AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0972100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0972100 MtrunA17_Chr6g0451051 84.768 151 16 1 191 341 12 155 5.67e-87 258
Msa0972100 MtrunA17_Chr6g0451051 78.652 89 18 1 2 89 34 122 2.41e-46 154
Msa0972100 MtrunA17_Chr6g0451051 65.333 75 14 1 86 148 10 84 3.62e-25 99.4
Msa0972100 MtrunA17_Chr6g0451031 98.876 89 1 0 1 89 37 125 3.35e-60 189
Msa0972100 MtrunA17_Chr6g0451031 63.910 133 44 3 180 312 1 129 1.31e-53 172
Msa0972100 MtrunA17_Chr6g0451031 53.165 79 20 3 86 148 10 87 1.37e-16 75.5
Msa0972100 MtrunA17_Chr6g0451041 79.381 97 19 1 238 333 3 99 1.03e-47 156
Msa0972100 MtrunA17_Chr6g0451041 84.211 57 9 0 33 89 18 74 1.20e-28 106
Msa0972100 MtrunA17_Chr3g0117821 39.844 128 67 3 182 299 5 132 3.06e-25 99.4
Msa0972100 MtrunA17_Chr3g0117821 57.746 71 27 1 13 80 62 132 1.89e-24 97.4
Msa0972100 MtrunA17_Chr3g0123631 34.532 139 87 2 192 326 11 149 2.87e-19 84.3
Msa0972100 MtrunA17_Chr3g0123631 40.000 90 50 2 2 87 40 129 9.75e-15 71.6
Msa0972100 MtrunA17_Chr3g0123641 34.507 142 89 2 192 329 11 152 1.30e-18 83.6
Msa0972100 MtrunA17_Chr3g0123641 40.426 94 51 3 2 91 40 132 2.86e-14 71.2
Msa0972100 MtrunA17_Chr6g0486651 35.345 116 74 1 216 330 82 197 2.10e-16 79.3
Msa0972100 MtrunA17_Chr6g0486651 42.500 80 42 2 4 79 86 165 1.04e-13 71.2
Msa0972100 MtrunA17_Chr2g0295571 34.959 123 59 2 216 320 86 205 8.85e-16 76.6
Msa0972100 MtrunA17_Chr2g0295571 36.986 73 45 1 7 78 92 164 2.01e-12 67.0
Msa0972100 MtrunA17_Chr4g0059281 32.836 134 78 2 180 301 48 181 3.80e-15 75.1
Msa0972100 MtrunA17_Chr4g0059281 42.857 70 39 1 14 82 112 181 1.09e-12 67.8
Msa0972100 MtrunA17_Chr6g0451161 33.793 145 75 3 180 309 75 213 4.65e-15 75.5
Msa0972100 MtrunA17_Chr6g0451161 54.167 48 22 0 31 78 157 204 5.77e-12 66.2
Msa0972100 MtrunA17_Chr3g0143301 40.000 80 45 1 224 303 46 122 7.73e-15 70.5
Msa0972100 MtrunA17_Chr3g0143301 40.260 77 44 1 6 82 46 120 1.22e-14 69.7
Msa0972100 MtrunA17_Chr2g0297011 41.975 81 47 0 222 302 72 152 1.06e-14 70.9
Msa0972100 MtrunA17_Chr2g0297011 44.578 83 40 3 6 83 71 152 9.24e-14 68.2
Msa0972100 MtrunA17_Chr8g0364881 43.421 76 43 0 226 301 68 143 1.56e-14 73.6
Msa0972100 MtrunA17_Chr8g0364881 50.000 52 26 0 31 82 92 143 4.71e-12 66.2
Msa0972100 MtrunA17_Chr8g0383941 40.789 76 43 1 2 75 101 176 1.67e-14 71.6
Msa0972100 MtrunA17_Chr8g0383941 38.158 76 46 1 220 294 101 176 1.67e-11 63.2
Msa0972100 MtrunA17_Chr4g0027761 37.234 94 56 2 224 317 98 188 2.21e-14 70.9
Msa0972100 MtrunA17_Chr4g0027761 41.096 73 41 1 6 78 98 168 1.21e-13 68.9
Msa0972100 MtrunA17_Chr2g0307411 38.095 105 61 2 191 295 43 143 2.30e-14 70.9
Msa0972100 MtrunA17_Chr2g0307411 60.417 48 19 0 29 76 96 143 7.26e-13 66.6
Msa0972100 MtrunA17_Chr4g0073141 46.154 91 46 2 248 336 140 229 2.59e-14 73.6
Msa0972100 MtrunA17_Chr4g0073141 43.284 67 36 1 14 78 123 189 2.57e-13 70.9
Msa0972100 MtrunA17_Chr5g0407431 40.789 76 42 1 7 79 76 151 2.88e-14 70.9
Msa0972100 MtrunA17_Chr5g0407431 42.105 76 42 1 225 298 76 151 4.33e-14 70.5
Msa0972100 MtrunA17_Chr5g0413841 36.735 98 62 0 203 300 93 190 3.84e-14 72.8
Msa0972100 MtrunA17_Chr5g0413841 50.980 51 25 0 31 81 140 190 8.56e-11 62.4
Msa0972100 MtrunA17_Chr1g0157091 32.759 116 72 3 180 295 5 114 5.06e-14 68.2
Msa0972100 MtrunA17_Chr1g0157091 39.706 68 39 1 9 76 49 114 1.87e-11 61.2
Msa0972100 MtrunA17_Chr8g0383881 42.466 73 40 1 5 75 100 172 8.72e-14 69.7
Msa0972100 MtrunA17_Chr8g0383881 41.892 74 40 2 223 294 100 172 2.23e-11 62.8
Msa0972100 MtrunA17_Chr5g0427431 39.506 81 49 0 217 297 125 205 1.01e-13 71.6
Msa0972100 MtrunA17_Chr5g0427431 41.892 74 39 2 6 75 129 202 6.13e-13 69.3
Msa0972100 MtrunA17_Chr1g0198201 31.818 110 61 3 218 317 53 158 1.08e-13 69.7
Msa0972100 MtrunA17_Chr8g0383861 42.466 73 40 1 5 75 110 182 1.11e-13 69.7
Msa0972100 MtrunA17_Chr8g0383861 41.892 74 40 2 223 294 110 182 2.53e-11 62.8
Msa0972100 MtrunA17_Chr8g0383871 44.286 70 37 1 9 76 113 182 1.46e-13 69.3
Msa0972100 MtrunA17_Chr8g0383871 40.278 72 42 1 225 295 111 182 2.50e-11 62.8
Msa0972100 MtrunA17_Chr8g0383921 43.056 72 39 1 7 76 110 181 1.52e-13 68.9
Msa0972100 MtrunA17_Chr8g0383921 40.278 72 42 1 225 295 110 181 2.47e-11 62.4
Msa0972100 MtrunA17_Chr7g0269491 44.118 68 36 1 232 297 72 139 1.53e-13 68.6
Msa0972100 MtrunA17_Chr7g0269491 39.189 74 42 1 8 78 66 139 2.28e-12 65.1
Msa0972100 MtrunA17_Chr2g0317671 42.308 78 41 1 3 76 125 202 1.69e-13 68.6
Msa0972100 MtrunA17_Chr2g0317671 42.308 78 42 1 221 295 125 202 5.48e-13 67.0
Msa0972100 MtrunA17_Chr3g0128771 39.744 78 45 1 219 294 84 161 1.84e-13 67.8
Msa0972100 MtrunA17_Chr3g0128771 35.802 81 49 1 1 78 84 164 2.49e-12 64.7
Msa0972100 MtrunA17_Chr7g0244851 34.286 105 66 1 210 311 62 166 2.17e-13 67.8
Msa0972100 MtrunA17_Chr7g0244851 37.805 82 48 2 9 87 82 163 4.37e-12 63.9
Msa0972100 MtrunA17_Chr3g0105441 41.000 100 51 3 233 329 118 212 3.42e-13 68.6
Msa0972100 MtrunA17_Chr3g0133001 40.789 76 45 0 222 297 126 201 3.92e-13 69.7
Msa0972100 MtrunA17_Chr3g0133001 43.836 73 37 2 7 75 126 198 9.70e-13 68.6
Msa0972100 MtrunA17_Chr5g0406031 33.945 109 62 2 196 294 123 231 4.49e-13 67.8
Msa0972100 MtrunA17_Chr5g0406031 35.135 74 45 1 5 75 158 231 6.61e-12 64.7
Msa0972100 MtrunA17_Chr3g0144241 41.558 77 45 0 9 85 80 156 4.53e-13 67.0
Msa0972100 MtrunA17_Chr3g0144241 42.466 73 41 1 225 297 78 149 5.86e-12 63.9
Msa0972100 MtrunA17_Chr4g0030831 43.077 65 34 1 14 75 90 154 4.70e-13 66.6
Msa0972100 MtrunA17_Chr5g0409201 28.125 128 85 2 180 302 18 143 4.95e-13 66.2
Msa0972100 MtrunA17_Chr5g0409201 48.214 56 27 1 21 76 83 136 7.90e-11 60.1
Msa0972100 MtrunA17_Chr2g0301871 43.939 66 33 2 17 78 63 128 5.21e-13 68.6
Msa0972100 MtrunA17_Chr2g0301871 43.939 66 34 1 235 297 63 128 7.72e-12 65.1
Msa0972100 MtrunA17_Chr3g0132491 36.792 106 60 3 195 295 76 179 5.28e-13 69.3
Msa0972100 MtrunA17_Chr3g0132491 44.643 56 31 0 29 84 132 187 4.24e-12 66.6
Msa0972100 MtrunA17_Chr4g0060981 45.833 72 38 1 226 297 149 219 5.62e-13 67.4
Msa0972100 MtrunA17_Chr4g0060981 40.000 70 42 0 9 78 150 219 8.77e-12 63.9
Msa0972100 MtrunA17_Chr8g0345361 39.024 82 49 1 232 313 98 178 6.13e-13 67.8
Msa0972100 MtrunA17_Chr8g0345361 37.681 69 43 0 14 82 98 166 6.94e-12 64.7
Msa0972100 MtrunA17_Chr5g0444161 36.585 82 50 1 221 300 152 233 6.59e-13 67.4
Msa0972100 MtrunA17_Chr5g0444161 32.927 82 52 1 3 81 152 233 2.06e-11 63.2
Msa0972100 MtrunA17_Chr3g0129671 42.697 89 39 3 226 314 120 196 9.99e-13 67.0
Msa0972100 MtrunA17_Chr3g0129671 44.928 69 36 1 9 75 110 178 1.90e-12 66.2
Msa0972100 MtrunA17_Chr8g0370171 39.024 82 48 1 216 295 60 141 1.08e-12 66.2
Msa0972100 MtrunA17_Chr8g0370171 40.000 75 42 1 5 76 67 141 1.45e-12 65.9
Msa0972100 MtrunA17_Chr7g0273051 36.559 93 51 4 2 86 81 173 1.11e-12 68.2
Msa0972100 MtrunA17_Chr7g0273051 29.032 124 76 3 191 305 53 173 6.95e-11 62.8
Msa0972100 MtrunA17_Chr8g0371291 42.424 66 35 1 13 78 163 225 1.16e-12 66.6
Msa0972100 MtrunA17_Chr8g0371291 39.130 69 38 1 226 294 158 222 1.21e-12 66.6
Msa0972100 MtrunA17_Chr1g0191601 31.624 117 64 4 191 295 58 170 1.18e-12 68.2
Msa0972100 MtrunA17_Chr1g0191601 33.333 93 55 3 1 86 88 180 2.43e-12 67.4
Msa0972100 MtrunA17_Chr7g0237871 34.579 107 58 3 228 332 132 228 1.28e-12 66.6
Msa0972100 MtrunA17_Chr7g0237871 38.272 81 47 2 10 87 132 212 1.01e-11 63.9
Msa0972100 MtrunA17_Chr8g0345381 46.154 52 28 0 252 303 53 104 1.65e-12 64.7
Msa0972100 MtrunA17_Chr8g0345381 46.000 50 27 0 33 82 53 102 1.74e-11 61.6
Msa0972100 MtrunA17_Chr1g0203541 39.759 83 42 2 243 321 127 205 1.82e-12 65.9
Msa0972100 MtrunA17_Chr1g0203541 35.526 76 45 1 20 91 119 194 2.28e-11 62.4
Msa0972100 MtrunA17_Chr5g0430781 37.500 88 50 2 7 91 86 171 2.02e-12 65.9
Msa0972100 MtrunA17_Chr2g0327791 36.364 110 53 4 225 327 101 200 2.78e-12 65.5
Msa0972100 MtrunA17_Chr2g0327791 41.176 68 37 1 14 78 113 180 1.80e-11 63.2
Msa0972100 MtrunA17_Chr5g0426881 38.889 90 50 2 222 306 110 199 2.87e-12 67.0
Msa0972100 MtrunA17_Chr5g0426881 40.000 85 47 2 4 84 110 194 3.00e-12 67.0
Msa0972100 MtrunA17_Chr4g0067591 36.986 73 44 1 225 297 79 149 3.77e-12 65.9
Msa0972100 MtrunA17_Chr4g0067591 36.923 65 40 1 14 78 86 149 7.15e-12 65.1
Msa0972100 MtrunA17_Chr8g0343571 34.043 94 62 0 238 331 71 164 5.72e-12 63.5
Msa0972100 MtrunA17_Chr8g0383901 48.333 60 22 1 16 75 123 173 6.22e-12 64.3
Msa0972100 MtrunA17_Chr8g0383901 56.818 44 19 0 251 294 130 173 1.25e-11 63.5
Msa0972100 MtrunA17_Chr6g0470751 40.541 74 41 1 249 319 123 196 7.30e-12 65.5
Msa0972100 MtrunA17_Chr6g0470751 43.077 65 35 1 20 82 111 175 1.08e-11 65.1
Msa0972100 MtrunA17_Chr8g0383931 47.541 61 23 1 16 76 133 184 7.69e-12 64.3
Msa0972100 MtrunA17_Chr8g0383931 55.556 45 20 0 251 295 140 184 1.16e-11 63.9
Msa0972100 MtrunA17_Chr2g0325141 40.580 69 35 1 235 297 68 136 8.67e-12 62.4
Msa0972100 MtrunA17_Chr2g0325141 50.000 48 24 0 31 78 89 136 2.15e-11 61.2
Msa0972100 MtrunA17_Chr7g0276591 39.706 68 40 1 232 299 82 148 9.33e-12 64.7
Msa0972100 MtrunA17_Chr8g0345401 41.509 53 31 0 252 304 49 101 1.10e-11 62.0
Msa0972100 MtrunA17_Chr3g0112041 31.683 101 58 2 199 299 170 259 1.28e-11 64.3
Msa0972100 MtrunA17_Chr3g0126931 40.909 66 38 1 14 78 107 172 1.35e-11 65.1
Msa0972100 MtrunA17_Chr3g0126931 34.118 85 56 0 232 316 107 191 2.11e-11 64.3
Msa0972100 MtrunA17_Chr4g0010171 41.176 85 43 2 219 303 87 164 1.77e-11 62.4
Msa0972100 MtrunA17_Chr3g0113811 28.947 152 95 5 169 307 11 162 2.14e-11 62.0
Msa0972100 MtrunA17_Chr5g0437361 35.227 88 51 2 214 297 63 148 2.53e-11 61.6
Msa0972100 MtrunA17_Chr5g0437361 44.444 54 30 0 25 78 95 148 4.14e-11 60.8
Msa0972100 MtrunA17_Chr1g0186661 30.714 140 78 4 210 330 81 220 2.54e-11 63.9
Msa0972100 MtrunA17_Chr8g0336881 40.580 69 37 2 14 78 82 150 2.72e-11 63.9
Msa0972100 MtrunA17_Chr2g0300331 45.455 55 30 0 25 79 161 215 3.31e-11 62.8
Msa0972100 MtrunA17_Chr2g0300331 39.316 117 61 5 215 323 125 239 3.40e-11 62.8
Msa0972100 MtrunA17_Chr8g0369571 50.000 46 23 0 31 76 88 133 4.41e-11 61.2
Msa0972100 MtrunA17_Chr8g0369571 30.000 120 77 2 180 295 17 133 9.09e-11 60.5
Msa0972100 MtrunA17_Chr1g0184171 31.522 92 59 2 213 303 93 181 5.90e-11 62.8
Msa0972100 MtrunA17_Chr4g0052671 52.174 46 22 0 252 297 106 151 7.59e-11 59.7
Msa0972100 MtrunA17_Chr7g0274711 37.333 75 47 0 251 325 95 169 7.96e-11 60.5
Msa0972100 MtrunA17_Chr7g0274711 48.889 45 23 0 32 76 95 139 8.44e-11 60.5
Msa0972100 MtrunA17_Chr8g0366561 49.057 53 27 0 251 303 141 193 8.03e-11 62.8
Msa0972100 MtrunA17_Chr5g0444141 32.075 106 62 3 205 300 163 268 8.81e-11 61.6
Msa0972100 MtrunA17_Chr7g0274741 35.135 74 45 1 225 295 69 142 9.01e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0972100 AT3G48030.2 33.793 145 83 4 207 341 86 227 1.43e-16 79.0
Msa0972100 AT3G48030.2 39.189 74 43 1 9 80 103 176 4.80e-13 68.9
Msa0972100 AT3G48030.1 33.784 148 79 5 207 341 164 305 5.21e-16 78.6
Msa0972100 AT3G48030.1 42.029 69 38 1 9 75 181 249 4.99e-13 69.7
Msa0972100 AT5G01880.1 43.038 79 43 1 216 294 71 147 1.22e-15 73.9
Msa0972100 AT5G01880.1 40.845 71 41 1 6 75 77 147 6.90e-14 68.9
Msa0972100 AT4G28890.1 36.735 98 61 1 213 310 85 181 1.26e-15 77.8
Msa0972100 AT4G28890.1 35.955 89 55 2 9 95 98 186 1.46e-13 71.6
Msa0972100 AT5G57750.1 36.207 116 65 2 214 320 83 198 2.89e-15 74.3
Msa0972100 AT5G57750.1 46.970 66 35 0 10 75 99 164 2.99e-13 68.6
Msa0972100 AT3G16720.1 34.821 112 61 3 216 327 86 185 6.28e-15 74.7
Msa0972100 AT3G16720.1 37.143 70 44 0 14 83 100 169 1.05e-13 71.2
Msa0972100 AT1G23980.1 45.205 73 40 0 227 299 119 191 6.99e-15 75.5
Msa0972100 AT1G23980.1 42.647 68 38 1 14 80 124 191 2.40e-11 64.7
Msa0972100 AT1G74410.1 45.205 73 40 0 225 297 149 221 9.82e-15 72.8
Msa0972100 AT1G74410.1 42.466 73 41 1 7 78 149 221 2.85e-13 68.6
Msa0972100 AT1G72310.1 41.429 70 41 0 9 78 103 172 2.88e-14 73.2
Msa0972100 AT1G72310.1 32.143 112 71 3 227 334 103 213 4.62e-14 72.4
Msa0972100 AT2G18650.1 46.269 67 34 1 14 78 105 171 3.18e-14 73.6
Msa0972100 AT2G18650.1 39.130 92 50 1 248 339 122 207 9.89e-13 68.9
Msa0972100 AT3G60220.1 28.667 150 81 5 14 142 94 238 1.34e-13 71.2
Msa0972100 AT3G60220.1 39.773 88 45 2 232 311 94 181 2.91e-13 70.1
Msa0972100 AT1G53820.1 42.308 78 37 2 250 322 118 192 1.35e-13 70.9
Msa0972100 AT1G53820.1 48.000 50 26 0 31 80 118 167 4.24e-13 69.3
Msa0972100 AT2G17450.1 38.750 80 42 1 225 297 68 147 1.71e-13 68.6
Msa0972100 AT2G17450.1 36.250 80 43 1 7 78 68 147 8.15e-13 66.6
Msa0972100 AT5G05280.1 37.079 89 48 1 7 87 87 175 1.75e-13 68.2
Msa0972100 AT5G05280.1 38.158 76 46 1 225 300 87 161 1.60e-11 62.8
Msa0972100 AT3G18930.2 51.923 52 25 0 32 83 155 206 3.04e-13 70.5
Msa0972100 AT3G18930.2 45.614 57 31 0 241 297 145 201 4.83e-11 63.9
Msa0972100 AT3G18930.3 51.923 52 25 0 32 83 155 206 3.04e-13 70.5
Msa0972100 AT3G18930.3 45.614 57 31 0 241 297 145 201 4.83e-11 63.9
Msa0972100 AT3G18930.1 51.923 52 25 0 32 83 155 206 3.04e-13 70.5
Msa0972100 AT3G18930.1 45.614 57 31 0 241 297 145 201 4.83e-11 63.9
Msa0972100 AT4G30400.1 45.312 64 33 1 14 75 113 176 3.26e-13 70.9
Msa0972100 AT4G30400.1 48.438 64 32 1 232 294 113 176 7.54e-13 69.7
Msa0972100 AT2G20030.1 35.135 111 63 2 227 329 99 208 3.75e-13 70.1
Msa0972100 AT2G20030.1 30.252 119 76 4 9 126 99 211 1.15e-11 65.9
Msa0972100 AT3G14320.1 40.789 76 44 1 222 297 59 133 4.02e-13 67.8
Msa0972100 AT3G14320.1 36.000 75 48 0 4 78 59 133 8.79e-12 63.9
Msa0972100 AT4G09110.1 35.354 99 59 2 202 295 68 166 4.16e-13 69.3
Msa0972100 AT4G09110.1 34.118 85 52 1 4 84 90 174 6.53e-11 62.8
Msa0972100 AT3G05200.1 28.796 191 107 7 145 320 12 188 5.79e-13 69.7
Msa0972100 AT4G09100.1 40.506 79 44 1 222 297 52 130 6.80e-13 65.5
Msa0972100 AT5G05810.1 45.455 66 36 0 232 297 126 191 7.23e-13 69.3
Msa0972100 AT5G05810.1 42.466 73 38 2 7 75 116 188 4.75e-12 67.0
Msa0972100 AT4G09120.1 39.744 78 44 1 221 295 89 166 7.47e-13 68.9
Msa0972100 AT4G09120.1 33.721 86 53 1 3 84 89 174 4.01e-11 63.9
Msa0972100 AT5G40250.1 30.114 176 94 5 180 326 49 224 7.88e-13 69.3
Msa0972100 AT5G40250.1 50.000 50 25 0 31 80 141 190 5.81e-11 63.5
Msa0972100 AT4G30370.1 41.667 72 42 0 226 297 89 160 8.45e-13 66.2
Msa0972100 AT2G17730.1 37.805 82 47 2 217 294 157 238 8.75e-13 67.8
Msa0972100 AT2G17730.1 46.154 52 28 0 24 75 187 238 1.22e-11 64.3
Msa0972100 AT3G62690.1 36.364 88 56 0 210 297 71 158 9.81e-13 67.8
Msa0972100 AT3G20395.1 38.571 70 42 1 6 75 145 213 1.08e-12 67.0
Msa0972100 AT3G20395.1 39.437 71 41 2 224 294 145 213 1.04e-11 64.3
Msa0972100 AT4G09130.1 33.058 121 71 2 214 324 79 199 1.11e-12 68.6
Msa0972100 AT4G09130.1 37.647 85 49 1 4 84 87 171 6.06e-12 66.2
Msa0972100 AT4G40070.1 36.607 112 67 3 194 301 62 173 1.69e-12 67.8
Msa0972100 AT4G40070.1 41.096 73 39 2 14 82 101 173 3.91e-11 63.9
Msa0972100 AT2G18670.1 42.466 73 41 1 226 297 83 155 1.78e-12 65.5
Msa0972100 AT2G18670.1 53.191 47 22 0 32 78 109 155 3.31e-11 62.0
Msa0972100 AT1G20823.1 39.241 79 47 1 220 297 78 156 2.51e-12 65.5
Msa0972100 AT1G20823.1 36.709 79 48 1 2 78 78 156 9.52e-12 63.9
Msa0972100 AT4G35840.1 37.333 75 44 1 223 294 159 233 2.58e-12 66.2
Msa0972100 AT2G27940.1 39.437 71 43 0 6 76 113 183 2.74e-12 66.2
Msa0972100 AT2G27940.1 39.130 92 52 2 207 295 93 183 2.93e-12 66.2
Msa0972100 AT1G14200.1 40.278 72 42 1 4 75 80 150 3.64e-12 64.7
Msa0972100 AT1G76410.1 37.975 79 47 1 2 78 71 149 4.26e-12 64.7
Msa0972100 AT1G76410.1 40.506 79 46 1 220 297 71 149 4.34e-12 64.7
Msa0972100 AT3G03550.1 33.663 101 62 1 232 327 139 239 5.60e-12 66.6
Msa0972100 AT3G03550.1 37.333 75 46 1 14 87 139 213 1.13e-11 65.5
Msa0972100 AT4G15975.1 32.530 83 50 1 14 90 57 139 5.68e-12 65.1
Msa0972100 AT5G42200.1 38.028 71 44 0 225 295 77 147 5.90e-12 63.5
Msa0972100 AT5G42200.1 35.897 78 45 2 7 81 77 152 2.64e-11 62.0
Msa0972100 AT3G10910.1 42.647 68 39 0 227 294 89 156 6.89e-12 63.9
Msa0972100 AT3G10910.1 38.356 73 40 2 9 78 89 159 5.31e-11 61.2
Msa0972100 AT5G17600.1 28.571 133 83 3 216 340 106 234 8.86e-12 65.9
Msa0972100 AT5G17600.1 26.957 115 74 2 32 142 141 249 2.61e-11 64.7
Msa0972100 AT1G71980.1 53.846 52 22 2 244 294 224 274 1.41e-11 65.9
Msa0972100 AT1G71980.1 47.541 61 30 2 25 84 224 283 1.74e-11 65.5
Msa0972100 AT5G66160.2 31.897 116 72 4 193 307 178 287 1.45e-11 64.7
Msa0972100 AT5G66160.2 38.298 94 51 5 4 91 198 290 2.05e-11 64.3
Msa0972100 AT2G44581.1 47.368 57 29 1 241 297 60 115 1.60e-11 62.0
Msa0972100 AT1G49220.1 40.278 72 41 1 7 76 107 178 1.61e-11 64.3
Msa0972100 AT1G49220.1 35.354 99 53 3 199 295 89 178 6.02e-11 62.4
Msa0972100 AT5G66070.5 41.509 53 31 0 23 75 166 218 1.66e-11 63.5
Msa0972100 AT5G66070.5 46.667 45 24 0 250 294 174 218 7.63e-11 61.6
Msa0972100 AT5G66070.1 41.509 53 31 0 23 75 166 218 1.66e-11 63.5
Msa0972100 AT5G66070.1 46.667 45 24 0 250 294 174 218 7.63e-11 61.6
Msa0972100 AT4G35480.1 40.625 64 36 1 15 78 97 158 1.98e-11 63.2
Msa0972100 AT4G35480.1 40.000 65 36 1 233 297 97 158 5.48e-11 61.6
Msa0972100 AT5G66160.1 29.457 129 81 4 193 320 178 297 2.13e-11 64.3
Msa0972100 AT1G35330.1 38.961 77 44 1 222 295 96 172 2.40e-11 64.3
Msa0972100 AT1G53010.1 47.727 44 23 0 32 75 129 172 2.42e-11 62.4
Msa0972100 AT5G27420.1 31.132 106 70 1 225 327 94 199 2.51e-11 64.7
Msa0972100 AT5G66070.2 41.509 53 31 0 23 75 190 242 2.60e-11 63.5
Msa0972100 AT2G47560.1 37.333 75 45 1 225 297 79 153 2.61e-11 63.2
Msa0972100 AT2G42350.1 40.278 72 42 1 224 295 73 143 2.76e-11 62.8
Msa0972100 AT2G42350.1 35.211 71 46 0 6 76 73 143 8.34e-11 61.6
Msa0972100 AT4G17905.2 36.190 105 59 3 227 326 159 260 3.40e-11 63.9
Msa0972100 AT2G42360.1 40.000 75 44 1 224 297 79 153 3.68e-11 62.8
Msa0972100 AT3G18773.1 39.437 71 41 1 7 75 102 172 3.76e-11 62.4
Msa0972100 AT3G18773.1 38.028 71 43 1 225 294 102 172 9.28e-11 61.2
Msa0972100 AT2G44578.1 32.000 125 72 4 174 297 3 115 4.16e-11 60.8
Msa0972100 AT4G17905.1 36.190 105 59 3 227 326 133 234 4.18e-11 63.5
Msa0972100 AT1G49210.1 42.029 69 38 1 9 75 109 177 7.18e-11 62.0
Msa0972100 AT1G49200.1 38.028 71 42 1 7 75 108 178 7.20e-11 62.0
Msa0972100 AT3G60966.1 43.860 57 32 0 241 297 51 107 8.91e-11 59.7
Msa0972100 AT1G32361.1 41.270 63 35 1 232 294 136 196 9.49e-11 62.8

Find 64 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGATTCTCCAAATCAATTT+TGG 0.138551 6_4:-4247692 None:intergenic
GATTATGTTGCAAAAGAAAA+TGG 0.230340 6_4:+4250413 Msa0972100:CDS
GATTATGTTGCAAAAGAAAA+TGG 0.230340 6_4:+4255063 Msa0972100:CDS
AAGAATTTCCAAAATTGATT+TGG 0.237365 6_4:+4247684 Msa0972100:CDS
GTCTCACCGGCATTTGTTAT+TGG 0.254593 6_4:-4253901 None:intergenic
TTGTCCAATTTGTAGATCTA+TGG 0.257672 6_4:+4255215 Msa0972100:CDS
AAGCATTTCCAAAACTGATT+TGG 0.260080 6_4:+4250373 Msa0972100:CDS
AAGCTTCTCCAAATCAGTTT+TGG 0.283082 6_4:-4250381 None:intergenic
GTTTGGAGAATTTCACTATT+GGG 0.290326 6_4:+4255112 Msa0972100:CDS
GCTTGGAGAATTTCACTATT+GGG 0.299814 6_4:+4247770 Msa0972100:CDS
GCTTGGAGAATTTCACTATT+GGG 0.299814 6_4:+4250462 Msa0972100:CDS
AGTGCAAACAAAGTTGTTAT+AGG 0.302873 6_4:+4255249 Msa0972100:CDS
CAGGAAAACATATACGAAAT+AGG 0.312839 6_4:-4254939 None:intergenic
TGCTTGGAGAATTTCACTAT+TGG 0.315711 6_4:+4247769 Msa0972100:CDS
TGCTTGGAGAATTTCACTAT+TGG 0.315711 6_4:+4250461 Msa0972100:CDS
GAAGAGGAGCAATGATTGAT+AGG 0.317847 6_4:+4247653 None:intergenic
TGTTTGGAGAATTTCACTAT+TGG 0.324990 6_4:+4255111 Msa0972100:CDS
TTTAGATTGTGCAATTTGTT+TGG 0.325499 6_4:+4255095 Msa0972100:CDS
ATTTGTAGGACTAGTGCTTT+TGG 0.332746 6_4:+4254915 Msa0972100:intron
CCAATCATAGATCTACAAAT+TGG 0.351900 6_4:-4247877 None:intergenic
CCAACCATAGATCTACAAAT+TGG 0.357467 6_4:-4255219 None:intergenic
GAGCAACAACAATGGTTGAT+AGG 0.371915 6_4:+4254992 Msa0972100:CDS
AGTGGAGACAAAGTTGTTAT+AGG 0.374604 6_4:+4247907 Msa0972100:CDS
AGATCTACAAATTGGACAAA+TGG 0.376354 6_4:-4247869 None:intergenic
TGAAAACTATGCTTGCAAAT+AGG 0.384463 6_4:-4247811 None:intergenic
AAGCTTCTCTAAATCAACTT+TGG 0.406813 6_4:-4255031 None:intergenic
CCAATTTGTAGATCTATGAT+TGG 0.407679 6_4:+4247877 Msa0972100:CDS
AACAAATTGCACAATCTAAA+GGG 0.417519 6_4:-4255092 None:intergenic
AGATCTACAAATTGGACAAA+TGG 0.421145 6_4:-4255211 None:intergenic
ACGTAACAATGGAAGAGAAA+TGG 0.422873 6_4:+4250619 Msa0972100:CDS
GATCTACAAATTGGACAAAT+GGG 0.428360 6_4:-4247868 None:intergenic
ATGCTCAATGTGTGGATCAA+TGG 0.439509 6_4:+4247833 Msa0972100:CDS
ATGCTCAATGTGTGGATCAA+TGG 0.439509 6_4:+4255175 Msa0972100:CDS
TGTGATTCTACTTCAAATGT+TGG 0.442241 6_4:-4255342 None:intergenic
AAACAAATTGCACAATCTAA+AGG 0.442477 6_4:-4255093 None:intergenic
AAGAGGAGCAATGATTGATA+GGG 0.448169 6_4:+4247654 None:intergenic
TATTGATTGTGCAATTTGCT+TGG 0.451242 6_4:+4247753 Msa0972100:CDS
AGAAAATGGAAGTAACCCTT+TGG 0.453658 6_4:+4250427 Msa0972100:CDS
AGTTATATGAGTATGAGATT+AGG 0.461054 6_4:+4254967 Msa0972100:CDS
AGCAACAACAATGGTTGATA+GGG 0.465961 6_4:+4254993 Msa0972100:CDS
TTTGGATTGTGCAATTTGCT+TGG 0.487761 6_4:+4250445 Msa0972100:CDS
CCAATTTGTAGATCTATGGT+TGG 0.498208 6_4:+4255219 Msa0972100:CDS
CTTGGAGAATTTCACTATTG+GGG 0.512048 6_4:+4247771 Msa0972100:CDS
CTTGGAGAATTTCACTATTG+GGG 0.512048 6_4:+4250463 Msa0972100:CDS
AGCAAATTGCACAATCCAAA+GGG 0.514135 6_4:-4250442 None:intergenic
TCTCTAAATCAACTTTGGAA+AGG 0.515540 6_4:-4255026 None:intergenic
TTTGGAGAATTTCACTATTG+GGG 0.528111 6_4:+4255113 Msa0972100:CDS
AGAGGAGCAATGATTGATAG+GGG 0.531342 6_4:+4247655 None:intergenic
TCTATGATTGGTTCTCATAG+TGG 0.538054 6_4:+4247889 Msa0972100:CDS
TTGTCCTATTTGTAGATCCA+GGG 0.538530 6_4:+4250565 Msa0972100:intron
ATACTCATATAACTCTCAGC+AGG 0.552332 6_4:-4254958 None:intergenic
AAAGTTGTTATAGGTAACAA+TGG 0.569424 6_4:+4255258 Msa0972100:CDS
AAGCAAATTGCACAATCCAA+AGG 0.574315 6_4:-4250443 None:intergenic
TGAAAATTGTGCTTGCAAGT+AGG 0.575339 6_4:-4255153 None:intergenic
TCGACACCAATAACAAATGC+CGG 0.594829 6_4:+4253895 Msa0972100:CDS
GGAAGAGAAAGCATAGAAAG+TGG 0.597369 6_4:+4255279 Msa0972100:CDS
AAAGTTGTTATACGTAACAA+TGG 0.598600 6_4:+4250608 Msa0972100:CDS
GCAACAACAATGGTTGATAG+GGG 0.635210 6_4:+4254994 Msa0972100:CDS
TTTGCAACATAATCATAACA+TGG 0.646690 6_4:-4250404 None:intergenic
TTTGCAACATAATCATAACA+TGG 0.646690 6_4:-4255054 None:intergenic
TGCACTGTGAGAACAAACCC+TGG 0.650314 6_4:-4250582 None:intergenic
ATTAGGAAGAGCAACAACAA+TGG 0.675773 6_4:+4254984 Msa0972100:CDS
TCAACAACATAATCATAACA+TGG 0.678875 6_4:-4247715 None:intergenic
TCGATGCTAATACTAAGACA+CGG 0.738962 6_4:-4253876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATTTTTATTTT+AGG + chr6_4:4249282-4249301 Msa0972100:intron 0.0%
!!! TTTATTTTATTTTTATTTTA+GGG + chr6_4:4249283-4249302 Msa0972100:intron 0.0%
!! TATATATATATATATATATA+TGG + chr6_4:4251267-4251286 Msa0972100:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr6_4:4251268-4251287 Msa0972100:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr6_4:4251268-4251287 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr6_4:4251267-4251286 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr6_4:4251267-4251286 Msa0972100:intron 0.0%
!! CAAAAAAATAAAGTAAAATA+TGG + chr6_4:4248229-4248248 Msa0972100:intron 10.0%
!! TTTATATATCAATATATTCA+TGG - chr6_4:4249347-4249366 None:intergenic 10.0%
!! CTGATAATAAAAAAAAATAA+GGG - chr6_4:4249862-4249881 None:intergenic 10.0%
!! ACTGATAATAAAAAAAAATA+AGG - chr6_4:4249863-4249882 None:intergenic 10.0%
!! TTTATGTTTATAAAATTTCT+AGG + chr6_4:4250222-4250241 Msa0972100:intron 10.0%
!!! TTTTTTTTTTTTTTTGAATC+GGG + chr6_4:4251722-4251741 Msa0972100:intron 10.0%
!! AAATAAATTTAGATATAGAT+AGG - chr6_4:4251860-4251879 None:intergenic 10.0%
!!! TTTTTTTTTTTTAAAGTAAG+TGG + chr6_4:4252721-4252740 Msa0972100:intron 10.0%
!! CTCAATATATATTATTAAAA+AGG + chr6_4:4253276-4253295 Msa0972100:intron 10.0%
!! GAAAAATATATATATACAAA+CGG + chr6_4:4253299-4253318 Msa0972100:intron 10.0%
!! AAAAATATATATATACAAAC+GGG + chr6_4:4253300-4253319 Msa0972100:intron 10.0%
!!! TTAGTCTTATATTAAAAAAA+AGG + chr6_4:4253501-4253520 Msa0972100:intron 10.0%
!! TATAAATAATATTCAACAAA+AGG + chr6_4:4254792-4254811 Msa0972100:intron 10.0%
!! AAAATAAAATTTGATTGACA+CGG - chr6_4:4249069-4249088 None:intergenic 15.0%
!!! GTATAAAAGTTTTCAATAAT+GGG + chr6_4:4249305-4249324 Msa0972100:intron 15.0%
!! TTTAGAAATATTAAATTGTG+TGG + chr6_4:4249427-4249446 Msa0972100:intron 15.0%
!!! TAATACATAAGAGTATTAAT+TGG - chr6_4:4249580-4249599 None:intergenic 15.0%
!!! GACAAATATGTTATTTTAAA+TGG + chr6_4:4249770-4249789 Msa0972100:intron 15.0%
!!! TAATTTGTACTAATATTTGT+AGG + chr6_4:4250308-4250327 Msa0972100:intron 15.0%
!!! ATCTTTAGAGATTTTTTTTT+TGG + chr6_4:4250929-4250948 Msa0972100:intron 15.0%
!!! TCTTTAGAGATTTTTTTTTT+GGG + chr6_4:4250930-4250949 Msa0972100:intron 15.0%
!! TAGAGATTAATAATACATAT+TGG + chr6_4:4250969-4250988 Msa0972100:intron 15.0%
!!! TTTGTATATTCTATTTTTGA+AGG + chr6_4:4251879-4251898 Msa0972100:intron 15.0%
!!! GATTCTATTTTGATTTTTTT+TGG + chr6_4:4251922-4251941 Msa0972100:intron 15.0%
!!! TTAATCATTTTTTACAATCT+TGG + chr6_4:4252588-4252607 Msa0972100:intron 15.0%
!!! AAATACTACATTTTGAAATA+TGG + chr6_4:4252787-4252806 Msa0972100:intron 15.0%
!!! AATACTACATTTTGAAATAT+GGG + chr6_4:4252788-4252807 Msa0972100:intron 15.0%
!! AAATTAAAATAATGTACAAG+AGG - chr6_4:4253021-4253040 None:intergenic 15.0%
!! AATAATATATATTGAGTATG+TGG - chr6_4:4253272-4253291 None:intergenic 15.0%
!!! TATTAAAAAAAAGGTGTAAA+AGG + chr6_4:4253510-4253529 Msa0972100:intron 15.0%
!! CTATTAAACTTAGAAAAATA+TGG - chr6_4:4253929-4253948 None:intergenic 15.0%
!! TCAATTATTGTTATCAATTT+AGG + chr6_4:4253997-4254016 Msa0972100:intron 15.0%
!! CAATTATTGTTATCAATTTA+GGG + chr6_4:4253998-4254017 Msa0972100:intron 15.0%
!! TTAATAATAGTACCTATAAT+AGG + chr6_4:4254409-4254428 Msa0972100:intron 15.0%
!!! CATTAATAAATTGTTATTAG+TGG - chr6_4:4254478-4254497 None:intergenic 15.0%
!!! ATGATTATTTTATTGAAAAG+TGG + chr6_4:4254523-4254542 Msa0972100:intron 15.0%
!! AAGAATTTCCAAAATTGATT+TGG + chr6_4:4247684-4247703 Msa0972100:CDS 20.0%
!!! GTGTAATTAACTTGAAAATT+AGG - chr6_4:4248943-4248962 None:intergenic 20.0%
!! ATTAACCTTATAACAAACTT+AGG - chr6_4:4249264-4249283 None:intergenic 20.0%
!!! GGTATAAAAGTTTTCAATAA+TGG + chr6_4:4249304-4249323 Msa0972100:intron 20.0%
!!! ATGAAATTTTAAGTGCATTT+TGG + chr6_4:4249388-4249407 Msa0972100:intron 20.0%
!!! TGTTAAAAAATAGTACCTTT+TGG - chr6_4:4249553-4249572 None:intergenic 20.0%
!!! ATATTTGTCATTTGTGTATT+AGG - chr6_4:4249759-4249778 None:intergenic 20.0%
!! TATATTTGAATGAAATGAGA+AGG + chr6_4:4250279-4250298 Msa0972100:intron 20.0%
!!! AATGTTAGTTTAGAATTAAG+AGG + chr6_4:4250653-4250672 Msa0972100:intron 20.0%
!! CTTGATCTTGATTTATATAT+AGG + chr6_4:4250866-4250885 Msa0972100:intron 20.0%
!!! GTAACAAATATTGGTTTATT+CGG + chr6_4:4250896-4250915 Msa0972100:intron 20.0%
!!! GACAAACTATTTTAAATCAA+GGG - chr6_4:4251061-4251080 None:intergenic 20.0%
!!! TGACAAACTATTTTAAATCA+AGG - chr6_4:4251062-4251081 None:intergenic 20.0%
!!! TGGAATATATCATTTTATGT+TGG + chr6_4:4251658-4251677 Msa0972100:intron 20.0%
!!! ATTCTTTTATGTTCTATTTG+TGG + chr6_4:4252269-4252288 Msa0972100:intron 20.0%
!!! TTTAAGACTAAAGTATACTT+GGG - chr6_4:4252342-4252361 None:intergenic 20.0%
!!! ATTTAAGACTAAAGTATACT+TGG - chr6_4:4252343-4252362 None:intergenic 20.0%
!! ATGATAAATGAACAACTTAA+TGG + chr6_4:4252516-4252535 Msa0972100:intron 20.0%
!! TCAGAAAAAGAAAATTCAAA+AGG - chr6_4:4253478-4253497 None:intergenic 20.0%
!! TCTACATAATATAACTGATT+TGG + chr6_4:4254034-4254053 Msa0972100:intron 20.0%
!!! AATTTTTAAAGTTGCAACTT+GGG - chr6_4:4254225-4254244 None:intergenic 20.0%
!! TAAGACAAACTCTTAAAATT+GGG - chr6_4:4254774-4254793 None:intergenic 20.0%
!! ATAAGACAAACTCTTAAAAT+TGG - chr6_4:4254775-4254794 None:intergenic 20.0%
!! AAGATTCTCCAAATCAATTT+TGG - chr6_4:4247695-4247714 None:intergenic 25.0%
! TCAACAACATAATCATAACA+TGG - chr6_4:4247718-4247737 None:intergenic 25.0%
! AAAGTTGTTATAGGTAACAA+TGG + chr6_4:4247916-4247935 Msa0972100:intron 25.0%
! TCTATACCAATATTTCAAGA+TGG - chr6_4:4247964-4247983 None:intergenic 25.0%
!! TTAATCACGTCTAATTTTCA+AGG + chr6_4:4248887-4248906 Msa0972100:intron 25.0%
!!! TTATGCCTAAGTTTGTTATA+AGG + chr6_4:4249256-4249275 Msa0972100:intron 25.0%
!!! TAAGTATGGGAATTGATTTT+CGG - chr6_4:4249479-4249498 None:intergenic 25.0%
! TGCAAACTAAAAGTTAAAGA+AGG + chr6_4:4249620-4249639 Msa0972100:intron 25.0%
! GCAAACTAAAAGTTAAAGAA+GGG + chr6_4:4249621-4249640 Msa0972100:intron 25.0%
! AAAAAGTTCACTCTTTCTTA+TGG + chr6_4:4249920-4249939 Msa0972100:intron 25.0%
! TTTGTACTATAAAGAAACTG+AGG + chr6_4:4249978-4249997 Msa0972100:intron 25.0%
! ATAAAGAAACTGAGGAAAAT+TGG + chr6_4:4249986-4250005 Msa0972100:intron 25.0%
! AATTAAATGTAGCAAGACAT+TGG - chr6_4:4250017-4250036 None:intergenic 25.0%
! TGTACTAATATTTGTAGGAA+TGG + chr6_4:4250313-4250332 Msa0972100:intron 25.0%
! TTTGCAACATAATCATAACA+TGG - chr6_4:4250407-4250426 None:intergenic 25.0%
! GATTATGTTGCAAAAGAAAA+TGG + chr6_4:4250413-4250432 Msa0972100:CDS 25.0%
! TGAAAAATGTGCTTACAAAT+AGG - chr6_4:4250506-4250525 None:intergenic 25.0%
! AAAGTTGTTATACGTAACAA+TGG + chr6_4:4250608-4250627 Msa0972100:CDS 25.0%
! AGAAATTATCCCATCTAATA+TGG + chr6_4:4250743-4250762 Msa0972100:intron 25.0%
!! TACTCTTTTCAATGAAAAAG+TGG + chr6_4:4250804-4250823 Msa0972100:intron 25.0%
!!! AAAAGTGGCTAATATTTTGA+AGG + chr6_4:4250819-4250838 Msa0972100:intron 25.0%
! GGAAAAGAAGTAACAAATAT+TGG + chr6_4:4250887-4250906 Msa0972100:intron 25.0%
! GCAAGTAAATAACTAAAAAG+TGG + chr6_4:4251340-4251359 Msa0972100:intron 25.0%
! GCAAGTAAATAACTAAAAAG+TGG + chr6_4:4251340-4251359 Msa0972100:intron 25.0%
! TTCTTATCAAATTAGCATCT+AGG - chr6_4:4252298-4252317 None:intergenic 25.0%
! TTAAGACTAAAGTATACTTG+GGG - chr6_4:4252341-4252360 None:intergenic 25.0%
! TTTATCAAGTAATGCTTGAT+CGG + chr6_4:4252397-4252416 Msa0972100:intron 25.0%
!!! TCTTTTTAGTGTTATCTGAT+AGG - chr6_4:4252428-4252447 None:intergenic 25.0%
!! CTTACAAAGACTCTTTTTAA+TGG + chr6_4:4252490-4252509 Msa0972100:intron 25.0%
! AAGTCAGTCATGTATTTAAA+AGG - chr6_4:4252698-4252717 None:intergenic 25.0%
! TTCATATTAGAGTTGTCAAT+TGG - chr6_4:4252937-4252956 None:intergenic 25.0%
! TTAAAATAATGTACAAGAGG+TGG - chr6_4:4253018-4253037 None:intergenic 25.0%
!!! GTTTTAAACAATTCTCTAAG+GGG - chr6_4:4253110-4253129 None:intergenic 25.0%
!!! CGTTTTAAACAATTCTCTAA+GGG - chr6_4:4253111-4253130 None:intergenic 25.0%
!!! TCGTTTTAAACAATTCTCTA+AGG - chr6_4:4253112-4253131 None:intergenic 25.0%
! AGTTAAATGTCAACATAGTT+GGG - chr6_4:4253232-4253251 None:intergenic 25.0%
! TAGTTAAATGTCAACATAGT+TGG - chr6_4:4253233-4253252 None:intergenic 25.0%
!!! ATCTTTTGATGATTTTTGTC+TGG - chr6_4:4253328-4253347 None:intergenic 25.0%
! AGAACAACAAATTGAATTTC+CGG - chr6_4:4253813-4253832 None:intergenic 25.0%
!!! GAATTTTTAAAGTTGCAACT+TGG - chr6_4:4254226-4254245 None:intergenic 25.0%
!! TATTTTATTGAAAAGTGGTG+TGG + chr6_4:4254528-4254547 Msa0972100:intron 25.0%
!! ATTTTATTGAAAAGTGGTGT+GGG + chr6_4:4254529-4254548 Msa0972100:intron 25.0%
! TCATTGTGGAAAAAAAATTG+GGG - chr6_4:4254605-4254624 None:intergenic 25.0%
! CTCATTGTGGAAAAAAAATT+GGG - chr6_4:4254606-4254625 None:intergenic 25.0%
!!! CAATTTTTTTTCCACAATGA+GGG + chr6_4:4254605-4254624 Msa0972100:intron 25.0%
! GCTCTATTACTAATATTTGT+AGG + chr6_4:4254901-4254920 Msa0972100:intron 25.0%
! AGTTATATGAGTATGAGATT+AGG + chr6_4:4254967-4254986 Msa0972100:CDS 25.0%
! TTTGCAACATAATCATAACA+TGG - chr6_4:4250407-4250426 None:intergenic 25.0%
! GATTATGTTGCAAAAGAAAA+TGG + chr6_4:4250413-4250432 Msa0972100:CDS 25.0%
! AACAAATTGCACAATCTAAA+GGG - chr6_4:4255095-4255114 None:intergenic 25.0%
! AAACAAATTGCACAATCTAA+AGG - chr6_4:4255096-4255115 None:intergenic 25.0%
!! TTTAGATTGTGCAATTTGTT+TGG + chr6_4:4255095-4255114 Msa0972100:CDS 25.0%
! AAAGTTGTTATAGGTAACAA+TGG + chr6_4:4247916-4247935 Msa0972100:intron 25.0%
! TATTGATTGTGCAATTTGCT+TGG + chr6_4:4247753-4247772 Msa0972100:CDS 30.0%
TGAAAACTATGCTTGCAAAT+AGG - chr6_4:4247814-4247833 None:intergenic 30.0%
GATCTACAAATTGGACAAAT+GGG - chr6_4:4247871-4247890 None:intergenic 30.0%
AGATCTACAAATTGGACAAA+TGG - chr6_4:4247872-4247891 None:intergenic 30.0%
CCAATCATAGATCTACAAAT+TGG - chr6_4:4247880-4247899 None:intergenic 30.0%
CCAATTTGTAGATCTATGAT+TGG + chr6_4:4247877-4247896 Msa0972100:CDS 30.0%
AGAAATTATGTTTACCGCAA+GGG - chr6_4:4248084-4248103 None:intergenic 30.0%
AAGAAATTATGTTTACCGCA+AGG - chr6_4:4248085-4248104 None:intergenic 30.0%
!! CTACAACTTGTTAGTTTAGT+TGG + chr6_4:4248181-4248200 Msa0972100:intron 30.0%
TTAAAAAACAGTTCGACACT+TGG + chr6_4:4248255-4248274 Msa0972100:intron 30.0%
TAAAAAACAGTTCGACACTT+GGG + chr6_4:4248256-4248275 Msa0972100:intron 30.0%
ACATGTGTCTAATATGAACT+TGG - chr6_4:4248730-4248749 None:intergenic 30.0%
GTGTCTAATATGAATGAACT+CGG - chr6_4:4248792-4248811 None:intergenic 30.0%
ACATGTGTCTAATATGAACT+CGG - chr6_4:4248730-4248749 None:intergenic 30.0%
TCAAGTTAATTACACTCAGT+TGG + chr6_4:4248948-4248967 Msa0972100:intron 30.0%
AGAGAATGTTTATGCCTAAA+AGG + chr6_4:4249161-4249180 Msa0972100:intron 30.0%
! CGATAATCTACTATCCTTTT+AGG - chr6_4:4249178-4249197 None:intergenic 30.0%
AAAGGATAGTAGATTATCGA+AGG + chr6_4:4249179-4249198 Msa0972100:intron 30.0%
!! CTTGGTGTTATGATAAGTAT+GGG - chr6_4:4249492-4249511 None:intergenic 30.0%
!! ACTTGGTGTTATGATAAGTA+TGG - chr6_4:4249493-4249512 None:intergenic 30.0%
!! TTTTGGTTGAGTGTAGTAAA+GGG - chr6_4:4249536-4249555 None:intergenic 30.0%
GAAGGGAATTAATGAGAAAA+AGG + chr6_4:4249638-4249657 Msa0972100:intron 30.0%
! CAAGTTGAAGCAAAAAATCA+CGG - chr6_4:4249687-4249706 None:intergenic 30.0%
AACAATGAACCTATTGTATG+AGG - chr6_4:4249809-4249828 None:intergenic 30.0%
! TTTTCTCGTCTTTAACTCTT+TGG - chr6_4:4249904-4249923 None:intergenic 30.0%
ACTCAAAAGGTGACAAAAAA+AGG + chr6_4:4250072-4250091 Msa0972100:intron 30.0%
AAGCATTTCCAAAACTGATT+TGG + chr6_4:4250373-4250392 Msa0972100:CDS 30.0%
GATCTACAAATAGGACAAAT+TGG - chr6_4:4250563-4250582 None:intergenic 30.0%
TGTAAAGTTGCAACTATCTA+AGG + chr6_4:4251148-4251167 Msa0972100:intron 30.0%
GTAAAGTTGCAACTATCTAA+GGG + chr6_4:4251149-4251168 Msa0972100:intron 30.0%
TAAAGTTGCAACTATCTAAG+GGG + chr6_4:4251150-4251169 Msa0972100:intron 30.0%
!!! TCAACTTTTTTATCCAGCAA+CGG - chr6_4:4251187-4251206 None:intergenic 30.0%
TTTCCTTATGTTGTAGAGAT+TGG + chr6_4:4251226-4251245 Msa0972100:intron 30.0%
TTATAGCAACATACACCTTA+GGG - chr6_4:4251375-4251394 None:intergenic 30.0%
TTTATAGCAACATACACCTT+AGG - chr6_4:4251376-4251395 None:intergenic 30.0%
ACCTTCTAACAAAAACAAGT+GGG + chr6_4:4251398-4251417 Msa0972100:intron 30.0%
ACTCCCACATAAAAACTAAT+GGG + chr6_4:4251546-4251565 Msa0972100:intron 30.0%
!!! ACACCCATTAGTTTTTATGT+GGG - chr6_4:4251552-4251571 None:intergenic 30.0%
!! ACAATGATTTGCTTGTTAGA+TGG + chr6_4:4251774-4251793 Msa0972100:intron 30.0%
TCAAGAGTCTAACCTATTAA+CGG + chr6_4:4251997-4252016 Msa0972100:intron 30.0%
TGAAAAACTGAAGTGGAATA+TGG + chr6_4:4252203-4252222 Msa0972100:intron 30.0%
TAAGACTAAAGTATACTTGG+GGG - chr6_4:4252340-4252359 None:intergenic 30.0%
GCATTACTTGATAAAGGTTA+GGG - chr6_4:4252392-4252411 None:intergenic 30.0%
AGCATTACTTGATAAAGGTT+AGG - chr6_4:4252393-4252412 None:intergenic 30.0%
GATCAAGCATTACTTGATAA+AGG - chr6_4:4252398-4252417 None:intergenic 30.0%
CAGATAACACTAAAAAGACA+AGG + chr6_4:4252430-4252449 Msa0972100:intron 30.0%
CCTTTAACCGTATGAAAATA+CGG - chr6_4:4252551-4252570 None:intergenic 30.0%
!!! CTACATTTTGAAATATGGGT+CGG + chr6_4:4252792-4252811 Msa0972100:intron 30.0%
!!! TACATTTTGAAATATGGGTC+GGG + chr6_4:4252793-4252812 Msa0972100:intron 30.0%
!! TCATATAAATGGATTGGAGT+GGG - chr6_4:4252895-4252914 None:intergenic 30.0%
! TTTGATTAAAGTGTCTCTGA+TGG - chr6_4:4253135-4253154 None:intergenic 30.0%
TAACTTATCTCCTAGCTTAT+CGG - chr6_4:4253185-4253204 None:intergenic 30.0%
TATTGAGTATGTGGTATAAG+AGG - chr6_4:4253263-4253282 None:intergenic 30.0%
!! ATCAGAATGGATTTTTACGT+AGG - chr6_4:4253382-4253401 None:intergenic 30.0%
TGCACAATGTTAAGATGTTA+GGG - chr6_4:4253673-4253692 None:intergenic 30.0%
TTGCACAATGTTAAGATGTT+AGG - chr6_4:4253674-4253693 None:intergenic 30.0%
!! AATTCAATTTGTTGTTCTGC+TGG + chr6_4:4253815-4253834 Msa0972100:intron 30.0%
! TCTGAATTTGCATTTTGTAG+AGG + chr6_4:4253844-4253863 Msa0972100:intron 30.0%
! ATTGTTATCAATTTAGGGCA+TGG + chr6_4:4254003-4254022 Msa0972100:intron 30.0%
TTGATCGAATATAGAGAACT+TGG - chr6_4:4254262-4254281 None:intergenic 30.0%
GATCAATATAGTTAGACTCT+CGG + chr6_4:4254276-4254295 Msa0972100:intron 30.0%
! TATTAACTTGACTGTGTTGT+AGG - chr6_4:4254309-4254328 None:intergenic 30.0%
! TAATATTAGAGCATCCACAA+TGG + chr6_4:4254324-4254343 Msa0972100:intron 30.0%
AAAAAGTGATATGTCCATGT+GGG - chr6_4:4254380-4254399 None:intergenic 30.0%
AAAAAAGTGATATGTCCATG+TGG - chr6_4:4254381-4254400 None:intergenic 30.0%
AGTGGTTGATTACCTATTAT+AGG - chr6_4:4254424-4254443 None:intergenic 30.0%
TGGAATCCATTTAGATATAG+AGG - chr6_4:4254458-4254477 None:intergenic 30.0%
! TTTTATTGAAAAGTGGTGTG+GGG + chr6_4:4254530-4254549 Msa0972100:intron 30.0%
TTAAGACACTCAATCTTAAG+TGG - chr6_4:4254557-4254576 None:intergenic 30.0%
CATTGTGGAAAAAAAATTGG+GGG - chr6_4:4254604-4254623 None:intergenic 30.0%
CCTCATTGTGGAAAAAAAAT+TGG - chr6_4:4254607-4254626 None:intergenic 30.0%
!!! CCAATTTTTTTTCCACAATG+AGG + chr6_4:4254604-4254623 Msa0972100:intron 30.0%
TATAGTGAACAGTTTCTCTT+TGG + chr6_4:4254720-4254739 Msa0972100:intron 30.0%
CAGGAAAACATATACGAAAT+AGG - chr6_4:4254942-4254961 None:intergenic 30.0%
! TCTCTAAATCAACTTTGGAA+AGG - chr6_4:4255029-4255048 None:intergenic 30.0%
AAGCTTCTCTAAATCAACTT+TGG - chr6_4:4255034-4255053 None:intergenic 30.0%
TGTTTGGAGAATTTCACTAT+TGG + chr6_4:4255111-4255130 Msa0972100:CDS 30.0%
GTTTGGAGAATTTCACTATT+GGG + chr6_4:4255112-4255131 Msa0972100:CDS 30.0%
TTTGGAGAATTTCACTATTG+GGG + chr6_4:4255113-4255132 Msa0972100:CDS 30.0%
AGATCTACAAATTGGACAAA+TGG - chr6_4:4247872-4247891 None:intergenic 30.0%
TTGTCCAATTTGTAGATCTA+TGG + chr6_4:4247873-4247892 Msa0972100:CDS 30.0%
AGTGCAAACAAAGTTGTTAT+AGG + chr6_4:4250599-4250618 Msa0972100:CDS 30.0%
TGTGATTCTACTTCAAATGT+TGG - chr6_4:4255345-4255364 None:intergenic 30.0%
TGCTTGGAGAATTTCACTAT+TGG + chr6_4:4247769-4247788 Msa0972100:CDS 35.0%
GCTTGGAGAATTTCACTATT+GGG + chr6_4:4247770-4247789 Msa0972100:CDS 35.0%
CTTGGAGAATTTCACTATTG+GGG + chr6_4:4247771-4247790 Msa0972100:CDS 35.0%
! TAGTTTTCATGCTCAATGTG+TGG + chr6_4:4247825-4247844 Msa0972100:CDS 35.0%
! TCTATGATTGGTTCTCATAG+TGG + chr6_4:4247889-4247908 Msa0972100:CDS 35.0%
AGTGGAGACAAAGTTGTTAT+AGG + chr6_4:4247907-4247926 Msa0972100:CDS 35.0%
GGAAGAGAAATCATAGAAAG+TGG + chr6_4:4247937-4247956 Msa0972100:intron 35.0%
AGTGGTCCATCTTGAAATAT+TGG + chr6_4:4247955-4247974 Msa0972100:intron 35.0%
TGTATTTCATCTCTCTTGCA+TGG + chr6_4:4248137-4248156 Msa0972100:intron 35.0%
AGTGTTAAAACACTCGATAG+AGG - chr6_4:4248163-4248182 None:intergenic 35.0%
ATTTAGTGTTCGAGTCTCTA+TGG + chr6_4:4248404-4248423 Msa0972100:intron 35.0%
! AGTCTCTATGGTGCTAATTT+GGG + chr6_4:4248416-4248435 Msa0972100:intron 35.0%
TTACATTCTCGAGAACACAT+TGG + chr6_4:4249137-4249156 Msa0972100:intron 35.0%
TCACATTCTCGAGAATACAT+TGG + chr6_4:4249223-4249242 Msa0972100:intron 35.0%
TGCTAGTCAACTATAGAACT+TGG - chr6_4:4249510-4249529 None:intergenic 35.0%
TTTGGTTGAGTGTAGTAAAG+GGG - chr6_4:4249535-4249554 None:intergenic 35.0%
!! CTTTTGGTTGAGTGTAGTAA+AGG - chr6_4:4249537-4249556 None:intergenic 35.0%
CTTTACTACACTCAACCAAA+AGG + chr6_4:4249535-4249554 Msa0972100:intron 35.0%
TCATTTGTGTATTAGGTGAC+TGG - chr6_4:4249752-4249771 None:intergenic 35.0%
TTCCTCAATCAAGACTCAAA+AGG + chr6_4:4250059-4250078 Msa0972100:intron 35.0%
! AAGCTTCTCCAAATCAGTTT+TGG - chr6_4:4250384-4250403 None:intergenic 35.0%
AGAAAATGGAAGTAACCCTT+TGG + chr6_4:4250427-4250446 Msa0972100:CDS 35.0%
AGCAAATTGCACAATCCAAA+GGG - chr6_4:4250445-4250464 None:intergenic 35.0%
AAGCAAATTGCACAATCCAA+AGG - chr6_4:4250446-4250465 None:intergenic 35.0%
! TTTGGATTGTGCAATTTGCT+TGG + chr6_4:4250445-4250464 Msa0972100:CDS 35.0%
TGCTTGGAGAATTTCACTAT+TGG + chr6_4:4247769-4247788 Msa0972100:CDS 35.0%
GCTTGGAGAATTTCACTATT+GGG + chr6_4:4247770-4247789 Msa0972100:CDS 35.0%
CTTGGAGAATTTCACTATTG+GGG + chr6_4:4247771-4247790 Msa0972100:CDS 35.0%
! CATTTTTCATGCTCAATGTG+TGG + chr6_4:4250517-4250536 Msa0972100:intron 35.0%
TTTGTCCTATTTGTAGATCC+AGG + chr6_4:4250564-4250583 Msa0972100:intron 35.0%
TTGTCCTATTTGTAGATCCA+GGG + chr6_4:4250565-4250584 Msa0972100:intron 35.0%
ACGTAACAATGGAAGAGAAA+TGG + chr6_4:4250619-4250638 Msa0972100:CDS 35.0%
TGTGATTCTACTTCTTATGC+TGG - chr6_4:4250686-4250705 None:intergenic 35.0%
! GAATCACAAGAGCATGAATT+AGG + chr6_4:4250698-4250717 Msa0972100:intron 35.0%
! ACAAGAGCATGAATTAGGTA+AGG + chr6_4:4250703-4250722 Msa0972100:intron 35.0%
CATGAATTAGGTAAGGCATA+GGG + chr6_4:4250710-4250729 Msa0972100:intron 35.0%
!! AGTGGCTAATATTTTGAAGG+TGG + chr6_4:4250822-4250841 Msa0972100:intron 35.0%
! TTTATCCAGCAACGGATTTA+GGG - chr6_4:4251179-4251198 None:intergenic 35.0%
!! TTTTATCCAGCAACGGATTT+AGG - chr6_4:4251180-4251199 None:intergenic 35.0%
AAGTGGTTAAATACACCCTA+AGG + chr6_4:4251357-4251376 Msa0972100:intron 35.0%
CACCTTCTAACAAAAACAAG+TGG + chr6_4:4251397-4251416 Msa0972100:intron 35.0%
!!! ACCCACTTGTTTTTGTTAGA+AGG - chr6_4:4251402-4251421 None:intergenic 35.0%
TGTGTTCTAGCAAATCCTAT+AGG + chr6_4:4251421-4251440 Msa0972100:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr6_4:4251457-4251476 Msa0972100:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr6_4:4251463-4251482 None:intergenic 35.0%
AAGTGGTTAATTACACCCTA+AGG + chr6_4:4251506-4251525 Msa0972100:intron 35.0%
TTTAGCAAAGCTACACCTTA+GGG - chr6_4:4251524-4251543 None:intergenic 35.0%
! TTTTAGCAAAGCTACACCTT+AGG - chr6_4:4251525-4251544 None:intergenic 35.0%
CACTCCCACATAAAAACTAA+TGG + chr6_4:4251545-4251564 Msa0972100:intron 35.0%
!!! CACACCCATTAGTTTTTATG+TGG - chr6_4:4251553-4251572 None:intergenic 35.0%
TGTTCAACTCAGCAATCAAT+AGG - chr6_4:4251757-4251776 None:intergenic 35.0%
ACTAGTGAACTTGTGTATGT+TGG + chr6_4:4251967-4251986 Msa0972100:intron 35.0%
CAAGAGTCTAACCTATTAAC+GGG + chr6_4:4251998-4252017 Msa0972100:intron 35.0%
TCATCGAGTGAATTTGAACT+CGG - chr6_4:4252024-4252043 None:intergenic 35.0%
TGTAATGAGGAGACACAAAT+AGG - chr6_4:4252077-4252096 None:intergenic 35.0%
GAATTGGTGAAAAACTGAAG+TGG + chr6_4:4252196-4252215 Msa0972100:intron 35.0%
CCTCAAAATTCGCTTTCAAA+TGG - chr6_4:4252244-4252263 None:intergenic 35.0%
! CCATTTGAAAGCGAATTTTG+AGG + chr6_4:4252241-4252260 Msa0972100:intron 35.0%
AAGACTAAAGTATACTTGGG+GGG - chr6_4:4252339-4252358 None:intergenic 35.0%
! CCGTATTTTCATACGGTTAA+AGG + chr6_4:4252548-4252567 Msa0972100:intron 35.0%
! TCTTTTCCATCGAGCAATTA+AGG - chr6_4:4252626-4252645 None:intergenic 35.0%
TTTGTAGTCCATGAATCAAG+TGG + chr6_4:4252864-4252883 Msa0972100:intron 35.0%
!! CTCATATAAATGGATTGGAG+TGG - chr6_4:4252896-4252915 None:intergenic 35.0%
CTCCAATCCATTTATATGAG+CGG + chr6_4:4252896-4252915 Msa0972100:intron 35.0%
AATGAGACCGCTCATATAAA+TGG - chr6_4:4252906-4252925 None:intergenic 35.0%
! GCATAATTTTGTGACCACAA+GGG - chr6_4:4252990-4253009 None:intergenic 35.0%
! AGCATAATTTTGTGACCACA+AGG - chr6_4:4252991-4253010 None:intergenic 35.0%
AGCTTATCGGAAAAAAGTTG+AGG - chr6_4:4253172-4253191 None:intergenic 35.0%
!!! CAACTTTTTTCCGATAAGCT+AGG + chr6_4:4253172-4253191 Msa0972100:intron 35.0%
GCTTATCAAACTCGTTCTTA+GGG - chr6_4:4253453-4253472 None:intergenic 35.0%
AGCTTATCAAACTCGTTCTT+AGG - chr6_4:4253454-4253473 None:intergenic 35.0%
CACCTTAAATCAACAGATGT+TGG + chr6_4:4253547-4253566 Msa0972100:intron 35.0%
!! GTCCAACATCTGTTGATTTA+AGG - chr6_4:4253552-4253571 None:intergenic 35.0%
TTATCTAAGTGTTCCTGATG+TGG + chr6_4:4253719-4253738 Msa0972100:intron 35.0%
ACAACATCATTAACCAATGC+TGG + chr6_4:4253764-4253783 Msa0972100:intron 35.0%
! GAATTTGCATTTTGTAGAGG+AGG + chr6_4:4253847-4253866 Msa0972100:intron 35.0%
TCGATGCTAATACTAAGACA+CGG - chr6_4:4253879-4253898 None:intergenic 35.0%
GAAAAATATGGATGTCTCAC+CGG - chr6_4:4253917-4253936 None:intergenic 35.0%
! CTGACATTTGAGGTCTTAAA+CGG + chr6_4:4254352-4254371 Msa0972100:intron 35.0%
! TGACATTTGAGGTCTTAAAC+GGG + chr6_4:4254353-4254372 Msa0972100:intron 35.0%
TAGATATAGAGGATCTCCAT+TGG - chr6_4:4254447-4254466 None:intergenic 35.0%
GGAGATCCTCTATATCTAAA+TGG + chr6_4:4254449-4254468 Msa0972100:intron 35.0%
! GGTCTTTACTATTTAAGACC+CGG - chr6_4:4254644-4254663 None:intergenic 35.0%
!! GTTTCTCTTTGGCTGATTTT+TGG + chr6_4:4254731-4254750 Msa0972100:intron 35.0%
!! ATTTGTAGGACTAGTGCTTT+TGG + chr6_4:4254915-4254934 Msa0972100:intron 35.0%
ATACTCATATAACTCTCAGC+AGG - chr6_4:4254961-4254980 None:intergenic 35.0%
ATTAGGAAGAGCAACAACAA+TGG + chr6_4:4254984-4255003 Msa0972100:CDS 35.0%
! AGCAACAACAATGGTTGATA+GGG + chr6_4:4254993-4255012 Msa0972100:CDS 35.0%
TGAAAATTGTGCTTGCAAGT+AGG - chr6_4:4255156-4255175 None:intergenic 35.0%
! CAATTTTCATGCTCAATGTG+TGG + chr6_4:4255167-4255186 Msa0972100:CDS 35.0%
CCAACCATAGATCTACAAAT+TGG - chr6_4:4255222-4255241 None:intergenic 35.0%
CCAATTTGTAGATCTATGGT+TGG + chr6_4:4255219-4255238 Msa0972100:CDS 35.0%
ATGCTCAATGTGTGGATCAA+TGG + chr6_4:4247833-4247852 Msa0972100:CDS 40.0%
!! TTGACCTAGTGGTATTGACT+TGG + chr6_4:4248279-4248298 Msa0972100:intron 40.0%
!! TGACCTAGTGGTATTGACTT+GGG + chr6_4:4248280-4248299 Msa0972100:intron 40.0%
! AGTATCTCTGGTGCCAATTT+GGG + chr6_4:4248340-4248359 Msa0972100:intron 40.0%
CTAAATTACCCCACCCAAAT+TGG - chr6_4:4248356-4248375 None:intergenic 40.0%
! GAGTCTCTATGGTGCTAATT+TGG + chr6_4:4248415-4248434 Msa0972100:intron 40.0%
! TCTATGGTGCTAATTTGGGT+GGG + chr6_4:4248420-4248439 Msa0972100:intron 40.0%
! GTGGGCTAATTTAGCTTCTT+GGG + chr6_4:4248438-4248457 Msa0972100:intron 40.0%
! GCTAATTTAGCTTCTTGGGT+GGG + chr6_4:4248442-4248461 Msa0972100:intron 40.0%
TTGGTTGAGTGTAGTAAAGG+GGG - chr6_4:4249534-4249553 None:intergenic 40.0%
TTGTGTATTAGGTGACTGGA+AGG - chr6_4:4249748-4249767 None:intergenic 40.0%
CTTGAGTCACCTCATACAAT+AGG + chr6_4:4249797-4249816 Msa0972100:intron 40.0%
TGAGGAAATTCTTCTGCTTC+TGG - chr6_4:4250046-4250065 None:intergenic 40.0%
!! CACCTTTTGAGTCTTGATTG+AGG - chr6_4:4250064-4250083 None:intergenic 40.0%
ATGCTCAATGTGTGGATAAG+TGG + chr6_4:4250525-4250544 Msa0972100:intron 40.0%
CAAACCCTGGATCTACAAAT+AGG - chr6_4:4250572-4250591 None:intergenic 40.0%
GCATGAATTAGGTAAGGCAT+AGG + chr6_4:4250709-4250728 Msa0972100:intron 40.0%
CGTAGCTAGCCATATTAGAT+GGG - chr6_4:4250755-4250774 None:intergenic 40.0%
TCGTAGCTAGCCATATTAGA+TGG - chr6_4:4250756-4250775 None:intergenic 40.0%
GCTCCAATCTCTACAACATA+AGG - chr6_4:4251232-4251251 None:intergenic 40.0%
!!! ACACCCACTAGTTTTCATGT+GGG + chr6_4:4251308-4251327 Msa0972100:intron 40.0%
ACTCCCACATGAAAACTAGT+GGG - chr6_4:4251314-4251333 None:intergenic 40.0%
GTGTTCTAGCAAATGCCTAT+AGG - chr6_4:4251439-4251458 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr6_4:4251456-4251475 Msa0972100:intron 40.0%
CACTCCCACATAAAAACTAG+TGG - chr6_4:4251464-4251483 None:intergenic 40.0%
GGATTCTCAAGCTTGTAATG+AGG - chr6_4:4252090-4252109 None:intergenic 40.0%
ACAAGCTTGAGAATCCTAAC+TGG + chr6_4:4252094-4252113 Msa0972100:intron 40.0%
TGTTTGCAACATGACCAGTT+AGG - chr6_4:4252111-4252130 None:intergenic 40.0%
AGTTGGGTTTGAAAGGGAAT+TGG + chr6_4:4252180-4252199 Msa0972100:intron 40.0%
! GTCCACACCGTATTTTCATA+CGG + chr6_4:4252541-4252560 Msa0972100:intron 40.0%
AACCGTATGAAAATACGGTG+TGG - chr6_4:4252546-4252565 None:intergenic 40.0%
GATGGAAAAGATACTGTGTG+TGG + chr6_4:4252635-4252654 Msa0972100:intron 40.0%
CCAATTAGTAGTGAGCTACA+CGG - chr6_4:4252832-4252851 None:intergenic 40.0%
GACCGCTCATATAAATGGAT+TGG - chr6_4:4252901-4252920 None:intergenic 40.0%
ATCTCGTACAATATCCCTTG+TGG + chr6_4:4252973-4252992 Msa0972100:intron 40.0%
! TAAACCTCGGTTTGTATTGG+AGG - chr6_4:4253417-4253436 None:intergenic 40.0%
TCCAATACAAACCGAGGTTT+AGG + chr6_4:4253416-4253435 Msa0972100:intron 40.0%
! TCCTAAACCTCGGTTTGTAT+TGG - chr6_4:4253420-4253439 None:intergenic 40.0%
ATACAAACCGAGGTTTAGGA+TGG + chr6_4:4253420-4253439 Msa0972100:intron 40.0%
! GTTGATTTAAGGTGCAACTG+CGG - chr6_4:4253541-4253560 None:intergenic 40.0%
TGAATTTCCGGCGATTAACA+AGG - chr6_4:4253801-4253820 None:intergenic 40.0%
TCGACACCAATAACAAATGC+CGG + chr6_4:4253895-4253914 Msa0972100:CDS 40.0%
GTTTGCAATGTATTTGACGC+TGG + chr6_4:4254093-4254112 Msa0972100:intron 40.0%
AAATGTCAGGATCTCCATTG+TGG - chr6_4:4254341-4254360 None:intergenic 40.0%
AATGGAGATCCTGACATTTG+AGG + chr6_4:4254342-4254361 Msa0972100:intron 40.0%
! CGTTTAAGACCTCAAATGTC+AGG - chr6_4:4254354-4254373 None:intergenic 40.0%
TAGGTAATCAACCACTCCAA+TGG + chr6_4:4254428-4254447 Msa0972100:intron 40.0%
! TTTAAGACCCGGTACCTAAT+AGG - chr6_4:4254633-4254652 None:intergenic 40.0%
TAGTAAAGACCCTACCAATG+TGG + chr6_4:4254653-4254672 Msa0972100:intron 40.0%
!! TAAGAGCATCCACATTGGTA+GGG - chr6_4:4254665-4254684 None:intergenic 40.0%
!! GTAACTAAGAGCATCCACAT+TGG - chr6_4:4254670-4254689 None:intergenic 40.0%
ACAAGAAACAGTGATCCAGA+AGG - chr6_4:4254692-4254711 None:intergenic 40.0%
GAGCAACAACAATGGTTGAT+AGG + chr6_4:4254992-4255011 Msa0972100:CDS 40.0%
!! GCAACAACAATGGTTGATAG+GGG + chr6_4:4254994-4255013 Msa0972100:CDS 40.0%
ATGCTCAATGTGTGGATCAA+TGG + chr6_4:4247833-4247852 Msa0972100:CDS 40.0%
! GGAAGAGAAAGCATAGAAAG+TGG + chr6_4:4255279-4255298 Msa0972100:CDS 40.0%
CTAAGTGATGTAGTCCCTTG+CGG + chr6_4:4248067-4248086 Msa0972100:intron 45.0%
AGTCCCAAGTCAATACCACT+AGG - chr6_4:4248286-4248305 None:intergenic 45.0%
!! AGTGGTATTGACTTGGGACT+TGG + chr6_4:4248286-4248305 Msa0972100:intron 45.0%
!! GTGGTATTGACTTGGGACTT+GGG + chr6_4:4248287-4248306 Msa0972100:intron 45.0%
TACTCGAACTTGAGACCTTG+AGG - chr6_4:4248324-4248343 None:intergenic 45.0%
GTCTCAAGTTCGAGTATCTC+TGG + chr6_4:4248328-4248347 Msa0972100:intron 45.0%
! GAGTATCTCTGGTGCCAATT+TGG + chr6_4:4248339-4248358 Msa0972100:intron 45.0%
! CTCTATGGTGCTAATTTGGG+TGG + chr6_4:4248419-4248438 Msa0972100:intron 45.0%
!! GGTGGGCTAATTTAGCTTCT+TGG + chr6_4:4248437-4248456 Msa0972100:intron 45.0%
! GGCTAATTTAGCTTCTTGGG+TGG + chr6_4:4248441-4248460 Msa0972100:intron 45.0%
TTAGGTGACTGGAAGGTTGA+TGG - chr6_4:4249741-4249760 None:intergenic 45.0%
GAATTAGGTAAGGCATAGGG+AGG + chr6_4:4250713-4250732 Msa0972100:intron 45.0%
! TAATATGGCTAGCTACGACG+TGG + chr6_4:4250758-4250777 Msa0972100:intron 45.0%
TAGCTACGACGTGGTGTATT+TGG + chr6_4:4250767-4250786 Msa0972100:intron 45.0%
!!! CACACCCACTAGTTTTCATG+TGG + chr6_4:4251307-4251326 Msa0972100:intron 45.0%
CACTCCCACATGAAAACTAG+TGG - chr6_4:4251315-4251334 None:intergenic 45.0%
GAAGCTGCAGAACTAACTCT+AGG - chr6_4:4251816-4251835 None:intergenic 45.0%
TTTGAACTCGGCCCGTTAAT+AGG - chr6_4:4252012-4252031 None:intergenic 45.0%
AGGAGACACAAATAGGACAC+TGG - chr6_4:4252070-4252089 None:intergenic 45.0%
!! AGAGAAGCATTGCCTGTAGT+TGG + chr6_4:4252163-4252182 Msa0972100:intron 45.0%
!! GAGAAGCATTGCCTGTAGTT+GGG + chr6_4:4252164-4252183 Msa0972100:intron 45.0%
TGCCTGTAGTTGGGTTTGAA+AGG + chr6_4:4252173-4252192 Msa0972100:intron 45.0%
GCCTGTAGTTGGGTTTGAAA+GGG + chr6_4:4252174-4252193 Msa0972100:intron 45.0%
TCCCTTTCAAACCCAACTAC+AGG - chr6_4:4252178-4252197 None:intergenic 45.0%
ATCTCGAGAGTTGTCTGGTT+AGG + chr6_4:4252455-4252474 Msa0972100:intron 45.0%
TCTCGAGAGTTGTCTGGTTA+GGG + chr6_4:4252456-4252475 Msa0972100:intron 45.0%
TGTCAGCCTTAATTGCTCGA+TGG + chr6_4:4252617-4252636 Msa0972100:intron 45.0%
CCGTGTAGCTCACTACTAAT+TGG + chr6_4:4252829-4252848 Msa0972100:intron 45.0%
TATGAGCGGTCTCATTCGAT+CGG + chr6_4:4252910-4252929 Msa0972100:intron 45.0%
ATCCATTCTGATCTCGAGAG+AGG + chr6_4:4253390-4253409 Msa0972100:intron 45.0%
CAGCTCCATTTCTTTCAGCA+GGG + chr6_4:4253572-4253591 Msa0972100:intron 45.0%
TCCATTTCTTTCAGCAGGGT+TGG + chr6_4:4253576-4253595 Msa0972100:intron 45.0%
TCCAACCCTGCTGAAAGAAA+TGG - chr6_4:4253580-4253599 None:intergenic 45.0%
CAGCTCCATTTCTTTCAGCA+GGG + chr6_4:4253572-4253591 Msa0972100:intron 45.0%
TCCATTTCTTTCAGCAGGGT+TGG + chr6_4:4253576-4253595 Msa0972100:intron 45.0%
TCCAACCCTGCTGAAAGAAA+TGG - chr6_4:4253580-4253599 None:intergenic 45.0%
! TTGGATCAACTGGCTCTTCT+GGG + chr6_4:4253634-4253653 Msa0972100:intron 45.0%
TCTAAGTGTTCCTGATGTGG+TGG + chr6_4:4253722-4253741 Msa0972100:intron 45.0%
CTTCCATCCTTGTTAATCGC+CGG + chr6_4:4253791-4253810 Msa0972100:intron 45.0%
TTTCCGGCGATTAACAAGGA+TGG - chr6_4:4253797-4253816 None:intergenic 45.0%
! TGCATTTTGTAGAGGAGGAG+TGG + chr6_4:4253852-4253871 Msa0972100:intron 45.0%
! GCATTTTGTAGAGGAGGAGT+GGG + chr6_4:4253853-4253872 Msa0972100:intron 45.0%
!! GTCTCACCGGCATTTGTTAT+TGG - chr6_4:4253904-4253923 None:intergenic 45.0%
ATAGAGGATCTCCATTGGAG+TGG - chr6_4:4254442-4254461 None:intergenic 45.0%
TGGGGGTCTCTTAAGACTTA+GGG - chr6_4:4254587-4254606 None:intergenic 45.0%
TTGGGGGTCTCTTAAGACTT+AGG - chr6_4:4254588-4254607 None:intergenic 45.0%
CCTAATAGGTACCCTCATTG+TGG - chr6_4:4254619-4254638 None:intergenic 45.0%
!! CCACAATGAGGGTACCTATT+AGG + chr6_4:4254616-4254635 Msa0972100:intron 45.0%
!! TGAGGGTACCTATTAGGTAC+CGG + chr6_4:4254622-4254641 Msa0972100:intron 45.0%
!! CTAAGAGCATCCACATTGGT+AGG - chr6_4:4254666-4254685 None:intergenic 45.0%
GGATGCTCTTAGTTACCTTC+TGG + chr6_4:4254674-4254693 Msa0972100:intron 45.0%
!! GCATCATTGAGTGCTGAGAA+TGG + chr6_4:4254867-4254886 Msa0972100:intron 45.0%
! GTGTGGATCAATGGCTTTTG+AGG + chr6_4:4247842-4247861 Msa0972100:CDS 45.0%
!! TATATATATATATATATATG+GGG - chr6_4:4251275-4251294 None:intergenic 5.0%
!! TTCAAAAAAAAAAAAAAAAT+GGG - chr6_4:4251720-4251739 None:intergenic 5.0%
!! ATTCAAAAAAAAAAAAAAAA+TGG - chr6_4:4251721-4251740 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTGAAT+CGG + chr6_4:4251721-4251740 Msa0972100:intron 5.0%
!! TCAATATATATTATTAAAAA+GGG + chr6_4:4253277-4253296 Msa0972100:intron 5.0%
!!! TTTAAAATTATATAACTTAT+AGG + chr6_4:4253974-4253993 Msa0972100:intron 5.0%
TCGAACTTGAGACCTTGAGG+AGG - chr6_4:4248321-4248340 None:intergenic 50.0%
! ATCTCTGGTGCCAATTTGGG+TGG + chr6_4:4248343-4248362 Msa0972100:intron 50.0%
! TCTCTGGTGCCAATTTGGGT+GGG + chr6_4:4248344-4248363 Msa0972100:intron 50.0%
!! TGGAAGGTTGATGGAGTGAG+TGG - chr6_4:4249732-4249751 None:intergenic 50.0%
TGCACTGTGAGAACAAACCC+TGG - chr6_4:4250585-4250604 None:intergenic 50.0%
AGGTAAGGCATAGGGAGGAA+AGG + chr6_4:4250718-4250737 Msa0972100:intron 50.0%
GGATACCCTAAATCCGTTGC+TGG + chr6_4:4251171-4251190 Msa0972100:intron 50.0%
AGTTCTGCAGCTTCTGCTCA+TGG + chr6_4:4251822-4251841 Msa0972100:intron 50.0%
GTTCTGCAGCTTCTGCTCAT+GGG + chr6_4:4251823-4251842 Msa0972100:intron 50.0%
AGGACATCTCGAGAGTTGTC+TGG + chr6_4:4252450-4252469 Msa0972100:intron 50.0%
! TATGGGTCGGGCTAGACTAT+CGG + chr6_4:4252805-4252824 Msa0972100:intron 50.0%
GGGACGATCCACTTGATTCA+TGG - chr6_4:4252875-4252894 None:intergenic 50.0%
GACCTCTCTCGAGATCAGAA+TGG - chr6_4:4253395-4253414 None:intergenic 50.0%
AGGTCCTCCAATACAAACCG+AGG + chr6_4:4253410-4253429 Msa0972100:intron 50.0%
! CAAACCGAGGTTTAGGATGG+TGG + chr6_4:4253423-4253442 Msa0972100:intron 50.0%
TCCTCCACCATCCTAAACCT+CGG - chr6_4:4253430-4253449 None:intergenic 50.0%
CCTGCTGAAAGAAATGGAGC+TGG - chr6_4:4253574-4253593 None:intergenic 50.0%
CCAGCTCCATTTCTTTCAGC+AGG + chr6_4:4253571-4253590 Msa0972100:intron 50.0%
TTCAGCAGGGTTGGATCAAC+TGG + chr6_4:4253585-4253604 Msa0972100:intron 50.0%
CCTGCTGAAAGAAATGGAGC+TGG - chr6_4:4253574-4253593 None:intergenic 50.0%
CCAGCTCCATTTCTTTCAGC+AGG + chr6_4:4253571-4253590 Msa0972100:intron 50.0%
TTCAGCAGGGTTGGATCAAC+TGG + chr6_4:4253585-4253604 Msa0972100:intron 50.0%
! GTTGGATCAACTGGCTCTTC+TGG + chr6_4:4253633-4253652 Msa0972100:intron 50.0%
GGATGGAAGAACACCAGCAT+TGG - chr6_4:4253780-4253799 None:intergenic 50.0%
!! GAGGGTACCTATTAGGTACC+GGG + chr6_4:4254623-4254642 Msa0972100:intron 50.0%
!! CGACACTTGGGTTGACCTAG+TGG + chr6_4:4248268-4248287 Msa0972100:intron 55.0%
! CTCTGGTGCCAATTTGGGTG+GGG + chr6_4:4248345-4248364 Msa0972100:intron 55.0%
! ATGGGTCGGGCTAGACTATC+GGG + chr6_4:4252806-4252825 Msa0972100:intron 55.0%
! ACCGAGGTTTAGGATGGTGG+AGG + chr6_4:4253426-4253445 Msa0972100:intron 55.0%
TGAGTCTCGACCACCACATC+AGG - chr6_4:4253735-4253754 None:intergenic 55.0%
GGTCTTAAACGGGTCCCACA+TGG + chr6_4:4254363-4254382 Msa0972100:intron 55.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr6_4:4248306-4248325 Msa0972100:intron 60.0%
! CTGGCTCTTCTGGGTTCGCA+AGG + chr6_4:4253643-4253662 Msa0972100:intron 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 4247664 4255374 4247664 ID=Msa0972100;Name=Msa0972100
chr6_4 mRNA 4247664 4255374 4247664 ID=Msa0972100-mRNA-1;Parent=Msa0972100;Name=Msa0972100-mRNA-1;_AED=0.20;_eAED=0.26;_QI=0|0|0|0.8|1|1|5|0|341
chr6_4 exon 4247664 4247928 4247664 ID=Msa0972100-mRNA-1:exon:1889;Parent=Msa0972100-mRNA-1
chr6_4 exon 4250330 4250509 4250330 ID=Msa0972100-mRNA-1:exon:1890;Parent=Msa0972100-mRNA-1
chr6_4 exon 4250580 4250655 4250580 ID=Msa0972100-mRNA-1:exon:1891;Parent=Msa0972100-mRNA-1
chr6_4 exon 4253864 4253916 4253864 ID=Msa0972100-mRNA-1:exon:1892;Parent=Msa0972100-mRNA-1
chr6_4 exon 4254923 4255374 4254923 ID=Msa0972100-mRNA-1:exon:1893;Parent=Msa0972100-mRNA-1
chr6_4 CDS 4247664 4247928 4247664 ID=Msa0972100-mRNA-1:cds;Parent=Msa0972100-mRNA-1
chr6_4 CDS 4250330 4250509 4250330 ID=Msa0972100-mRNA-1:cds;Parent=Msa0972100-mRNA-1
chr6_4 CDS 4250580 4250655 4250580 ID=Msa0972100-mRNA-1:cds;Parent=Msa0972100-mRNA-1
chr6_4 CDS 4253864 4253916 4253864 ID=Msa0972100-mRNA-1:cds;Parent=Msa0972100-mRNA-1
chr6_4 CDS 4254923 4255374 4254923 ID=Msa0972100-mRNA-1:cds;Parent=Msa0972100-mRNA-1
Gene Sequence

>Msa0972100

ATGATTGATAGGGGAAGAAGAAGAATTTCCAAAATTGATTTGGAGAATCTTCCATGTTATGATTATGTTGTTGATCATAGAACTAGCACTATTGATTGTGCAATTTGCTTGGAGAATTTCACTATTGGGGATAAATGTAGATTGTTACCTATTTGCAAGCATAGTTTTCATGCTCAATGTGTGGATCAATGGCTTTTGAAGCATCCCATTTGTCCAATTTGTAGATCTATGATTGGTTCTCATAGTGGAGACAAAGTTGTTATAGGAATGGATTTCTTGTTTCTATTTCGTGAGTGTTTTTTCAAAAGAAGCATTTCCAAAACTGATTTGGAGAAGCTTCCATGTTATGATTATGTTGCAAAAGAAAATGGAAGTAACCCTTTGGATTGTGCAATTTGCTTGGAGAATTTCACTATTGGGGATAAGTGTAGATTGTTGCCTATTTATCCAGGGTTTGTTCTCACAGTGCAAACAAAGTTGTTATACGTAACAATGGAAGAGAAATGGAACTATCTAGAAATAGGAGGAGTGGGCCGTGTCTTAGTATTAGCATCGACACCAATAACAAATGCCGGACTAGTGCTTTTGGTCCTATTTCGTATATGTTTTCCTGCTGAGAGTTATATGAGTATGAGATTAGGAAGAGCAACAACAATGGTTGATAGGGGAAGAAGAAGCCTTTCCAAAGTTGATTTAGAGAAGCTTCCATGTTATGATTATGTTGCAAAAGAAAATGGAAGTAACCCTTTAGATTGTGCAATTTGTTTGGAGAATTTCACTATTGGGGATAAATGTAGATTGTTACCTACTTGCAAGCACAATTTTCATGCTCAATGTGTGGATCAATGGCTTTTGAGGAATTCCATTTGTCCAATTTGTAGATCTATGGTTGGTTCTCATAGTGCAAACAAAGTTGTTATAGGTAACAATGGAAGAGAAAGCATAGAAAGTGGTTCATCTAGAAATGTTGTTATAGAATTAAGAGAAAATATTCCAACATTTGAAGTAGAATCACAAGAGCACTAA
Protein sequence

>Msa0972100

MIDRGRRRISKIDLENLPCYDYVVDHRTSTIDCAICLENFTIGDKCRLLPICKHSFHAQCVDQWLLKHPICPICRSMIGSHSGDKVVIGMDFLFLFRECFFKRSISKTDLEKLPCYDYVAKENGSNPLDCAICLENFTIGDKCRLLPIYPGFVLTVQTKLLYVTMEEKWNYLEIGGVGRVLVLASTPITNAGLVLLVLFRICFPAESYMSMRLGRATTMVDRGRRSLSKVDLEKLPCYDYVAKENGSNPLDCAICLENFTIGDKCRLLPTCKHNFHAQCVDQWLLRNSICPICRSMVGSHSANKVVIGNNGRESIESGSSRNVVIELRENIPTFEVESQEH*