 3 | 167 | 252 | 45 | 131 | 2.24e-12 | 62.8 |
| Msa0934930 | MtrunA17_Chr6g0486651 | 43.939 | 66 | 37 | 0 | 171 | 236 | 94 | 159 | 6.88e-12 | 65.1 |
| Msa0934930 | MtrunA17_Chr2g0307411 | 43.421 | 76 | 35 | 1 | 161 | 236 | 73 | 140 | 7.80e-12 | 62.8 |
| Msa0934930 | MtrunA17_Chr4g0027761 | 36.782 | 87 | 44 | 3 | 158 | 236 | 80 | 163 | 1.39e-11 | 62.0 |
| Msa0934930 | MtrunA17_Chr3g0123631 | 40.541 | 74 | 41 | 1 | 166 | 236 | 42 | 115 | 1.41e-11 | 62.0 |
| Msa0934930 | MtrunA17_Chr5g0427431 | 42.424 | 66 | 38 | 0 | 171 | 236 | 135 | 200 | 1.45e-11 | 63.9 |
| Msa0934930 | MtrunA17_Chr2g0295571 | 39.706 | 68 | 41 | 0 | 169 | 236 | 92 | 159 | 1.94e-11 | 63.2 |
| Msa0934930 | MtrunA17_Chr3g0123641 | 40.541 | 74 | 41 | 1 | 166 | 236 | 42 | 115 | 2.00e-11 | 62.4 |
| Msa0934930 | MtrunA17_Chr5g0407431 | 35.714 | 84 | 52 | 1 | 163 | 244 | 70 | 153 | 2.66e-11 | 61.6 |
| Msa0934930 | MtrunA17_Chr5g0407431 | 33.636 | 110 | 53 | 5 | 1 | 95 | 47 | 151 | 4.01e-11 | 61.2 |
| Msa0934930 | MtrunA17_Chr8g0383941 | 44.118 | 68 | 37 | 1 | 169 | 235 | 106 | 173 | 2.95e-11 | 61.6 |
| Msa0934930 | MtrunA17_Chr4g0073141 | 41.026 | 78 | 40 | 2 | 192 | 269 | 140 | 211 | 3.24e-11 | 63.2 |
| Msa0934930 | MtrunA17_Chr7g0244851 | 31.532 | 111 | 60 | 2 | 130 | 235 | 47 | 146 | 3.80e-11 | 60.5 |
| Msa0934930 | MtrunA17_Chr8g0371291 | 38.806 | 67 | 37 | 1 | 170 | 236 | 158 | 220 | 4.13e-11 | 61.2 |
| Msa0934930 | MtrunA17_Chr3g0133001 | 40.909 | 66 | 39 | 0 | 171 | 236 | 131 | 196 | 4.62e-11 | 62.4 |
| Msa0934930 | MtrunA17_Chr2g0317671 | 43.243 | 74 | 36 | 2 | 169 | 236 | 126 | 199 | 7.94e-11 | 60.1 |
| Msa0934930 | MtrunA17_Chr5g0413841 | 38.961 | 77 | 47 | 0 | 176 | 252 | 122 | 198 | 8.31e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934930 | AT5G40250.1 | 33.600 | 125 | 68 | 3 | 138 | 252 | 79 | 198 | 8.72e-16 | 76.6 |
| Msa0934930 | AT1G23980.1 | 41.250 | 80 | 46 | 1 | 176 | 255 | 124 | 202 | 3.74e-13 | 68.9 |
| Msa0934930 | AT3G48030.2 | 41.791 | 67 | 38 | 1 | 171 | 236 | 103 | 169 | 1.32e-12 | 66.6 |
| Msa0934930 | AT3G48030.1 | 41.791 | 67 | 38 | 1 | 171 | 236 | 181 | 247 | 1.74e-12 | 67.0 |
| Msa0934930 | AT4G28890.1 | 37.500 | 80 | 41 | 1 | 166 | 236 | 84 | 163 | 4.67e-12 | 65.9 |
| Msa0934930 | AT5G01880.1 | 38.235 | 68 | 42 | 0 | 168 | 235 | 77 | 144 | 5.62e-12 | 62.8 |
| Msa0934930 | AT3G60220.1 | 40.278 | 72 | 40 | 1 | 176 | 244 | 94 | 165 | 1.18e-11 | 64.3 |
| Msa0934930 | AT1G74410.1 | 42.647 | 68 | 39 | 0 | 169 | 236 | 149 | 216 | 1.25e-11 | 63.2 |
| Msa0934930 | AT2G17450.1 | 37.838 | 74 | 39 | 1 | 169 | 235 | 68 | 141 | 2.05e-11 | 62.0 |
| Msa0934930 | AT2G27940.1 | 33.333 | 87 | 56 | 2 | 167 | 252 | 112 | 197 | 3.14e-11 | 62.4 |
| Msa0934930 | AT5G05810.1 | 40.909 | 66 | 39 | 0 | 171 | 236 | 121 | 186 | 3.95e-11 | 63.2 |
| Msa0934930 | AT5G57750.1 | 41.791 | 67 | 38 | 1 | 171 | 236 | 96 | 162 | 4.98e-11 | 61.2 |
| Msa0934930 | AT4G30370.1 | 37.143 | 70 | 44 | 0 | 167 | 236 | 86 | 155 | 5.34e-11 | 60.5 |
| Msa0934930 | AT2G42360.1 | 32.609 | 92 | 61 | 1 | 146 | 236 | 57 | 148 | 8.58e-11 | 60.8 |
Find 48 sgRNAs with CRISPR-Local
Find 475 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTCTCCAAATCAATTT+TGG | 0.138551 | 6_3:+5205629 | None:intergenic |
| GATCAAATCGTCAAGTAATT+AGG | 0.154026 | 6_3:-5197437 | None:intergenic |
| TGAGGAAATTCTTCTGCTTC+TGG | 0.215984 | 6_3:+5203276 | None:intergenic |
| GATTATGTTGCAAAAGAAAA+TGG | 0.230340 | 6_3:-5202904 | Msa0934930:CDS |
| AAGAATTTCCAAAATTGATT+TGG | 0.237365 | 6_3:-5205637 | Msa0934930:CDS |
| AAGCATTTCCAAAACTGATT+TGG | 0.260080 | 6_3:-5202944 | Msa0934930:CDS |
| ATAAAGAAACTGAGGAAAAT+TGG | 0.276489 | 6_3:-5203333 | Msa0934930:CDS |
| AAGCTTCTCCAAATCAGTTT+TGG | 0.283082 | 6_3:+5202936 | None:intergenic |
| GCTTGGAGAATTTCACTATT+GGG | 0.299814 | 6_3:-5202855 | Msa0934930:CDS |
| GCTTGGAGAATTTCACTATT+GGG | 0.299814 | 6_3:-5205551 | Msa0934930:CDS |
| GATCTACAAATAGGACAAAT+TGG | 0.310518 | 6_3:+5202757 | None:intergenic |
| TGCTTGGAGAATTTCACTAT+TGG | 0.315711 | 6_3:-5202856 | Msa0934930:CDS |
| TGCTTGGAGAATTTCACTAT+TGG | 0.315711 | 6_3:-5205552 | Msa0934930:CDS |
| GAAGAGGAGCAATGATTGAT+AGG | 0.317847 | 6_3:-5205668 | Msa0934930:CDS |
| CCAATCATAGATCTACAAAT+TGG | 0.351900 | 6_3:+5205444 | None:intergenic |
| ATCAAATCGTCAAGTAATTA+GGG | 0.367556 | 6_3:-5197436 | None:intergenic |
| AGTGGAGACAAAGTTGTTAT+AGG | 0.374604 | 6_3:-5205414 | Msa0934930:CDS |
| AGATCTACAAATTGGACAAA+TGG | 0.376354 | 6_3:+5205452 | None:intergenic |
| ATTTGTGGGAATGGTGGGTT+TGG | 0.393489 | 6_3:-5205736 | None:intergenic |
| CCAATTTGTAGATCTATGAT+TGG | 0.407679 | 6_3:-5205444 | Msa0934930:CDS |
| TGTAATGAGGAGACACAAAT+AGG | 0.421019 | 6_3:+5197506 | None:intergenic |
| GATCTACAAATTGGACAAAT+GGG | 0.428360 | 6_3:+5205453 | None:intergenic |
| ATGCTCAATGTGTGGATCAA+TGG | 0.439509 | 6_3:-5205488 | Msa0934930:CDS |
| AAGAGGAGCAATGATTGATA+GGG | 0.448169 | 6_3:-5205667 | Msa0934930:CDS |
| TATTGATTGTGCAATTTGCT+TGG | 0.451242 | 6_3:-5205568 | Msa0934930:CDS |
| AGAAAATGGAAGTAACCCTT+TGG | 0.453658 | 6_3:-5202890 | Msa0934930:CDS |
| TTTGGATTGTGCAATTTGCT+TGG | 0.487761 | 6_3:-5202872 | Msa0934930:CDS |
| TGTTTGCAACATGACCAGTT+AGG | 0.488616 | 6_3:+5197472 | None:intergenic |
| ACAACCTTGAGAATCCTAAC+TGG | 0.491393 | 6_3:-5197486 | Msa0934930:CDS |
| TTAATATTTGTGGGAATGGT+GGG | 0.510581 | 6_3:-5205741 | None:intergenic |
| CTTGGAGAATTTCACTATTG+GGG | 0.512048 | 6_3:-5202854 | Msa0934930:CDS |
| CTTGGAGAATTTCACTATTG+GGG | 0.512048 | 6_3:-5205550 | Msa0934930:CDS |
| AGCAAATTGCACAATCCAAA+GGG | 0.514135 | 6_3:+5202875 | None:intergenic |
| TTCCTCAATCAAGACTCAAA+AGG | 0.527671 | 6_3:-5203260 | Msa0934930:CDS |
| AGAGGAGCAATGATTGATAG+GGG | 0.531342 | 6_3:-5205666 | Msa0934930:CDS |
| TCTATGATTGGTTCTCATAG+TGG | 0.538054 | 6_3:-5205432 | Msa0934930:CDS |
| TTGTCCTATTTGTAGATCCA+GGG | 0.538530 | 6_3:-5202752 | Msa0934930:intron |
| ATGCTCAATGTGTGGATAAG+TGG | 0.553676 | 6_3:-5202792 | Msa0934930:CDS |
| GGAAGAGAAATCATAGAAAG+TGG | 0.556093 | 6_3:-5205384 | Msa0934930:intron |
| AAAGTTGTTATAGGTAACAA+TGG | 0.569424 | 6_3:-5205405 | Msa0934930:CDS |
| AAGCAAATTGCACAATCCAA+AGG | 0.574315 | 6_3:+5202874 | None:intergenic |
| GGATTCTCAAGGTTGTAATG+AGG | 0.575464 | 6_3:+5197493 | None:intergenic |
| AATTAAATGTAGCAAGACAT+TGG | 0.578119 | 6_3:+5203305 | None:intergenic |
| ATGACCAGTTAGGATTCTCA+AGG | 0.619755 | 6_3:+5197482 | None:intergenic |
| TTCATGCATGTGTTTCTGAG+TGG | 0.631324 | 6_3:-5205707 | Msa0934930:CDS |
| TTTGTACTATAAAGAAACTG+AGG | 0.640284 | 6_3:-5203341 | Msa0934930:CDS |
| TTTGCAACATAATCATAACA+TGG | 0.646690 | 6_3:+5202913 | None:intergenic |
| TCAACAACATAATCATAACA+TGG | 0.678875 | 6_3:+5205606 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTATTTTTATTTT+AGG | - | chr6_3:5199129-5199148 | Msa0934930:intron | 0.0% |
| !!! | TTTATTTTATTTTTATTTTA+GGG | - | chr6_3:5199130-5199149 | Msa0934930:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6_3:5201949-5201968 | Msa0934930:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr6_3:5201950-5201969 | Msa0934930:intron | 0.0% |
| !! | ATATATATATATATATATAT+TGG | + | chr6_3:5201949-5201968 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr6_3:5201950-5201969 | Msa0934930:intron | 0.0% |
| !! | TTTATATATCAATATATTCA+TGG | + | chr6_3:5199194-5199213 | None:intergenic | 10.0% |
| !! | ACTGATAATAAAAAAAATAA+GGG | + | chr6_3:5199709-5199728 | None:intergenic | 10.0% |
| !! | TTTATGTTTATAAAATTTCT+AGG | - | chr6_3:5200067-5200086 | Msa0934930:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAATC+GGG | - | chr6_3:5202342-5202361 | Msa0934930:intron | 10.0% |
| !! | AAATAAATTTAGATATAGAT+AGG | + | chr6_3:5202480-5202499 | None:intergenic | 10.0% |
| !!! | AAAATTTTTTTTATAGCTTT+TGG | - | chr6_3:5202634-5202653 | Msa0934930:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | - | chr6_3:5202695-5202714 | Msa0934930:intron | 10.0% |
| !! | TAAACATCTTAAATATTAAT+TGG | + | chr6_3:5203391-5203410 | None:intergenic | 10.0% |
| !! | CACAAAAAAAAAAAAAAAAT+TGG | - | chr6_3:5203585-5203604 | Msa0934930:intron | 10.0% |
| !!! | TTAAACTTTTTTTTATTAGT+TGG | - | chr6_3:5203631-5203650 | Msa0934930:intron | 10.0% |
| !!! | TAAACTTTTTTTTATTAGTT+GGG | - | chr6_3:5203632-5203651 | Msa0934930:intron | 10.0% |
| !! | TCAAGTATAATAAATTATAA+AGG | - | chr6_3:5203797-5203816 | Msa0934930:intron | 10.0% |
| !! | CAAGTATAATAAATTATAAA+GGG | - | chr6_3:5203798-5203817 | Msa0934930:intron | 10.0% |
| !!! | GATTTTAGTTAAAATAATAA+GGG | - | chr6_3:5203829-5203848 | Msa0934930:intron | 10.0% |
| !!! | AATTATAAAATTTTGTCTTT+TGG | - | chr6_3:5204233-5204252 | Msa0934930:intron | 10.0% |
| !!! | TAGTTTTAATAAAAAAATTC+TGG | - | chr6_3:5204461-5204480 | Msa0934930:intron | 10.0% |
| !! | AAAAAATAATGAAAAAATTC+TGG | + | chr6_3:5204885-5204904 | None:intergenic | 10.0% |
| !! | ATTAAAAATTGAAAAAATTC+TGG | + | chr6_3:5205038-5205057 | None:intergenic | 10.0% |
| !! | GAAAAAAAATTAAAAAATTC+TGG | + | chr6_3:5205104-5205123 | None:intergenic | 10.0% |
| !! | AAAAATTATAAAAGATTTGT+AGG | - | chr6_3:5205210-5205229 | Msa0934930:intron | 10.0% |
| !! | AAAATTATAAAAGATTTGTA+GGG | - | chr6_3:5205211-5205230 | Msa0934930:intron | 10.0% |
| !! | AAAATAAAATTTGATTGACA+CGG | + | chr6_3:5198916-5198935 | None:intergenic | 15.0% |
| !!! | GTATAAAAGTTTTCAATAAT+GGG | - | chr6_3:5199152-5199171 | Msa0934930:intron | 15.0% |
| !! | TTTAGAAATATTAAATTGTG+TGG | - | chr6_3:5199274-5199293 | Msa0934930:intron | 15.0% |
| !!! | TAATACATAAGAGTATTAAT+TGG | + | chr6_3:5199427-5199446 | None:intergenic | 15.0% |
| !!! | GACAAATATGTTATTTTAAA+TGG | - | chr6_3:5199617-5199636 | Msa0934930:intron | 15.0% |
| !! | CACTGATAATAAAAAAAATA+AGG | + | chr6_3:5199710-5199729 | None:intergenic | 15.0% |
| !!! | TAATTTGTACTAATATTTGT+AGG | - | chr6_3:5200155-5200174 | Msa0934930:intron | 15.0% |
| !! | TAGAGATTAATAATACATAT+TGG | - | chr6_3:5201710-5201729 | Msa0934930:intron | 15.0% |
| !!! | TATTTTTGCATATTCTATTT+TGG | - | chr6_3:5202495-5202514 | Msa0934930:intron | 15.0% |
| !!! | CAAATTTTTTTTATAGCTTT+TGG | - | chr6_3:5202572-5202591 | Msa0934930:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | chr6_3:5202693-5202712 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | chr6_3:5202694-5202713 | None:intergenic | 15.0% |
| !! | AAAATTATAAAAGATTTGCA+GGG | + | chr6_3:5202754-5202773 | None:intergenic | 15.0% |
| !! | AAAAATTATAAAAGATTTGC+AGG | + | chr6_3:5202755-5202774 | None:intergenic | 15.0% |
| !! | AAAAAAAAACCAAAAACTAA+TGG | - | chr6_3:5202912-5202931 | Msa0934930:CDS | 15.0% |
| !!! | TTATTTTTAACTTTGTGTAT+AGG | + | chr6_3:5203525-5203544 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTTTAATTTTCCT+GGG | + | chr6_3:5203624-5203643 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTTTAATTTTCC+TGG | + | chr6_3:5203625-5203644 | None:intergenic | 15.0% |
| !! | TAAATTATAAAGGGTAAATA+TGG | - | chr6_3:5203807-5203826 | Msa0934930:intron | 15.0% |
| !!! | GGATTTTAGTTAAAATAATA+AGG | - | chr6_3:5203828-5203847 | Msa0934930:intron | 15.0% |
| !! | TAAAATAATAAGGGTAAAAA+TGG | - | chr6_3:5203838-5203857 | Msa0934930:intron | 15.0% |
| !! | AAAAAAAAACCAAAAACTAA+CGG | + | chr6_3:5202912-5202931 | None:intergenic | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+TGG | - | chr6_3:5204673-5204692 | Msa0934930:intron | 15.0% |
| !!! | TTTTCATTAGTATTTTTTCT+GGG | - | chr6_3:5204674-5204693 | Msa0934930:intron | 15.0% |
| !!! | AATTAAAAAATTCTGGAAAA+TGG | + | chr6_3:5205058-5205077 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr6_3:5205270-5205289 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr6_3:5205270-5205289 | Msa0934930:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr6_3:5205271-5205290 | Msa0934930:intron | 15.0% |
| !!! | CAAATTTTTTTTATAGCTTT+TGG | + | chr6_3:5202572-5202591 | None:intergenic | 15.0% |
| !!! | CAAATTTTTTTTATAGCTTT+TGG | + | chr6_3:5202572-5202591 | None:intergenic | 15.0% |
| !!! | TTCTATTTTGATTCTTTTTT+TGG | - | chr6_3:5205506-5205525 | Msa0934930:intron | 15.0% |
| !! | AAGAATTTCCAAAATTGATT+TGG | - | chr6_3:5197527-5197546 | Msa0934930:intron | 20.0% |
| !!! | GTGTAATTAACTTGAAAATT+AGG | + | chr6_3:5198790-5198809 | None:intergenic | 20.0% |
| !! | ATTAACCTTATAACAAACTT+AGG | + | chr6_3:5199111-5199130 | None:intergenic | 20.0% |
| !!! | GGTATAAAAGTTTTCAATAA+TGG | - | chr6_3:5199151-5199170 | Msa0934930:intron | 20.0% |
| !!! | ATGAAATTTTAAGTGCATTT+TGG | - | chr6_3:5199235-5199254 | Msa0934930:intron | 20.0% |
| !!! | TGTTAAAAAATAGTACCTTT+TGG | + | chr6_3:5199400-5199419 | None:intergenic | 20.0% |
| !!! | ATATTTGTCATTTGTGTATT+AGG | + | chr6_3:5199606-5199625 | None:intergenic | 20.0% |
| !! | TATATTTGAATGAAATGAGA+AGG | - | chr6_3:5200126-5200145 | Msa0934930:intron | 20.0% |
| !!! | AATGTTAGTTTAGAATTAAG+AGG | - | chr6_3:5200500-5200519 | Msa0934930:intron | 20.0% |
| !!! | AAGAACGATTTAAAATTGAA+GGG | - | chr6_3:5200838-5200857 | Msa0934930:intron | 20.0% |
| !! | TTTCTTTAATTGGAAATATC+CGG | - | chr6_3:5201048-5201067 | Msa0934930:intron | 20.0% |
| !! | ACTAGTAAGTGTTTATATAA+GGG | + | chr6_3:5201333-5201352 | None:intergenic | 20.0% |
| !! | AACTAGTAAGTGTTTATATA+AGG | + | chr6_3:5201334-5201353 | None:intergenic | 20.0% |
| !! | TTATATAAACACTTACTAGT+TGG | - | chr6_3:5201333-5201352 | Msa0934930:intron | 20.0% |
| !! | TATATAAACACTTACTAGTT+GGG | - | chr6_3:5201334-5201353 | Msa0934930:intron | 20.0% |
| !! | AAAGTCTAGTGAAAAAAAAT+TGG | + | chr6_3:5201432-5201451 | None:intergenic | 20.0% |
| !! | CTTGATCTTGATTTATATAT+AGG | - | chr6_3:5201642-5201661 | Msa0934930:intron | 20.0% |
| !!! | GTAACAAATATTGGTTTATT+CGG | - | chr6_3:5201672-5201691 | Msa0934930:intron | 20.0% |
| !!! | GACAAACTATTTTAAATCAA+GGG | + | chr6_3:5201802-5201821 | None:intergenic | 20.0% |
| !!! | TGACAAACTATTTTAAATCA+AGG | + | chr6_3:5201803-5201822 | None:intergenic | 20.0% |
| !!! | TGGAATATATCATTTTATGT+TGG | - | chr6_3:5202276-5202295 | Msa0934930:intron | 20.0% |
| !!! | ATTCTATTTTGGCTAAAATA+TGG | - | chr6_3:5202506-5202525 | Msa0934930:intron | 20.0% |
| !! | AGCTATAAAAAAAATTTGCA+GGG | + | chr6_3:5205332-5205351 | None:intergenic | 20.0% |
| !! | AAGCTATAAAAAAAATTTGC+AGG | + | chr6_3:5205331-5205350 | None:intergenic | 20.0% |
| !!! | GCTATAAAAAAAATTTTGCA+GGG | + | chr6_3:5202631-5202650 | None:intergenic | 20.0% |
| !!! | AGCTATAAAAAAAATTTTGC+AGG | + | chr6_3:5202632-5202651 | None:intergenic | 20.0% |
| !!! | TTTTTTTAACTGAGACTTAA+CGG | + | chr6_3:5202897-5202916 | None:intergenic | 20.0% |
| !! | AAAATAAGATGAGAAAAGAA+AGG | - | chr6_3:5203042-5203061 | Msa0934930:intron | 20.0% |
| !! | TAGTTGTAAATTGACATAAA+AGG | - | chr6_3:5203315-5203334 | Msa0934930:CDS | 20.0% |
| !!! | TTTTTTAAACTGAGACTTAA+CGG | - | chr6_3:5204314-5204333 | Msa0934930:intron | 20.0% |
| !!! | ATTTTTGTGTATTCATAAAG+CGG | - | chr6_3:5204698-5204717 | Msa0934930:intron | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | - | chr6_3:5204732-5204751 | Msa0934930:intron | 20.0% |
| !! | AAGCTATAAAAAAAATTTGC+AGG | - | chr6_3:5205331-5205350 | Msa0934930:intron | 20.0% |
| !! | AGCTATAAAAAAAATTTGCA+GGG | - | chr6_3:5205332-5205351 | Msa0934930:intron | 20.0% |
| !! | AGCTATAAAAAAAATTTGCA+AGG | - | chr6_3:5205332-5205351 | Msa0934930:intron | 20.0% |
| !! | AAAAATAGAAGGCTAAAATA+TGG | + | chr6_3:5205457-5205476 | None:intergenic | 20.0% |
| !! | AAGATTCTCCAAATCAATTT+TGG | + | chr6_3:5197538-5197557 | None:intergenic | 25.0% |
| ! | TCAACAACATAATCATAACA+TGG | + | chr6_3:5197561-5197580 | None:intergenic | 25.0% |
| ! | AAAGTTGTTATAGGTAACAA+TGG | - | chr6_3:5197759-5197778 | Msa0934930:intron | 25.0% |
| ! | TCTATACCAATATTTCAAGA+TGG | + | chr6_3:5197807-5197826 | None:intergenic | 25.0% |
| !! | TTAATCACGTCTAATTTTCA+AGG | - | chr6_3:5198733-5198752 | Msa0934930:intron | 25.0% |
| !!! | TTATGCCTAAGTTTGTTATA+AGG | - | chr6_3:5199103-5199122 | Msa0934930:intron | 25.0% |
| !!! | TAAGTATGGGAATTGATTTT+CGG | + | chr6_3:5199326-5199345 | None:intergenic | 25.0% |
| ! | TGCAAACTAAAAGTTAAAGA+AGG | - | chr6_3:5199467-5199486 | Msa0934930:intron | 25.0% |
| ! | GCAAACTAAAAGTTAAAGAA+GGG | - | chr6_3:5199468-5199487 | Msa0934930:intron | 25.0% |
| ! | AAAAAGTTCACTCTTTCTTA+TGG | - | chr6_3:5199766-5199785 | Msa0934930:intron | 25.0% |
| ! | TTTGTACTATAAAGAAACTG+AGG | - | chr6_3:5199823-5199842 | Msa0934930:intron | 25.0% |
| ! | ATAAAGAAACTGAGGAAAAT+TGG | - | chr6_3:5199831-5199850 | Msa0934930:intron | 25.0% |
| ! | AATTAAATGTAGCAAGACAT+TGG | + | chr6_3:5199862-5199881 | None:intergenic | 25.0% |
| ! | TGTACTAATATTTGTAGGAA+TGG | - | chr6_3:5200160-5200179 | Msa0934930:intron | 25.0% |
| ! | TTTGCAACATAATCATAACA+TGG | + | chr6_3:5200254-5200273 | None:intergenic | 25.0% |
| ! | GATTATGTTGCAAAAGAAAA+TGG | - | chr6_3:5200260-5200279 | Msa0934930:intron | 25.0% |
| ! | TGAAAAATGTGCTTACAAAT+AGG | + | chr6_3:5200353-5200372 | None:intergenic | 25.0% |
| ! | AAAGTTGTTATACGTAACAA+TGG | - | chr6_3:5200455-5200474 | Msa0934930:intron | 25.0% |
| ! | AGAATTACACCTCAAAATTA+TGG | - | chr6_3:5200733-5200752 | Msa0934930:intron | 25.0% |
| !! | GAAGAACGATTTAAAATTGA+AGG | - | chr6_3:5200837-5200856 | Msa0934930:intron | 25.0% |
| ! | ATATAAACACTTACTAGTTG+GGG | - | chr6_3:5201335-5201354 | Msa0934930:intron | 25.0% |
| ! | AGAAATTATCCCATCTAATA+TGG | - | chr6_3:5201519-5201538 | Msa0934930:intron | 25.0% |
| !! | TACTCTTTTCAATGAAAAAG+TGG | - | chr6_3:5201580-5201599 | Msa0934930:intron | 25.0% |
| !!! | AAAAGTGGCTAATATTTTGA+AGG | - | chr6_3:5201595-5201614 | Msa0934930:intron | 25.0% |
| ! | GGAAAAGAAGTAACAAATAT+TGG | - | chr6_3:5201663-5201682 | Msa0934930:intron | 25.0% |
| !!! | TTTTGGCTAAAATATGGTTT+TGG | - | chr6_3:5202512-5202531 | Msa0934930:intron | 25.0% |
| !!! | AAAACTGACATATTTTTGCA+AGG | + | chr6_3:5205243-5205262 | None:intergenic | 25.0% |
| !! | TTTAGGTTTAAATGTGTGTT+TGG | - | chr6_3:5202775-5202794 | Msa0934930:CDS | 25.0% |
| !! | GATAAGCTAATTAAAGTGTT+TGG | - | chr6_3:5203267-5203286 | Msa0934930:CDS | 25.0% |
| !! | AAAGTGTTTGGTAAAATTAG+CGG | - | chr6_3:5203279-5203298 | Msa0934930:CDS | 25.0% |
| ! | TTATAAGCTATAAGCTCATT+TGG | - | chr6_3:5204013-5204032 | Msa0934930:intron | 25.0% |
| ! | AAGAAAGAAAGAAGAAAACA+CGG | + | chr6_3:5204156-5204175 | None:intergenic | 25.0% |
| !! | CTTGCAGTTTGTAAAATTTT+TGG | + | chr6_3:5204351-5204370 | None:intergenic | 25.0% |
| ! | AAAAGGTTTAAATGTGTGTT+TGG | + | chr6_3:5204436-5204455 | None:intergenic | 25.0% |
| ! | TATTTGTAAACCGAGAATAA+GGG | - | chr6_3:5204589-5204608 | Msa0934930:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | + | chr6_3:5204602-5204621 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACCTAAGCT+CGG | + | chr6_3:5204637-5204656 | None:intergenic | 25.0% |
| !! | TTTTTGTGTATTCATAAAGC+GGG | - | chr6_3:5204699-5204718 | Msa0934930:intron | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | - | chr6_3:5204731-5204750 | Msa0934930:intron | 25.0% |
| !!! | TGTATTTTTTCCCTTATTCT+CGG | + | chr6_3:5204745-5204764 | None:intergenic | 25.0% |
| !!! | AAAACTGACATATTTTTGCA+GGG | - | chr6_3:5205243-5205262 | Msa0934930:intron | 25.0% |
| !!! | TTTTAGCCTTCTATTTTTGA+AGG | - | chr6_3:5205459-5205478 | Msa0934930:CDS | 25.0% |
| ! | ACTATTCCTTCAAAAATAGA+AGG | + | chr6_3:5205468-5205487 | None:intergenic | 25.0% |
| ! | TATTGATTGTGCAATTTGCT+TGG | - | chr6_3:5197596-5197615 | Msa0934930:intron | 30.0% |
| TGAAAACTATGCTTGCAAAT+AGG | + | chr6_3:5197657-5197676 | None:intergenic | 30.0% | |
| GATCTACAAATTGGACAAAT+GGG | + | chr6_3:5197714-5197733 | None:intergenic | 30.0% | |
| AGATCTACAAATTGGACAAA+TGG | + | chr6_3:5197715-5197734 | None:intergenic | 30.0% | |
| CCAATCATAGATCTACAAAT+TGG | + | chr6_3:5197723-5197742 | None:intergenic | 30.0% | |
| CCAATTTGTAGATCTATGAT+TGG | - | chr6_3:5197720-5197739 | Msa0934930:intron | 30.0% | |
| AGAAATTATGTTTACCGCAA+GGG | + | chr6_3:5197927-5197946 | None:intergenic | 30.0% | |
| AAGAAATTATGTTTACCGCA+AGG | + | chr6_3:5197928-5197947 | None:intergenic | 30.0% | |
| TATATTTCATCTCTCTTGCA+TGG | - | chr6_3:5197980-5197999 | Msa0934930:intron | 30.0% | |
| AGTGTTAAAACACTTGATAG+AGG | + | chr6_3:5198006-5198025 | None:intergenic | 30.0% | |
| !! | CTACAACTTGTTAGTTTAGT+TGG | - | chr6_3:5198024-5198043 | Msa0934930:intron | 30.0% |
| TTAAAAAACAGTTCGACACT+TGG | - | chr6_3:5198099-5198118 | Msa0934930:intron | 30.0% | |
| TAAAAAACAGTTCGACACTT+GGG | - | chr6_3:5198100-5198119 | Msa0934930:intron | 30.0% | |
| ACATGTGTCTAATATGAACT+TGG | + | chr6_3:5198576-5198595 | None:intergenic | 30.0% | |
| GTGTCTAATATGAATGAACT+CGG | + | chr6_3:5198638-5198657 | None:intergenic | 30.0% | |
| ACATGTGTCTAATATGAACT+CGG | + | chr6_3:5198576-5198595 | None:intergenic | 30.0% | |
| TCAAGTTAATTACACTCAGT+TGG | - | chr6_3:5198795-5198814 | Msa0934930:intron | 30.0% | |
| AGAGAATGTTTATGCCTAAA+AGG | - | chr6_3:5199008-5199027 | Msa0934930:intron | 30.0% | |
| ! | CGATAATCTACTATCCTTTT+AGG | + | chr6_3:5199025-5199044 | None:intergenic | 30.0% |
| AAAGGATAGTAGATTATCGA+AGG | - | chr6_3:5199026-5199045 | Msa0934930:intron | 30.0% | |
| !! | CTTGGTGTTATGATAAGTAT+GGG | + | chr6_3:5199339-5199358 | None:intergenic | 30.0% |
| !! | ACTTGGTGTTATGATAAGTA+TGG | + | chr6_3:5199340-5199359 | None:intergenic | 30.0% |
| !! | TTTTGGTTGAGTGTAGTAAA+GGG | + | chr6_3:5199383-5199402 | None:intergenic | 30.0% |
| GAAGGGAATTAATGAGAAAA+AGG | - | chr6_3:5199485-5199504 | Msa0934930:intron | 30.0% | |
| ! | CAAGTTGAAGCAAAAAATCA+CGG | + | chr6_3:5199534-5199553 | None:intergenic | 30.0% |
| AACAATGAACCTATTGTATG+AGG | + | chr6_3:5199656-5199675 | None:intergenic | 30.0% | |
| ! | TTTTCTCGTCTTTAACTCTT+TGG | + | chr6_3:5199750-5199769 | None:intergenic | 30.0% |
| ACTCAAAAGGTGACAAAAAA+AGG | - | chr6_3:5199917-5199936 | Msa0934930:intron | 30.0% | |
| AAGCATTTCCAAAACTGATT+TGG | - | chr6_3:5200220-5200239 | Msa0934930:intron | 30.0% | |
| GATCTACAAATAGGACAAAT+TGG | + | chr6_3:5200410-5200429 | None:intergenic | 30.0% | |
| AAAACAACAACTTCTTATGC+TGG | + | chr6_3:5200533-5200552 | None:intergenic | 30.0% | |
| ATTATACCGAACGAAATTAC+TGG | - | chr6_3:5200564-5200583 | Msa0934930:intron | 30.0% | |
| TTATACCGAACGAAATTACT+GGG | - | chr6_3:5200565-5200584 | Msa0934930:intron | 30.0% | |
| ! | ACGATTGAACCATAATTTTG+AGG | + | chr6_3:5200745-5200764 | None:intergenic | 30.0% |
| TAAGTGTTTATATAAGGGTG+GGG | + | chr6_3:5201328-5201347 | None:intergenic | 30.0% | |
| GTAAGTGTTTATATAAGGGT+GGG | + | chr6_3:5201329-5201348 | None:intergenic | 30.0% | |
| AGTAAGTGTTTATATAAGGG+TGG | + | chr6_3:5201330-5201349 | None:intergenic | 30.0% | |
| TGTAAAGTTGCAACTATCTA+AGG | - | chr6_3:5201889-5201908 | Msa0934930:intron | 30.0% | |
| GTAAAGTTGCAACTATCTAA+GGG | - | chr6_3:5201890-5201909 | Msa0934930:intron | 30.0% | |
| ! | ATAGAAGACACATTTTGTGA+AGG | - | chr6_3:5202040-5202059 | Msa0934930:intron | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr6_3:5202102-5202121 | Msa0934930:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr6_3:5202108-5202127 | None:intergenic | 30.0% | |
| AAAGTGAAAATCACACCTTA+AGG | - | chr6_3:5202150-5202169 | Msa0934930:intron | 30.0% | |
| ! | TTTTATCAAGTCACACCTTA+AGG | + | chr6_3:5202168-5202187 | None:intergenic | 30.0% |
| !! | ACAATGATTTGCTTGTTAGA+TGG | - | chr6_3:5202394-5202413 | Msa0934930:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr6_3:5205364-5205383 | None:intergenic | 30.0% |
| ! | CAAAATTGGGTAAAAGTGTA+GGG | + | chr6_3:5204409-5204428 | None:intergenic | 30.0% |
| !! | CTTTTACCCAATTTTGGTAT+TGG | - | chr6_3:5202806-5202825 | Msa0934930:CDS | 30.0% |
| ! | CAAAAGTTTTACAAACTGCA+GGG | + | chr6_3:5202862-5202881 | None:intergenic | 30.0% |
| TACAATCGGTTATATGAAGT+GGG | + | chr6_3:5203073-5203092 | None:intergenic | 30.0% | |
| TGTCATTACATGAAACGAAA+TGG | - | chr6_3:5203674-5203693 | Msa0934930:intron | 30.0% | |
| AAAAATAGCTTATAAGCTCG+TGG | - | chr6_3:5203918-5203937 | Msa0934930:intron | 30.0% | |
| TTGACAAAATAAGCTCTGTT+TGG | + | chr6_3:5203987-5204006 | None:intergenic | 30.0% | |
| AGAAAGAAAGAAGAAAACAC+GGG | + | chr6_3:5204155-5204174 | None:intergenic | 30.0% | |
| !! | CTTTTACCCAATTTTGGTAT+TGG | + | chr6_3:5202806-5202825 | None:intergenic | 30.0% |
| ! | CAAAATTGGGTAAAAGTGTA+GGG | - | chr6_3:5204409-5204428 | Msa0934930:intron | 30.0% |
| GTATTTGTAAACCGAGAATA+AGG | - | chr6_3:5204588-5204607 | Msa0934930:intron | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | - | chr6_3:5204622-5204641 | Msa0934930:intron | 30.0% | |
| ATGTCGAAATTTCGAAATTC+TGG | + | chr6_3:5204834-5204853 | None:intergenic | 30.0% | |
| !! | CAAAACTGACATATTTTTGC+AGG | - | chr6_3:5205242-5205261 | Msa0934930:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr6_3:5205364-5205383 | Msa0934930:intron | 30.0% |
| TCAAGAGTCTAACCTATTAA+CGG | - | chr6_3:5205581-5205600 | Msa0934930:CDS | 30.0% | |
| AAGAGGAGCAATGATTGATA+GGG | - | chr6_3:5197497-5197516 | Msa0934930:CDS | 35.0% | |
| TGCTTGGAGAATTTCACTAT+TGG | - | chr6_3:5197612-5197631 | Msa0934930:intron | 35.0% | |
| GCTTGGAGAATTTCACTATT+GGG | - | chr6_3:5197613-5197632 | Msa0934930:intron | 35.0% | |
| CTTGGAGAATTTCACTATTG+GGG | - | chr6_3:5197614-5197633 | Msa0934930:intron | 35.0% | |
| ! | TAGTTTTCATGCTCAATGTG+TGG | - | chr6_3:5197668-5197687 | Msa0934930:intron | 35.0% |
| ! | TCTATGATTGGTTCTCATAG+TGG | - | chr6_3:5197732-5197751 | Msa0934930:intron | 35.0% |
| AGTGGAGACAAAGTTGTTAT+AGG | - | chr6_3:5197750-5197769 | Msa0934930:intron | 35.0% | |
| GGAAGAGAAATCATAGAAAG+TGG | - | chr6_3:5197780-5197799 | Msa0934930:intron | 35.0% | |
| AGTGGTCCATCTTGAAATAT+TGG | - | chr6_3:5197798-5197817 | Msa0934930:intron | 35.0% | |
| ATTTAGTGTTCGAGTCTCTA+TGG | - | chr6_3:5198249-5198268 | Msa0934930:intron | 35.0% | |
| ! | AGTCTCTATGGTGCTAATTT+GGG | - | chr6_3:5198261-5198280 | Msa0934930:intron | 35.0% |
| TTACATTCTCGAGAACACAT+TGG | - | chr6_3:5198984-5199003 | Msa0934930:intron | 35.0% | |
| TCACATTCTCGAGAATACAT+TGG | - | chr6_3:5199070-5199089 | Msa0934930:intron | 35.0% | |
| TGCTAGTCAACTATAGAACT+TGG | + | chr6_3:5199357-5199376 | None:intergenic | 35.0% | |
| TTTGGTTGAGTGTAGTAAAG+GGG | + | chr6_3:5199382-5199401 | None:intergenic | 35.0% | |
| !! | CTTTTGGTTGAGTGTAGTAA+AGG | + | chr6_3:5199384-5199403 | None:intergenic | 35.0% |
| CTTTACTACACTCAACCAAA+AGG | - | chr6_3:5199382-5199401 | Msa0934930:intron | 35.0% | |
| TCATTTGTGTATTAGGTGAC+TGG | + | chr6_3:5199599-5199618 | None:intergenic | 35.0% | |
| TTCCTCAATCAAGACTCAAA+AGG | - | chr6_3:5199904-5199923 | Msa0934930:intron | 35.0% | |
| ! | AAGCTTCTCCAAATCAGTTT+TGG | + | chr6_3:5200231-5200250 | None:intergenic | 35.0% |
| AGAAAATGGAAGTAACCCTT+TGG | - | chr6_3:5200274-5200293 | Msa0934930:intron | 35.0% | |
| AGCAAATTGCACAATCCAAA+GGG | + | chr6_3:5200292-5200311 | None:intergenic | 35.0% | |
| AAGCAAATTGCACAATCCAA+AGG | + | chr6_3:5200293-5200312 | None:intergenic | 35.0% | |
| ! | TTTGGATTGTGCAATTTGCT+TGG | - | chr6_3:5200292-5200311 | Msa0934930:intron | 35.0% |
| TGCTTGGAGAATTTCACTAT+TGG | - | chr6_3:5197612-5197631 | Msa0934930:intron | 35.0% | |
| GCTTGGAGAATTTCACTATT+GGG | - | chr6_3:5197613-5197632 | Msa0934930:intron | 35.0% | |
| CTTGGAGAATTTCACTATTG+GGG | - | chr6_3:5197614-5197633 | Msa0934930:intron | 35.0% | |
| ! | CATTTTTCATGCTCAATGTG+TGG | - | chr6_3:5200364-5200383 | Msa0934930:intron | 35.0% |
| TTTGTCCTATTTGTAGATCC+AGG | - | chr6_3:5200411-5200430 | Msa0934930:intron | 35.0% | |
| TTGTCCTATTTGTAGATCCA+GGG | - | chr6_3:5200412-5200431 | Msa0934930:intron | 35.0% | |
| ACGTAACAATGGAAGAGAAA+TGG | - | chr6_3:5200466-5200485 | Msa0934930:intron | 35.0% | |
| TATACTCGTAACAGTGATCT+GGG | + | chr6_3:5200689-5200708 | None:intergenic | 35.0% | |
| ATATACTCGTAACAGTGATC+TGG | + | chr6_3:5200690-5200709 | None:intergenic | 35.0% | |
| ! | AGCATCAACTGTGAGATTTT+TGG | - | chr6_3:5200884-5200903 | Msa0934930:intron | 35.0% |
| !! | TTTTTGGTGTGAAGAATGAG+TGG | - | chr6_3:5200900-5200919 | Msa0934930:intron | 35.0% |
| !! | TTTTGGTGTGAAGAATGAGT+GGG | - | chr6_3:5200901-5200920 | Msa0934930:intron | 35.0% |
| ! | GCAAACGCGTTTTCTTTAAT+TGG | - | chr6_3:5201038-5201057 | Msa0934930:intron | 35.0% |
| GACTTAAAAATGTCCCACAT+TGG | + | chr6_3:5201368-5201387 | None:intergenic | 35.0% | |
| ACTATGAGAAACTAGTGTGT+GGG | + | chr6_3:5201396-5201415 | None:intergenic | 35.0% | |
| TCTTGTGATTCTACTTCTGT+TGG | + | chr6_3:5201465-5201484 | None:intergenic | 35.0% | |
| ! | GAATCACAAGAGCATGAATT+AGG | - | chr6_3:5201474-5201493 | Msa0934930:intron | 35.0% |
| ! | ACAAGAGCATGAATTAGGTA+AGG | - | chr6_3:5201479-5201498 | Msa0934930:intron | 35.0% |
| CATGAATTAGGTAAGGCATA+GGG | - | chr6_3:5201486-5201505 | Msa0934930:intron | 35.0% | |
| !! | AGTGGCTAATATTTTGAAGG+TGG | - | chr6_3:5201598-5201617 | Msa0934930:intron | 35.0% |
| TTGATAAAAGACACCACCAA+AGG | - | chr6_3:5202179-5202198 | Msa0934930:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | - | chr6_3:5202180-5202199 | Msa0934930:intron | 35.0% | |
| TGTTCAACTCAGCAATCAAT+GGG | + | chr6_3:5202377-5202396 | None:intergenic | 35.0% | |
| TTGTTCAACTCAGCAATCAA+TGG | + | chr6_3:5202378-5202397 | None:intergenic | 35.0% | |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr6_3:5205363-5205382 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr6_3:5202598-5202617 | Msa0934930:intron | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | + | chr6_3:5205303-5205322 | None:intergenic | 35.0% |
| ! | CCAAAATTGGGTAAAAGTGT+AGG | + | chr6_3:5204408-5204427 | None:intergenic | 35.0% |
| ! | CCTACACTTTTACCCAATTT+TGG | - | chr6_3:5202800-5202819 | Msa0934930:CDS | 35.0% |
| !!! | CGCTTGTTTTTATTTGGCAT+TGG | - | chr6_3:5202835-5202854 | Msa0934930:CDS | 35.0% |
| ! | CCAAAAGTTTTACAAACTGC+AGG | + | chr6_3:5202863-5202882 | None:intergenic | 35.0% |
| ! | CCTGCAGTTTGTAAAACTTT+TGG | - | chr6_3:5202860-5202879 | Msa0934930:CDS | 35.0% |
| TTTAACTGAGACTTAACGGA+AGG | + | chr6_3:5202893-5202912 | None:intergenic | 35.0% | |
| GTACAATCGGTTATATGAAG+TGG | + | chr6_3:5203074-5203093 | None:intergenic | 35.0% | |
| !! | AACAGACTTGGTGAAAAAGA+GGG | + | chr6_3:5203124-5203143 | None:intergenic | 35.0% |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr6_3:5203160-5203179 | Msa0934930:intron | 35.0% | |
| TAAGCTATAAGCTCATTTGG+TGG | - | chr6_3:5204016-5204035 | Msa0934930:intron | 35.0% | |
| AAGCTATAAGCTCATTTGGT+GGG | - | chr6_3:5204017-5204036 | Msa0934930:intron | 35.0% | |
| TTAAACTGAGACTTAACGGA+AGG | - | chr6_3:5204318-5204337 | Msa0934930:intron | 35.0% | |
| !!! | CGCTTTTTTTTGTTTGGCAT+TGG | + | chr6_3:5204376-5204395 | None:intergenic | 35.0% |
| ! | CCTACACTTTTACCCAATTT+TGG | + | chr6_3:5202800-5202819 | None:intergenic | 35.0% |
| ! | CCAAAATTGGGTAAAAGTGT+AGG | - | chr6_3:5204408-5204427 | Msa0934930:intron | 35.0% |
| ! | ATTCATAAAGCGGGAACTTT+TGG | - | chr6_3:5204708-5204727 | Msa0934930:intron | 35.0% |
| ! | TTCATAAAGCGGGAACTTTT+GGG | - | chr6_3:5204709-5204728 | Msa0934930:intron | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | - | chr6_3:5205303-5205322 | Msa0934930:intron | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr6_3:5202598-5202617 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr6_3:5205363-5205382 | Msa0934930:intron | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | - | chr6_3:5205424-5205443 | Msa0934930:CDS | 35.0% |
| ACTAGTGAACTTGTGTATGT+TGG | - | chr6_3:5205551-5205570 | Msa0934930:CDS | 35.0% | |
| CAAGAGTCTAACCTATTAAC+GGG | - | chr6_3:5205582-5205601 | Msa0934930:CDS | 35.0% | |
| TCTTCGAGTGAATTTGAACT+CGG | + | chr6_3:5205608-5205627 | None:intergenic | 35.0% | |
| TGTAATGAGGAGACACAAAT+AGG | + | chr6_3:5205661-5205680 | None:intergenic | 35.0% | |
| ! | TTCATGCATGTGTTTCTGAG+TGG | - | chr6_3:5197457-5197476 | Msa0934930:CDS | 40.0% |
| !! | TCTGAGTGGTTTTCTAGAAG+TGG | - | chr6_3:5197471-5197490 | Msa0934930:CDS | 40.0% |
| !! | TTTTCTAGAAGTGGAGGAAG+AGG | - | chr6_3:5197480-5197499 | Msa0934930:CDS | 40.0% |
| GAAGAGGAGCAATGATTGAT+AGG | - | chr6_3:5197496-5197515 | Msa0934930:CDS | 40.0% | |
| AGAGGAGCAATGATTGATAG+GGG | - | chr6_3:5197498-5197517 | Msa0934930:CDS | 40.0% | |
| ATGCTCAATGTGTGGATCAA+TGG | - | chr6_3:5197676-5197695 | Msa0934930:intron | 40.0% | |
| !! | TTGACCTAGTGGTATTGACT+TGG | - | chr6_3:5198123-5198142 | Msa0934930:intron | 40.0% |
| !! | TGACCTAGTGGTATTGACTT+GGG | - | chr6_3:5198124-5198143 | Msa0934930:intron | 40.0% |
| ! | AGTATCTCTGGTGCCAATTT+GGG | - | chr6_3:5198184-5198203 | Msa0934930:intron | 40.0% |
| CTAAATTACCCCACCCAAAT+TGG | + | chr6_3:5198200-5198219 | None:intergenic | 40.0% | |
| ! | GAGTCTCTATGGTGCTAATT+TGG | - | chr6_3:5198260-5198279 | Msa0934930:intron | 40.0% |
| ! | TCTATGGTGCTAATTTGGGT+GGG | - | chr6_3:5198265-5198284 | Msa0934930:intron | 40.0% |
| ! | GTGGGCTAATTTAGCTTCTT+GGG | - | chr6_3:5198283-5198302 | Msa0934930:intron | 40.0% |
| ! | GCTAATTTAGCTTCTTGGGT+GGG | - | chr6_3:5198287-5198306 | Msa0934930:intron | 40.0% |
| TTGGTTGAGTGTAGTAAAGG+GGG | + | chr6_3:5199381-5199400 | None:intergenic | 40.0% | |
| TTGTGTATTAGGTGACTGGA+AGG | + | chr6_3:5199595-5199614 | None:intergenic | 40.0% | |
| CTTGAGTCACCTCATACAAT+AGG | - | chr6_3:5199644-5199663 | Msa0934930:intron | 40.0% | |
| TGAGGAAATTCTTCTGCTTC+TGG | + | chr6_3:5199891-5199910 | None:intergenic | 40.0% | |
| !! | CACCTTTTGAGTCTTGATTG+AGG | + | chr6_3:5199909-5199928 | None:intergenic | 40.0% |
| ATGCTCAATGTGTGGATAAG+TGG | - | chr6_3:5200372-5200391 | Msa0934930:intron | 40.0% | |
| CAAACCCTGGATCTACAAAT+AGG | + | chr6_3:5200419-5200438 | None:intergenic | 40.0% | |
| ACTCACCCAGTAATTTCGTT+CGG | + | chr6_3:5200573-5200592 | None:intergenic | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | chr6_3:5200605-5200624 | Msa0934930:intron | 40.0% |
| AGTCTACCTTGCACAAACTA+GGG | + | chr6_3:5200636-5200655 | None:intergenic | 40.0% | |
| TAGTCTACCTTGCACAAACT+AGG | + | chr6_3:5200637-5200656 | None:intergenic | 40.0% | |
| ! | TTTGGTGTGAAGAATGAGTG+GGG | - | chr6_3:5200902-5200921 | Msa0934930:intron | 40.0% |
| AGAGTTCGCGAGAATTACTT+GGG | - | chr6_3:5200947-5200966 | Msa0934930:intron | 40.0% | |
| AAACGCGTTTGCTTTGCTTA+AGG | + | chr6_3:5201030-5201049 | None:intergenic | 40.0% | |
| TGGAAATATCCGGAAGTTTC+TGG | - | chr6_3:5201058-5201077 | Msa0934930:intron | 40.0% | |
| AACCAGTATCCAGAAACTTC+CGG | + | chr6_3:5201070-5201089 | None:intergenic | 40.0% | |
| ! | GAAGTTTCTGGATACTGGTT+TGG | - | chr6_3:5201070-5201089 | Msa0934930:intron | 40.0% |
| !! | TTCTGGATACTGGTTTGGAT+CGG | - | chr6_3:5201075-5201094 | Msa0934930:intron | 40.0% |
| GTTCACCCGTTCACAAAAAT+GGG | - | chr6_3:5201274-5201293 | Msa0934930:intron | 40.0% | |
| CACTATGAGAAACTAGTGTG+TGG | + | chr6_3:5201397-5201416 | None:intergenic | 40.0% | |
| GCATGAATTAGGTAAGGCAT+AGG | - | chr6_3:5201485-5201504 | Msa0934930:intron | 40.0% | |
| CGTAGCTAGCCATATTAGAT+GGG | + | chr6_3:5201531-5201550 | None:intergenic | 40.0% | |
| TCGTAGCTAGCCATATTAGA+TGG | + | chr6_3:5201532-5201551 | None:intergenic | 40.0% | |
| GGTCCTTATGTTGTAGAGAT+TGG | - | chr6_3:5201911-5201930 | Msa0934930:intron | 40.0% | |
| GCTCCAATCTCTACAACATA+AGG | + | chr6_3:5201917-5201936 | None:intergenic | 40.0% | |
| TTATGTTACAAGCCACCCTT+TGG | + | chr6_3:5202198-5202217 | None:intergenic | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr6_3:5202539-5202558 | None:intergenic | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | - | chr6_3:5202588-5202607 | Msa0934930:intron | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | - | chr6_3:5202588-5202607 | Msa0934930:intron | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | + | chr6_3:5205302-5205321 | None:intergenic | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | - | chr6_3:5202660-5202679 | Msa0934930:intron | 40.0% |
| CAGGGACCAATACCAAAATT+GGG | + | chr6_3:5204396-5204415 | None:intergenic | 40.0% | |
| !!! | TCCCTGCGCTTGTTTTTATT+TGG | - | chr6_3:5202829-5202848 | Msa0934930:CDS | 40.0% |
| GCCAAATAAAAACAAGCGCA+GGG | + | chr6_3:5202833-5202852 | None:intergenic | 40.0% | |
| TGCCAAATAAAAACAAGCGC+AGG | + | chr6_3:5202834-5202853 | None:intergenic | 40.0% | |
| !!! | ACGTGCACACCATTAGTTTT+TGG | + | chr6_3:5202924-5202943 | None:intergenic | 40.0% |
| AAAAACTAATGGTGTGCACG+TGG | - | chr6_3:5202923-5202942 | Msa0934930:CDS | 40.0% | |
| TTCAGTTCTGCTGGTACAAT+CGG | + | chr6_3:5203087-5203106 | None:intergenic | 40.0% | |
| GATTCAAAGTTCAGTTCTGC+TGG | + | chr6_3:5203096-5203115 | None:intergenic | 40.0% | |
| !! | ACAGACTTGGTGAAAAAGAG+GGG | + | chr6_3:5203123-5203142 | None:intergenic | 40.0% |
| !! | CAACAGACTTGGTGAAAAAG+AGG | + | chr6_3:5203125-5203144 | None:intergenic | 40.0% |
| ! | TTGGTAGTCAGTATATACCC+AGG | - | chr6_3:5203604-5203623 | Msa0934930:intron | 40.0% |
| CTATAAGCTCAAACGCTACT+TGG | - | chr6_3:5203884-5203903 | Msa0934930:intron | 40.0% | |
| AAACCATTCTCCGTTCTCTT+CGG | + | chr6_3:5204057-5204076 | None:intergenic | 40.0% | |
| AAGAAAACACGGGAAAGAGA+AGG | + | chr6_3:5204145-5204164 | None:intergenic | 40.0% | |
| ACCAATAATAACACGCCACA+TGG | + | chr6_3:5204263-5204282 | None:intergenic | 40.0% | |
| ! | TGCCAAACAAAAAAAAGCGC+AGG | - | chr6_3:5204377-5204396 | Msa0934930:intron | 40.0% |
| ! | GCCAAACAAAAAAAAGCGCA+GGG | - | chr6_3:5204378-5204397 | Msa0934930:intron | 40.0% |
| !!! | TCCCTGCGCTTTTTTTTGTT+TGG | + | chr6_3:5204382-5204401 | None:intergenic | 40.0% |
| CAGGGACCAATACCAAAATT+GGG | - | chr6_3:5204396-5204415 | Msa0934930:intron | 40.0% | |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | + | chr6_3:5202660-5202679 | None:intergenic | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | - | chr6_3:5205302-5205321 | Msa0934930:intron | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | + | chr6_3:5202588-5202607 | None:intergenic | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | + | chr6_3:5202588-5202607 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | + | chr6_3:5205426-5205445 | None:intergenic | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | - | chr6_3:5205423-5205442 | Msa0934930:CDS | 40.0% |
| !! | GGTTTTGATCCCTGCAAAAT+AGG | + | chr6_3:5205436-5205455 | None:intergenic | 40.0% |
| GGATTCTCAAGGTTGTAATG+AGG | + | chr6_3:5205674-5205693 | None:intergenic | 40.0% | |
| ACAACCTTGAGAATCCTAAC+TGG | - | chr6_3:5205678-5205697 | Msa0934930:CDS | 40.0% | |
| ATGACCAGTTAGGATTCTCA+AGG | + | chr6_3:5205685-5205704 | None:intergenic | 40.0% | |
| TGTTTGCAACATGACCAGTT+AGG | + | chr6_3:5205695-5205714 | None:intergenic | 40.0% | |
| !! | GAGTGGTTTTCTAGAAGTGG+AGG | - | chr6_3:5197474-5197493 | Msa0934930:CDS | 45.0% |
| CTAAGTGATGTAGTCCCTTG+CGG | - | chr6_3:5197910-5197929 | Msa0934930:intron | 45.0% | |
| AGTCCCAAGTCAATACCACT+AGG | + | chr6_3:5198130-5198149 | None:intergenic | 45.0% | |
| !! | AGTGGTATTGACTTGGGACT+TGG | - | chr6_3:5198130-5198149 | Msa0934930:intron | 45.0% |
| !! | GTGGTATTGACTTGGGACTT+GGG | - | chr6_3:5198131-5198150 | Msa0934930:intron | 45.0% |
| TACTCGAACTTGAGACCTTG+AGG | + | chr6_3:5198168-5198187 | None:intergenic | 45.0% | |
| GTCTCAAGTTCGAGTATCTC+TGG | - | chr6_3:5198172-5198191 | Msa0934930:intron | 45.0% | |
| ! | GAGTATCTCTGGTGCCAATT+TGG | - | chr6_3:5198183-5198202 | Msa0934930:intron | 45.0% |
| ! | CTCTATGGTGCTAATTTGGG+TGG | - | chr6_3:5198264-5198283 | Msa0934930:intron | 45.0% |
| !! | GGTGGGCTAATTTAGCTTCT+TGG | - | chr6_3:5198282-5198301 | Msa0934930:intron | 45.0% |
| ! | GGCTAATTTAGCTTCTTGGG+TGG | - | chr6_3:5198286-5198305 | Msa0934930:intron | 45.0% |
| TTAGGTGACTGGAAGGTTGA+TGG | + | chr6_3:5199588-5199607 | None:intergenic | 45.0% | |
| ACGTCTTAAAGAAAGCGACC+TGG | + | chr6_3:5200601-5200620 | None:intergenic | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | chr6_3:5200675-5200694 | None:intergenic | 45.0% |
| TTGATCGAAGCCACTCGATA+CGG | - | chr6_3:5200765-5200784 | Msa0934930:intron | 45.0% | |
| TCTACTCCTTTCTGTCCCAT+CGG | + | chr6_3:5200813-5200832 | None:intergenic | 45.0% | |
| GAGAAGAGAGAAAATCGCAC+AGG | - | chr6_3:5200860-5200879 | Msa0934930:intron | 45.0% | |
| TTGGTGTGAAGAATGAGTGG+GGG | - | chr6_3:5200903-5200922 | Msa0934930:intron | 45.0% | |
| TCGCGAACTCTGCCTATAAA+AGG | + | chr6_3:5200938-5200957 | None:intergenic | 45.0% | |
| CAGAGTTCGCGAGAATTACT+TGG | - | chr6_3:5200946-5200965 | Msa0934930:intron | 45.0% | |
| GAGTTCGCGAGAATTACTTG+GGG | - | chr6_3:5200948-5200967 | Msa0934930:intron | 45.0% | |
| GCGTAAAACGCGTTTGCTTA+AGG | + | chr6_3:5200980-5200999 | None:intergenic | 45.0% | |
| ! | ATCCGGAAGTTTCTGGATAC+TGG | - | chr6_3:5201065-5201084 | Msa0934930:intron | 45.0% |
| !! | TCTGGATACTGGTTTGGATC+GGG | - | chr6_3:5201076-5201095 | Msa0934930:intron | 45.0% |
| CGTTCACCCGTTCACAAAAA+TGG | - | chr6_3:5201273-5201292 | Msa0934930:intron | 45.0% | |
| !! | GGGTACCCATTTTTGTGAAC+GGG | + | chr6_3:5201282-5201301 | None:intergenic | 45.0% |
| !! | GGGGTACCCATTTTTGTGAA+CGG | + | chr6_3:5201283-5201302 | None:intergenic | 45.0% |
| TCACAAAAATGGGTACCCCA+AGG | - | chr6_3:5201284-5201303 | Msa0934930:intron | 45.0% | |
| CACAAAAATGGGTACCCCAA+GGG | - | chr6_3:5201285-5201304 | Msa0934930:intron | 45.0% | |
| GAATTAGGTAAGGCATAGGG+AGG | - | chr6_3:5201489-5201508 | Msa0934930:intron | 45.0% | |
| ! | TAATATGGCTAGCTACGACG+TGG | - | chr6_3:5201534-5201553 | Msa0934930:intron | 45.0% |
| TAGCTACGACGTGGTGTATT+TGG | - | chr6_3:5201543-5201562 | Msa0934930:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr6_3:5202183-5202202 | Msa0934930:intron | 45.0% | |
| !! | GGTTTTGGTCCCTGCAAAAT+AGG | - | chr6_3:5202527-5202546 | Msa0934930:intron | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr6_3:5202540-5202559 | None:intergenic | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr6_3:5202537-5202556 | Msa0934930:intron | 45.0% |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr6_3:5205288-5205307 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr6_3:5205288-5205307 | None:intergenic | 45.0% | |
| GCAGGGACCAATACCAAAAT+TGG | + | chr6_3:5204395-5204414 | None:intergenic | 45.0% | |
| ! | TTGTCTTTTAGTGTGCCACG+TGG | + | chr6_3:5202964-5202983 | None:intergenic | 45.0% |
| TCATGAAGCAGCAAAAGCAG+AGG | - | chr6_3:5204101-5204120 | Msa0934930:intron | 45.0% | |
| CAAAAGCAGAGGAACTGGAA+CGG | - | chr6_3:5204112-5204131 | Msa0934930:intron | 45.0% | |
| !! | TTGTCTTTTGGTGTGCCATG+TGG | - | chr6_3:5204245-5204264 | Msa0934930:intron | 45.0% |
| ! | GCCATGTGGCGTGTTATTAT+TGG | - | chr6_3:5204259-5204278 | Msa0934930:intron | 45.0% |
| ! | CGTGTTATTATTGGTCCACG+TGG | - | chr6_3:5204268-5204287 | Msa0934930:intron | 45.0% |
| GCAGGGACCAATACCAAAAT+TGG | - | chr6_3:5204395-5204414 | Msa0934930:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr6_3:5205288-5205307 | Msa0934930:intron | 45.0% | |
| TTTGAACTCGGCCCGTTAAT+AGG | + | chr6_3:5205596-5205615 | None:intergenic | 45.0% | |
| AGGAGACACAAATAGGACAC+TGG | + | chr6_3:5205654-5205673 | None:intergenic | 45.0% | |
| !! | AAAAAAAATAAAGTAAAATA+TGG | - | chr6_3:5198073-5198092 | Msa0934930:intron | 5.0% |
| !! | CAAAAAAAAAAAAAAAAAAT+GGG | + | chr6_3:5202338-5202357 | None:intergenic | 5.0% |
| !! | TCAAAAAAAAAAAAAAAAAA+TGG | + | chr6_3:5202339-5202358 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTGAAT+CGG | - | chr6_3:5202341-5202360 | Msa0934930:intron | 5.0% |
| !!! | AATCTTTTATAATTTTTTTT+AGG | - | chr6_3:5202758-5202777 | Msa0934930:intron | 5.0% |
| !! | TTATTAAAACTATAAAAAAA+AGG | + | chr6_3:5204453-5204472 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr6_3:5204510-5204529 | Msa0934930:intron | 5.0% |
| !! | TAAAAAAATTTAAAAAATTC+TGG | - | chr6_3:5204549-5204568 | Msa0934930:intron | 5.0% |
| !! | ATTAATAAAATTGAAAAAAA+CGG | + | chr6_3:5204966-5204985 | None:intergenic | 5.0% |
| !! | ATAAAAATATTAAAAAATTC+TGG | + | chr6_3:5205000-5205019 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTAAAAAATTC+TGG | + | chr6_3:5205065-5205084 | None:intergenic | 5.0% |
| !! | TAAAAAAATTAAAAAAATTC+TGG | + | chr6_3:5205152-5205171 | None:intergenic | 5.0% |
| !!! | TTTTATAAATTAAAAAATTC+TGG | + | chr6_3:5205191-5205210 | None:intergenic | 5.0% |
| TCGAACTTGAGACCTTGAGG+AGG | + | chr6_3:5198165-5198184 | None:intergenic | 50.0% | |
| ! | ATCTCTGGTGCCAATTTGGG+TGG | - | chr6_3:5198187-5198206 | Msa0934930:intron | 50.0% |
| ! | TCTCTGGTGCCAATTTGGGT+GGG | - | chr6_3:5198188-5198207 | Msa0934930:intron | 50.0% |
| !! | TGGAAGGTTGATGGAGTGAG+TGG | + | chr6_3:5199579-5199598 | None:intergenic | 50.0% |
| TGCACTGTGAGAACAAACCC+TGG | + | chr6_3:5200432-5200451 | None:intergenic | 50.0% | |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | chr6_3:5200627-5200646 | Msa0934930:intron | 50.0% |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | chr6_3:5200669-5200688 | None:intergenic | 50.0% |
| ACCGCTCTATTCGAAACCGA+TGG | - | chr6_3:5200794-5200813 | Msa0934930:intron | 50.0% | |
| !! | CCCATCGGTTTCGAATAGAG+CGG | + | chr6_3:5200798-5200817 | None:intergenic | 50.0% |
| CCGCTCTATTCGAAACCGAT+GGG | - | chr6_3:5200795-5200814 | Msa0934930:intron | 50.0% | |
| TCGAAACCGATGGGACAGAA+AGG | - | chr6_3:5200804-5200823 | Msa0934930:intron | 50.0% | |
| TGGTGTGAAGAATGAGTGGG+GGG | - | chr6_3:5200904-5200923 | Msa0934930:intron | 50.0% | |
| ! | AACGCGTTTTACGCGTGACT+TGG | - | chr6_3:5200986-5201005 | Msa0934930:intron | 50.0% |
| ! | ACGCGTTTTACGCGTGACTT+GGG | - | chr6_3:5200987-5201006 | Msa0934930:intron | 50.0% |
| ! | CAATTTTCCAACCCACGACC+CGG | - | chr6_3:5201197-5201216 | Msa0934930:intron | 50.0% |
| TTGGGGTGACTCTCCAATGT+GGG | - | chr6_3:5201352-5201371 | Msa0934930:intron | 50.0% | |
| AGGTAAGGCATAGGGAGGAA+AGG | - | chr6_3:5201494-5201513 | Msa0934930:intron | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | + | chr6_3:5202195-5202214 | None:intergenic | 50.0% | |
| AGTTCTGCAGCTTCTGCTCA+TGG | - | chr6_3:5202442-5202461 | Msa0934930:intron | 50.0% | |
| GTTCTGCAGCTTCTGCTCAT+GGG | - | chr6_3:5202443-5202462 | Msa0934930:intron | 50.0% | |
| ACCAATCATAACACGCCACG+TGG | - | chr6_3:5202946-5202965 | Msa0934930:CDS | 50.0% | |
| GTGTGTCTTGGCAACAGACT+TGG | + | chr6_3:5203136-5203155 | None:intergenic | 50.0% | |
| TCTGTTGCCAAGACACACGA+AGG | - | chr6_3:5203138-5203157 | Msa0934930:intron | 50.0% | |
| AACAGAGCCTTCGTGTGTCT+TGG | + | chr6_3:5203148-5203167 | None:intergenic | 50.0% | |
| AGACACACGAAGGCTCTGTT+TGG | - | chr6_3:5203148-5203167 | Msa0934930:intron | 50.0% | |
| CCAAACAGAGCCGAAGAGAA+CGG | - | chr6_3:5204044-5204063 | Msa0934930:intron | 50.0% | |
| AGCAGCAAAAGCAGAGGAAC+TGG | - | chr6_3:5204107-5204126 | Msa0934930:intron | 50.0% | |
| AAAACTAACGGTGTGCCACG+TGG | + | chr6_3:5204286-5204305 | None:intergenic | 50.0% | |
| !!! | CGTGGCACACCGTTAGTTTT+TGG | - | chr6_3:5204286-5204305 | Msa0934930:intron | 50.0% |
| !! | CGACACTTGGGTTGACCTAG+TGG | - | chr6_3:5198112-5198131 | Msa0934930:intron | 55.0% |
| ! | CTCTGGTGCCAATTTGGGTG+GGG | - | chr6_3:5198189-5198208 | Msa0934930:intron | 55.0% |
| TTACTGGGTGAGTCACGACC+AGG | - | chr6_3:5200580-5200599 | Msa0934930:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | chr6_3:5200664-5200683 | None:intergenic | 55.0% |
| CGGTTACGTACCGTATCGAG+TGG | + | chr6_3:5200778-5200797 | None:intergenic | 55.0% | |
| GGTGTGAAGAATGAGTGGGG+GGG | - | chr6_3:5200905-5200924 | Msa0934930:intron | 55.0% | |
| GTGTGAAGAATGAGTGGGGG+GGG | - | chr6_3:5200906-5200925 | Msa0934930:intron | 55.0% | |
| ! | GGGGGGAGCTCTCCTTTTAT+AGG | - | chr6_3:5200923-5200942 | Msa0934930:intron | 55.0% |
| ! | CGCGTTTTACGCGTGACTTG+GGG | - | chr6_3:5200988-5201007 | Msa0934930:intron | 55.0% |
| GTTGGGGTGACTCTCCAATG+TGG | - | chr6_3:5201351-5201370 | Msa0934930:intron | 55.0% | |
| GCCACGTGGCGTGTTATGAT+TGG | + | chr6_3:5202950-5202969 | None:intergenic | 55.0% | |
| CCGTTCTCTTCGGCTCTGTT+TGG | + | chr6_3:5204047-5204066 | None:intergenic | 55.0% | |
| GAGCCGAAGAGAACGGAGAA+TGG | - | chr6_3:5204051-5204070 | Msa0934930:intron | 55.0% | |
| AAGCAGAGGAACTGGAACGG+TGG | - | chr6_3:5204115-5204134 | Msa0934930:intron | 55.0% | |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | - | chr6_3:5198150-5198169 | Msa0934930:intron | 60.0% |
| CTAACAACCACGCCGTCTCC+AGG | - | chr6_3:5200654-5200673 | Msa0934930:intron | 60.0% | |
| ! | ACCTCCAAGGGTGTGCCCTT+GGG | + | chr6_3:5201303-5201322 | None:intergenic | 60.0% |
| AAGGGTGGGGTGACCTCCAA+GGG | + | chr6_3:5201315-5201334 | None:intergenic | 60.0% | |
| TAAGGGTGGGGTGACCTCCA+AGG | + | chr6_3:5201316-5201335 | None:intergenic | 60.0% | |
| TTTCCAACCCACGACCCGGC+CGG | - | chr6_3:5201201-5201220 | Msa0934930:intron | 65.0% | |
| ! | GTACCCCAAGGGCACACCCT+TGG | - | chr6_3:5201296-5201315 | Msa0934930:intron | 65.0% |
| ! | CCTCCAAGGGTGTGCCCTTG+GGG | + | chr6_3:5201302-5201321 | None:intergenic | 65.0% |
| ! | GACCTCCAAGGGTGTGCCCT+TGG | + | chr6_3:5201304-5201323 | None:intergenic | 65.0% |
| ! | CCCCAAGGGCACACCCTTGG+AGG | - | chr6_3:5201299-5201318 | Msa0934930:intron | 70.0% |
| CAACCCACGACCCGGCCGGT+CGG | - | chr6_3:5201205-5201224 | Msa0934930:intron | 75.0% | |
| ! | CGACCGGCCGGGTCGTGGGT+TGG | + | chr6_3:5201207-5201226 | None:intergenic | 80.0% |
| ! | CGTCCGACCGGCCGGGTCGT+GGG | + | chr6_3:5201211-5201230 | None:intergenic | 80.0% |
| ! | CCACGACCCGGCCGGTCGGA+CGG | - | chr6_3:5201209-5201228 | Msa0934930:intron | 80.0% |
| ! | GACCCGGCCGGTCGGACGGA+CGG | - | chr6_3:5201213-5201232 | Msa0934930:intron | 80.0% |
| ! | GACGCCGCCGTCCGTCCGAC+CGG | + | chr6_3:5201223-5201242 | None:intergenic | 80.0% |
| ! | CCGTCCGACCGGCCGGGTCG+TGG | + | chr6_3:5201212-5201231 | None:intergenic | 85.0% |
| ! | CGCCGTCCGTCCGACCGGCC+GGG | + | chr6_3:5201218-5201237 | None:intergenic | 85.0% |
| ! | CCGCCGTCCGTCCGACCGGC+CGG | + | chr6_3:5201219-5201238 | None:intergenic | 85.0% |
| ! | CCGGCCGGTCGGACGGACGG+CGG | - | chr6_3:5201216-5201235 | Msa0934930:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 5197438 | 5205748 | 5197438 | ID=Msa0934930;Name=Msa0934930 |
| chr6_3 | mRNA | 5197438 | 5205748 | 5197438 | ID=Msa0934930-mRNA-1;Parent=Msa0934930;Name=Msa0934930-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|0.83|0|0|6|0|269 |
| chr6_3 | exon | 5205537 | 5205748 | 5205537 | ID=Msa0934930-mRNA-1:exon:1628;Parent=Msa0934930-mRNA-1 |
| chr6_3 | exon | 5205385 | 5205515 | 5205385 | ID=Msa0934930-mRNA-1:exon:1627;Parent=Msa0934930-mRNA-1 |
| chr6_3 | exon | 5203248 | 5203367 | 5203248 | ID=Msa0934930-mRNA-1:exon:1626;Parent=Msa0934930-mRNA-1 |
| chr6_3 | exon | 5202764 | 5203009 | 5202764 | ID=Msa0934930-mRNA-1:exon:1625;Parent=Msa0934930-mRNA-1 |
| chr6_3 | exon | 5202753 | 5202759 | 5202753 | ID=Msa0934930-mRNA-1:exon:1624;Parent=Msa0934930-mRNA-1 |
| chr6_3 | exon | 5197438 | 5197531 | 5197438 | ID=Msa0934930-mRNA-1:exon:1623;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5205537 | 5205748 | 5205537 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5205385 | 5205515 | 5205385 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5203248 | 5203367 | 5203248 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5202764 | 5203009 | 5202764 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5202753 | 5202759 | 5202753 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| chr6_3 | CDS | 5197438 | 5197531 | 5197438 | ID=Msa0934930-mRNA-1:cds;Parent=Msa0934930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
