AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1209860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209860 MtrunA17_Chr4g0059061 96.405 306 9 1 1 306 1 304 0.0 608
Msa1209860 MtrunA17_Chr3g0117631 48.852 305 139 5 13 306 15 313 1.04e-96 290
Msa1209860 MtrunA17_Chr8g0380321 37.594 266 152 6 43 299 19 279 4.07e-53 177
Msa1209860 MtrunA17_Chr1g0210871 31.894 301 158 9 46 306 273 566 1.03e-40 150
Msa1209860 MtrunA17_Chr5g0412301 31.229 301 159 9 46 305 266 559 4.57e-36 137
Msa1209860 MtrunA17_Chr5g0410781 35.294 187 106 6 43 220 59 239 6.03e-30 115
Msa1209860 MtrunA17_Chr7g0217951 34.946 186 102 7 46 220 249 426 4.10e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209860 AT5G62520.1 41.975 243 122 6 68 301 70 302 2.50e-54 181
Msa1209860 AT1G23550.1 37.407 270 150 5 48 305 56 318 9.64e-54 179
Msa1209860 AT3G47720.1 40.891 247 124 6 68 305 78 311 1.84e-51 173
Msa1209860 AT1G70440.2 31.908 304 174 9 15 303 19 304 2.17e-44 155
Msa1209860 AT1G70440.1 31.908 304 174 9 15 303 19 304 2.17e-44 155
Msa1209860 AT1G32230.1 30.702 342 179 10 11 303 235 567 1.71e-39 147
Msa1209860 AT1G32230.3 30.205 341 181 9 11 303 235 566 6.22e-39 145
Msa1209860 AT1G32230.6 30.205 341 181 9 11 303 235 566 9.51e-39 145
Msa1209860 AT1G32230.4 30.205 341 181 9 11 303 235 566 9.51e-39 145
Msa1209860 AT1G32230.2 30.205 341 181 9 11 303 235 566 9.51e-39 145
Msa1209860 AT1G32230.5 30.205 341 181 9 11 303 235 566 9.51e-39 145
Msa1209860 AT5G62520.2 41.975 162 82 5 68 220 70 228 1.01e-32 122
Msa1209860 AT2G35510.1 27.476 313 178 9 38 307 262 568 8.85e-29 117
Msa1209860 AT2G35510.3 27.476 313 178 9 38 307 262 568 8.85e-29 117
Msa1209860 AT2G35510.2 30.526 190 121 5 38 222 262 445 1.21e-23 101

Find 85 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAATCCATAGCCCTTT+TGG 0.255696 8_1:-68494357 None:intergenic
TTGAAACTCATAACATATTC+AGG 0.280626 8_1:-68491161 None:intergenic
GATATTATTCAACACGGTTT+TGG 0.293672 8_1:+68490716 Msa1209860:CDS
ACTCCAAACAATGAACTCTT+TGG 0.300883 8_1:-68491114 None:intergenic
AAACGAATCTGCTTCGGATT+AGG 0.308031 8_1:-68490505 None:intergenic
TCGTGTGATCATGGGAAAAT+TGG 0.321394 8_1:+68491013 Msa1209860:CDS
CCAAGTTTCACAAGGAGTAT+AGG 0.324583 8_1:+68491411 Msa1209860:CDS
CTCCCAAAGAGTTCATTGTT+TGG 0.353473 8_1:+68491111 Msa1209860:CDS
AGAGTCGGGAATTGCATAAA+AGG 0.360107 8_1:-68491338 None:intergenic
CAAGTTTCACAAGGAGTATA+GGG 0.369249 8_1:+68491412 Msa1209860:CDS
CCTATACTCCTTGTGAAACT+TGG 0.373522 8_1:-68491411 None:intergenic
AGTTCAGAAGAATATGATTC+TGG 0.386842 8_1:+68491071 Msa1209860:CDS
CAAGTACACAATACCTTTGT+CGG 0.414967 8_1:-68491192 None:intergenic
CTCCAAACAATGAACTCTTT+GGG 0.417033 8_1:-68491113 None:intergenic
TCGTCTTCCGAACTATCCTT+CGG 0.427547 8_1:-68490463 None:intergenic
CTTTCAAGTGGAGAATCGTT+TGG 0.428078 8_1:-68490770 None:intergenic
TGTTTCGGTAAATTGTAGAT+TGG 0.431614 8_1:-68490371 None:intergenic
TTTGTAGGACATGAGAAGGT+TGG 0.436670 8_1:+68491284 Msa1209860:intron
AACCACAAACGAATCTGCTT+CGG 0.446185 8_1:-68490511 None:intergenic
TCGCCGGCGGAATCATGTTT+CGG 0.448520 8_1:-68490386 None:intergenic
CGTCTTCCGAACTATCCTTC+GGG 0.448830 8_1:-68490462 None:intergenic
TTGAGTAGCAAGAAAGTTGA+TGG 0.453663 8_1:+68494302 Msa1209860:CDS
TTTGGTTATGTTCATAGCAA+TGG 0.454047 8_1:+68490734 Msa1209860:CDS
CTGAAAATCGCTACTCCATA+GGG 0.455210 8_1:-68490554 None:intergenic
GTGTAGAGGGGTGGCAAGAT+TGG 0.457360 8_1:+68494260 Msa1209860:intron
GTTGCTTTGTCGTGTGATCA+TGG 0.459584 8_1:+68491004 Msa1209860:CDS
CCTGAAAATCGCTACTCCAT+AGG 0.467324 8_1:-68490555 None:intergenic
CATGAGAAGGTTGGAGTTGG+AGG 0.468737 8_1:+68491293 Msa1209860:CDS
TTTCAGGAATCCTTGTAAAA+CGG 0.475306 8_1:+68490571 Msa1209860:CDS
ATCCGAAGCAGATTCGTTTG+TGG 0.477453 8_1:+68490509 Msa1209860:CDS
TAATCATTGCATTCGACTCA+TGG 0.479073 8_1:-68494375 None:intergenic
GGACATGAGAAGGTTGGAGT+TGG 0.482722 8_1:+68491290 Msa1209860:intron
AAATTGGAGGCTGTGCCTGC+AGG 0.495226 8_1:+68491029 Msa1209860:CDS
ACGATTCCCGAAGGATAGTT+CGG 0.498656 8_1:+68490456 Msa1209860:CDS
ATCAAGAGTAAGACCCAAAA+GGG 0.501995 8_1:+68494343 Msa1209860:CDS
CATCAAGAGTAAGACCCAAA+AGG 0.503977 8_1:+68494342 Msa1209860:CDS
GGATGCGACACTCTCGCAAT+CGG 0.504460 8_1:-68490426 None:intergenic
TTCAAACTTGCTTCCGACAA+AGG 0.516614 8_1:+68491179 Msa1209860:CDS
AGTAAGACCCAAAAGGGCTA+TGG 0.516837 8_1:+68494349 Msa1209860:CDS
GCGCAAGGGTTGAAACCCTA+TGG 0.518787 8_1:+68490539 Msa1209860:CDS
GAATCCTTGTAAAACGGTAA+TGG 0.521351 8_1:+68490577 Msa1209860:CDS
CCTTCGGGAATCGTGGCCGC+CGG 0.528283 8_1:-68490447 None:intergenic
TAGAGGGGTGGCAAGATTGG+CGG 0.529568 8_1:+68494263 Msa1209860:intron
TATCAAATCTTTCAGAGCAA+AGG 0.540517 8_1:+68491610 Msa1209860:CDS
CTCCTTGTGAAACTTGGCAA+TGG 0.542921 8_1:-68491405 None:intergenic
CAAACGATTCTCCACTTGAA+AGG 0.543450 8_1:+68490771 Msa1209860:CDS
TTGCTTTGTCGTGTGATCAT+GGG 0.546121 8_1:+68491005 Msa1209860:CDS
GATTGCGAGAGTGTCGCATC+CGG 0.547181 8_1:+68490428 Msa1209860:CDS
AGAACTGTTGTTGACGAACA+AGG 0.547451 8_1:+68490969 Msa1209860:CDS
AAAGCGCAGAAATCAGAGTC+GGG 0.547882 8_1:-68491352 None:intergenic
ATTAACTCGTGCCTTTCAAG+TGG 0.549624 8_1:-68490782 None:intergenic
GTTTGTGGTTTAAGTGCGCA+AGG 0.554303 8_1:+68490524 Msa1209860:CDS
GCAAGATTGGCGGCGTGAAG+AGG 0.556892 8_1:+68494273 Msa1209860:CDS
AATCGCTGATTCATCTTCGC+CGG 0.558062 8_1:-68490402 None:intergenic
AGATTGGCGGCGTGAAGAGG+AGG 0.558782 8_1:+68494276 Msa1209860:CDS
AATTGCATAAAAGGCGAAGA+CGG 0.562424 8_1:-68491329 None:intergenic
GCAATGGAAACAATATCAGA+TGG 0.571537 8_1:-68491389 None:intergenic
GAATCATATTCTTCTGAACT+CGG 0.573273 8_1:-68491068 None:intergenic
CTGCGTTGATCAGAACCTGC+AGG 0.581877 8_1:-68491044 None:intergenic
CGCTGATTCATCTTCGCCGG+CGG 0.587670 8_1:-68490399 None:intergenic
TGTGATCATGGGAAAATTGG+AGG 0.591354 8_1:+68491016 Msa1209860:CDS
CGGTGGCTAAAATGCGCGGT+GGG 0.591716 8_1:+68490639 Msa1209860:CDS
TGCGAGAGTGTCGCATCCGG+CGG 0.593829 8_1:+68490431 Msa1209860:CDS
TTCCATTGCCAAGTTTCACA+AGG 0.602302 8_1:+68491403 Msa1209860:CDS
TTTGTGGTTTAAGTGCGCAA+GGG 0.604517 8_1:+68490525 Msa1209860:CDS
ATGAGAAGGTTGGAGTTGGA+GGG 0.604737 8_1:+68491294 Msa1209860:CDS
TTACCGAAACATGATTCCGC+CGG 0.606830 8_1:+68490383 Msa1209860:CDS
TGAGATCTTCGCACGTGCGG+TGG 0.607606 8_1:+68490622 Msa1209860:CDS
CCGGCGGCCACGATTCCCGA+AGG 0.617069 8_1:+68490447 Msa1209860:CDS
ATAGTTCGGAAGACGACGGA+GGG 0.618356 8_1:+68490470 Msa1209860:CDS
GATTGGCGGCGTGAAGAGGA+GGG 0.619432 8_1:+68494277 Msa1209860:CDS
CGTGCGGTGGCTAAAATGCG+CGG 0.622389 8_1:+68490635 Msa1209860:CDS
GAAAGCGCAGAAATCAGAGT+CGG 0.626070 8_1:-68491353 None:intergenic
GAACTATCCTTCGGGAATCG+TGG 0.630182 8_1:-68490454 None:intergenic
GATAGTTCGGAAGACGACGG+AGG 0.630672 8_1:+68490469 Msa1209860:CDS
AATGTGAAACACGTGTGGTA+CGG 0.653048 8_1:+68490668 Msa1209860:CDS
GTTTGAGATCTTCGCACGTG+CGG 0.658246 8_1:+68490619 Msa1209860:CDS
AAACGGTAATGGCACAAGCG+AGG 0.659734 8_1:+68490588 Msa1209860:CDS
GCGGTGGCTAAAATGCGCGG+TGG 0.662286 8_1:+68490638 Msa1209860:CDS
AGAAGAATATGATTCTGGAG+TGG 0.669225 8_1:+68491076 Msa1209860:CDS
ATGGAAACAATATCAGATGG+AGG 0.669944 8_1:-68491386 None:intergenic
ATTGTTGATATTATTCAACA+CGG 0.694317 8_1:+68490710 Msa1209860:CDS
ATTGAAACTGTGTAGAGGGG+TGG 0.704912 8_1:+68494251 Msa1209860:intron
AAGGATAGTTCGGAAGACGA+CGG 0.711418 8_1:+68490466 Msa1209860:CDS
ATGCTAATGTGAAACACGTG+TGG 0.770185 8_1:+68490663 Msa1209860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATGCTAAATAAAATTT+TGG + chr8_1:68491735-68491754 Msa1209860:intron 10.0%
!!! ATAATGCTAAATAAAATTTT+GGG + chr8_1:68491736-68491755 Msa1209860:intron 10.0%
!! AATTGAAATAAAAAACAAAA+GGG - chr8_1:68492075-68492094 None:intergenic 10.0%
!! AAATTGAAATAAAAAACAAA+AGG - chr8_1:68492076-68492095 None:intergenic 10.0%
!!! ATTTCAATTTTTCAATTAAA+TGG + chr8_1:68492086-68492105 Msa1209860:intron 10.0%
!!! ATTTATTTTTTGTTTTGTTT+GGG + chr8_1:68493636-68493655 Msa1209860:intron 10.0%
!! ATTGTATTAACTTTACTTAA+TGG + chr8_1:68490840-68490859 Msa1209860:intron 15.0%
!! TTACATTTCAATAGAATTTA+GGG - chr8_1:68491778-68491797 None:intergenic 15.0%
!!! TCTAATTTTCTCAAATATTT+AGG + chr8_1:68492038-68492057 Msa1209860:intron 15.0%
!! ATTGAAATAAAAAACAAAAG+GGG - chr8_1:68492074-68492093 None:intergenic 15.0%
!!! TTTTATCATTATAATGAACT+GGG + chr8_1:68493053-68493072 Msa1209860:intron 15.0%
!! TTTCTTTAGTATTTATTGTA+TGG - chr8_1:68493533-68493552 None:intergenic 15.0%
!!! CATTTATTTTTTGTTTTGTT+TGG + chr8_1:68493635-68493654 Msa1209860:intron 15.0%
!! ATTGTTGATATTATTCAACA+CGG + chr8_1:68490710-68490729 Msa1209860:CDS 20.0%
!! ATTAACTTTACTTAATGGTT+AGG + chr8_1:68490845-68490864 Msa1209860:intron 20.0%
!! TTAACTTTACTTAATGGTTA+GGG + chr8_1:68490846-68490865 Msa1209860:intron 20.0%
!!! TTTGTTGTGTTTTTGTTATT+AGG + chr8_1:68491231-68491250 Msa1209860:intron 20.0%
!!! TTGTTGTGTTTTTGTTATTA+GGG + chr8_1:68491232-68491251 Msa1209860:intron 20.0%
!!! GTTTCAGATTATTTTTTGTT+TGG + chr8_1:68491260-68491279 Msa1209860:intron 20.0%
!!! TATTTTTTGTTTGGTTTTGT+AGG + chr8_1:68491269-68491288 Msa1209860:intron 20.0%
!! TACATTTCAATAGAATTTAG+GGG - chr8_1:68491777-68491796 None:intergenic 20.0%
!! GTTACATTTCAATAGAATTT+AGG - chr8_1:68491779-68491798 None:intergenic 20.0%
!! TGCTCATTGAAAAAATAAAT+GGG - chr8_1:68491808-68491827 None:intergenic 20.0%
!!! TAGAAAAGTTGATAAAATTG+AGG + chr8_1:68492256-68492275 Msa1209860:intron 20.0%
!! TCATCCTATTACATAAATAA+AGG + chr8_1:68492647-68492666 Msa1209860:intron 20.0%
!! CATCCTATTACATAAATAAA+GGG + chr8_1:68492648-68492667 Msa1209860:intron 20.0%
!! TTCTTGGAAAATTAGAAAAT+AGG + chr8_1:68492894-68492913 Msa1209860:intron 20.0%
!! ATAAAACGTATTCAAACTAT+TGG - chr8_1:68493039-68493058 None:intergenic 20.0%
!!! GTTTTATCATTATAATGAAC+TGG + chr8_1:68493052-68493071 Msa1209860:intron 20.0%
!! TAACTATAAGACAAATCAAA+TGG - chr8_1:68493262-68493281 None:intergenic 20.0%
! TTGAAACTCATAACATATTC+AGG - chr8_1:68491164-68491183 None:intergenic 25.0%
! TTCTTATCCTGTAAAACAAA+CGG - chr8_1:68491524-68491543 None:intergenic 25.0%
! GTGCTCATTGAAAAAATAAA+TGG - chr8_1:68491809-68491828 None:intergenic 25.0%
! TTTCAAAAGGAAACAATACA+GGG - chr8_1:68491934-68491953 None:intergenic 25.0%
!! TTTTCAAAAGGAAACAATAC+AGG - chr8_1:68491935-68491954 None:intergenic 25.0%
!!! ATGACTTTCAAGTTTTCAAA+AGG - chr8_1:68491947-68491966 None:intergenic 25.0%
! ATTTGAGAAAATTAGACTCT+AGG - chr8_1:68492034-68492053 None:intergenic 25.0%
!! ACACCCTTTATTTATGTAAT+AGG - chr8_1:68492654-68492673 None:intergenic 25.0%
! TTCCCAGTAAAATTAAATTG+AGG + chr8_1:68492745-68492764 Msa1209860:intron 25.0%
!!! CACCTCAATTTAATTTTACT+GGG - chr8_1:68492750-68492769 None:intergenic 25.0%
!!! TGCATATTTTTTGCTTGTTT+TGG + chr8_1:68492799-68492818 Msa1209860:intron 25.0%
!! TTCTAATTTTCCAAGAACAA+TGG - chr8_1:68492891-68492910 None:intergenic 25.0%
! ATTTCATATTTCCATGATCA+TGG - chr8_1:68492923-68492942 None:intergenic 25.0%
!! ATATTTCTTTTCTGTAGAAG+GGG - chr8_1:68493195-68493214 None:intergenic 25.0%
!! CATATTTCTTTTCTGTAGAA+GGG - chr8_1:68493196-68493215 None:intergenic 25.0%
!! TCATATTTCTTTTCTGTAGA+AGG - chr8_1:68493197-68493216 None:intergenic 25.0%
!!! GTAATCTAACGTTTTGTTTT+TGG - chr8_1:68493361-68493380 None:intergenic 25.0%
! TCATGCTTTCTAATCTAATT+AGG + chr8_1:68493429-68493448 Msa1209860:intron 25.0%
! TAAAGAAAGTGATAGAAAAC+TGG + chr8_1:68493545-68493564 Msa1209860:intron 25.0%
!!! TATTTTTTGTTTTGTTTGGG+TGG + chr8_1:68493639-68493658 Msa1209860:intron 25.0%
! GTTAATTGTACTATAGTAGA+AGG + chr8_1:68493682-68493701 Msa1209860:intron 25.0%
!!! TTTCTTTTAAGAATGCAACT+TGG - chr8_1:68493796-68493815 None:intergenic 25.0%
! TTAGTATGGAACTCATAAAT+TGG - chr8_1:68493891-68493910 None:intergenic 25.0%
! CTAGTGTAAACCTTTATTAT+TGG - chr8_1:68493986-68494005 None:intergenic 25.0%
! TAATAAAGGTTTACACTAGA+AGG + chr8_1:68493987-68494006 Msa1209860:intron 25.0%
! AATAAAGGTTTACACTAGAA+GGG + chr8_1:68493988-68494007 Msa1209860:intron 25.0%
! ATAGAGAAAATATATCCCTT+TGG - chr8_1:68494111-68494130 None:intergenic 25.0%
!!! TTTTTCGTTATGTTCTAGTT+TGG + chr8_1:68494145-68494164 Msa1209860:intron 25.0%
TGTTTCGGTAAATTGTAGAT+TGG - chr8_1:68490374-68490393 None:intergenic 30.0%
TTTCAGGAATCCTTGTAAAA+CGG + chr8_1:68490571-68490590 Msa1209860:CDS 30.0%
! GATATTATTCAACACGGTTT+TGG + chr8_1:68490716-68490735 Msa1209860:CDS 30.0%
TTTGGTTATGTTCATAGCAA+TGG + chr8_1:68490734-68490753 Msa1209860:CDS 30.0%
GAATCATATTCTTCTGAACT+CGG - chr8_1:68491071-68491090 None:intergenic 30.0%
AGTTCAGAAGAATATGATTC+TGG + chr8_1:68491071-68491090 Msa1209860:CDS 30.0%
CAAAAAGTTAGAAAAGTTGC+AGG + chr8_1:68491566-68491585 Msa1209860:CDS 30.0%
TATCAAATCTTTCAGAGCAA+AGG + chr8_1:68491610-68491629 Msa1209860:CDS 30.0%
TGTTAAGAATTTAGACATGC+TGG + chr8_1:68491673-68491692 Msa1209860:intron 30.0%
TTTCAATAGAATTTAGGGGA+GGG - chr8_1:68491773-68491792 None:intergenic 30.0%
ATTTCAATAGAATTTAGGGG+AGG - chr8_1:68491774-68491793 None:intergenic 30.0%
! TTTTCCCCCATTTAATCAAA+AGG - chr8_1:68491854-68491873 None:intergenic 30.0%
! TAGAACTCTATTCATGGTTT+TGG + chr8_1:68492143-68492162 Msa1209860:intron 30.0%
!!! TGAGGACAATTGTGTTTTTT+TGG + chr8_1:68492274-68492293 Msa1209860:intron 30.0%
!! AAATAAGGGGTGTTTCTTAT+CGG + chr8_1:68492456-68492475 Msa1209860:intron 30.0%
AGAAGAAAATGACTTCTATG+TGG + chr8_1:68492509-68492528 Msa1209860:intron 30.0%
TTTGCTAACACCGTTTATAA+CGG - chr8_1:68492613-68492632 None:intergenic 30.0%
! TATAAACGGTGTTAGCAAAA+AGG + chr8_1:68492614-68492633 Msa1209860:intron 30.0%
TCTTATTAGTGCAAAAACAG+AGG + chr8_1:68492675-68492694 Msa1209860:intron 30.0%
CTTATTAGTGCAAAAACAGA+GGG + chr8_1:68492676-68492695 Msa1209860:intron 30.0%
TTATTAGTGCAAAAACAGAG+GGG + chr8_1:68492677-68492696 Msa1209860:intron 30.0%
TTACATTTCAAGAGACTTCA+AGG + chr8_1:68492707-68492726 Msa1209860:intron 30.0%
TACATTTCAAGAGACTTCAA+GGG + chr8_1:68492708-68492727 Msa1209860:intron 30.0%
!! GCACCTCAATTTAATTTTAC+TGG - chr8_1:68492751-68492770 None:intergenic 30.0%
! AATTTTCCAAGAACAATGGA+GGG - chr8_1:68492887-68492906 None:intergenic 30.0%
! TAATTTTCCAAGAACAATGG+AGG - chr8_1:68492888-68492907 None:intergenic 30.0%
AAAATAGGAATCCATGATCA+TGG + chr8_1:68492909-68492928 Msa1209860:intron 30.0%
TTCCTACTTCTTGATTACTA+TGG + chr8_1:68492989-68493008 Msa1209860:intron 30.0%
TTCCATAGTAATCAAGAAGT+AGG - chr8_1:68492994-68493013 None:intergenic 30.0%
AATGAACTGGGAATAAGAAT+AGG + chr8_1:68493065-68493084 Msa1209860:intron 30.0%
ATGAACTGGGAATAAGAATA+GGG + chr8_1:68493066-68493085 Msa1209860:intron 30.0%
!! AGTGCTAGTTGATTTTAATG+TGG + chr8_1:68493123-68493142 Msa1209860:intron 30.0%
AGATGTTATCTACAACTTTC+TGG + chr8_1:68493319-68493338 Msa1209860:intron 30.0%
ACATGAAAAAGAAACACATG+AGG - chr8_1:68493397-68493416 None:intergenic 30.0%
TTTCAACCTCAATGTAAGTT+TGG - chr8_1:68493593-68493612 None:intergenic 30.0%
GGAATAATGTAATAGCAGAT+AGG + chr8_1:68493743-68493762 Msa1209860:intron 30.0%
ATTCGTTTACAACAATGTGT+TGG + chr8_1:68493956-68493975 Msa1209860:intron 30.0%
! TGTTGGTAGACCAATAATAA+AGG + chr8_1:68493973-68493992 Msa1209860:intron 30.0%
TTATGTTCAAGTCTTACCAA+AGG + chr8_1:68494092-68494111 Msa1209860:intron 30.0%
TATGTTCAAGTCTTACCAAA+GGG + chr8_1:68494093-68494112 Msa1209860:intron 30.0%
! ATTTAAAGCTCACTCATCTA+GGG + chr8_1:68494192-68494211 Msa1209860:intron 30.0%
GAATCCTTGTAAAACGGTAA+TGG + chr8_1:68490577-68490596 Msa1209860:CDS 35.0%
! TTGTTGACGAACAAGGTTTT+AGG + chr8_1:68490976-68490995 Msa1209860:CDS 35.0%
! AGAAGAATATGATTCTGGAG+TGG + chr8_1:68491076-68491095 Msa1209860:CDS 35.0%
CTCCAAACAATGAACTCTTT+GGG - chr8_1:68491116-68491135 None:intergenic 35.0%
ACTCCAAACAATGAACTCTT+TGG - chr8_1:68491117-68491136 None:intergenic 35.0%
CAAGTACACAATACCTTTGT+CGG - chr8_1:68491195-68491214 None:intergenic 35.0%
AATTGCATAAAAGGCGAAGA+CGG - chr8_1:68491332-68491351 None:intergenic 35.0%
ATGGAAACAATATCAGATGG+AGG - chr8_1:68491389-68491408 None:intergenic 35.0%
GCAATGGAAACAATATCAGA+TGG - chr8_1:68491392-68491411 None:intergenic 35.0%
! CAAGTTTCACAAGGAGTATA+GGG + chr8_1:68491412-68491431 Msa1209860:CDS 35.0%
!!! TGTGTTTCCGTTTGTTTTAC+AGG + chr8_1:68491514-68491533 Msa1209860:intron 35.0%
AGGTACTTCTATTCTCTCTT+TGG + chr8_1:68491630-68491649 Msa1209860:intron 35.0%
TTCAATAGAATTTAGGGGAG+GGG - chr8_1:68491772-68491791 None:intergenic 35.0%
!! TCAGCTGCCTTTTGATTAAA+TGG + chr8_1:68491844-68491863 Msa1209860:intron 35.0%
!! CAGCTGCCTTTTGATTAAAT+GGG + chr8_1:68491845-68491864 Msa1209860:intron 35.0%
!! AGCTGCCTTTTGATTAAATG+GGG + chr8_1:68491846-68491865 Msa1209860:intron 35.0%
ACCAACAAAAGCAAACTTCA+GGG - chr8_1:68491881-68491900 None:intergenic 35.0%
TCTTCGTAGAACTCTATTCA+TGG + chr8_1:68492137-68492156 Msa1209860:intron 35.0%
!!! TCATGGTTTTGGATGATGAA+TGG + chr8_1:68492154-68492173 Msa1209860:intron 35.0%
AAGATGACTTGACTTCAATG+TGG + chr8_1:68492307-68492326 Msa1209860:intron 35.0%
TCTTTCTTTATAAGCCGTGT+TGG + chr8_1:68492402-68492421 Msa1209860:intron 35.0%
TGCCACCTATTACACAAATA+AGG + chr8_1:68492441-68492460 Msa1209860:intron 35.0%
GCCACCTATTACACAAATAA+GGG + chr8_1:68492442-68492461 Msa1209860:intron 35.0%
CCACCTATTACACAAATAAG+GGG + chr8_1:68492443-68492462 Msa1209860:intron 35.0%
! ACACCCCTTATTTGTGTAAT+AGG - chr8_1:68492449-68492468 None:intergenic 35.0%
TCTTATCGGTGCAAAAATAG+AGG + chr8_1:68492470-68492489 Msa1209860:intron 35.0%
TCTGTCTCTTCCGTTATAAA+CGG + chr8_1:68492600-68492619 Msa1209860:intron 35.0%
TATTAGTGCAAAAACAGAGG+GGG + chr8_1:68492678-68492697 Msa1209860:intron 35.0%
TGTCGTCATCGAAAAAAGTA+GGG - chr8_1:68492779-68492798 None:intergenic 35.0%
ATGTCGTCATCGAAAAAAGT+AGG - chr8_1:68492780-68492799 None:intergenic 35.0%
! TGTTATAGCCTTTTCCTACT+AGG + chr8_1:68492849-68492868 Msa1209860:intron 35.0%
ATCAAGAAGTAGGAAGAACA+TGG - chr8_1:68492984-68493003 None:intergenic 35.0%
!! GCTAGTTGATTTTAATGTGG+TGG + chr8_1:68493126-68493145 Msa1209860:intron 35.0%
! TTAATGTGGTGGAAATCACA+TGG + chr8_1:68493137-68493156 Msa1209860:intron 35.0%
! CGTGCTATGGTTTCAAATTT+TGG - chr8_1:68493227-68493246 None:intergenic 35.0%
! GTTATCTACAACTTTCTGGT+AGG + chr8_1:68493323-68493342 Msa1209860:intron 35.0%
! TAAAGCTTGCATGCATTTTC+TGG - chr8_1:68493471-68493490 None:intergenic 35.0%
CACTAACCAAACTTACATTG+AGG + chr8_1:68493584-68493603 Msa1209860:intron 35.0%
GAAAACAAGCATGAGAAACA+AGG + chr8_1:68493609-68493628 Msa1209860:intron 35.0%
! TTCTAGTTAGTTACAGCTAC+TGG + chr8_1:68493718-68493737 Msa1209860:intron 35.0%
! TAGCAGATAGGCTTTTACTA+TGG + chr8_1:68493755-68493774 Msa1209860:intron 35.0%
! AGCAGATAGGCTTTTACTAT+GGG + chr8_1:68493756-68493775 Msa1209860:intron 35.0%
TGCGTTCGTTGCAAATAAAT+TGG + chr8_1:68493842-68493861 Msa1209860:intron 35.0%
TGCAAATAAATTGGAAGACC+CGG + chr8_1:68493851-68493870 Msa1209860:intron 35.0%
! GATTTAAAGCTCACTCATCT+AGG + chr8_1:68494191-68494210 Msa1209860:intron 35.0%
! TTTAAAGCTCACTCATCTAG+GGG + chr8_1:68494193-68494212 Msa1209860:intron 35.0%
TGTGTATTGAAACTGTGTAG+AGG + chr8_1:68494246-68494265 Msa1209860:intron 35.0%
GTGTATTGAAACTGTGTAGA+GGG + chr8_1:68494247-68494266 Msa1209860:intron 35.0%
TGTATTGAAACTGTGTAGAG+GGG + chr8_1:68494248-68494267 Msa1209860:intron 35.0%
TTGAGTAGCAAGAAAGTTGA+TGG + chr8_1:68494302-68494321 Msa1209860:CDS 35.0%
ATCAAGAGTAAGACCCAAAA+GGG + chr8_1:68494343-68494362 Msa1209860:CDS 35.0%
AAACGAATCTGCTTCGGATT+AGG - chr8_1:68490508-68490527 None:intergenic 40.0%
AACCACAAACGAATCTGCTT+CGG - chr8_1:68490514-68490533 None:intergenic 40.0%
TTTGTGGTTTAAGTGCGCAA+GGG + chr8_1:68490525-68490544 Msa1209860:CDS 40.0%
CTGAAAATCGCTACTCCATA+GGG - chr8_1:68490557-68490576 None:intergenic 40.0%
!! TGTGCCATTACCGTTTTACA+AGG - chr8_1:68490584-68490603 None:intergenic 40.0%
ATGCTAATGTGAAACACGTG+TGG + chr8_1:68490663-68490682 Msa1209860:CDS 40.0%
AATGTGAAACACGTGTGGTA+CGG + chr8_1:68490668-68490687 Msa1209860:CDS 40.0%
! CTTTCAAGTGGAGAATCGTT+TGG - chr8_1:68490773-68490792 None:intergenic 40.0%
CAAACGATTCTCCACTTGAA+AGG + chr8_1:68490771-68490790 Msa1209860:CDS 40.0%
ATTAACTCGTGCCTTTCAAG+TGG - chr8_1:68490785-68490804 None:intergenic 40.0%
AGAACTGTTGTTGACGAACA+AGG + chr8_1:68490969-68490988 Msa1209860:CDS 40.0%
TTGCTTTGTCGTGTGATCAT+GGG + chr8_1:68491005-68491024 Msa1209860:CDS 40.0%
TCGTGTGATCATGGGAAAAT+TGG + chr8_1:68491013-68491032 Msa1209860:CDS 40.0%
TGTGATCATGGGAAAATTGG+AGG + chr8_1:68491016-68491035 Msa1209860:CDS 40.0%
CTCCCAAAGAGTTCATTGTT+TGG + chr8_1:68491111-68491130 Msa1209860:CDS 40.0%
! TTCAAACTTGCTTCCGACAA+AGG + chr8_1:68491179-68491198 Msa1209860:CDS 40.0%
! TGTGTACTTGTGTGTTGTTG+TGG + chr8_1:68491205-68491224 Msa1209860:intron 40.0%
!!! TGGTTTTGTAGGACATGAGA+AGG + chr8_1:68491280-68491299 Msa1209860:intron 40.0%
TTTGTAGGACATGAGAAGGT+TGG + chr8_1:68491284-68491303 Msa1209860:intron 40.0%
AGAGTCGGGAATTGCATAAA+AGG - chr8_1:68491341-68491360 None:intergenic 40.0%
TTCCATTGCCAAGTTTCACA+AGG + chr8_1:68491403-68491422 Msa1209860:CDS 40.0%
CCTATACTCCTTGTGAAACT+TGG - chr8_1:68491414-68491433 None:intergenic 40.0%
! CCAAGTTTCACAAGGAGTAT+AGG + chr8_1:68491411-68491430 Msa1209860:CDS 40.0%
GGAGTATAGGGTAAGTGTTT+CGG + chr8_1:68491424-68491443 Msa1209860:intron 40.0%
!! ACTTGGTTTGACTTGGTTGT+GGG + chr8_1:68491447-68491466 Msa1209860:intron 40.0%
TCAATAGAATTTAGGGGAGG+GGG - chr8_1:68491771-68491790 None:intergenic 40.0%
!! GCTGCCTTTTGATTAAATGG+GGG + chr8_1:68491847-68491866 Msa1209860:intron 40.0%
!! ACCCTGAAGTTTGCTTTTGT+TGG + chr8_1:68491877-68491896 Msa1209860:intron 40.0%
CACCAACAAAAGCAAACTTC+AGG - chr8_1:68491882-68491901 None:intergenic 40.0%
CTATGCTTCAACGGGAAAAT+AGG - chr8_1:68491973-68491992 None:intergenic 40.0%
AAGCTCTACTATGCTTCAAC+GGG - chr8_1:68491981-68492000 None:intergenic 40.0%
GAAGCTCTACTATGCTTCAA+CGG - chr8_1:68491982-68492001 None:intergenic 40.0%
TGAAGCATAGTAGAGCTTCT+TGG + chr8_1:68491983-68492002 Msa1209860:intron 40.0%
GTCAAGTCATCTTCTTCGAT+CGG - chr8_1:68492300-68492319 None:intergenic 40.0%
TGACTTGACTTCAATGTGGT+TGG + chr8_1:68492311-68492330 Msa1209860:intron 40.0%
! TTATAAGCCGTGTTGGCAAA+AGG + chr8_1:68492409-68492428 Msa1209860:intron 40.0%
! TATAAGCCGTGTTGGCAAAA+GGG + chr8_1:68492410-68492429 Msa1209860:intron 40.0%
! CCCCTTATTTGTGTAATAGG+TGG - chr8_1:68492446-68492465 None:intergenic 40.0%
GAAAATGACTTCTATGTGGC+TGG + chr8_1:68492513-68492532 Msa1209860:intron 40.0%
ATTTCACCCTCCATTGTTCT+TGG + chr8_1:68492878-68492897 Msa1209860:intron 40.0%
CTTGATTACTATGGAAACCC+AGG + chr8_1:68492998-68493017 Msa1209860:intron 40.0%
GGAAGCTAAATAGACATCCT+GGG - chr8_1:68493018-68493037 None:intergenic 40.0%
TGGAAGCTAAATAGACATCC+TGG - chr8_1:68493019-68493038 None:intergenic 40.0%
GGGTTTGAATTGCAAATTGC+AGG + chr8_1:68493086-68493105 Msa1209860:intron 40.0%
GACGAAATCTAAACGTGCTA+TGG - chr8_1:68493240-68493259 None:intergenic 40.0%
ATAGTTCAAAGACACAGGGT+TGG - chr8_1:68493293-68493312 None:intergenic 40.0%
AACCCTGTGTCTTTGAACTA+TGG + chr8_1:68493292-68493311 Msa1209860:intron 40.0%
CTCCATAGTTCAAAGACACA+GGG - chr8_1:68493297-68493316 None:intergenic 40.0%
ACTCCATAGTTCAAAGACAC+AGG - chr8_1:68493298-68493317 None:intergenic 40.0%
!! CACATGAGGTTTTGTCAAAG+AGG - chr8_1:68493383-68493402 None:intergenic 40.0%
AGTTAGTTACAGCTACTGGT+TGG + chr8_1:68493722-68493741 Msa1209860:intron 40.0%
GCAAATAAATTGGAAGACCC+GGG + chr8_1:68493852-68493871 Msa1209860:intron 40.0%
CAAATAAATTGGAAGACCCG+GGG + chr8_1:68493853-68493872 Msa1209860:intron 40.0%
GGAAGAGGTTAGTGTTAGTA+TGG - chr8_1:68493905-68493924 None:intergenic 40.0%
TCCTTCTTCTTGCGAAGAAT+TGG + chr8_1:68493922-68493941 Msa1209860:intron 40.0%
ACCAATTCTTCGCAAGAAGA+AGG - chr8_1:68493926-68493945 None:intergenic 40.0%
TCAAACATTTCCCTACAGAC+AGG + chr8_1:68494011-68494030 Msa1209860:intron 40.0%
CAAACATTTCCCTACAGACA+GGG + chr8_1:68494012-68494031 Msa1209860:intron 40.0%
GGAAATACTGGAGTTGTGAT+AGG + chr8_1:68494033-68494052 Msa1209860:intron 40.0%
ATAGGCAACAACTCAACTCA+TGG + chr8_1:68494051-68494070 Msa1209860:intron 40.0%
TTCTCTATCAAACCAGTGTC+TGG + chr8_1:68494168-68494187 Msa1209860:intron 40.0%
TCTCTATCAAACCAGTGTCT+GGG + chr8_1:68494169-68494188 Msa1209860:intron 40.0%
TTAAAGCTCACTCATCTAGG+GGG + chr8_1:68494194-68494213 Msa1209860:intron 40.0%
CATCAAGAGTAAGACCCAAA+AGG + chr8_1:68494342-68494361 Msa1209860:CDS 40.0%
! ATGGAATCCATAGCCCTTTT+GGG - chr8_1:68494359-68494378 None:intergenic 40.0%
TTACCGAAACATGATTCCGC+CGG + chr8_1:68490383-68490402 Msa1209860:CDS 45.0%
!! AATCGCTGATTCATCTTCGC+CGG - chr8_1:68490405-68490424 None:intergenic 45.0%
ACGATTCCCGAAGGATAGTT+CGG + chr8_1:68490456-68490475 Msa1209860:CDS 45.0%
TCGTCTTCCGAACTATCCTT+CGG - chr8_1:68490466-68490485 None:intergenic 45.0%
AAGGATAGTTCGGAAGACGA+CGG + chr8_1:68490466-68490485 Msa1209860:CDS 45.0%
ATCCGAAGCAGATTCGTTTG+TGG + chr8_1:68490509-68490528 Msa1209860:CDS 45.0%
GTTTGTGGTTTAAGTGCGCA+AGG + chr8_1:68490524-68490543 Msa1209860:CDS 45.0%
CCTGAAAATCGCTACTCCAT+AGG - chr8_1:68490558-68490577 None:intergenic 45.0%
! CCTATGGAGTAGCGATTTTC+AGG + chr8_1:68490555-68490574 Msa1209860:CDS 45.0%
! GTTGCTTTGTCGTGTGATCA+TGG + chr8_1:68491004-68491023 Msa1209860:CDS 45.0%
ATGAGAAGGTTGGAGTTGGA+GGG + chr8_1:68491294-68491313 Msa1209860:CDS 45.0%
AAAGCGCAGAAATCAGAGTC+GGG - chr8_1:68491355-68491374 None:intergenic 45.0%
! GAAAGCGCAGAAATCAGAGT+CGG - chr8_1:68491356-68491375 None:intergenic 45.0%
CTCCTTGTGAAACTTGGCAA+TGG - chr8_1:68491408-68491427 None:intergenic 45.0%
TAGGGTAAGTGTTTCGGACT+TGG + chr8_1:68491430-68491449 Msa1209860:intron 45.0%
! GTTTCGGACTTGGTTTGACT+TGG + chr8_1:68491440-68491459 Msa1209860:intron 45.0%
!! GACTTGGTTTGACTTGGTTG+TGG + chr8_1:68491446-68491465 Msa1209860:intron 45.0%
!! CTTGGTTTGACTTGGTTGTG+GGG + chr8_1:68491448-68491467 Msa1209860:intron 45.0%
!! GCTGGTCTTTCACTTCACTT+TGG + chr8_1:68491691-68491710 Msa1209860:intron 45.0%
TTGACTTCAATGTGGTTGGC+TGG + chr8_1:68492315-68492334 Msa1209860:intron 45.0%
! TGACTTCAATGTGGTTGGCT+GGG + chr8_1:68492316-68492335 Msa1209860:intron 45.0%
ATCGCACACCTAGTAGGAAA+AGG - chr8_1:68492860-68492879 None:intergenic 45.0%
GCAGATTGTCTGATTGAAGC+TGG + chr8_1:68492948-68492967 Msa1209860:intron 45.0%
!! CATGCAAGCTTTAAGCAAGC+CGG + chr8_1:68493478-68493497 Msa1209860:intron 45.0%
AATCATTCCATCCACGTTGC+TGG - chr8_1:68493508-68493527 None:intergenic 45.0%
TCTTCGCAAGAAGAAGGAAG+AGG - chr8_1:68493920-68493939 None:intergenic 45.0%
CCAGTATTTCCCTGTCTGTA+GGG - chr8_1:68494024-68494043 None:intergenic 45.0%
TCCAGTATTTCCCTGTCTGT+AGG - chr8_1:68494025-68494044 None:intergenic 45.0%
!! GAGCTTTAAATCCCAGACAC+TGG - chr8_1:68494183-68494202 None:intergenic 45.0%
TAAAGCTCACTCATCTAGGG+GGG + chr8_1:68494195-68494214 Msa1209860:intron 45.0%
! TCATCTAGGGGGGTCTTTTA+CGG + chr8_1:68494205-68494224 Msa1209860:intron 45.0%
ATTGAAACTGTGTAGAGGGG+TGG + chr8_1:68494251-68494270 Msa1209860:intron 45.0%
AGTAAGACCCAAAAGGGCTA+TGG + chr8_1:68494349-68494368 Msa1209860:CDS 45.0%
! CATGGAATCCATAGCCCTTT+TGG - chr8_1:68494360-68494379 None:intergenic 45.0%
GAACTATCCTTCGGGAATCG+TGG - chr8_1:68490457-68490476 None:intergenic 50.0%
CGTCTTCCGAACTATCCTTC+GGG - chr8_1:68490465-68490484 None:intergenic 50.0%
ATAGTTCGGAAGACGACGGA+GGG + chr8_1:68490470-68490489 Msa1209860:CDS 50.0%
! AAACGGTAATGGCACAAGCG+AGG + chr8_1:68490588-68490607 Msa1209860:CDS 50.0%
! GTTTGAGATCTTCGCACGTG+CGG + chr8_1:68490619-68490638 Msa1209860:CDS 50.0%
GGACATGAGAAGGTTGGAGT+TGG + chr8_1:68491290-68491309 Msa1209860:intron 50.0%
CATGAGAAGGTTGGAGTTGG+AGG + chr8_1:68491293-68491312 Msa1209860:CDS 50.0%
CAAAAGGCAGCTGAAGTCGA+AGG - chr8_1:68491838-68491857 None:intergenic 50.0%
! AACCAGCCCTTTTGCCAACA+CGG - chr8_1:68492419-68492438 None:intergenic 50.0%
ATGACTTCTATGTGGCTGGC+TGG + chr8_1:68492517-68492536 Msa1209860:intron 50.0%
! TGACTTCTATGTGGCTGGCT+GGG + chr8_1:68492518-68492537 Msa1209860:intron 50.0%
GGTGAAATCGCACACCTAGT+AGG - chr8_1:68492866-68492885 None:intergenic 50.0%
CCCTACAGACAGGGAAATAC+TGG + chr8_1:68494021-68494040 Msa1209860:intron 50.0%
! TAGGGGGGTCTTTTACGGTT+GGG + chr8_1:68494210-68494229 Msa1209860:intron 50.0%
! TTTTACGGTTGGGGCAAGGA+TGG + chr8_1:68494220-68494239 Msa1209860:intron 50.0%
TCGCCGGCGGAATCATGTTT+CGG - chr8_1:68490389-68490408 None:intergenic 55.0%
GGATGCGACACTCTCGCAAT+CGG - chr8_1:68490429-68490448 None:intergenic 55.0%
!! GATTGCGAGAGTGTCGCATC+CGG + chr8_1:68490428-68490447 Msa1209860:CDS 55.0%
GATAGTTCGGAAGACGACGG+AGG + chr8_1:68490469-68490488 Msa1209860:CDS 55.0%
GCGCAAGGGTTGAAACCCTA+TGG + chr8_1:68490539-68490558 Msa1209860:CDS 55.0%
AAATTGGAGGCTGTGCCTGC+AGG + chr8_1:68491029-68491048 Msa1209860:CDS 55.0%
! CTGCGTTGATCAGAACCTGC+AGG - chr8_1:68491047-68491066 None:intergenic 55.0%
AAGGCAGCTGAAGTCGAAGG+AGG - chr8_1:68491835-68491854 None:intergenic 55.0%
CATTCCATCCACGTTGCTGG+CGG - chr8_1:68493505-68493524 None:intergenic 55.0%
! CTAGGGGGGTCTTTTACGGT+TGG + chr8_1:68494209-68494228 Msa1209860:intron 55.0%
! AGGGGGGTCTTTTACGGTTG+GGG + chr8_1:68494211-68494230 Msa1209860:intron 55.0%
! GGTCTTTTACGGTTGGGGCA+AGG + chr8_1:68494216-68494235 Msa1209860:intron 55.0%
GTGTAGAGGGGTGGCAAGAT+TGG + chr8_1:68494260-68494279 Msa1209860:intron 55.0%
TAGAGGGGTGGCAAGATTGG+CGG + chr8_1:68494263-68494282 Msa1209860:intron 55.0%
!! CGCTGATTCATCTTCGCCGG+CGG - chr8_1:68490402-68490421 None:intergenic 60.0%
TGAGATCTTCGCACGTGCGG+TGG + chr8_1:68490622-68490641 Msa1209860:CDS 60.0%
CGTGCGGTGGCTAAAATGCG+CGG + chr8_1:68490635-68490654 Msa1209860:CDS 60.0%
CGGTGGCTAAAATGCGCGGT+GGG + chr8_1:68490639-68490658 Msa1209860:CDS 60.0%
! AGCCGTGTTGGCAAAAGGGC+TGG + chr8_1:68492414-68492433 Msa1209860:intron 60.0%
GCAAGATTGGCGGCGTGAAG+AGG + chr8_1:68494273-68494292 Msa1209860:CDS 60.0%
AGATTGGCGGCGTGAAGAGG+AGG + chr8_1:68494276-68494295 Msa1209860:CDS 60.0%
GATTGGCGGCGTGAAGAGGA+GGG + chr8_1:68494277-68494296 Msa1209860:CDS 60.0%
!! TGCGAGAGTGTCGCATCCGG+CGG + chr8_1:68490431-68490450 Msa1209860:CDS 65.0%
GCGGTGGCTAAAATGCGCGG+TGG + chr8_1:68490638-68490657 Msa1209860:CDS 65.0%
CATCCACGTTGCTGGCGGTC+CGG - chr8_1:68493500-68493519 None:intergenic 65.0%
ATTGGACCCTGTCGCTGCCC+CGG - chr8_1:68493873-68493892 None:intergenic 65.0%
CCTTCGGGAATCGTGGCCGC+CGG - chr8_1:68490450-68490469 None:intergenic 70.0%
AAGCCGGACCGCCAGCAACG+TGG + chr8_1:68493494-68493513 Msa1209860:intron 70.0%
CGGACCGCCAGCAACGTGGA+TGG + chr8_1:68493498-68493517 Msa1209860:intron 70.0%
GAAGACCCGGGGCAGCGACA+GGG + chr8_1:68493864-68493883 Msa1209860:intron 70.0%
TTGGACCCTGTCGCTGCCCC+GGG - chr8_1:68493872-68493891 None:intergenic 70.0%
CCGGCGGCCACGATTCCCGA+AGG + chr8_1:68490447-68490466 Msa1209860:CDS 75.0%
GGAAGACCCGGGGCAGCGAC+AGG + chr8_1:68493863-68493882 Msa1209860:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 68490362 68494394 68490362 ID=Msa1209860;Name=Msa1209860
chr8_1 mRNA 68490362 68494394 68490362 ID=Msa1209860-mRNA-1;Parent=Msa1209860;Name=Msa1209860-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.5|0.6|0.8|1|1|5|0|347
chr8_1 exon 68490362 68490798 68490362 ID=Msa1209860-mRNA-1:exon:22803;Parent=Msa1209860-mRNA-1
chr8_1 exon 68490962 68491200 68490962 ID=Msa1209860-mRNA-1:exon:22804;Parent=Msa1209860-mRNA-1
chr8_1 exon 68491291 68491433 68491291 ID=Msa1209860-mRNA-1:exon:22805;Parent=Msa1209860-mRNA-1
chr8_1 exon 68491536 68491631 68491536 ID=Msa1209860-mRNA-1:exon:22806;Parent=Msa1209860-mRNA-1
chr8_1 exon 68494266 68494394 68494266 ID=Msa1209860-mRNA-1:exon:22807;Parent=Msa1209860-mRNA-1
chr8_1 CDS 68490362 68490798 68490362 ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1
chr8_1 CDS 68490962 68491200 68490962 ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1
chr8_1 CDS 68491291 68491433 68491291 ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1
chr8_1 CDS 68491536 68491631 68491536 ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1
chr8_1 CDS 68494266 68494394 68494266 ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1
Gene Sequence

>Msa1209860

ATGGAACAACCAATCTACAATTTACCGAAACATGATTCCGCCGGCGAAGATGAATCAGCGATTTCCGATTGCGAGAGTGTCGCATCCGGCGGCCACGATTCCCGAAGGATAGTTCGGAAGACGACGGAGGGTGCAGATATCAACCTAATCCGAAGCAGATTCGTTTGTGGTTTAAGTGCGCAAGGGTTGAAACCCTATGGAGTAGCGATTTTCAGGAATCCTTGTAAAACGGTAATGGCACAAGCGAGGATTCAATCGTTTGAGATCTTCGCACGTGCGGTGGCTAAAATGCGCGGTGGGAATGCTAATGTGAAACACGTGTGGTACGGTGCTTCGAGTAGAGAAGAGATTGTTGATATTATTCAACACGGTTTTGGTTATGTTCATAGCAATGGATTGCGTCTTTCTCCAAACGATTCTCCACTTGAAAGGCACGATGTGAAAAGAACTGTTGTTGACGAACAAGGTTTTAGGCACTTGTTGCTTTGTCGTGTGATCATGGGAAAATTGGAGGCTGTGCCTGCAGGTTCTGATCAACGCAGACCGAGTTCAGAAGAATATGATTCTGGAGTGGATAGTTTTTCATCTCCCAAAGAGTTCATTGTTTGGAGTAACAAGATCAACACGCATGTCTTGCCTGAATATGTTATGAGTTTCAAACTTGCTTCCGACAAAGGACATGAGAAGGTTGGAGTTGGAGGGCAACATGTGAGACCGTCTTCGCCTTTTATGCAATTCCCGACTCTGATTTCTGCGCTTTCGAAGATATTGCCTCCATCTGATATTGTTTCCATTGCCAAGTTTCACAAGGAGTATAGGGATAAGAAGATTTCGCGACATGAAATGATACAAAAAGTTAGAAAAGTTGCAGGTGACAAATTGTTGTTTTCTGTTATCAAATCTTTCAGAGCAAAGAGGGGTGGCAAGATTGGCGGCGTGAAGAGGAGGGAGTTGAGTAGCAAGAAAGTTGATGGAGCGTATTATAATGAGTCATCAAGAGTAAGACCCAAAAGGGCTATGGATTCCATGAGTCGAATGCAATGA

Protein sequence

>Msa1209860

MEQPIYNLPKHDSAGEDESAISDCESVASGGHDSRRIVRKTTEGADINLIRSRFVCGLSAQGLKPYGVAIFRNPCKTVMAQARIQSFEIFARAVAKMRGGNANVKHVWYGASSREEIVDIIQHGFGYVHSNGLRLSPNDSPLERHDVKRTVVDEQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEYDSGVDSFSSPKEFIVWSNKINTHVLPEYVMSFKLASDKGHEKVGVGGQHVRPSSPFMQFPTLISALSKILPPSDIVSIAKFHKEYRDKKISRHEMIQKVRKVAGDKLLFSVIKSFRAKRGGKIGGVKRRELSSKKVDGAYYNESSRVRPKRAMDSMSRMQ*