AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0942700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942700 MtrunA17_Chr8g0351191 55.000 600 252 6 525 1111 1 595 0.0 669
Msa0942700 MtrunA17_Chr7g0229241 35.815 1061 622 21 79 1110 64 1094 0.0 623
Msa0942700 MtrunA17_Chr3g0144121 33.423 1119 651 23 55 1111 65 1151 0.0 592
Msa0942700 MtrunA17_Chr3g0101191 33.424 1104 638 24 58 1111 70 1126 3.23e-177 559
Msa0942700 MtrunA17_Chr8g0390891 38.385 805 435 16 336 1111 10 782 2.40e-172 536
Msa0942700 MtrunA17_Chr1g0208701 29.525 1199 660 33 1 1111 1 1102 8.72e-132 436
Msa0942700 MtrunA17_Chr1g0208691 29.525 1199 660 33 1 1111 1 1102 1.88e-131 435
Msa0942700 MtrunA17_Chr2g0279231 34.314 714 408 13 446 1113 18 716 4.34e-128 417
Msa0942700 MtrunA17_Chr1g0153361 34.286 770 448 15 386 1110 759 1515 2.47e-122 416
Msa0942700 MtrunA17_Chr5g0395921 28.585 1081 615 30 114 1111 155 1161 1.76e-120 406
Msa0942700 MtrunA17_Chr6g0468801 34.467 647 344 11 487 1112 1 588 1.22e-114 376
Msa0942700 MtrunA17_Chr2g0321931 37.341 549 295 13 587 1116 3 521 5.67e-106 347
Msa0942700 MtrunA17_Chr6g0474211 37.012 589 319 14 558 1111 5 576 6.08e-106 353
Msa0942700 MtrunA17_Chr8g0373071 29.412 714 436 15 9 660 16 723 3.29e-88 302
Msa0942700 MtrunA17_Chr8g0373061 43.590 312 166 4 803 1113 1 303 6.77e-80 266
Msa0942700 MtrunA17_Chr8g0351181 36.465 447 253 8 12 437 10 446 3.22e-79 268
Msa0942700 MtrunA17_Chr7g0219281 44.373 311 161 6 803 1111 1 301 1.29e-76 262
Msa0942700 MtrunA17_Chr2g0302511 37.867 375 215 8 738 1111 61 418 2.82e-74 259
Msa0942700 MtrunA17_Chr3g0122161 40.650 369 203 8 746 1111 938 1293 4.82e-74 271
Msa0942700 MtrunA17_Chr3g0122161 32.958 355 222 10 413 757 527 875 6.83e-43 171
Msa0942700 MtrunA17_Chr1g0213431 40.650 369 203 8 746 1111 927 1282 5.47e-74 271
Msa0942700 MtrunA17_Chr1g0213431 35.315 286 177 6 413 696 516 795 8.11e-43 171
Msa0942700 MtrunA17_Chr2g0320651 40.650 369 203 8 746 1111 938 1293 1.18e-73 270
Msa0942700 MtrunA17_Chr2g0320651 35.315 286 177 6 413 696 527 806 8.54e-43 171
Msa0942700 MtrunA17_Chr4g0056611 42.120 349 188 6 766 1113 434 769 3.95e-73 264
Msa0942700 MtrunA17_Chr4g0056611 38.907 311 185 3 412 722 9 314 4.39e-57 215
Msa0942700 MtrunA17_Chr8g0363051 42.587 317 172 5 798 1113 261 568 1.51e-72 258
Msa0942700 MtrunA17_Chr3g0122931 40.223 358 196 8 762 1113 484 829 4.45e-70 255
Msa0942700 MtrunA17_Chr3g0122931 34.715 386 232 9 341 711 12 392 4.09e-56 212
Msa0942700 MtrunA17_Chr6g0480691 42.903 310 166 6 803 1111 1 300 5.77e-70 243
Msa0942700 MtrunA17_Chr7g0235811 40.240 333 185 7 783 1113 94 414 8.51e-69 243
Msa0942700 MtrunA17_Chr2g0319451 40.379 317 172 7 799 1112 224 526 4.20e-68 242
Msa0942700 MtrunA17_Chr5g0447551 41.290 310 171 5 803 1111 1 300 2.70e-67 243
Msa0942700 MtrunA17_Chr7g0219271 41.017 295 159 5 414 700 16 303 3.40e-67 235
Msa0942700 MtrunA17_Chr7g0271061 38.398 362 209 7 751 1111 958 1306 4.71e-66 246
Msa0942700 MtrunA17_Chr7g0271061 36.713 286 173 7 413 696 543 822 5.10e-45 178
Msa0942700 MtrunA17_Chr3g0117621 38.360 378 215 8 739 1111 942 1306 4.84e-66 246
Msa0942700 MtrunA17_Chr3g0117621 35.556 315 192 8 413 725 543 848 6.00e-45 178
Msa0942700 MtrunA17_Chr3g0085391 39.514 329 186 7 783 1110 2 318 2.59e-65 230
Msa0942700 MtrunA17_Chr1g0179941 39.228 311 184 3 412 722 9 314 2.41e-62 217
Msa0942700 MtrunA17_Chr4g0069101 33.643 431 270 8 273 700 17 434 1.52e-61 221
Msa0942700 MtrunA17_Chr5g0416531 40.496 242 134 5 870 1111 1 232 4.70e-47 171
Msa0942700 MtrunA17_Chr6g0478311 32.857 350 219 10 253 596 10 349 3.48e-44 164
Msa0942700 MtrunA17_Chr1g0162991 34.894 235 143 4 879 1112 2 227 3.44e-43 163
Msa0942700 MtrunA17_Chr7g0270971 24.779 565 354 14 114 616 155 710 4.63e-43 169
Msa0942700 MtrunA17_Chr2g0326511 38.916 203 113 5 910 1111 1 193 4.93e-37 144
Msa0942700 MtrunA17_Chr3g0107231 47.143 140 74 0 557 696 113 252 1.16e-36 142
Msa0942700 MtrunA17_Chr8g0337151 36.139 202 119 3 910 1111 1 192 2.08e-34 136
Msa0942700 MtrunA17_Chr1g0213471 36.449 214 127 5 899 1112 3 207 2.14e-34 137
Msa0942700 MtrunA17_Chr1g0182461 33.778 225 139 5 298 515 2 223 5.36e-31 122
Msa0942700 MtrunA17_Chr2g0279301 27.989 368 188 11 315 671 19 320 6.51e-31 124
Msa0942700 MtrunA17_Chr8g0391561 25.935 401 269 9 9 387 40 434 4.52e-29 122
Msa0942700 MtrunA17_Chr5g0417461 32.579 221 143 5 525 742 1 218 3.63e-27 115
Msa0942700 MtrunA17_Chr8g0363041 24.835 455 305 15 74 512 49 482 7.96e-27 115
Msa0942700 MtrunA17_Chr7g0269201 35.220 159 102 1 558 715 5 163 1.06e-24 107
Msa0942700 MtrunA17_Chr2g0313121 48.980 98 46 2 784 880 222 316 2.79e-21 96.7
Msa0942700 MtrunA17_Chr3g0087561 37.838 148 85 4 237 381 36 179 3.87e-21 92.4
Msa0942700 MtrunA17_Chr6g0476561 56.579 76 32 1 803 877 1 76 5.06e-21 88.6
Msa0942700 MtrunA17_Chr1g0201931 40.196 102 60 1 924 1024 1 102 3.68e-18 81.3
Msa0942700 MtrunA17_Chr8g0342611 27.230 213 147 6 10 217 7 216 5.76e-16 78.6
Msa0942700 MtrunA17_Chr8g0334511 35.514 107 66 2 409 515 395 498 4.82e-15 79.7
Msa0942700 MtrunA17_Chr2g0302321 39.535 86 52 0 851 936 5 90 1.31e-14 70.5
Msa0942700 MtrunA17_Chr4g0029381 27.136 199 125 4 87 284 5 184 1.75e-14 73.6
Msa0942700 MtrunA17_Chr6g0478321 32.075 159 96 6 955 1111 1 149 2.95e-14 74.3
Msa0942700 MtrunA17_Chr8g0335541 43.902 82 45 1 516 596 6 87 9.62e-14 71.6
Msa0942700 MtrunA17_Chr7g0259561 81.395 43 8 0 1162 1204 288 330 1.00e-13 75.5
Msa0942700 MtrunA17_Chr1g0196701 75.000 40 10 0 504 543 19 58 1.40e-11 60.8
Msa0942700 MtrunA17_Chr7g0234351 23.786 206 137 4 79 274 64 259 5.51e-11 64.7
Msa0942700 MtrunA17_Chr2g0333901 29.286 140 92 3 236 370 87 224 5.80e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942700 AT4G23160.3 39.233 339 189 6 783 1116 85 411 4.03e-66 244
Msa0942700 AT4G23160.2 39.233 339 189 6 783 1116 85 411 4.03e-66 244
Msa0942700 AT3G29785.1 57.778 90 37 1 11 100 7 95 8.04e-29 112
Msa0942700 ATMG00300.1 40.351 114 63 2 376 485 30 142 8.65e-20 87.8
Msa0942700 ATMG00710.1 47.674 86 42 2 578 663 1 83 8.69e-20 86.7
Msa0942700 ATMG00810.1 39.286 140 67 5 974 1109 1 126 2.92e-18 86.3
Msa0942700 ATMG00820.1 44.706 85 46 1 799 882 40 124 7.36e-17 80.1

Find 284 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATACCAACTGAACTTAAT+TGG 0.095422 6_3:-17998424 None:intergenic
AATTCTTGAACAATTCTTTC+TGG 0.139133 6_3:-17998934 None:intergenic
ACTACGATGATTTCTGAATT+TGG 0.164840 6_3:-17998702 None:intergenic
GTAGCAAAACTTCTTGAATT+TGG 0.172429 6_3:-17999680 None:intergenic
AGCTCAAGTTTCTCCTTCTT+TGG 0.178545 6_3:-17999433 None:intergenic
GCTCAAGTTTCTCCTTCTTT+GGG 0.216862 6_3:-17999432 None:intergenic
AGCTTGTTCACTCCGATGTT+TGG 0.237783 6_3:+17999452 Msa0942700:CDS
ATCTCATCTGTGGGACTTCC+TGG 0.243179 6_3:-18000210 None:intergenic
ACCGATGAAAGTGCACTTCT+TGG 0.244260 6_3:-18000019 None:intergenic
TCATCATCCTTCATCGATTC+TGG 0.247368 6_3:-17998164 None:intergenic
CTAGAAGACCTTCTTAATTC+AGG 0.247761 6_3:-18000306 None:intergenic
TTCGCCTCTTGATTCTTTGC+TGG 0.253882 6_3:-17998797 None:intergenic
ACTGCCTTGGAGCTTGTTTC+AGG 0.257910 6_3:-18000839 None:intergenic
CAGGCTTACCAAAGAACTTC+TGG 0.259364 6_3:+17999815 Msa0942700:CDS
AGTTTGTTTGACATGGATTT+TGG 0.262972 6_3:-18004445 None:intergenic
GAAAGTGCACTTCTTGGATT+TGG 0.263652 6_3:-18000013 None:intergenic
GAATTTGACATGAAGGATTT+AGG 0.265170 6_3:+18001044 Msa0942700:CDS
GCTTGTTCACTCCGATGTTT+GGG 0.268590 6_3:+17999453 Msa0942700:CDS
CCAGAAGGATTCTCAGAAAA+AGG 0.270335 6_3:+18000774 Msa0942700:CDS
GGTCCGGCAAAGAAAATTCT+TGG 0.270933 6_3:+18001065 Msa0942700:CDS
TTTCCACTCCATACCTCTTC+TGG 0.272397 6_3:-17999907 None:intergenic
TATGCTTTCGTGATGTTTCA+TGG 0.282426 6_3:+18004114 Msa0942700:CDS
AGACTTCATTTCGTCTTTCA+TGG 0.287589 6_3:-18000442 None:intergenic
ATTATCACAGTCAAAGCTTT+TGG 0.290907 6_3:+18004399 Msa0942700:intron
CTCACAAAATCACCATGTTT+TGG 0.294126 6_3:+18004486 Msa0942700:CDS
TGACTGCACACGCAAGCTTC+TGG 0.300525 6_3:-17999794 None:intergenic
AATGGTCGGCATTGCACTTC+TGG 0.300679 6_3:-18000902 None:intergenic
GCTTCTGCCCAGAAGTTCTT+TGG 0.310782 6_3:-17999823 None:intergenic
ATGAGTTTGGCTACCGCCTC+TGG 0.321193 6_3:+18000052 Msa0942700:CDS
TTCTGCCAATTCCTCTGATT+GGG 0.327914 6_3:-18000235 None:intergenic
TGACGCGTTGATATGTTCTT+TGG 0.328692 6_3:+17998856 Msa0942700:CDS
TCCATCTCGGGCGCCGTTAC+CGG 0.329615 6_3:-18004533 None:intergenic
ATTCCATATGCTTCGGCAAT+TGG 0.335152 6_3:+18001275 Msa0942700:CDS
ATTCTGCCAATTCCTCTGAT+TGG 0.336830 6_3:-18000236 None:intergenic
AGAAGGCACTTCACAACAAA+TGG 0.365196 6_3:+18000511 Msa0942700:CDS
CTCAGCTACACCATTGTGTT+GGG 0.369125 6_3:-17999743 None:intergenic
GTGAAGACTGCATTTCTTCA+TGG 0.371375 6_3:+18000720 Msa0942700:CDS
ATATATGAATGAAAAGAAAA+TGG 0.371747 6_3:-18004094 None:intergenic
CTTCCAATTGCCGAAGCATA+TGG 0.372302 6_3:-18001278 None:intergenic
AGTCAATTCCTTCTTTCTGC+TGG 0.374496 6_3:-18000602 None:intergenic
TCGCCTCTTGATTCTTTGCT+GGG 0.374564 6_3:-17998796 None:intergenic
ATGGTGCGGACTTTGGCTTT+TGG 0.377376 6_3:+17998078 Msa0942700:CDS
AAGTGCACTTTCATCGGTTA+TGG 0.378151 6_3:+18000024 Msa0942700:CDS
GATACCAACTGAACTTAATT+GGG 0.381678 6_3:-17998423 None:intergenic
ATTTCTGAATTTGGATCGTC+TGG 0.383135 6_3:-17998693 None:intergenic
TTCATATTCACCACCATTGT+CGG 0.384253 6_3:-17999653 None:intergenic
CAAATGAAAATCCCAATCTA+TGG 0.385165 6_3:+17999257 Msa0942700:CDS
TAATCTCTTGTGCCATAGAT+TGG 0.391137 6_3:-17999269 None:intergenic
CATGCTTCATCATAATCTTC+AGG 0.392057 6_3:-18000387 None:intergenic
ATTGGCCCTTACTTGTTCAA+TGG 0.393110 6_3:-18004228 None:intergenic
GTAGAGATGGATGATGTTCC+AGG 0.394130 6_3:+18000192 Msa0942700:CDS
AATCCATGTCAAACAAACTT+TGG 0.395936 6_3:+18004449 Msa0942700:CDS
CAACGGTGTGCTAACCGGTT+TGG 0.400695 6_3:-18001183 None:intergenic
ATTCTTGAACAATTCTTTCT+GGG 0.401861 6_3:-17998933 None:intergenic
GATTCCCCAATCAGAGGAAT+TGG 0.403290 6_3:+18000230 Msa0942700:CDS
TGTCTTCCCTACCAGATAGT+TGG 0.404400 6_3:+17998480 Msa0942700:CDS
AAAGTGCACTTCTTGGATTT+GGG 0.406883 6_3:-18000012 None:intergenic
ACAGTAGCGCTCCAACTATC+TGG 0.408688 6_3:-17998491 None:intergenic
ATCACGAGAGATAAGCAAAA+AGG 0.408718 6_3:+18001095 Msa0942700:CDS
TCATCCATCTCTACATAAAC+AGG 0.414467 6_3:-18000183 None:intergenic
GTCAAAAGAATTTGACATGA+AGG 0.415846 6_3:+18001037 Msa0942700:CDS
GTCATGCTTTCAAACTTGGC+AGG 0.416378 6_3:-18001576 None:intergenic
AGAAATTCAACCAGAGGAAA+TGG 0.417568 6_3:+17998653 Msa0942700:CDS
TTGGCCCTTACTTGTTCAAT+GGG 0.418351 6_3:-18004227 None:intergenic
CTTGCCAACGGTGTGCTAAC+CGG 0.418618 6_3:-18001188 None:intergenic
CTGGCACAGTTCTTTCCATT+CGG 0.419893 6_3:-17999714 None:intergenic
CTTAATTCAGGAACTGAAGT+AGG 0.424590 6_3:-18000294 None:intergenic
ATGTCAAACAAACTTTGGTT+TGG 0.425810 6_3:+18004454 Msa0942700:CDS
CCCACTGCATGGCCAATGTC+TGG 0.427278 6_3:-18001329 None:intergenic
TTAAGTTGAATGGGTCTGTA+TGG 0.429127 6_3:+17999035 Msa0942700:CDS
ATGCAGTGGGAGTTGTTAGC+AGG 0.430599 6_3:+18001342 Msa0942700:CDS
AGAAGCTTGCGTGTGCAGTC+AGG 0.432133 6_3:+17999796 Msa0942700:CDS
TTCTCTTCTAAATTCCATCT+CGG 0.433350 6_3:-18004546 None:intergenic
ATTTGATGATGTTCGTGATC+TGG 0.433721 6_3:+17998553 Msa0942700:CDS
AATCTCTTGTGCCATAGATT+GGG 0.435066 6_3:-17999268 None:intergenic
TGTAGCCTTCGTCAGCCAAC+TGG 0.439978 6_3:-17999114 None:intergenic
CCGAGGTCCATCGGTGCCAT+TGG 0.441610 6_3:+17999873 Msa0942700:CDS
GAGATCCGACGGAGAGAGTT+GGG 0.442215 6_3:+17998587 Msa0942700:CDS
GGTTATGGTGAAGATGAGTT+TGG 0.444744 6_3:+18000039 Msa0942700:CDS
CTCGCTCAATCCTGAGTCAT+TGG 0.444778 6_3:-18000160 None:intergenic
GCAAATGTTGCTTCCACCTC+AGG 0.445655 6_3:+17998827 Msa0942700:CDS
GAAGTTAAGATTAAGTTGAA+TGG 0.447006 6_3:+17999025 Msa0942700:CDS
GGAGAGCAAGGAAGAGTCTT+GGG 0.448480 6_3:+17998877 Msa0942700:CDS
CAGTCTTCCACGGTGATGAT+TGG 0.449152 6_3:+17999140 Msa0942700:CDS
CCATTGTGTTGGGGAGTACC+TGG 0.449435 6_3:-17999733 None:intergenic
AAGTTCGATGGTGCGGACTT+TGG 0.452497 6_3:+17998071 Msa0942700:CDS
GAATCCTTTGACCACTAGTC+GGG 0.453142 6_3:-18000580 None:intergenic
ATGATCACTCTAGGAAGGTA+TGG 0.453919 6_3:+17999530 Msa0942700:CDS
CCAATGGATGGGACTGTTGT+TGG 0.453939 6_3:-17999478 None:intergenic
GAACAATTCTTTCTGGGAAG+TGG 0.458349 6_3:-17998927 None:intergenic
TTATAGACAAACTGAAGTTA+TGG 0.459647 6_3:+18001366 Msa0942700:CDS
TGGTGAAGCTCAATACTATC+AGG 0.460103 6_3:+18000646 Msa0942700:CDS
AATCTATGGCACAAGAGATT+AGG 0.467649 6_3:+17999271 Msa0942700:CDS
TCTCTTCTAAATTCCATCTC+GGG 0.469998 6_3:-18004545 None:intergenic
GGCTAAGATTCCATATGCTT+CGG 0.470269 6_3:+18001268 Msa0942700:CDS
TTAGGCCATATGAGTGAAAA+GGG 0.472747 6_3:+17999289 Msa0942700:CDS
TGAACAATCATGTAAGGTTG+TGG 0.472879 6_3:+17998994 Msa0942700:CDS
GTTGATGATATGTTAGTAGC+AGG 0.473495 6_3:+18000975 Msa0942700:CDS
CTTCAGTTCCTGAATTAAGA+AGG 0.474470 6_3:+18000298 Msa0942700:CDS
TGAACTTTATTTGATGCTGA+AGG 0.474628 6_3:-17998317 None:intergenic
GTTTCATGGACTGTCGCAAC+CGG 0.476163 6_3:+18004128 Msa0942700:CDS
AAGTTAAGATTAAGTTGAAT+GGG 0.477594 6_3:+17999026 Msa0942700:CDS
AGAGGTATGGAGTGGAAAAG+AGG 0.477812 6_3:+17999912 Msa0942700:CDS
TTTCTGAGAATCCTTCTGGT+TGG 0.477873 6_3:-18000770 None:intergenic
TAAACTTTACCAAGGTTACC+AGG 0.478940 6_3:-17998962 None:intergenic
CTCAAGTTTCTCCTTCTTTG+GGG 0.479045 6_3:-17999431 None:intergenic
GTGAAGTGCCTTCTTTCCCA+TGG 0.480556 6_3:-18000502 None:intergenic
CAACATGGGCGATGCCAAAC+CGG 0.483624 6_3:+18001169 Msa0942700:CDS
TGACATGAAGGATTTAGGTC+CGG 0.485700 6_3:+18001049 Msa0942700:CDS
AAGGAAAACTACCAAGTCTT+CGG 0.487272 6_3:+17999332 Msa0942700:CDS
TTTACCACGTCCATTTCCTC+TGG 0.487326 6_3:-17998663 None:intergenic
AACCTTGGTAAAGTTTACCT+TGG 0.487612 6_3:+17998968 Msa0942700:CDS
TGGAAATGAACAATCATGTA+AGG 0.490322 6_3:+17998988 Msa0942700:CDS
AACTTCATATACCACTGCCT+TGG 0.490906 6_3:-18000852 None:intergenic
TTGTTGCAACTGCAATCAAA+TGG 0.491822 6_3:-17999237 None:intergenic
ATTAGGCCATATGAGTGAAA+AGG 0.493480 6_3:+17999288 Msa0942700:CDS
TACATGATTGTTCATTTCCA+AGG 0.496095 6_3:-17998985 None:intergenic
TCCAAGAAGTGCACTTTCAT+CGG 0.496599 6_3:+18000018 Msa0942700:CDS
GAACAATCATGTAAGGTTGT+GGG 0.499830 6_3:+17998995 Msa0942700:CDS
GCCGGTAACGGCGCCCGAGA+TGG 0.500471 6_3:+18004532 Msa0942700:CDS
ATGAAGGTTATGCACTCAAA+AGG 0.501665 6_3:+17999313 Msa0942700:CDS
TGGAGAGCAAGGAAGAGTCT+TGG 0.501744 6_3:+17998876 Msa0942700:CDS
GAAAAGAGAATATGGTGTGC+AGG 0.502412 6_3:+18000796 Msa0942700:CDS
TGTATCTCTTAGAGCCATCA+TGG 0.502829 6_3:-18000554 None:intergenic
AGGTTAAAGAAAAGCTTGTA+TGG 0.503664 6_3:+18000816 Msa0942700:CDS
ATATGTGAAGACTGTATACT+TGG 0.507653 6_3:+17999370 Msa0942700:CDS
AAAGAGTGATGTACAAAGAC+AGG 0.510980 6_3:+18000124 Msa0942700:CDS
TCTATCGAGTGTTGGAATTG+TGG 0.512167 6_3:+17998740 Msa0942700:CDS
TGTTACACAAACTCTTGTGT+AGG 0.513613 6_3:+18001542 Msa0942700:CDS
GATGATTGGAAGATTTCAAA+AGG 0.514140 6_3:+17999154 Msa0942700:CDS
CGCGTCACCTCCTCCTGAGG+TGG 0.515832 6_3:-17998840 None:intergenic
GAGTCTTGGGTGTTAGACTC+TGG 0.518950 6_3:+17998890 Msa0942700:CDS
AATTATGTCCCTGGTAACCT+TGG 0.520579 6_3:+17998953 Msa0942700:CDS
GTTACACAAACTCTTGTGTA+GGG 0.524351 6_3:+18001543 Msa0942700:CDS
AGAGTCAGCTTTCAGACAAG+TGG 0.526062 6_3:+17999403 Msa0942700:CDS
TAAGTTACCCATGGGAAAGA+AGG 0.527006 6_3:+18000494 Msa0942700:CDS
TGAAGTGCCTTCTTTCCCAT+GGG 0.527217 6_3:-18000501 None:intergenic
CACAGCTGTGAGTAGCTCCT+CGG 0.527844 6_3:+17998514 Msa0942700:CDS
TATGTGCACATTAGTGATCA+AGG 0.528014 6_3:+17999973 Msa0942700:CDS
ACAAAATACCAGAAGAGGTA+TGG 0.529190 6_3:+17999899 Msa0942700:CDS
TTGTGCTCCAATGGCACCGA+TGG 0.530306 6_3:-17999880 None:intergenic
ATTTCTATTGACCGAAGACT+TGG 0.531290 6_3:-17999343 None:intergenic
TATGAGTGAAAAGGGGATGA+AGG 0.531430 6_3:+17999297 Msa0942700:CDS
AAACCAAAGTTTGTTTGACA+TGG 0.531650 6_3:-18004452 None:intergenic
TTCGTCAGCCAACTGGCCTA+CGG 0.532309 6_3:-17999107 None:intergenic
ACAGCTGTGAGTAGCTCCTC+GGG 0.532462 6_3:+17998515 Msa0942700:CDS
CTTAATCTCCGTAGGCCAGT+TGG 0.533019 6_3:+17999099 Msa0942700:CDS
GACTACATGTTGTTAACTGA+TGG 0.536892 6_3:+18000357 Msa0942700:CDS
TAGCGCTCCAACTATCTGGT+AGG 0.539026 6_3:-17998487 None:intergenic
AAAGAAACCAGAATCGATGA+AGG 0.539324 6_3:+17998157 Msa0942700:CDS
CTTTGATCTCAAATCAGACA+TGG 0.539916 6_3:+18000463 Msa0942700:CDS
TGTTGGAATTGTGGAAAGAC+GGG 0.540082 6_3:+17998749 Msa0942700:CDS
TAATGCTTCCCACCAATGGA+TGG 0.540404 6_3:-17999490 None:intergenic
AAGTGGAAGAACCCCAAAGA+AGG 0.540500 6_3:+17999420 Msa0942700:CDS
GATTGGGGAATCTCATCTGT+GGG 0.541163 6_3:-18000219 None:intergenic
AAAGGATTCCAGCAGAAAGA+AGG 0.542053 6_3:+18000594 Msa0942700:CDS
ATAGTATTGAGCTTCACCAC+TGG 0.543144 6_3:-18000642 None:intergenic
TGATTGGGGAATCTCATCTG+TGG 0.543207 6_3:-18000220 None:intergenic
GGAATCCTTTGACCACTAGT+CGG 0.544373 6_3:-18000581 None:intergenic
TCATGTAAGGTTGTGGGCAA+AGG 0.547375 6_3:+17999001 Msa0942700:CDS
GCTCAGCTACACCATTGTGT+TGG 0.547415 6_3:-17999744 None:intergenic
CGAATGGAAAGAACTGTGCC+AGG 0.547876 6_3:+17999715 Msa0942700:CDS
GAAAACTTCATGCACAAGGA+AGG 0.548472 6_3:+18000876 Msa0942700:CDS
TGAGTTTGGCTACCGCCTCT+GGG 0.548576 6_3:+18000053 Msa0942700:CDS
CAATGGGTAAACGATCAAAC+CGG 0.548939 6_3:-18004211 None:intergenic
AGAGATCCGACGGAGAGAGT+TGG 0.549236 6_3:+17998586 Msa0942700:CDS
GGTACTCTTTACAAGACAGC+TGG 0.550162 6_3:+17999208 Msa0942700:CDS
CAAATAAAGTTCATTTGATG+AGG 0.550433 6_3:+17998327 Msa0942700:CDS
AGGCTTACCAAAGAACTTCT+GGG 0.551019 6_3:+17999816 Msa0942700:CDS
GGAACTGAAGTAGGATGCAC+TGG 0.552002 6_3:-18000285 None:intergenic
CTTAATCAACCGAGGTCCAT+CGG 0.552852 6_3:+17999864 Msa0942700:CDS
GAAGGCACTTCACAACAAAT+GGG 0.553411 6_3:+18000512 Msa0942700:CDS
GCCAGACATTGGCCATGCAG+TGG 0.553894 6_3:+18001328 Msa0942700:CDS
GAGGTGATTGTTCTTGAGAT+AGG 0.554548 6_3:-18001220 None:intergenic
CCAGACATTGGCCATGCAGT+GGG 0.555550 6_3:+18001329 Msa0942700:CDS
CAAATGGGTGTATCGAGTAA+AGG 0.557507 6_3:+18000527 Msa0942700:CDS
AACCACCGCTGGTCTTATGA+AGG 0.557775 6_3:+17998271 Msa0942700:CDS
TAAGTTGAATGGGTCTGTAT+GGG 0.558149 6_3:+17999036 Msa0942700:CDS
AGACCACGGATGCTAGTAAG+TGG 0.560048 6_3:+18000412 Msa0942700:CDS
GCTCAATCCTGAGTCATTGG+TGG 0.560298 6_3:-18000157 None:intergenic
TGGACCTCGGTTGATTAAGT+AGG 0.560811 6_3:-17999860 None:intergenic
ACTCGAAATCTATCGAGTGT+TGG 0.561027 6_3:+17998732 Msa0942700:CDS
TTAGCCATCCCACGTGCATG+TGG 0.561887 6_3:-18001500 None:intergenic
AACACAACCACCAATGACTC+AGG 0.563563 6_3:+18000150 Msa0942700:CDS
GTGAAAATTGAAAAGTTCGA+TGG 0.563926 6_3:+17998059 Msa0942700:CDS
TGAAACAAGCTCCAAGGCAG+TGG 0.564334 6_3:+18000841 Msa0942700:CDS
TCTTCATGGAGACTTAAATG+AGG 0.565936 6_3:+18000734 Msa0942700:CDS
GTGTTGGAATTGTGGAAAGA+CGG 0.567490 6_3:+17998748 Msa0942700:CDS
CTCTGTATGCAATACTGAAG+AGG 0.567853 6_3:-17998621 None:intergenic
ACAACCCAATTAAGTTCAGT+TGG 0.568124 6_3:+17998419 Msa0942700:CDS
GTTGCTTCCACCTCAGGAGG+AGG 0.568689 6_3:+17998833 Msa0942700:CDS
GGACCCACATGCACGTGGGA+TGG 0.569017 6_3:+18001496 Msa0942700:intron
TGTTGAATCTTTGCAAAACA+CGG 0.570070 6_3:-18001151 None:intergenic
TCTGCCAATTCCTCTGATTG+GGG 0.571085 6_3:-18000234 None:intergenic
CTACGAGCACGGGATCCGAA+TGG 0.573880 6_3:+17999699 Msa0942700:CDS
TATCGATGATCACTCTAGGA+AGG 0.574838 6_3:+17999525 Msa0942700:CDS
TTTACACTTCGGATGACAGA+AGG 0.576141 6_3:+17998356 Msa0942700:CDS
GTCTGTACGAGGCCAGACAT+TGG 0.576943 6_3:+18001317 Msa0942700:CDS
ACAACAGTCCCATCCATTGG+TGG 0.578155 6_3:+17999481 Msa0942700:CDS
TGCTAACAACTCCCACTGCA+TGG 0.579223 6_3:-18001340 None:intergenic
AATGCTTCCCACCAATGGAT+GGG 0.584501 6_3:-17999489 None:intergenic
CTTGAAGAAGCAACAATGGT+CGG 0.584556 6_3:-18000916 None:intergenic
TTGTTCAAGAATTATGTCCC+TGG 0.586171 6_3:+17998944 Msa0942700:CDS
CCAACAACAGTCCCATCCAT+TGG 0.586305 6_3:+17999478 Msa0942700:CDS
CTCCCACTTACTAGCATCCG+TGG 0.588137 6_3:-18000415 None:intergenic
TGATCACTCTAGGAAGGTAT+GGG 0.588340 6_3:+17999531 Msa0942700:CDS
GAAGTAATGCTTCCCACCAA+TGG 0.592574 6_3:-17999494 None:intergenic
GATGACAGAAGGCGCATCAG+TGG 0.593273 6_3:+17998367 Msa0942700:CDS
AGCGCTCCAACTATCTGGTA+GGG 0.594325 6_3:-17998486 None:intergenic
GGAGCACAAAATACCAGAAG+AGG 0.595318 6_3:+17999894 Msa0942700:CDS
AAATGGACGTGGTAAATCAA+AGG 0.596335 6_3:+17998670 Msa0942700:CDS
TTCTCAGTGAAGAGATCCGA+CGG 0.596721 6_3:+17998576 Msa0942700:CDS
TGAGGCGGTTGTTTACACTT+CGG 0.598027 6_3:+17998345 Msa0942700:CDS
GATATGTTCTTTGGAGAGCA+AGG 0.598084 6_3:+17998865 Msa0942700:CDS
ATAAAGTTCATTTGATGAGG+CGG 0.598437 6_3:+17998330 Msa0942700:CDS
CCAATGGCACCGATGGACCT+CGG 0.600319 6_3:-17999873 None:intergenic
CGAGTAAAGGAGGACCATGA+TGG 0.601814 6_3:+18000540 Msa0942700:CDS
CTTCTCGATAGACAAGCACT+TGG 0.601850 6_3:+17998194 Msa0942700:CDS
CGAGCCTGTTTATGTAGAGA+TGG 0.602356 6_3:+18000179 Msa0942700:CDS
AATGTTGCTTCCACCTCAGG+AGG 0.603928 6_3:+17998830 Msa0942700:CDS
GGAACTAGCTAAGTTACCCA+TGG 0.604123 6_3:+18000485 Msa0942700:CDS
TTGTCACCAGCTCCAAAACA+TGG 0.604827 6_3:-18004498 None:intergenic
TCAAGAACAATCACCTCAGA+CGG 0.606251 6_3:+18001226 Msa0942700:CDS
AATCGATGAAGGATGATGAG+TGG 0.606445 6_3:+17998168 Msa0942700:CDS
ATCTCTTGAAGAAGCAACAA+TGG 0.607495 6_3:-18000920 None:intergenic
AATTGAAAAGTTCGATGGTG+CGG 0.608192 6_3:+17998064 Msa0942700:CDS
GGCTACACAACAGTCTTCCA+CGG 0.609498 6_3:+17999130 Msa0942700:CDS
GCATTAGAGAACACCTCATG+AGG 0.611715 6_3:-18004164 None:intergenic
CAAGTGCTTGTCTATCGAGA+AGG 0.612004 6_3:-17998193 None:intergenic
ACGACTCTAGATGCCGGTAA+CGG 0.614061 6_3:+18004520 Msa0942700:CDS
TGGAAGTTTGATGTACGCGA+TGG 0.614274 6_3:+18001295 Msa0942700:CDS
TATGGCTGCAGACGAAGGAA+AGG 0.614378 6_3:+17998037 None:intergenic
TTCCAAGGTAAACTTTACCA+AGG 0.615217 6_3:-17998970 None:intergenic
CAACAGTCCCATCCATTGGT+GGG 0.616755 6_3:+17999482 Msa0942700:CDS
GGAGTTATGGCTGCAGACGA+AGG 0.617375 6_3:+17998032 None:intergenic
AGCCTTCATAAGACCAGCGG+TGG 0.620835 6_3:-17998273 None:intergenic
GAATCAAGAGGCGAAAGATG+AGG 0.623736 6_3:+17998805 Msa0942700:CDS
GTTTGAAAACTTCATGCACA+AGG 0.624344 6_3:+18000872 Msa0942700:CDS
GCAAAAGAGAAAACCACCGC+TGG 0.626545 6_3:+17998260 Msa0942700:CDS
AGGAAAACTCTCTCCTCATG+AGG 0.626667 6_3:+18004151 Msa0942700:CDS
AGATGAGATTCCCCAATCAG+AGG 0.627217 6_3:+18000224 Msa0942700:CDS
CTTGTTCACTCCGATGTTTG+GGG 0.629588 6_3:+17999454 Msa0942700:CDS
AAAGCCCGACTAGTGGTCAA+AGG 0.629799 6_3:+18000576 Msa0942700:CDS
GTGACAACGACTCTAGATGC+CGG 0.629972 6_3:+18004514 Msa0942700:CDS
GAGATACAAAGCCCGACTAG+TGG 0.630278 6_3:+18000569 Msa0942700:CDS
CAACGCGTCACCTCCTCCTG+AGG 0.630580 6_3:-17998843 None:intergenic
TAGCCATCCCACGTGCATGT+GGG 0.632613 6_3:-18001499 None:intergenic
TACATGTTGTTAACTGATGG+AGG 0.633818 6_3:+18000360 Msa0942700:CDS
ATACCAGAAGAGGTATGGAG+TGG 0.634245 6_3:+17999904 Msa0942700:CDS
CAAGAGATGGAAAGCCATGG+TGG 0.636177 6_3:+17999594 Msa0942700:CDS
TTTCATCTTTATGCTTCCCG+AGG 0.636932 6_3:-17998531 None:intergenic
TGGTATCGAATTTGACGATG+AGG 0.639552 6_3:+17998439 Msa0942700:CDS
AGAACAATCACCTCAGACGG+AGG 0.639853 6_3:+18001229 Msa0942700:CDS
ATTCACCCAACTCTCTCCGT+CGG 0.641975 6_3:-17998592 None:intergenic
GTGCAGGACCCACATGCACG+TGG 0.642672 6_3:+18001491 Msa0942700:intron
AGAGGAAGAAATTCAACCAG+AGG 0.643795 6_3:+17998647 Msa0942700:CDS
TTTCAAGAGATGGAAAGCCA+TGG 0.645793 6_3:+17999591 Msa0942700:CDS
ATATACATGCACCAACCAGA+AGG 0.648223 6_3:+18000759 Msa0942700:CDS
AAACTTTACCAAGGTTACCA+GGG 0.648516 6_3:-17998961 None:intergenic
ATAGCTCGCGGTAGAAAGAG+TGG 0.649534 6_3:+17999187 Msa0942700:CDS
TGTTGTTGGACCCCAAACAT+CGG 0.650158 6_3:-17999464 None:intergenic
GTAGGCCAGTTGGCTGACGA+AGG 0.651906 6_3:+17999109 Msa0942700:CDS
GAACTAGCTAAGTTACCCAT+GGG 0.655245 6_3:+18000486 Msa0942700:CDS
ATGGCCTGAAACAAGCTCCA+AGG 0.657891 6_3:+18000835 Msa0942700:CDS
GACCACGGATGCTAGTAAGT+GGG 0.658392 6_3:+18000413 Msa0942700:CDS
AAGCTCAGAACCGACAATGG+TGG 0.663133 6_3:+17999643 Msa0942700:CDS
TCAGCTACACCATTGTGTTG+GGG 0.664208 6_3:-17999742 None:intergenic
TCAACCAGAGGAAATGGACG+TGG 0.665050 6_3:+17998659 Msa0942700:CDS
CCAGGTACTCCCCAACACAA+TGG 0.669398 6_3:+17999733 Msa0942700:CDS
TTTGATCTCAAATCAGACAT+GGG 0.670384 6_3:+18000464 Msa0942700:CDS
GCTCCCAGCAAAGAATCAAG+AGG 0.671318 6_3:+17998793 Msa0942700:CDS
GGATGCACTGGTGTGTCAGA+CGG 0.673844 6_3:-18000273 None:intergenic
ATGGGTGTATCGAGTAAAGG+AGG 0.675575 6_3:+18000530 Msa0942700:CDS
CAAACCGGTTAGCACACCGT+TGG 0.676384 6_3:+18001184 Msa0942700:CDS
AAATCTTCCAATCATCACCG+TGG 0.678539 6_3:-17999147 None:intergenic
GTATTGCATACAGAGTCAAG+AGG 0.682691 6_3:+17998629 Msa0942700:CDS
AGGCGAAAATGACTTGCCAA+CGG 0.685111 6_3:-18001200 None:intergenic
TAGGCCATATGAGTGAAAAG+GGG 0.691407 6_3:+17999290 Msa0942700:CDS
TGATGAAGCATGTCAGACCA+CGG 0.691661 6_3:+18000398 Msa0942700:CDS
AAGAGCCTTCATAAGACCAG+CGG 0.707222 6_3:-17998276 None:intergenic
TGTACGCGATGGTCTGTACG+AGG 0.718825 6_3:+18001306 Msa0942700:CDS
TCAGCCTACTTAATCAACCG+AGG 0.733649 6_3:+17999856 Msa0942700:CDS
TGCAGGACCCACATGCACGT+GGG 0.736763 6_3:+18001492 Msa0942700:intron
GGTGCAATGACGATAGCTCG+CGG 0.741901 6_3:+17999175 Msa0942700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAGTATTATTTTTGTTT+GGG - chr6_3:18002318-18002337 None:intergenic 10.0%
!!! ATATTAGTATTATTTTTGTT+TGG - chr6_3:18002319-18002338 None:intergenic 10.0%
!!! TGTAATATTTTTTTTCTTAA+GGG - chr6_3:18003206-18003225 None:intergenic 10.0%
!!! TTGTAATATTTTTTTTCTTA+AGG - chr6_3:18003207-18003226 None:intergenic 10.0%
!!! CTATTTTTATATGTATTTTG+TGG - chr6_3:18002387-18002406 None:intergenic 15.0%
!!! ATATTAAAAGCATAGAATAA+TGG + chr6_3:18002697-18002716 Msa0942700:intron 15.0%
!!! GTAATATTTTTTTTCTTAAG+GGG - chr6_3:18003205-18003224 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG + chr6_3:18003390-18003409 Msa0942700:intron 15.0%
!! ATATATGAATGAAAAGAAAA+TGG - chr6_3:18004097-18004116 None:intergenic 15.0%
!!! AAGTTAAGATTAAGTTGAAT+GGG + chr6_3:17999026-17999045 Msa0942700:CDS 20.0%
!!! AGAATTTTAGAGAAAATTCT+TGG + chr6_3:18001799-18001818 Msa0942700:intron 20.0%
!!! GAATTTTAGAGAAAATTCTT+GGG + chr6_3:18001800-18001819 Msa0942700:intron 20.0%
!!! GACTTTTGTAAAATCAATAT+AGG + chr6_3:18002244-18002263 Msa0942700:intron 20.0%
!! TGCTTCTATAAATAACAAAA+AGG - chr6_3:18002493-18002512 None:intergenic 20.0%
!!! TTTTTGTTATTTATAGAAGC+AGG + chr6_3:18002492-18002511 Msa0942700:intron 20.0%
!!! TTTTATTTTCTTTTGACCTT+GGG - chr6_3:18003269-18003288 None:intergenic 20.0%
!!! TTTTTATTTTCTTTTGACCT+TGG - chr6_3:18003270-18003289 None:intergenic 20.0%
!! AAGAAAATAAAAATAACACG+TGG + chr6_3:18003277-18003296 Msa0942700:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG + chr6_3:18003389-18003408 Msa0942700:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG + chr6_3:18003391-18003410 Msa0942700:intron 20.0%
!!! GCTATTAAGTTTAGTTTATA+TGG + chr6_3:18003453-18003472 Msa0942700:intron 20.0%
!!! ATACAAGAATTTTTCTTTGA+AGG - chr6_3:18003542-18003561 None:intergenic 20.0%
!! ATATAAGAGAATGAAGAAAT+TGG - chr6_3:18003766-18003785 None:intergenic 20.0%
!! AATTACAGACAAATTAAAGA+TGG - chr6_3:18004026-18004045 None:intergenic 20.0%
! CAAATAAAGTTCATTTGATG+AGG + chr6_3:17998327-17998346 Msa0942700:CDS 25.0%
! ATTCTTGAACAATTCTTTCT+GGG - chr6_3:17998936-17998955 None:intergenic 25.0%
! AATTCTTGAACAATTCTTTC+TGG - chr6_3:17998937-17998956 None:intergenic 25.0%
!!! GAAGTTAAGATTAAGTTGAA+TGG + chr6_3:17999025-17999044 Msa0942700:CDS 25.0%
!!! TATTTGAAGTTTTCAAGAGA+TGG + chr6_3:17999581-17999600 Msa0942700:CDS 25.0%
! AGAAAAAGGAAAAGAGAATA+TGG + chr6_3:18000788-18000807 Msa0942700:CDS 25.0%
! TTATAGACAAACTGAAGTTA+TGG + chr6_3:18001366-18001385 Msa0942700:CDS 25.0%
! GTTAAAAAAGAATGTCACTA+CGG - chr6_3:18002832-18002851 None:intergenic 25.0%
!!! CTTTTGAGTATTGTTTGTTA+TGG + chr6_3:18002889-18002908 Msa0942700:intron 25.0%
! CATATTGATACATCATCTAA+GGG - chr6_3:18003029-18003048 None:intergenic 25.0%
! ACATATTGATACATCATCTA+AGG - chr6_3:18003030-18003049 None:intergenic 25.0%
! AGATGATGTATCAATATGTT+TGG + chr6_3:18003031-18003050 Msa0942700:intron 25.0%
! TCTTACTTATGTTATACTGT+TGG - chr6_3:18003096-18003115 None:intergenic 25.0%
! TGCTATAGTTACAAAACTTA+GGG - chr6_3:18003237-18003256 None:intergenic 25.0%
!! TTTTGTAACTATAGCAGTTT+TGG + chr6_3:18003241-18003260 Msa0942700:intron 25.0%
!!! TTTATTTTCTTTTGACCTTG+GGG - chr6_3:18003268-18003287 None:intergenic 25.0%
! TTGTATTTATGCTGTCTTAA+TGG + chr6_3:18003556-18003575 Msa0942700:intron 25.0%
! AAAAAAAGAATTAGATGCCA+TGG + chr6_3:18003655-18003674 Msa0942700:intron 25.0%
!!! CACAATTTTATTTGATTCCA+TGG - chr6_3:18003675-18003694 None:intergenic 25.0%
! CATGGAATCAAATAAAATTG+TGG + chr6_3:18003673-18003692 Msa0942700:intron 25.0%
!!! TTTAGGGACTTTTGTTTATT+TGG + chr6_3:18003856-18003875 Msa0942700:intron 25.0%
!! ATGTTGTTATCTTTGTTTGT+AGG + chr6_3:18004058-18004077 Msa0942700:intron 25.0%
!! TAGTCCTAAAAACCTTTTAT+TGG + chr6_3:18004280-18004299 Msa0942700:intron 25.0%
!! TGAACCAATAAAAGGTTTTT+AGG - chr6_3:18004287-18004306 None:intergenic 25.0%
!!! AACCTTTTATTGGTTCAAAA+CGG + chr6_3:18004290-18004309 Msa0942700:intron 25.0%
! AAAATTTGGAAGATCAACAA+AGG + chr6_3:18004322-18004341 Msa0942700:intron 25.0%
GTGAAAATTGAAAAGTTCGA+TGG + chr6_3:17998059-17998078 Msa0942700:CDS 30.0%
! TGAACTTTATTTGATGCTGA+AGG - chr6_3:17998320-17998339 None:intergenic 30.0%
ATAAAGTTCATTTGATGAGG+CGG + chr6_3:17998330-17998349 Msa0942700:CDS 30.0%
GATACCAACTGAACTTAATT+GGG - chr6_3:17998426-17998445 None:intergenic 30.0%
ACTACGATGATTTCTGAATT+TGG - chr6_3:17998705-17998724 None:intergenic 30.0%
TACATGATTGTTCATTTCCA+AGG - chr6_3:17998988-17999007 None:intergenic 30.0%
TGGAAATGAACAATCATGTA+AGG + chr6_3:17998988-17999007 Msa0942700:CDS 30.0%
GATGATTGGAAGATTTCAAA+AGG + chr6_3:17999154-17999173 Msa0942700:CDS 30.0%
CAAATGAAAATCCCAATCTA+TGG + chr6_3:17999257-17999276 Msa0942700:CDS 30.0%
ATATGTGAAGACTGTATACT+TGG + chr6_3:17999370-17999389 Msa0942700:CDS 30.0%
GTAGCAAAACTTCTTGAATT+TGG - chr6_3:17999683-17999702 None:intergenic 30.0%
GGATGATGAAAACAAAAAGA+TGG + chr6_3:18000074-18000093 Msa0942700:CDS 30.0%
TTTGATCTCAAATCAGACAT+GGG + chr6_3:18000464-18000483 Msa0942700:CDS 30.0%
AGGTTAAAGAAAAGCTTGTA+TGG + chr6_3:18000816-18000835 Msa0942700:CDS 30.0%
GTCAAAAGAATTTGACATGA+AGG + chr6_3:18001037-18001056 Msa0942700:CDS 30.0%
GAATTTGACATGAAGGATTT+AGG + chr6_3:18001044-18001063 Msa0942700:CDS 30.0%
! ATTCCAAGAATTTTCTTTGC+CGG - chr6_3:18001071-18001090 None:intergenic 30.0%
TGTTGAATCTTTGCAAAACA+CGG - chr6_3:18001154-18001173 None:intergenic 30.0%
! TGTTTTGCAAAGATTCAACA+TGG + chr6_3:18001154-18001173 Msa0942700:CDS 30.0%
! GTTTTGCAAAGATTCAACAT+GGG + chr6_3:18001155-18001174 Msa0942700:CDS 30.0%
! ACTTGAAGACTGATTTCAAT+CGG - chr6_3:18001458-18001477 None:intergenic 30.0%
ATTGAAATCAGTCTTCAAGT+GGG + chr6_3:18001458-18001477 Msa0942700:intron 30.0%
AGAAAATTCTTGGGTGTAAT+TGG + chr6_3:18001809-18001828 Msa0942700:intron 30.0%
GAAAATTCTTGGGTGTAATT+GGG + chr6_3:18001810-18001829 Msa0942700:intron 30.0%
! GCTGCAGATCTTTTAATAAA+GGG - chr6_3:18001880-18001899 None:intergenic 30.0%
! TGCTGCAGATCTTTTAATAA+AGG - chr6_3:18001881-18001900 None:intergenic 30.0%
ACAAGATTGTTAACGAAGTT+CGG - chr6_3:18001930-18001949 None:intergenic 30.0%
AAGTAGAAGTGGAATAAATG+CGG - chr6_3:18001964-18001983 None:intergenic 30.0%
! CACACTCACATTTTATTGTA+CGG + chr6_3:18002091-18002110 Msa0942700:intron 30.0%
CTAGCTTCATTACAAAAAGA+AGG - chr6_3:18002154-18002173 None:intergenic 30.0%
CAAAATCGCAATCAAAATCA+AGG + chr6_3:18002286-18002305 Msa0942700:intron 30.0%
GTTCATGTAGTTTGATTACT+TGG - chr6_3:18002425-18002444 None:intergenic 30.0%
TTATTTATAGAAGCAGGTCA+TGG + chr6_3:18002498-18002517 Msa0942700:intron 30.0%
TATTTATAGAAGCAGGTCAT+GGG + chr6_3:18002499-18002518 Msa0942700:intron 30.0%
GTCCTTTAACTATAACAAGA+CGG + chr6_3:18002726-18002745 Msa0942700:intron 30.0%
! ATCCGTCTTGTTATAGTTAA+AGG - chr6_3:18002731-18002750 None:intergenic 30.0%
!! ATGAACTTCCACTGATTTAT+TGG + chr6_3:18002859-18002878 Msa0942700:intron 30.0%
AACTGCTATTAAGAAGAGTA+AGG - chr6_3:18003147-18003166 None:intergenic 30.0%
CTATAGTTACAAAACTTAGG+GGG - chr6_3:18003235-18003254 None:intergenic 30.0%
GCTATAGTTACAAAACTTAG+GGG - chr6_3:18003236-18003255 None:intergenic 30.0%
CTGCTATAGTTACAAAACTT+AGG - chr6_3:18003238-18003257 None:intergenic 30.0%
! TTATTTTCTTTTGACCTTGG+GGG - chr6_3:18003267-18003286 None:intergenic 30.0%
!! ATTTTTCTTTGAAGGAGATG+TGG - chr6_3:18003534-18003553 None:intergenic 30.0%
AACTCTGATTCAAGACATTT+AGG + chr6_3:18003839-18003858 Msa0942700:intron 30.0%
ACTCTGATTCAAGACATTTA+GGG + chr6_3:18003840-18003859 Msa0942700:intron 30.0%
ACAAATTAAAGATGGTTTCC+GGG - chr6_3:18004018-18004037 None:intergenic 30.0%
GACAAATTAAAGATGGTTTC+CGG - chr6_3:18004019-18004038 None:intergenic 30.0%
TTTACCCATTGAACAAGTAA+GGG + chr6_3:18004223-18004242 Msa0942700:intron 30.0%
!! TACCGTTTTGAACCAATAAA+AGG - chr6_3:18004295-18004314 None:intergenic 30.0%
! ATTATCACAGTCAAAGCTTT+TGG + chr6_3:18004399-18004418 Msa0942700:intron 30.0%
!! AGTTTGTTTGACATGGATTT+TGG - chr6_3:18004448-18004467 None:intergenic 30.0%
AATCCATGTCAAACAAACTT+TGG + chr6_3:18004449-18004468 Msa0942700:CDS 30.0%
! AAACCAAAGTTTGTTTGACA+TGG - chr6_3:18004455-18004474 None:intergenic 30.0%
ATGTCAAACAAACTTTGGTT+TGG + chr6_3:18004454-18004473 Msa0942700:CDS 30.0%
AATTGAAAAGTTCGATGGTG+CGG + chr6_3:17998064-17998083 Msa0942700:CDS 35.0%
AAAGAAACCAGAATCGATGA+AGG + chr6_3:17998157-17998176 Msa0942700:CDS 35.0%
ACAACCCAATTAAGTTCAGT+TGG + chr6_3:17998419-17998438 Msa0942700:CDS 35.0%
CGATACCAACTGAACTTAAT+TGG - chr6_3:17998427-17998446 None:intergenic 35.0%
!! ATTTGATGATGTTCGTGATC+TGG + chr6_3:17998553-17998572 Msa0942700:CDS 35.0%
AGAAATTCAACCAGAGGAAA+TGG + chr6_3:17998653-17998672 Msa0942700:CDS 35.0%
AAATGGACGTGGTAAATCAA+AGG + chr6_3:17998670-17998689 Msa0942700:CDS 35.0%
ATTTCTGAATTTGGATCGTC+TGG - chr6_3:17998696-17998715 None:intergenic 35.0%
GACACTTCAAAAATCAGTGT+AGG + chr6_3:17998771-17998790 Msa0942700:CDS 35.0%
TTGTTCAAGAATTATGTCCC+TGG + chr6_3:17998944-17998963 Msa0942700:CDS 35.0%
AAACTTTACCAAGGTTACCA+GGG - chr6_3:17998964-17998983 None:intergenic 35.0%
TAAACTTTACCAAGGTTACC+AGG - chr6_3:17998965-17998984 None:intergenic 35.0%
AACCTTGGTAAAGTTTACCT+TGG + chr6_3:17998968-17998987 Msa0942700:CDS 35.0%
TTCCAAGGTAAACTTTACCA+AGG - chr6_3:17998973-17998992 None:intergenic 35.0%
TGAACAATCATGTAAGGTTG+TGG + chr6_3:17998994-17999013 Msa0942700:CDS 35.0%
GAACAATCATGTAAGGTTGT+GGG + chr6_3:17998995-17999014 Msa0942700:CDS 35.0%
!! TTAAGTTGAATGGGTCTGTA+TGG + chr6_3:17999035-17999054 Msa0942700:CDS 35.0%
! TAAGTTGAATGGGTCTGTAT+GGG + chr6_3:17999036-17999055 Msa0942700:CDS 35.0%
! ATTAAGTTTTTCGTGAGGTC+GGG - chr6_3:17999085-17999104 None:intergenic 35.0%
! GATTAAGTTTTTCGTGAGGT+CGG - chr6_3:17999086-17999105 None:intergenic 35.0%
ACGAAAAACTTAATCTCCGT+AGG + chr6_3:17999091-17999110 Msa0942700:CDS 35.0%
TTGTTGCAACTGCAATCAAA+TGG - chr6_3:17999240-17999259 None:intergenic 35.0%
AATCTCTTGTGCCATAGATT+GGG - chr6_3:17999271-17999290 None:intergenic 35.0%
TAATCTCTTGTGCCATAGAT+TGG - chr6_3:17999272-17999291 None:intergenic 35.0%
AATCTATGGCACAAGAGATT+AGG + chr6_3:17999271-17999290 Msa0942700:CDS 35.0%
ATTAGGCCATATGAGTGAAA+AGG + chr6_3:17999288-17999307 Msa0942700:CDS 35.0%
TTAGGCCATATGAGTGAAAA+GGG + chr6_3:17999289-17999308 Msa0942700:CDS 35.0%
ATGAAGGTTATGCACTCAAA+AGG + chr6_3:17999313-17999332 Msa0942700:CDS 35.0%
AAGGAAAACTACCAAGTCTT+CGG + chr6_3:17999332-17999351 Msa0942700:CDS 35.0%
ATTTCTATTGACCGAAGACT+TGG - chr6_3:17999346-17999365 None:intergenic 35.0%
! CTTTTATCGATGATCACTCT+AGG + chr6_3:17999521-17999540 Msa0942700:CDS 35.0%
TTCATATTCACCACCATTGT+CGG - chr6_3:17999656-17999675 None:intergenic 35.0%
ACAAAATACCAGAAGAGGTA+TGG + chr6_3:17999899-17999918 Msa0942700:CDS 35.0%
! CTCTCACATCTTAGAGTTTT+TGG + chr6_3:17999940-17999959 Msa0942700:CDS 35.0%
TATGTGCACATTAGTGATCA+AGG + chr6_3:17999973-17999992 Msa0942700:CDS 35.0%
AAAGTGCACTTCTTGGATTT+GGG - chr6_3:18000015-18000034 None:intergenic 35.0%
!!! TTTTGTTTTCATCATCCCAG+AGG - chr6_3:18000071-18000090 None:intergenic 35.0%
AAAGAGTGATGTACAAAGAC+AGG + chr6_3:18000124-18000143 Msa0942700:CDS 35.0%
TCATCCATCTCTACATAAAC+AGG - chr6_3:18000186-18000205 None:intergenic 35.0%
CTTAATTCAGGAACTGAAGT+AGG - chr6_3:18000297-18000316 None:intergenic 35.0%
CTTCAGTTCCTGAATTAAGA+AGG + chr6_3:18000298-18000317 Msa0942700:CDS 35.0%
CTAGAAGACCTTCTTAATTC+AGG - chr6_3:18000309-18000328 None:intergenic 35.0%
GACTACATGTTGTTAACTGA+TGG + chr6_3:18000357-18000376 Msa0942700:CDS 35.0%
TACATGTTGTTAACTGATGG+AGG + chr6_3:18000360-18000379 Msa0942700:CDS 35.0%
CATGCTTCATCATAATCTTC+AGG - chr6_3:18000390-18000409 None:intergenic 35.0%
AGACTTCATTTCGTCTTTCA+TGG - chr6_3:18000445-18000464 None:intergenic 35.0%
CTTTGATCTCAAATCAGACA+TGG + chr6_3:18000463-18000482 Msa0942700:CDS 35.0%
! CTCAAGATAGAGATTTTCGA+TGG - chr6_3:18000691-18000710 None:intergenic 35.0%
TCTTCATGGAGACTTAAATG+AGG + chr6_3:18000734-18000753 Msa0942700:CDS 35.0%
GTTTGAAAACTTCATGCACA+AGG + chr6_3:18000872-18000891 Msa0942700:CDS 35.0%
ATCTCTTGAAGAAGCAACAA+TGG - chr6_3:18000923-18000942 None:intergenic 35.0%
!! GTTGATGATATGTTAGTAGC+AGG + chr6_3:18000975-18000994 Msa0942700:CDS 35.0%
ATCACGAGAGATAAGCAAAA+AGG + chr6_3:18001095-18001114 Msa0942700:CDS 35.0%
AAGTTATGGTCAACTTCAGT+TGG + chr6_3:18001380-18001399 Msa0942700:intron 35.0%
GATTGAAATCAGTCTTCAAG+TGG + chr6_3:18001457-18001476 Msa0942700:intron 35.0%
TGTTACACAAACTCTTGTGT+AGG + chr6_3:18001542-18001561 Msa0942700:CDS 35.0%
GTTACACAAACTCTTGTGTA+GGG + chr6_3:18001543-18001562 Msa0942700:CDS 35.0%
TCTTGTCATGCTTTCAAACT+TGG - chr6_3:18001583-18001602 None:intergenic 35.0%
! TTTGAAAGCATGACAAGAGT+TGG + chr6_3:18001585-18001604 Msa0942700:intron 35.0%
CTATTTATAGATGCAGGAAG+TGG - chr6_3:18001686-18001705 None:intergenic 35.0%
CTTCCTGCATCTATAAATAG+AGG + chr6_3:18001686-18001705 Msa0942700:intron 35.0%
AAGCCTCTATTTATAGATGC+AGG - chr6_3:18001692-18001711 None:intergenic 35.0%
TGCATCTATAAATAGAGGCT+TGG + chr6_3:18001691-18001710 Msa0942700:intron 35.0%
ATGGTCAGATTAAGTAGAAG+TGG - chr6_3:18001975-18001994 None:intergenic 35.0%
ACTTCTACTTAATCTGACCA+TGG + chr6_3:18001974-18001993 Msa0942700:intron 35.0%
CTTCTACTTAATCTGACCAT+GGG + chr6_3:18001975-18001994 Msa0942700:intron 35.0%
TTCTACTTAATCTGACCATG+GGG + chr6_3:18001976-18001995 Msa0942700:intron 35.0%
! TTGATGACATCATAGCTGTT+AGG - chr6_3:18002018-18002037 None:intergenic 35.0%
GATCACGACATCAAAATTGA+TGG + chr6_3:18002113-18002132 Msa0942700:intron 35.0%
TGTAATGAAGCTAGCTATCA+AGG + chr6_3:18002160-18002179 Msa0942700:intron 35.0%
GCTATCAAGGTTGTCAAAAT+CGG + chr6_3:18002173-18002192 Msa0942700:intron 35.0%
CTATCAAGGTTGTCAAAATC+GGG + chr6_3:18002174-18002193 Msa0942700:intron 35.0%
GAAATCGCAATCAAAATCGA+AGG + chr6_3:18002209-18002228 Msa0942700:intron 35.0%
TATAAAAATAGCGCAGAGTC+TGG + chr6_3:18002396-18002415 Msa0942700:intron 35.0%
CAAATTGGACCATTTGACTA+TGG + chr6_3:18002524-18002543 Msa0942700:intron 35.0%
! TGTGCGATTTTTCCATGTTT+TGG + chr6_3:18002559-18002578 Msa0942700:intron 35.0%
! GTGCGATTTTTCCATGTTTT+GGG + chr6_3:18002560-18002579 Msa0942700:intron 35.0%
CATAGCAAAATCCCAAAACA+TGG - chr6_3:18002574-18002593 None:intergenic 35.0%
!!! CATGTTTTGGGATTTTGCTA+TGG + chr6_3:18002572-18002591 Msa0942700:intron 35.0%
! AGTAGCAAAATCCTCGATTT+TGG + chr6_3:18002619-18002638 Msa0942700:intron 35.0%
! GTAGCAAAATCCTCGATTTT+GGG + chr6_3:18002620-18002639 Msa0942700:intron 35.0%
CACTAAAGAGAAGCAAACTT+TGG - chr6_3:18002671-18002690 None:intergenic 35.0%
! TGAGTTCTGTTTTGCATCTA+AGG - chr6_3:18002959-18002978 None:intergenic 35.0%
! TTTTGCATCTGTGGCAATTT+TGG - chr6_3:18003358-18003377 None:intergenic 35.0%
! ACTTCTAAGTTTTGCATCTG+TGG - chr6_3:18003367-18003386 None:intergenic 35.0%
CAGATGCAAAACTTAGAAGT+CGG + chr6_3:18003367-18003386 Msa0942700:intron 35.0%
! CTTTTCCAAAGTTGGGATTT+TGG - chr6_3:18003417-18003436 None:intergenic 35.0%
! ATCCCAACTTTGGAAAAGTT+AGG + chr6_3:18003419-18003438 Msa0942700:intron 35.0%
! TCCCAACTTTGGAAAAGTTA+GGG + chr6_3:18003420-18003439 Msa0942700:intron 35.0%
! TCCCTAACTTTTCCAAAGTT+GGG - chr6_3:18003424-18003443 None:intergenic 35.0%
CTGTCTTAATGGAAAAAGAC+TGG + chr6_3:18003567-18003586 Msa0942700:intron 35.0%
ATGCAATCTTGTGTTCACAT+GGG - chr6_3:18003799-18003818 None:intergenic 35.0%
TATGCAATCTTGTGTTCACA+TGG - chr6_3:18003800-18003819 None:intergenic 35.0%
AATGTCTTGAATCAGAGTTG+TGG - chr6_3:18003838-18003857 None:intergenic 35.0%
TATGTGGATGAACATCCTTA+GGG + chr6_3:18003920-18003939 Msa0942700:intron 35.0%
!!! TTAAGCTTTTTTGTAGTCCC+CGG + chr6_3:18003997-18004016 Msa0942700:intron 35.0%
CAAATTAAAGATGGTTTCCG+GGG - chr6_3:18004017-18004036 None:intergenic 35.0%
TATGCTTTCGTGATGTTTCA+TGG + chr6_3:18004114-18004133 Msa0942700:CDS 35.0%
! CTCTTTTGCTTAGATTTTGC+CGG + chr6_3:18004192-18004211 Msa0942700:CDS 35.0%
GTTTACCCATTGAACAAGTA+AGG + chr6_3:18004222-18004241 Msa0942700:intron 35.0%
AACGGTAGACTCACAAAATT+TGG + chr6_3:18004308-18004327 Msa0942700:intron 35.0%
! CAAAACATGGTGATTTTGTG+AGG - chr6_3:18004488-18004507 None:intergenic 35.0%
! CTCACAAAATCACCATGTTT+TGG + chr6_3:18004486-18004505 Msa0942700:CDS 35.0%
!! TCTGGTTTCTTTTCTGTGAG+AGG - chr6_3:17998149-17998168 None:intergenic 40.0%
!! TCATCATCCTTCATCGATTC+TGG - chr6_3:17998167-17998186 None:intergenic 40.0%
AATCGATGAAGGATGATGAG+TGG + chr6_3:17998168-17998187 Msa0942700:CDS 40.0%
TTTACACTTCGGATGACAGA+AGG + chr6_3:17998356-17998375 Msa0942700:CDS 40.0%
! TGGTATCGAATTTGACGATG+AGG + chr6_3:17998439-17998458 Msa0942700:CDS 40.0%
TTTCATCTTTATGCTTCCCG+AGG - chr6_3:17998534-17998553 None:intergenic 40.0%
CTCTGTATGCAATACTGAAG+AGG - chr6_3:17998624-17998643 None:intergenic 40.0%
GTATTGCATACAGAGTCAAG+AGG + chr6_3:17998629-17998648 Msa0942700:CDS 40.0%
AGAGGAAGAAATTCAACCAG+AGG + chr6_3:17998647-17998666 Msa0942700:CDS 40.0%
ACTCGAAATCTATCGAGTGT+TGG + chr6_3:17998732-17998751 Msa0942700:CDS 40.0%
!! TCTATCGAGTGTTGGAATTG+TGG + chr6_3:17998740-17998759 Msa0942700:CDS 40.0%
GTGTTGGAATTGTGGAAAGA+CGG + chr6_3:17998748-17998767 Msa0942700:CDS 40.0%
TGTTGGAATTGTGGAAAGAC+GGG + chr6_3:17998749-17998768 Msa0942700:CDS 40.0%
! TGACGCGTTGATATGTTCTT+TGG + chr6_3:17998856-17998875 Msa0942700:CDS 40.0%
! GATATGTTCTTTGGAGAGCA+AGG + chr6_3:17998865-17998884 Msa0942700:CDS 40.0%
! GAACAATTCTTTCTGGGAAG+TGG - chr6_3:17998930-17998949 None:intergenic 40.0%
AATTATGTCCCTGGTAACCT+TGG + chr6_3:17998953-17998972 Msa0942700:CDS 40.0%
! CGGAGATTAAGTTTTTCGTG+AGG - chr6_3:17999090-17999109 None:intergenic 40.0%
AAATCTTCCAATCATCACCG+TGG - chr6_3:17999150-17999169 None:intergenic 40.0%
TAGGCCATATGAGTGAAAAG+GGG + chr6_3:17999290-17999309 Msa0942700:CDS 40.0%
! TCATCCCCTTTTCACTCATA+TGG - chr6_3:17999297-17999316 None:intergenic 40.0%
TATGAGTGAAAAGGGGATGA+AGG + chr6_3:17999297-17999316 Msa0942700:CDS 40.0%
CTCAAGTTTCTCCTTCTTTG+GGG - chr6_3:17999434-17999453 None:intergenic 40.0%
GCTCAAGTTTCTCCTTCTTT+GGG - chr6_3:17999435-17999454 None:intergenic 40.0%
AGCTCAAGTTTCTCCTTCTT+TGG - chr6_3:17999436-17999455 None:intergenic 40.0%
! TATCGATGATCACTCTAGGA+AGG + chr6_3:17999525-17999544 Msa0942700:CDS 40.0%
! ATGATCACTCTAGGAAGGTA+TGG + chr6_3:17999530-17999549 Msa0942700:CDS 40.0%
! TGATCACTCTAGGAAGGTAT+GGG + chr6_3:17999531-17999550 Msa0942700:CDS 40.0%
TTTCAAGAGATGGAAAGCCA+TGG + chr6_3:17999591-17999610 Msa0942700:CDS 40.0%
! ACTTGTCTCATTTTCCACCA+TGG - chr6_3:17999611-17999630 None:intergenic 40.0%
AAAAAGCTCAGAACCGACAA+TGG + chr6_3:17999640-17999659 Msa0942700:CDS 40.0%
! AAGAAGTTTTGCTACGAGCA+CGG + chr6_3:17999688-17999707 Msa0942700:CDS 40.0%
AGGCTTACCAAAGAACTTCT+GGG + chr6_3:17999816-17999835 Msa0942700:CDS 40.0%
! TCTGGTATTTTGTGCTCCAA+TGG - chr6_3:17999892-17999911 None:intergenic 40.0%
! GAAAGTGCACTTCTTGGATT+TGG - chr6_3:18000016-18000035 None:intergenic 40.0%
! TCCAAGAAGTGCACTTTCAT+CGG + chr6_3:18000018-18000037 Msa0942700:CDS 40.0%
! AAGTGCACTTTCATCGGTTA+TGG + chr6_3:18000024-18000043 Msa0942700:CDS 40.0%
GGTTATGGTGAAGATGAGTT+TGG + chr6_3:18000039-18000058 Msa0942700:CDS 40.0%
TTCTGCCAATTCCTCTGATT+GGG - chr6_3:18000238-18000257 None:intergenic 40.0%
ATTCTGCCAATTCCTCTGAT+TGG - chr6_3:18000239-18000258 None:intergenic 40.0%
GAACTAGCTAAGTTACCCAT+GGG + chr6_3:18000486-18000505 Msa0942700:CDS 40.0%
TAAGTTACCCATGGGAAAGA+AGG + chr6_3:18000494-18000513 Msa0942700:CDS 40.0%
!! AGAAGGCACTTCACAACAAA+TGG + chr6_3:18000511-18000530 Msa0942700:CDS 40.0%
!! GAAGGCACTTCACAACAAAT+GGG + chr6_3:18000512-18000531 Msa0942700:CDS 40.0%
CAAATGGGTGTATCGAGTAA+AGG + chr6_3:18000527-18000546 Msa0942700:CDS 40.0%
TGTATCTCTTAGAGCCATCA+TGG - chr6_3:18000557-18000576 None:intergenic 40.0%
AAAGGATTCCAGCAGAAAGA+AGG + chr6_3:18000594-18000613 Msa0942700:CDS 40.0%
AGTCAATTCCTTCTTTCTGC+TGG - chr6_3:18000605-18000624 None:intergenic 40.0%
! ATAGTATTGAGCTTCACCAC+TGG - chr6_3:18000645-18000664 None:intergenic 40.0%
TGGTGAAGCTCAATACTATC+AGG + chr6_3:18000646-18000665 Msa0942700:CDS 40.0%
GTGAAGACTGCATTTCTTCA+TGG + chr6_3:18000720-18000739 Msa0942700:CDS 40.0%
ATATACATGCACCAACCAGA+AGG + chr6_3:18000759-18000778 Msa0942700:CDS 40.0%
! TTTCTGAGAATCCTTCTGGT+TGG - chr6_3:18000773-18000792 None:intergenic 40.0%
!! CCTTTTTCTGAGAATCCTTC+TGG - chr6_3:18000777-18000796 None:intergenic 40.0%
CCAGAAGGATTCTCAGAAAA+AGG + chr6_3:18000774-18000793 Msa0942700:CDS 40.0%
GAAAAGAGAATATGGTGTGC+AGG + chr6_3:18000796-18000815 Msa0942700:CDS 40.0%
AACTTCATATACCACTGCCT+TGG - chr6_3:18000855-18000874 None:intergenic 40.0%
GAAAACTTCATGCACAAGGA+AGG + chr6_3:18000876-18000895 Msa0942700:CDS 40.0%
CTTGAAGAAGCAACAATGGT+CGG - chr6_3:18000919-18000938 None:intergenic 40.0%
TGACATGAAGGATTTAGGTC+CGG + chr6_3:18001049-18001068 Msa0942700:CDS 40.0%
GAGGTGATTGTTCTTGAGAT+AGG - chr6_3:18001223-18001242 None:intergenic 40.0%
TCAAGAACAATCACCTCAGA+CGG + chr6_3:18001226-18001245 Msa0942700:CDS 40.0%
GGAGGAAGAAAAAGAACTCA+TGG + chr6_3:18001247-18001266 Msa0942700:CDS 40.0%
GGCTAAGATTCCATATGCTT+CGG + chr6_3:18001268-18001287 Msa0942700:CDS 40.0%
ATTCCATATGCTTCGGCAAT+TGG + chr6_3:18001275-18001294 Msa0942700:CDS 40.0%
TTAGAGTAAGAGACCAGAGA+AGG + chr6_3:18001407-18001426 Msa0942700:intron 40.0%
! CAAAATCGGGATTTTGCTTC+TGG + chr6_3:18002187-18002206 Msa0942700:intron 40.0%
GCGTGAAATCCATAGTCAAA+TGG - chr6_3:18002536-18002555 None:intergenic 40.0%
GGATTTGAGTCATTGAAGCT+AGG + chr6_3:18002593-18002612 Msa0942700:intron 40.0%
GTCAGAAGCCAATAAATCAG+TGG - chr6_3:18002870-18002889 None:intergenic 40.0%
GCAACTTCGTGAAAGTTAAG+GGG - chr6_3:18003174-18003193 None:intergenic 40.0%
CGCAACTTCGTGAAAGTTAA+GGG - chr6_3:18003175-18003194 None:intergenic 40.0%
TCGCAACTTCGTGAAAGTTA+AGG - chr6_3:18003176-18003195 None:intergenic 40.0%
TAGTTACAAAACTTAGGGGG+CGG - chr6_3:18003232-18003251 None:intergenic 40.0%
! CTCCCTAACTTTTCCAAAGT+TGG - chr6_3:18003425-18003444 None:intergenic 40.0%
GGAATCTTTCTTTGCATGTG+TGG - chr6_3:18003625-18003644 None:intergenic 40.0%
TGCATCTAGCATTAGTCCTT+TGG + chr6_3:18003730-18003749 Msa0942700:intron 40.0%
AATTGGTTACAGCTCACCAA+AGG - chr6_3:18003749-18003768 None:intergenic 40.0%
GATGTTCATCCACATAGTTG+TGG - chr6_3:18003916-18003935 None:intergenic 40.0%
CTATGTGGATGAACATCCTT+AGG + chr6_3:18003919-18003938 Msa0942700:intron 40.0%
CAATGGGTAAACGATCAAAC+CGG - chr6_3:18004214-18004233 None:intergenic 40.0%
TTGGCCCTTACTTGTTCAAT+GGG - chr6_3:18004230-18004249 None:intergenic 40.0%
ATTGGCCCTTACTTGTTCAA+TGG - chr6_3:18004231-18004250 None:intergenic 40.0%
!!! AAATCACCATGTTTTGGAGC+TGG + chr6_3:18004492-18004511 Msa0942700:CDS 40.0%
CAAGTGCTTGTCTATCGAGA+AGG - chr6_3:17998196-17998215 None:intergenic 45.0%
CTTCTCGATAGACAAGCACT+TGG + chr6_3:17998194-17998213 Msa0942700:CDS 45.0%
AAGAGCCTTCATAAGACCAG+CGG - chr6_3:17998279-17998298 None:intergenic 45.0%
TGAGGCGGTTGTTTACACTT+CGG + chr6_3:17998345-17998364 Msa0942700:CDS 45.0%
TGTCTTCCCTACCAGATAGT+TGG + chr6_3:17998480-17998499 Msa0942700:CDS 45.0%
TTCTCAGTGAAGAGATCCGA+CGG + chr6_3:17998576-17998595 Msa0942700:CDS 45.0%
TTTACCACGTCCATTTCCTC+TGG - chr6_3:17998666-17998685 None:intergenic 45.0%
TCGCCTCTTGATTCTTTGCT+GGG - chr6_3:17998799-17998818 None:intergenic 45.0%
TTCGCCTCTTGATTCTTTGC+TGG - chr6_3:17998800-17998819 None:intergenic 45.0%
GAATCAAGAGGCGAAAGATG+AGG + chr6_3:17998805-17998824 Msa0942700:CDS 45.0%
TCATGTAAGGTTGTGGGCAA+AGG + chr6_3:17999001-17999020 Msa0942700:CDS 45.0%
GGTACTCTTTACAAGACAGC+TGG + chr6_3:17999208-17999227 Msa0942700:CDS 45.0%
AGAGTCAGCTTTCAGACAAG+TGG + chr6_3:17999403-17999422 Msa0942700:CDS 45.0%
AAGTGGAAGAACCCCAAAGA+AGG + chr6_3:17999420-17999439 Msa0942700:CDS 45.0%
! AGCTTGTTCACTCCGATGTT+TGG + chr6_3:17999452-17999471 Msa0942700:CDS 45.0%
GCTTGTTCACTCCGATGTTT+GGG + chr6_3:17999453-17999472 Msa0942700:CDS 45.0%
CTTGTTCACTCCGATGTTTG+GGG + chr6_3:17999454-17999473 Msa0942700:CDS 45.0%
TGTTGTTGGACCCCAAACAT+CGG - chr6_3:17999467-17999486 None:intergenic 45.0%
AATGCTTCCCACCAATGGAT+GGG - chr6_3:17999492-17999511 None:intergenic 45.0%
TAATGCTTCCCACCAATGGA+TGG - chr6_3:17999493-17999512 None:intergenic 45.0%
GAAGTAATGCTTCCCACCAA+TGG - chr6_3:17999497-17999516 None:intergenic 45.0%
! AGAAGTTTTGCTACGAGCAC+GGG + chr6_3:17999689-17999708 Msa0942700:CDS 45.0%
CTGGCACAGTTCTTTCCATT+CGG - chr6_3:17999717-17999736 None:intergenic 45.0%
TCAGCTACACCATTGTGTTG+GGG - chr6_3:17999745-17999764 None:intergenic 45.0%
CTCAGCTACACCATTGTGTT+GGG - chr6_3:17999746-17999765 None:intergenic 45.0%
CAGGCTTACCAAAGAACTTC+TGG + chr6_3:17999815-17999834 Msa0942700:CDS 45.0%
TCAGCCTACTTAATCAACCG+AGG + chr6_3:17999856-17999875 Msa0942700:CDS 45.0%
TGGACCTCGGTTGATTAAGT+AGG - chr6_3:17999863-17999882 None:intergenic 45.0%
CTTAATCAACCGAGGTCCAT+CGG + chr6_3:17999864-17999883 Msa0942700:CDS 45.0%
GGAGCACAAAATACCAGAAG+AGG + chr6_3:17999894-17999913 Msa0942700:CDS 45.0%
! ATACCAGAAGAGGTATGGAG+TGG + chr6_3:17999904-17999923 Msa0942700:CDS 45.0%
TTTCCACTCCATACCTCTTC+TGG - chr6_3:17999910-17999929 None:intergenic 45.0%
! AGAGGTATGGAGTGGAAAAG+AGG + chr6_3:17999912-17999931 Msa0942700:CDS 45.0%
! ACCGATGAAAGTGCACTTCT+TGG - chr6_3:18000022-18000041 None:intergenic 45.0%
! TGTTTTCATCATCCCAGAGG+CGG - chr6_3:18000068-18000087 None:intergenic 45.0%
AACACAACCACCAATGACTC+AGG + chr6_3:18000150-18000169 Msa0942700:CDS 45.0%
CGAGCCTGTTTATGTAGAGA+TGG + chr6_3:18000179-18000198 Msa0942700:CDS 45.0%
GTAGAGATGGATGATGTTCC+AGG + chr6_3:18000192-18000211 Msa0942700:CDS 45.0%
GATTGGGGAATCTCATCTGT+GGG - chr6_3:18000222-18000241 None:intergenic 45.0%
TGATTGGGGAATCTCATCTG+TGG - chr6_3:18000223-18000242 None:intergenic 45.0%
AGATGAGATTCCCCAATCAG+AGG + chr6_3:18000224-18000243 Msa0942700:CDS 45.0%
GATTCCCCAATCAGAGGAAT+TGG + chr6_3:18000230-18000249 Msa0942700:CDS 45.0%
TCTGCCAATTCCTCTGATTG+GGG - chr6_3:18000237-18000256 None:intergenic 45.0%
TGATGAAGCATGTCAGACCA+CGG + chr6_3:18000398-18000417 Msa0942700:CDS 45.0%
GGAACTAGCTAAGTTACCCA+TGG + chr6_3:18000485-18000504 Msa0942700:CDS 45.0%
! TGAAGTGCCTTCTTTCCCAT+GGG - chr6_3:18000504-18000523 None:intergenic 45.0%
ATGGGTGTATCGAGTAAAGG+AGG + chr6_3:18000530-18000549 Msa0942700:CDS 45.0%
GAATCCTTTGACCACTAGTC+GGG - chr6_3:18000583-18000602 None:intergenic 45.0%
GGAATCCTTTGACCACTAGT+CGG - chr6_3:18000584-18000603 None:intergenic 45.0%
CACCACTGGAGCAAAAATCT+CGG - chr6_3:18000631-18000650 None:intergenic 45.0%
GGTCCGGCAAAGAAAATTCT+TGG + chr6_3:18001065-18001084 Msa0942700:CDS 45.0%
! AGGCGAAAATGACTTGCCAA+CGG - chr6_3:18001203-18001222 None:intergenic 45.0%
! TCTTTTTCTTCCTCCGTCTG+AGG - chr6_3:18001242-18001261 None:intergenic 45.0%
CTTCCAATTGCCGAAGCATA+TGG - chr6_3:18001281-18001300 None:intergenic 45.0%
TGGAAGTTTGATGTACGCGA+TGG + chr6_3:18001295-18001314 Msa0942700:CDS 45.0%
CTCTGGTCTCTTACTCTAAC+AGG - chr6_3:18001406-18001425 None:intergenic 45.0%
GTCATGCTTTCAAACTTGGC+AGG - chr6_3:18001579-18001598 None:intergenic 45.0%
! GAAAGCATGACAAGAGTTGG+TGG + chr6_3:18001588-18001607 Msa0942700:intron 45.0%
!! ATGACAAGAGTTGGTGGCAA+GGG + chr6_3:18001594-18001613 Msa0942700:intron 45.0%
! TCTTGGGTGTAATTGGGTTG+TGG + chr6_3:18001816-18001835 Msa0942700:intron 45.0%
! CTTGGGTGTAATTGGGTTGT+GGG + chr6_3:18001817-18001836 Msa0942700:intron 45.0%
AACTACGCACAATTTCCCCA+TGG - chr6_3:18001994-18002013 None:intergenic 45.0%
! TGAACCGTGATGATGAAGTG+TGG + chr6_3:18002440-18002459 Msa0942700:intron 45.0%
CACACCACACTTCATCATCA+CGG - chr6_3:18002447-18002466 None:intergenic 45.0%
AGCAGGTCATGGGTACAAAT+TGG + chr6_3:18002509-18002528 Msa0942700:intron 45.0%
CGACTTAAGTCCCAAAATCG+AGG - chr6_3:18002633-18002652 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG + chr6_3:18003323-18003342 Msa0942700:intron 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG + chr6_3:18003330-18003349 Msa0942700:intron 45.0%
TTTCTTTGCATGTGTGGTCC+TGG - chr6_3:18003619-18003638 None:intergenic 45.0%
GAATCAGAGTTGTGGCTACT+TGG - chr6_3:18003830-18003849 None:intergenic 45.0%
GAAGATCAGCCACAACTATG+TGG + chr6_3:18003904-18003923 Msa0942700:intron 45.0%
TGGATGAACATCCTTAGGGA+TGG + chr6_3:18003924-18003943 Msa0942700:intron 45.0%
GGATGAACATCCTTAGGGAT+GGG + chr6_3:18003925-18003944 Msa0942700:intron 45.0%
! GTGGATTCGGTAAAACATCG+AGG + chr6_3:18003947-18003966 Msa0942700:intron 45.0%
! GATTCGGTAAAACATCGAGG+AGG + chr6_3:18003950-18003969 Msa0942700:intron 45.0%
! ATGAGGAGAGAGTTTTCCTC+CGG - chr6_3:18004150-18004169 None:intergenic 45.0%
AGGAAAACTCTCTCCTCATG+AGG + chr6_3:18004151-18004170 Msa0942700:CDS 45.0%
GCATTAGAGAACACCTCATG+AGG - chr6_3:18004167-18004186 None:intergenic 45.0%
CTAAATAGCGATCCAAGTGG+CGG - chr6_3:18004263-18004282 None:intergenic 45.0%
GGACTAAATAGCGATCCAAG+TGG - chr6_3:18004266-18004285 None:intergenic 45.0%
TTGTCACCAGCTCCAAAACA+TGG - chr6_3:18004501-18004520 None:intergenic 45.0%
!!! ATTCTTTTTTTTTTTTTAAA+AGG - chr6_3:18003646-18003665 None:intergenic 5.0%
AAGTTCGATGGTGCGGACTT+TGG + chr6_3:17998071-17998090 Msa0942700:CDS 50.0%
!!! ATGGTGCGGACTTTGGCTTT+TGG + chr6_3:17998078-17998097 Msa0942700:CDS 50.0%
GCAAAAGAGAAAACCACCGC+TGG + chr6_3:17998260-17998279 Msa0942700:CDS 50.0%
!! AACCACCGCTGGTCTTATGA+AGG + chr6_3:17998271-17998290 Msa0942700:CDS 50.0%
AGCGCTCCAACTATCTGGTA+GGG - chr6_3:17998489-17998508 None:intergenic 50.0%
TAGCGCTCCAACTATCTGGT+AGG - chr6_3:17998490-17998509 None:intergenic 50.0%
ACAGTAGCGCTCCAACTATC+TGG - chr6_3:17998494-17998513 None:intergenic 50.0%
ATTCACCCAACTCTCTCCGT+CGG - chr6_3:17998595-17998614 None:intergenic 50.0%
TCAACCAGAGGAAATGGACG+TGG + chr6_3:17998659-17998678 Msa0942700:CDS 50.0%
GCTCCCAGCAAAGAATCAAG+AGG + chr6_3:17998793-17998812 Msa0942700:CDS 50.0%
! GCAAATGTTGCTTCCACCTC+AGG + chr6_3:17998827-17998846 Msa0942700:CDS 50.0%
! AATGTTGCTTCCACCTCAGG+AGG + chr6_3:17998830-17998849 Msa0942700:CDS 50.0%
TGGAGAGCAAGGAAGAGTCT+TGG + chr6_3:17998876-17998895 Msa0942700:CDS 50.0%
GGAGAGCAAGGAAGAGTCTT+GGG + chr6_3:17998877-17998896 Msa0942700:CDS 50.0%
GAGTCTTGGGTGTTAGACTC+TGG + chr6_3:17998890-17998909 Msa0942700:CDS 50.0%
CTTAATCTCCGTAGGCCAGT+TGG + chr6_3:17999099-17999118 Msa0942700:CDS 50.0%
GGCTACACAACAGTCTTCCA+CGG + chr6_3:17999130-17999149 Msa0942700:CDS 50.0%
CAGTCTTCCACGGTGATGAT+TGG + chr6_3:17999140-17999159 Msa0942700:CDS 50.0%
ATAGCTCGCGGTAGAAAGAG+TGG + chr6_3:17999187-17999206 Msa0942700:CDS 50.0%
CCAATGGATGGGACTGTTGT+TGG - chr6_3:17999481-17999500 None:intergenic 50.0%
CCAACAACAGTCCCATCCAT+TGG + chr6_3:17999478-17999497 Msa0942700:CDS 50.0%
ACAACAGTCCCATCCATTGG+TGG + chr6_3:17999481-17999500 Msa0942700:CDS 50.0%
CAACAGTCCCATCCATTGGT+GGG + chr6_3:17999482-17999501 Msa0942700:CDS 50.0%
CAAGAGATGGAAAGCCATGG+TGG + chr6_3:17999594-17999613 Msa0942700:CDS 50.0%
AAGCTCAGAACCGACAATGG+TGG + chr6_3:17999643-17999662 Msa0942700:CDS 50.0%
CGAATGGAAAGAACTGTGCC+AGG + chr6_3:17999715-17999734 Msa0942700:CDS 50.0%
GCTCAGCTACACCATTGTGT+TGG - chr6_3:17999747-17999766 None:intergenic 50.0%
GCTTCTGCCCAGAAGTTCTT+TGG - chr6_3:17999826-17999845 None:intergenic 50.0%
GCTCAATCCTGAGTCATTGG+TGG - chr6_3:18000160-18000179 None:intergenic 50.0%
CTCGCTCAATCCTGAGTCAT+TGG - chr6_3:18000163-18000182 None:intergenic 50.0%
ATCTCATCTGTGGGACTTCC+TGG - chr6_3:18000213-18000232 None:intergenic 50.0%
GGAACTGAAGTAGGATGCAC+TGG - chr6_3:18000288-18000307 None:intergenic 50.0%
AGACCACGGATGCTAGTAAG+TGG + chr6_3:18000412-18000431 Msa0942700:CDS 50.0%
GACCACGGATGCTAGTAAGT+GGG + chr6_3:18000413-18000432 Msa0942700:CDS 50.0%
! GTGAAGTGCCTTCTTTCCCA+TGG - chr6_3:18000505-18000524 None:intergenic 50.0%
CGAGTAAAGGAGGACCATGA+TGG + chr6_3:18000540-18000559 Msa0942700:CDS 50.0%
GAGATACAAAGCCCGACTAG+TGG + chr6_3:18000569-18000588 Msa0942700:CDS 50.0%
AAAGCCCGACTAGTGGTCAA+AGG + chr6_3:18000576-18000595 Msa0942700:CDS 50.0%
! CACCGAGATTTTTGCTCCAG+TGG + chr6_3:18000626-18000645 Msa0942700:CDS 50.0%
ATGGCCTGAAACAAGCTCCA+AGG + chr6_3:18000835-18000854 Msa0942700:CDS 50.0%
! ACTGCCTTGGAGCTTGTTTC+AGG - chr6_3:18000842-18000861 None:intergenic 50.0%
TGAAACAAGCTCCAAGGCAG+TGG + chr6_3:18000841-18000860 Msa0942700:CDS 50.0%
AATGGTCGGCATTGCACTTC+TGG - chr6_3:18000905-18000924 None:intergenic 50.0%
AGAACAATCACCTCAGACGG+AGG + chr6_3:18001229-18001248 Msa0942700:CDS 50.0%
TGCTAACAACTCCCACTGCA+TGG - chr6_3:18001343-18001362 None:intergenic 50.0%
ATGCAGTGGGAGTTGTTAGC+AGG + chr6_3:18001342-18001361 Msa0942700:CDS 50.0%
AGTGGGAGATTGTTGTGTGC+AGG + chr6_3:18001475-18001494 Msa0942700:intron 50.0%
!! CATGACAAGAGTTGGTGGCA+AGG + chr6_3:18001593-18001612 Msa0942700:intron 50.0%
AAAGATCTGCAGCAGCAGTC+CGG + chr6_3:18001887-18001906 Msa0942700:intron 50.0%
GTCCGGAGAGTAGGCATTAT+TGG + chr6_3:18001904-18001923 Msa0942700:intron 50.0%
GGCCAATAATGCCTACTCTC+CGG - chr6_3:18001909-18001928 None:intergenic 50.0%
!! TATAGCAGTTTTGGCCCCCA+AGG + chr6_3:18003250-18003269 Msa0942700:intron 50.0%
TAACACGTGGCACCTCACTT+AGG + chr6_3:18003290-18003309 Msa0942700:intron 50.0%
AACACGTGGCACCTCACTTA+GGG + chr6_3:18003291-18003310 Msa0942700:intron 50.0%
! GACCGAGTCAAAATTGGCCT+TGG + chr6_3:18003329-18003348 Msa0942700:intron 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG - chr6_3:18003334-18003353 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG + chr6_3:18003331-18003350 Msa0942700:intron 50.0%
!! CGAGTCAAAATTGGCCTTGG+GGG + chr6_3:18003332-18003351 Msa0942700:intron 50.0%
AGGGGCCAAAATCCCAACTT+TGG + chr6_3:18003409-18003428 Msa0942700:intron 50.0%
ATGTATGAAAGCAACCCGCC+AGG + chr6_3:18003598-18003617 Msa0942700:intron 50.0%
TGAACATCCTTAGGGATGGG+TGG + chr6_3:18003928-18003947 Msa0942700:intron 50.0%
! TCCTTAGGGATGGGTGGATT+CGG + chr6_3:18003934-18003953 Msa0942700:intron 50.0%
! GTTTCATGGACTGTCGCAAC+CGG + chr6_3:18004128-18004147 Msa0942700:CDS 50.0%
GTGACAACGACTCTAGATGC+CGG + chr6_3:18004514-18004533 Msa0942700:CDS 50.0%
ACGACTCTAGATGCCGGTAA+CGG + chr6_3:18004520-18004539 Msa0942700:CDS 50.0%
AGCCTTCATAAGACCAGCGG+TGG - chr6_3:17998276-17998295 None:intergenic 55.0%
! GATGACAGAAGGCGCATCAG+TGG + chr6_3:17998367-17998386 Msa0942700:CDS 55.0%
CACAGCTGTGAGTAGCTCCT+CGG + chr6_3:17998514-17998533 Msa0942700:CDS 55.0%
ACAGCTGTGAGTAGCTCCTC+GGG + chr6_3:17998515-17998534 Msa0942700:CDS 55.0%
AGAGATCCGACGGAGAGAGT+TGG + chr6_3:17998586-17998605 Msa0942700:CDS 55.0%
GAGATCCGACGGAGAGAGTT+GGG + chr6_3:17998587-17998606 Msa0942700:CDS 55.0%
! TTCGTCAGCCAACTGGCCTA+CGG - chr6_3:17999110-17999129 None:intergenic 55.0%
TGTAGCCTTCGTCAGCCAAC+TGG - chr6_3:17999117-17999136 None:intergenic 55.0%
GGTGCAATGACGATAGCTCG+CGG + chr6_3:17999175-17999194 Msa0942700:CDS 55.0%
!! CCATTGTGTTGGGGAGTACC+TGG - chr6_3:17999736-17999755 None:intergenic 55.0%
CCAGGTACTCCCCAACACAA+TGG + chr6_3:17999733-17999752 Msa0942700:CDS 55.0%
TGACTGCACACGCAAGCTTC+TGG - chr6_3:17999797-17999816 None:intergenic 55.0%
AGAAGCTTGCGTGTGCAGTC+AGG + chr6_3:17999796-17999815 Msa0942700:CDS 55.0%
! TTGTGCTCCAATGGCACCGA+TGG - chr6_3:17999883-17999902 None:intergenic 55.0%
ATGAGTTTGGCTACCGCCTC+TGG + chr6_3:18000052-18000071 Msa0942700:CDS 55.0%
TGAGTTTGGCTACCGCCTCT+GGG + chr6_3:18000053-18000072 Msa0942700:CDS 55.0%
! GGATGCACTGGTGTGTCAGA+CGG - chr6_3:18000276-18000295 None:intergenic 55.0%
CTCCCACTTACTAGCATCCG+TGG - chr6_3:18000418-18000437 None:intergenic 55.0%
CAACATGGGCGATGCCAAAC+CGG + chr6_3:18001169-18001188 Msa0942700:CDS 55.0%
CAACGGTGTGCTAACCGGTT+TGG - chr6_3:18001186-18001205 None:intergenic 55.0%
CAAACCGGTTAGCACACCGT+TGG + chr6_3:18001184-18001203 Msa0942700:CDS 55.0%
CTTGCCAACGGTGTGCTAAC+CGG - chr6_3:18001191-18001210 None:intergenic 55.0%
TGTACGCGATGGTCTGTACG+AGG + chr6_3:18001306-18001325 Msa0942700:CDS 55.0%
GTCTGTACGAGGCCAGACAT+TGG + chr6_3:18001317-18001336 Msa0942700:CDS 55.0%
CCAGACATTGGCCATGCAGT+GGG + chr6_3:18001329-18001348 Msa0942700:CDS 55.0%
GATCATGCAGCAGCCTTCTC+TGG - chr6_3:18001423-18001442 None:intergenic 55.0%
AGAAGGCTGCTGCATGATCG+AGG + chr6_3:18001424-18001443 Msa0942700:intron 55.0%
TAGCCATCCCACGTGCATGT+GGG - chr6_3:18001502-18001521 None:intergenic 55.0%
TTAGCCATCCCACGTGCATG+TGG - chr6_3:18001503-18001522 None:intergenic 55.0%
!! CAAGAGTTGGTGGCAAGGGT+TGG + chr6_3:18001598-18001617 Msa0942700:intron 55.0%
!! TGTGGCAATTTTGGCCCCCA+AGG - chr6_3:18003349-18003368 None:intergenic 55.0%
TTTGCATGTGTGGTCCTGGC+GGG - chr6_3:18003615-18003634 None:intergenic 55.0%
CTTTGCATGTGTGGTCCTGG+CGG - chr6_3:18003616-18003635 None:intergenic 55.0%
ACCGAATCCACCCATCCCTA+AGG - chr6_3:18003938-18003957 None:intergenic 55.0%
! AAGTGGCGGAGTTGCTGCAT+TGG - chr6_3:18004249-18004268 None:intergenic 55.0%
AATGCAGCAACTCCGCCACT+TGG + chr6_3:18004248-18004267 Msa0942700:intron 55.0%
GTTGCTTCCACCTCAGGAGG+AGG + chr6_3:17998833-17998852 Msa0942700:CDS 60.0%
GTAGGCCAGTTGGCTGACGA+AGG + chr6_3:17999109-17999128 Msa0942700:CDS 60.0%
CTACGAGCACGGGATCCGAA+TGG + chr6_3:17999699-17999718 Msa0942700:CDS 60.0%
!! CCAATGGCACCGATGGACCT+CGG - chr6_3:17999876-17999895 None:intergenic 60.0%
GCCAGACATTGGCCATGCAG+TGG + chr6_3:18001328-18001347 Msa0942700:CDS 60.0%
CCCACTGCATGGCCAATGTC+TGG - chr6_3:18001332-18001351 None:intergenic 60.0%
TGCAGGACCCACATGCACGT+GGG + chr6_3:18001492-18001511 Msa0942700:intron 60.0%
CTGACGTGGCACCCTAAGTG+AGG - chr6_3:18003305-18003324 None:intergenic 60.0%
!! TGACTCGGTCTACGCTGACG+TGG - chr6_3:18003319-18003338 None:intergenic 60.0%
! TCATGGACTGTCGCAACCGG+AGG + chr6_3:18004131-18004150 Msa0942700:CDS 60.0%
CAACGCGTCACCTCCTCCTG+AGG - chr6_3:17998846-17998865 None:intergenic 65.0%
!! CCGAGGTCCATCGGTGCCAT+TGG + chr6_3:17999873-17999892 Msa0942700:CDS 65.0%
GTGCAGGACCCACATGCACG+TGG + chr6_3:18001491-18001510 Msa0942700:intron 65.0%
GGACCCACATGCACGTGGGA+TGG + chr6_3:18001496-18001515 Msa0942700:intron 65.0%
GCAGCAGCAGTCCGGAGAGT+AGG + chr6_3:18001895-18001914 Msa0942700:intron 65.0%
! TCCATCTCGGGCGCCGTTAC+CGG - chr6_3:18004536-18004555 None:intergenic 65.0%
CGCGTCACCTCCTCCTGAGG+TGG - chr6_3:17998843-17998862 None:intergenic 70.0%
! GCCGGTAACGGCGCCCGAGA+TGG + chr6_3:18004532-18004551 Msa0942700:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 17998038 18004561 17998038 ID=Msa0942700;Name=Msa0942700
chr6_3 mRNA 17998038 18004561 17998038 ID=Msa0942700-mRNA-1;Parent=Msa0942700;Name=Msa0942700-mRNA-1;_AED=0.79;_eAED=0.79;_QI=0|0|0|0.5|1|1|4|0|1252
chr6_3 exon 17998038 18001397 17998038 ID=Msa0942700-mRNA-1:exon:5381;Parent=Msa0942700-mRNA-1
chr6_3 exon 18001497 18001583 18001497 ID=Msa0942700-mRNA-1:exon:5382;Parent=Msa0942700-mRNA-1
chr6_3 exon 18004080 18004238 18004080 ID=Msa0942700-mRNA-1:exon:5383;Parent=Msa0942700-mRNA-1
chr6_3 exon 18004409 18004561 18004409 ID=Msa0942700-mRNA-1:exon:5384;Parent=Msa0942700-mRNA-1
chr6_3 CDS 17998038 18001397 17998038 ID=Msa0942700-mRNA-1:cds;Parent=Msa0942700-mRNA-1
chr6_3 CDS 18001497 18001583 18001497 ID=Msa0942700-mRNA-1:cds;Parent=Msa0942700-mRNA-1
chr6_3 CDS 18004080 18004238 18004080 ID=Msa0942700-mRNA-1:cds;Parent=Msa0942700-mRNA-1
chr6_3 CDS 18004409 18004561 18004409 ID=Msa0942700-mRNA-1:cds;Parent=Msa0942700-mRNA-1
Gene Sequence

>Msa0942700

ATGGCTGCAGACGAAGGAAAGGTGAAAATTGAAAAGTTCGATGGTGCGGACTTTGGCTTTTGGAAGATGCAGATCGAAGATTATTTGTATCAGAAAAAGCTACATCAACCTCTCACAGAAAAGAAACCAGAATCGATGAAGGATGATGAGTGGAACCTTCTCGATAGACAAGCACTTGGTGTTGTGCGATTGTCGTTATCTCGAAATGTTGCTTTTAACATAGCAAAAGAGAAAACCACCGCTGGTCTTATGAAGGCTCTTTCTAGCATGTATGAAAAGCCTTCAGCATCAAATAAAGTTCATTTGATGAGGCGGTTGTTTACACTTCGGATGACAGAAGGCGCATCAGTGGCGCAACATATCAATGAACTTAATATTGTCACAACCCAATTAAGTTCAGTTGGTATCGAATTTGACGATGAGGTACGAGCATTGATACTTTTGTCTTCCCTACCAGATAGTTGGAGCGCTACTGTCACAGCTGTGAGTAGCTCCTCGGGAAGCATAAAGATGAAATTTGATGATGTTCGTGATCTGGTTCTCAGTGAAGAGATCCGACGGAGAGAGTTGGGTGAATCGTCATCCTCTTCAGTATTGCATACAGAGTCAAGAGGAAGAAATTCAACCAGAGGAAATGGACGTGGTAAATCAAAGGCCAGACGATCCAAATTCAGAAATCATCGTAGTTCTCAGAACTCGAAATCTATCGAGTGTTGGAATTGTGGAAAGACGGGACACTTCAAAAATCAGTGTAGGCTCCCAGCAAAGAATCAAGAGGCGAAAGATGAGGCAAATGTTGCTTCCACCTCAGGAGGAGGTGACGCGTTGATATGTTCTTTGGAGAGCAAGGAAGAGTCTTGGGTGTTAGACTCTGGAGCGTCTTTTCATGCCACTTCCCAGAAAGAATTGTTCAAGAATTATGTCCCTGGTAACCTTGGTAAAGTTTACCTTGGAAATGAACAATCATGTAAGGTTGTGGGCAAAGGTGAAGTTAAGATTAAGTTGAATGGGTCTGTATGGGAATTGAAAAATGTCAGACATATTCCCGACCTCACGAAAAACTTAATCTCCGTAGGCCAGTTGGCTGACGAAGGCTACACAACAGTCTTCCACGGTGATGATTGGAAGATTTCAAAAGGTGCAATGACGATAGCTCGCGGTAGAAAGAGTGGTACTCTTTACAAGACAGCTGGAGCATGCCATTTGATTGCAGTTGCAACAAATGAAAATCCCAATCTATGGCACAAGAGATTAGGCCATATGAGTGAAAAGGGGATGAAGGTTATGCACTCAAAAGGAAAACTACCAAGTCTTCGGTCAATAGAAATTGACATATGTGAAGACTGTATACTTGGAAAGCAGAAGAGAGTCAGCTTTCAGACAAGTGGAAGAACCCCAAAGAAGGAGAAACTTGAGCTTGTTCACTCCGATGTTTGGGGTCCAACAACAGTCCCATCCATTGGTGGGAAGCATTACTTCGTGACTTTTATCGATGATCACTCTAGGAAGGTATGGGTATACTTTCTGAAGCATAAGTCTGAAGTATTTGAAGTTTTCAAGAGATGGAAAGCCATGGTGGAAAATGAGACAAGTTTGAAGATCAAAAAGCTCAGAACCGACAATGGTGGTGAATATGAAGACACCAAATTCAAGAAGTTTTGCTACGAGCACGGGATCCGAATGGAAAGAACTGTGCCAGGTACTCCCCAACACAATGGTGTAGCTGAGCGTATGAATAGAACATTGACTGAGAGAGCCAGAAGCTTGCGTGTGCAGTCAGGCTTACCAAAGAACTTCTGGGCAGAAGCAGTCAACACATCAGCCTACTTAATCAACCGAGGTCCATCGGTGCCATTGGAGCACAAAATACCAGAAGAGGTATGGAGTGGAAAAGAGGTAAAACTCTCACATCTTAGAGTTTTTGGCTGTGTAGCATATGTGCACATTAGTGATCAAGGTAGAAATAAACTTGATCCCAAATCCAAGAAGTGCACTTTCATCGGTTATGGTGAAGATGAGTTTGGCTACCGCCTCTGGGATGATGAAAACAAAAAGATGGTTCGCAGTAGAGATGTGATCTTCAATGAAAGAGTGATGTACAAAGACAGGCATAACACAACCACCAATGACTCAGGATTGAGCGAGCCTGTTTATGTAGAGATGGATGATGTTCCAGGAAGTCCCACAGATGAGATTCCCCAATCAGAGGAATTGGCAGAATCAAGCATCAGACAACCGTCTGACACACCAGTGCATCCTACTTCAGTTCCTGAATTAAGAAGGTCTTCTAGACTTCGTTTTTCAAACAAAAGATACATAGACTACATGTTGTTAACTGATGGAGGAGAGCCTGAAGATTATGATGAAGCATGTCAGACCACGGATGCTAGTAAGTGGGAGCTTGCCATGAAAGACGAAATGAAGTCTTTGATCTCAAATCAGACATGGGAACTAGCTAAGTTACCCATGGGAAAGAAGGCACTTCACAACAAATGGGTGTATCGAGTAAAGGAGGACCATGATGGCTCTAAGAGATACAAAGCCCGACTAGTGGTCAAAGGATTCCAGCAGAAAGAAGGAATTGACTACACCGAGATTTTTGCTCCAGTGGTGAAGCTCAATACTATCAGGTCTGTCTTAAGTATTGTTGCCATCGAAAATCTCTATCTTGAGCAGTTAGATGTGAAGACTGCATTTCTTCATGGAGACTTAAATGAGGAGATATACATGCACCAACCAGAAGGATTCTCAGAAAAAGGAAAAGAGAATATGGTGTGCAGGTTAAAGAAAAGCTTGTATGGCCTGAAACAAGCTCCAAGGCAGTGGTATATGAAGTTTGAAAACTTCATGCACAAGGAAGGTTTCCAGAAGTGCAATGCCGACCATTGTTGCTTCTTCAAGAGATATAAGTCAAGTTATATCATTTTGCTACTTTATGTTGATGATATGTTAGTAGCAGGCTCAGACATTGATGAGATCAAAAACTTGAAGATGCAATTGTCAAAAGAATTTGACATGAAGGATTTAGGTCCGGCAAAGAAAATTCTTGGAATGCAAATCACGAGAGATAAGCAAAAAGGAGTTTTGCAGTTATCTCAAGCAGAGTACATCAACCGTGTTTTGCAAAGATTCAACATGGGCGATGCCAAACCGGTTAGCACACCGTTGGCAAGTCATTTTCGCCTATCTCAAGAACAATCACCTCAGACGGAGGAAGAAAAAGAACTCATGGCTAAGATTCCATATGCTTCGGCAATTGGAAGTTTGATGTACGCGATGGTCTGTACGAGGCCAGACATTGGCCATGCAGTGGGAGTTGTTAGCAGGTTTATAGACAAACTGAAGTTATGGTCAACTTCAGACCCACATGCACGTGGGATGGCTAAACAATTTGCTGAAGCAAATTGTTACACAAACTCTTGTGTAGGGAAAAGCACAGCCTGCCAAGAACACACAAAGCACCATTTTCTTTTCATTCATATATGCTTTCGTGATGTTTCATGGACTGTCGCAACCGGAGGAAAACTCTCTCCTCATGAGGTGTTCTCTAATGCATTTACTCTTTTGCTTAGATTTTGCCGGTTTGATCGTTTACCCATTGAACAATCAAAGCTTTTGGTTCAAAACAAACACAATCACTCACCAAAATCCATGTCAAACAAACTTTGGTTTGGTTCAGTCTCCTCACAAAATCACCATGTTTTGGAGCTGGTGACAACGACTCTAGATGCCGGTAACGGCGCCCGAGATGGAATTTAG
Protein sequence

>Msa0942700

MAADEGKVKIEKFDGADFGFWKMQIEDYLYQKKLHQPLTEKKPESMKDDEWNLLDRQALGVVRLSLSRNVAFNIAKEKTTAGLMKALSSMYEKPSASNKVHLMRRLFTLRMTEGASVAQHINELNIVTTQLSSVGIEFDDEVRALILLSSLPDSWSATVTAVSSSSGSIKMKFDDVRDLVLSEEIRRRELGESSSSSVLHTESRGRNSTRGNGRGKSKARRSKFRNHRSSQNSKSIECWNCGKTGHFKNQCRLPAKNQEAKDEANVASTSGGGDALICSLESKEESWVLDSGASFHATSQKELFKNYVPGNLGKVYLGNEQSCKVVGKGEVKIKLNGSVWELKNVRHIPDLTKNLISVGQLADEGYTTVFHGDDWKISKGAMTIARGRKSGTLYKTAGACHLIAVATNENPNLWHKRLGHMSEKGMKVMHSKGKLPSLRSIEIDICEDCILGKQKRVSFQTSGRTPKKEKLELVHSDVWGPTTVPSIGGKHYFVTFIDDHSRKVWVYFLKHKSEVFEVFKRWKAMVENETSLKIKKLRTDNGGEYEDTKFKKFCYEHGIRMERTVPGTPQHNGVAERMNRTLTERARSLRVQSGLPKNFWAEAVNTSAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQGRNKLDPKSKKCTFIGYGEDEFGYRLWDDENKKMVRSRDVIFNERVMYKDRHNTTTNDSGLSEPVYVEMDDVPGSPTDEIPQSEELAESSIRQPSDTPVHPTSVPELRRSSRLRFSNKRYIDYMLLTDGGEPEDYDEACQTTDASKWELAMKDEMKSLISNQTWELAKLPMGKKALHNKWVYRVKEDHDGSKRYKARLVVKGFQQKEGIDYTEIFAPVVKLNTIRSVLSIVAIENLYLEQLDVKTAFLHGDLNEEIYMHQPEGFSEKGKENMVCRLKKSLYGLKQAPRQWYMKFENFMHKEGFQKCNADHCCFFKRYKSSYIILLLYVDDMLVAGSDIDEIKNLKMQLSKEFDMKDLGPAKKILGMQITRDKQKGVLQLSQAEYINRVLQRFNMGDAKPVSTPLASHFRLSQEQSPQTEEEKELMAKIPYASAIGSLMYAMVCTRPDIGHAVGVVSRFIDKLKLWSTSDPHARGMAKQFAEANCYTNSCVGKSTACQEHTKHHFLFIHICFRDVSWTVATGGKLSPHEVFSNAFTLLLRFCRFDRLPIEQSKLLVQNKHNHSPKSMSNKLWFGSVSSQNHHVLELVTTTLDAGNGARDGI*