Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1209860 | sp|Q9FJJ3|SRO5_ARATH | 41.975 | 243 | 122 | 6 | 68 | 301 | 70 | 302 | 2.46e-53 | 181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1209860 | A0A072UPT7 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 608 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003630 | Msa1209860 | 0.810589 | 1.069121e-50 | -8.615850e-47 |
Msa0010770 | Msa1209860 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
Msa0010800 | Msa1209860 | 0.825855 | 3.733381e-54 | -8.615850e-47 |
Msa0012710 | Msa1209860 | 0.850916 | 1.245801e-60 | -8.615850e-47 |
Msa0015090 | Msa1209860 | 0.826874 | 2.135136e-54 | -8.615850e-47 |
Msa0016510 | Msa1209860 | 0.816576 | 5.148917e-52 | -8.615850e-47 |
Msa0017320 | Msa1209860 | 0.850610 | 1.519463e-60 | -8.615850e-47 |
Msa0030480 | Msa1209860 | 0.806337 | 8.637753e-50 | -8.615850e-47 |
Msa0033850 | Msa1209860 | 0.820728 | 5.885064e-53 | -8.615850e-47 |
Msa0043650 | Msa1209860 | 0.811478 | 6.861606e-51 | -8.615850e-47 |
Msa0045550 | Msa1209860 | 0.819525 | 1.109611e-52 | -8.615850e-47 |
Msa0049750 | Msa1209860 | 0.831645 | 1.484675e-55 | -8.615850e-47 |
Msa0055070 | Msa1209860 | 0.800787 | 1.223574e-48 | -8.615850e-47 |
Msa0058310 | Msa1209860 | 0.826247 | 3.012982e-54 | -8.615850e-47 |
Msa0060070 | Msa1209860 | 0.824097 | 9.708154e-54 | -8.615850e-47 |
Msa0061500 | Msa1209860 | 0.835181 | 1.948299e-56 | -8.615850e-47 |
Msa0074750 | Msa1209860 | 0.826136 | 3.201597e-54 | -8.615850e-47 |
Msa0079230 | Msa1209860 | 0.835693 | 1.446784e-56 | -8.615850e-47 |
Msa0081620 | Msa1209860 | 0.801434 | 9.020881e-49 | -8.615850e-47 |
Msa0081650 | Msa1209860 | 0.811624 | 6.377841e-51 | -8.615850e-47 |
Msa0081940 | Msa1209860 | 0.820751 | 5.814078e-53 | -8.615850e-47 |
Msa0082050 | Msa1209860 | 0.812067 | 5.109419e-51 | -8.615850e-47 |
Msa0090510 | Msa1209860 | 0.804767 | 1.844762e-49 | -8.615850e-47 |
Msa0090550 | Msa1209860 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
Msa0090970 | Msa1209860 | 0.870994 | 9.580807e-67 | -8.615850e-47 |
Msa0092410 | Msa1209860 | 0.846322 | 2.335566e-59 | -8.615850e-47 |
Msa0095360 | Msa1209860 | 0.800821 | 1.204172e-48 | -8.615850e-47 |
Msa0095770 | Msa1209860 | 0.809554 | 1.786943e-50 | -8.615850e-47 |
Msa0096700 | Msa1209860 | 0.818757 | 1.659670e-52 | -8.615850e-47 |
Msa0098990 | Msa1209860 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
Msa0101020 | Msa1209860 | 0.805282 | 1.439476e-49 | -8.615850e-47 |
Msa0102140 | Msa1209860 | 0.839247 | 1.776468e-57 | -8.615850e-47 |
Msa0106050 | Msa1209860 | 0.816072 | 6.675754e-52 | -8.615850e-47 |
Msa0111080 | Msa1209860 | 0.878664 | 2.339450e-69 | -8.615850e-47 |
Msa0117520 | Msa1209860 | 0.801530 | 8.620550e-49 | -8.615850e-47 |
Msa0119440 | Msa1209860 | 0.828885 | 7.009339e-55 | -8.615850e-47 |
Msa0616450 | Msa1209860 | 0.800820 | 1.204742e-48 | -8.615850e-47 |
Msa0621600 | Msa1209860 | 0.810093 | 1.368214e-50 | -8.615850e-47 |
Msa0624060 | Msa1209860 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
Msa0624120 | Msa1209860 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
Msa0641340 | Msa1209860 | 0.813265 | 2.794109e-51 | -8.615850e-47 |
Msa0654620 | Msa1209860 | 0.850606 | 1.523448e-60 | -8.615850e-47 |
Msa0657120 | Msa1209860 | 0.814228 | 1.714734e-51 | -8.615850e-47 |
Msa0658680 | Msa1209860 | 0.841017 | 6.132697e-58 | -8.615850e-47 |
Msa0659790 | Msa1209860 | 0.844582 | 6.913706e-59 | -8.615850e-47 |
Msa0665080 | Msa1209860 | 0.801350 | 9.387124e-49 | -8.615850e-47 |
Msa0665520 | Msa1209860 | 0.818393 | 2.006977e-52 | -8.615850e-47 |
Msa0679550 | Msa1209860 | 0.815448 | 9.199293e-52 | -8.615850e-47 |
Msa0689780 | Msa1209860 | 0.802160 | 6.400998e-49 | -8.615850e-47 |
Msa0692650 | Msa1209860 | 0.809775 | 1.601733e-50 | -8.615850e-47 |
Msa0698410 | Msa1209860 | 0.846908 | 1.616018e-59 | -8.615850e-47 |
Msa0698440 | Msa1209860 | 0.822867 | 1.882021e-53 | -8.615850e-47 |
Msa0701100 | Msa1209860 | 0.832100 | 1.146029e-55 | -8.615850e-47 |
Msa0705990 | Msa1209860 | 0.847556 | 1.073287e-59 | -8.615850e-47 |
Msa0709120 | Msa1209860 | 0.819593 | 1.070662e-52 | -8.615850e-47 |
Msa0709160 | Msa1209860 | 0.802044 | 6.761972e-49 | -8.615850e-47 |
Msa0713380 | Msa1209860 | 0.800458 | 1.427621e-48 | -8.615850e-47 |
Msa0721340 | Msa1209860 | 0.850569 | 1.559888e-60 | -8.615850e-47 |
Msa0724370 | Msa1209860 | 0.863264 | 2.817898e-64 | -8.615850e-47 |
Msa0733250 | Msa1209860 | 0.804311 | 2.296019e-49 | -8.615850e-47 |
Msa0742150 | Msa1209860 | 0.812483 | 4.144421e-51 | -8.615850e-47 |
Msa0743530 | Msa1209860 | 0.832502 | 9.112330e-56 | -8.615850e-47 |
Msa0746170 | Msa1209860 | 0.827952 | 1.177376e-54 | -8.615850e-47 |
Msa0746210 | Msa1209860 | 0.825647 | 4.182189e-54 | -8.615850e-47 |
Msa0748660 | Msa1209860 | 0.812041 | 5.175967e-51 | -8.615850e-47 |
Msa0749440 | Msa1209860 | 0.811888 | 5.589786e-51 | -8.615850e-47 |
Msa0750810 | Msa1209860 | 0.807244 | 5.556945e-50 | -8.615850e-47 |
Msa0750850 | Msa1209860 | 0.800969 | 1.122884e-48 | -8.615850e-47 |
Msa0758250 | Msa1209860 | 0.812544 | 4.019914e-51 | -8.615850e-47 |
Msa0763890 | Msa1209860 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
Msa0763920 | Msa1209860 | 0.819406 | 1.180781e-52 | -8.615850e-47 |
Msa0764920 | Msa1209860 | 0.855139 | 7.710798e-62 | -8.615850e-47 |
Msa0765180 | Msa1209860 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
Msa0775560 | Msa1209860 | 0.841225 | 5.407383e-58 | -8.615850e-47 |
Msa0776750 | Msa1209860 | 0.811403 | 7.125878e-51 | -8.615850e-47 |
Msa0779260 | Msa1209860 | 0.813542 | 2.427870e-51 | -8.615850e-47 |
Msa0786070 | Msa1209860 | 0.846703 | 1.838517e-59 | -8.615850e-47 |
Msa0789560 | Msa1209860 | 0.839184 | 1.844065e-57 | -8.615850e-47 |
Msa0794210 | Msa1209860 | 0.837544 | 4.883976e-57 | -8.615850e-47 |
Msa0805920 | Msa1209860 | 0.835705 | 1.436686e-56 | -8.615850e-47 |
Msa0809140 | Msa1209860 | 0.817202 | 3.726475e-52 | -8.615850e-47 |
Msa0811040 | Msa1209860 | 0.809620 | 1.729715e-50 | -8.615850e-47 |
Msa0812950 | Msa1209860 | 0.868583 | 5.860133e-66 | -8.615850e-47 |
Msa0822170 | Msa1209860 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
Msa0823440 | Msa1209860 | 0.812337 | 4.460379e-51 | -8.615850e-47 |
Msa0829220 | Msa1209860 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
Msa0836650 | Msa1209860 | 0.815196 | 1.046319e-51 | -8.615850e-47 |
Msa0128430 | Msa1209860 | 0.826669 | 2.389936e-54 | -8.615850e-47 |
Msa0130720 | Msa1209860 | 0.800199 | 1.612430e-48 | -8.615850e-47 |
Msa0130850 | Msa1209860 | 0.812636 | 3.838047e-51 | -8.615850e-47 |
Msa0136630 | Msa1209860 | 0.861673 | 8.698308e-64 | -8.615850e-47 |
Msa0137510 | Msa1209860 | 0.803016 | 4.263392e-49 | -8.615850e-47 |
Msa0138020 | Msa1209860 | 0.818716 | 1.695007e-52 | -8.615850e-47 |
Msa0138210 | Msa1209860 | 0.813207 | 2.876174e-51 | -8.615850e-47 |
Msa0138640 | Msa1209860 | 0.821365 | 4.197603e-53 | -8.615850e-47 |
Msa0139670 | Msa1209860 | 0.821665 | 3.578896e-53 | -8.615850e-47 |
Msa0142280 | Msa1209860 | 0.828702 | 7.761029e-55 | -8.615850e-47 |
Msa0142500 | Msa1209860 | 0.838840 | 2.263707e-57 | -8.615850e-47 |
Msa0145110 | Msa1209860 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
Msa0145740 | Msa1209860 | 0.802859 | 4.593902e-49 | -8.615850e-47 |
Msa0152560 | Msa1209860 | 0.853121 | 2.946769e-61 | -8.615850e-47 |
Msa0154920 | Msa1209860 | 0.865921 | 4.158248e-65 | -8.615850e-47 |
Msa0160960 | Msa1209860 | 0.812360 | 4.408037e-51 | -8.615850e-47 |
Msa0171980 | Msa1209860 | 0.842035 | 3.305830e-58 | -8.615850e-47 |
Msa0173960 | Msa1209860 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
Msa0176030 | Msa1209860 | 0.808110 | 3.637318e-50 | -8.615850e-47 |
Msa0183420 | Msa1209860 | 0.817927 | 2.558520e-52 | -8.615850e-47 |
Msa0183450 | Msa1209860 | 0.852884 | 3.442641e-61 | -8.615850e-47 |
Msa0183870 | Msa1209860 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
Msa0186950 | Msa1209860 | 0.807821 | 4.191943e-50 | -8.615850e-47 |
Msa0187310 | Msa1209860 | 0.829165 | 5.997156e-55 | -8.615850e-47 |
Msa0187490 | Msa1209860 | 0.848369 | 6.404746e-60 | -8.615850e-47 |
Msa0187830 | Msa1209860 | 0.818415 | 1.983516e-52 | -8.615850e-47 |
Msa0189610 | Msa1209860 | 0.838227 | 3.260266e-57 | -8.615850e-47 |
Msa0194010 | Msa1209860 | 0.822297 | 2.554399e-53 | -8.615850e-47 |
Msa0197610 | Msa1209860 | 0.831908 | 1.278484e-55 | -8.615850e-47 |
Msa0202930 | Msa1209860 | 0.847613 | 1.034978e-59 | -8.615850e-47 |
Msa0207030 | Msa1209860 | 0.822380 | 2.443373e-53 | -8.615850e-47 |
Msa0213430 | Msa1209860 | 0.841743 | 3.948819e-58 | -8.615850e-47 |
Msa0220750 | Msa1209860 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
Msa0222980 | Msa1209860 | 0.834877 | 2.324596e-56 | -8.615850e-47 |
Msa0232340 | Msa1209860 | 0.802837 | 4.641411e-49 | -8.615850e-47 |
Msa0233370 | Msa1209860 | 0.818471 | 1.926982e-52 | -8.615850e-47 |
Msa0235880 | Msa1209860 | 0.826487 | 2.640604e-54 | -8.615850e-47 |
Msa0236070 | Msa1209860 | 0.845555 | 3.775382e-59 | -8.615850e-47 |
Msa0364790 | Msa1209860 | 0.834724 | 2.539492e-56 | -8.615850e-47 |
Msa0366210 | Msa1209860 | 0.808399 | 3.156358e-50 | -8.615850e-47 |
Msa0371950 | Msa1209860 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
Msa0376020 | Msa1209860 | 0.806319 | 8.713049e-50 | -8.615850e-47 |
Msa0376600 | Msa1209860 | 0.848759 | 4.993070e-60 | -8.615850e-47 |
Msa0378010 | Msa1209860 | 0.811413 | 7.090069e-51 | -8.615850e-47 |
Msa0380600 | Msa1209860 | 0.846678 | 1.867996e-59 | -8.615850e-47 |
Msa0382310 | Msa1209860 | 0.808076 | 3.698469e-50 | -8.615850e-47 |
Msa0382370 | Msa1209860 | 0.811527 | 6.695046e-51 | -8.615850e-47 |
Msa0387050 | Msa1209860 | 0.830790 | 2.407524e-55 | -8.615850e-47 |
Msa0388730 | Msa1209860 | 0.828852 | 7.138438e-55 | -8.615850e-47 |
Msa0395980 | Msa1209860 | 0.806410 | 8.337886e-50 | -8.615850e-47 |
Msa0397250 | Msa1209860 | 0.805328 | 1.407959e-49 | -8.615850e-47 |
Msa0403490 | Msa1209860 | 0.947046 | 1.437041e-105 | -8.615850e-47 |
Msa0403770 | Msa1209860 | 0.823755 | 1.167372e-53 | -8.615850e-47 |
Msa0414140 | Msa1209860 | 0.804100 | 2.540047e-49 | -8.615850e-47 |
Msa0418400 | Msa1209860 | 0.822183 | 2.715257e-53 | -8.615850e-47 |
Msa0422180 | Msa1209860 | 0.825111 | 5.602592e-54 | -8.615850e-47 |
Msa0427580 | Msa1209860 | 0.840436 | 8.707668e-58 | -8.615850e-47 |
Msa0430240 | Msa1209860 | 0.851697 | 7.496636e-61 | -8.615850e-47 |
Msa0431210 | Msa1209860 | 0.823094 | 1.666394e-53 | -8.615850e-47 |
Msa0432160 | Msa1209860 | 0.810969 | 8.846978e-51 | -8.615850e-47 |
Msa0432500 | Msa1209860 | 0.827009 | 1.982484e-54 | -8.615850e-47 |
Msa0448610 | Msa1209860 | 0.827181 | 1.803262e-54 | -8.615850e-47 |
Msa0457990 | Msa1209860 | 0.814368 | 1.596899e-51 | -8.615850e-47 |
Msa0472710 | Msa1209860 | 0.803570 | 3.273104e-49 | -8.615850e-47 |
Msa0472770 | Msa1209860 | 0.836823 | 7.464344e-57 | -8.615850e-47 |
Msa0476680 | Msa1209860 | 0.810348 | 1.205108e-50 | -8.615850e-47 |
Msa0481280 | Msa1209860 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
Msa0482180 | Msa1209860 | 0.824983 | 6.003883e-54 | -8.615850e-47 |
Msa0985180 | Msa1209860 | 0.804234 | 2.382465e-49 | -8.615850e-47 |
Msa0985220 | Msa1209860 | 0.800818 | 1.205598e-48 | -8.615850e-47 |
Msa0992600 | Msa1209860 | 0.815088 | 1.105907e-51 | -8.615850e-47 |
Msa0994370 | Msa1209860 | 0.800821 | 1.203855e-48 | -8.615850e-47 |
Msa0994910 | Msa1209860 | 0.815063 | 1.119839e-51 | -8.615850e-47 |
Msa1024680 | Msa1209860 | 0.836215 | 1.066241e-56 | -8.615850e-47 |
Msa1026640 | Msa1209860 | 0.844820 | 5.966383e-59 | -8.615850e-47 |
Msa1036740 | Msa1209860 | 0.824729 | 6.893597e-54 | -8.615850e-47 |
Msa1036910 | Msa1209860 | 0.836065 | 1.163833e-56 | -8.615850e-47 |
Msa1042660 | Msa1209860 | 0.834976 | 2.194941e-56 | -8.615850e-47 |
Msa1043120 | Msa1209860 | 0.812333 | 4.468431e-51 | -8.615850e-47 |
Msa1054510 | Msa1209860 | 0.820989 | 5.123128e-53 | -8.615850e-47 |
Msa1062040 | Msa1209860 | 0.819509 | 1.118807e-52 | -8.615850e-47 |
Msa1063400 | Msa1209860 | 0.814113 | 1.817957e-51 | -8.615850e-47 |
Msa1063420 | Msa1209860 | 0.838975 | 2.088992e-57 | -8.615850e-47 |
Msa1071320 | Msa1209860 | 0.817692 | 2.889802e-52 | -8.615850e-47 |
Msa1074350 | Msa1209860 | 0.832021 | 1.198664e-55 | -8.615850e-47 |
Msa1077070 | Msa1209860 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
Msa1080490 | Msa1209860 | 0.816630 | 5.009631e-52 | -8.615850e-47 |
Msa1093100 | Msa1209860 | 0.802801 | 4.722722e-49 | -8.615850e-47 |
Msa1094280 | Msa1209860 | 0.810822 | 9.519849e-51 | -8.615850e-47 |
Msa1098890 | Msa1209860 | 0.801100 | 1.055887e-48 | -8.615850e-47 |
Msa0240270 | Msa1209860 | 0.840590 | 7.936487e-58 | -8.615850e-47 |
Msa0244970 | Msa1209860 | 0.815092 | 1.103773e-51 | -8.615850e-47 |
Msa0244980 | Msa1209860 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
Msa0253180 | Msa1209860 | 0.806559 | 7.757248e-50 | -8.615850e-47 |
Msa0262370 | Msa1209860 | 0.836473 | 9.165672e-57 | -8.615850e-47 |
Msa0264310 | Msa1209860 | 0.815401 | 9.420711e-52 | -8.615850e-47 |
Msa0265600 | Msa1209860 | 0.801881 | 7.303521e-49 | -8.615850e-47 |
Msa0269560 | Msa1209860 | 0.842380 | 2.678663e-58 | -8.615850e-47 |
Msa0271550 | Msa1209860 | 0.810333 | 1.214191e-50 | -8.615850e-47 |
Msa0271790 | Msa1209860 | 0.809396 | 1.931554e-50 | -8.615850e-47 |
Msa0274100 | Msa1209860 | 0.805789 | 1.126505e-49 | -8.615850e-47 |
Msa0276430 | Msa1209860 | 0.812408 | 4.304701e-51 | -8.615850e-47 |
Msa0280110 | Msa1209860 | 0.810828 | 9.491463e-51 | -8.615850e-47 |
Msa0282720 | Msa1209860 | 0.812791 | 3.549707e-51 | -8.615850e-47 |
Msa0283420 | Msa1209860 | 0.800201 | 1.610540e-48 | -8.615850e-47 |
Msa0284450 | Msa1209860 | 0.845587 | 3.701066e-59 | -8.615850e-47 |
Msa0285330 | Msa1209860 | 0.814092 | 1.837496e-51 | -8.615850e-47 |
Msa0300150 | Msa1209860 | 0.831752 | 1.397126e-55 | -8.615850e-47 |
Msa0302840 | Msa1209860 | 0.801211 | 1.002053e-48 | -8.615850e-47 |
Msa0304100 | Msa1209860 | 0.801855 | 7.395444e-49 | -8.615850e-47 |
Msa0304840 | Msa1209860 | 0.800612 | 1.328452e-48 | -8.615850e-47 |
Msa0305620 | Msa1209860 | 0.810394 | 1.177982e-50 | -8.615850e-47 |
Msa0308440 | Msa1209860 | 0.835341 | 1.775302e-56 | -8.615850e-47 |
Msa0309270 | Msa1209860 | 0.808266 | 3.370723e-50 | -8.615850e-47 |
Msa0311470 | Msa1209860 | 0.814875 | 1.232731e-51 | -8.615850e-47 |
Msa0319290 | Msa1209860 | 0.850438 | 1.697796e-60 | -8.615850e-47 |
Msa0321690 | Msa1209860 | 0.825889 | 3.664617e-54 | -8.615850e-47 |
Msa0322680 | Msa1209860 | 0.831959 | 1.241490e-55 | -8.615850e-47 |
Msa0341230 | Msa1209860 | 0.802730 | 4.883739e-49 | -8.615850e-47 |
Msa0347750 | Msa1209860 | 0.830341 | 3.101392e-55 | -8.615850e-47 |
Msa0347950 | Msa1209860 | 0.817359 | 3.436179e-52 | -8.615850e-47 |
Msa0347990 | Msa1209860 | 0.825831 | 3.782533e-54 | -8.615850e-47 |
Msa1107200 | Msa1209860 | 0.833397 | 5.459814e-56 | -8.615850e-47 |
Msa1107260 | Msa1209860 | 0.814536 | 1.465279e-51 | -8.615850e-47 |
Msa1108720 | Msa1209860 | 0.816847 | 4.477027e-52 | -8.615850e-47 |
Msa1109810 | Msa1209860 | 0.807832 | 4.168403e-50 | -8.615850e-47 |
Msa1115280 | Msa1209860 | 0.844613 | 6.783662e-59 | -8.615850e-47 |
Msa1122780 | Msa1209860 | 0.814398 | 1.572629e-51 | -8.615850e-47 |
Msa1126240 | Msa1209860 | 0.833046 | 6.676049e-56 | -8.615850e-47 |
Msa1127430 | Msa1209860 | 0.830962 | 2.185286e-55 | -8.615850e-47 |
Msa1143020 | Msa1209860 | 0.823522 | 1.323579e-53 | -8.615850e-47 |
Msa1144040 | Msa1209860 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
Msa1150780 | Msa1209860 | 0.818646 | 1.758168e-52 | -8.615850e-47 |
Msa1150900 | Msa1209860 | 0.805510 | 1.289166e-49 | -8.615850e-47 |
Msa1152410 | Msa1209860 | 0.819607 | 1.062774e-52 | -8.615850e-47 |
Msa1161920 | Msa1209860 | 0.810353 | 1.202095e-50 | -8.615850e-47 |
Msa1163870 | Msa1209860 | 0.823020 | 1.734235e-53 | -8.615850e-47 |
Msa1164020 | Msa1209860 | 0.834345 | 3.162941e-56 | -8.615850e-47 |
Msa1167010 | Msa1209860 | 0.808055 | 3.737935e-50 | -8.615850e-47 |
Msa1184780 | Msa1209860 | 0.832257 | 1.048159e-55 | -8.615850e-47 |
Msa1185460 | Msa1209860 | 0.832101 | 1.145586e-55 | -8.615850e-47 |
Msa1187590 | Msa1209860 | 0.816049 | 6.757350e-52 | -8.615850e-47 |
Msa1197070 | Msa1209860 | 0.844448 | 7.513191e-59 | -8.615850e-47 |
Msa1205590 | Msa1209860 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
Msa1207310 | Msa1209860 | 0.808743 | 2.666201e-50 | -8.615850e-47 |
Msa1207350 | Msa1209860 | 0.804821 | 1.796743e-49 | -8.615850e-47 |
Msa1208370 | Msa1209860 | 0.837394 | 5.334418e-57 | -8.615850e-47 |
Msa1208380 | Msa1209860 | 0.802950 | 4.397771e-49 | -8.615850e-47 |
Msa1209190 | Msa1209860 | 0.941788 | 2.257775e-101 | -8.615850e-47 |
Msa1209860 | Msa1214170 | 0.846428 | 2.185487e-59 | -8.615850e-47 |
Msa1209860 | Msa1218580 | 0.841891 | 3.608117e-58 | -8.615850e-47 |
Msa1209860 | Msa1224200 | 0.813975 | 1.949944e-51 | -8.615850e-47 |
Msa1209860 | Msa1225600 | 0.822553 | 2.227909e-53 | -8.615850e-47 |
Msa1209860 | Msa1229480 | 0.820800 | 5.662850e-53 | -8.615850e-47 |
Msa1209860 | Msa1229610 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
Msa1209860 | Msa1234620 | 0.823270 | 1.515733e-53 | -8.615850e-47 |
Msa1209860 | Msa1239400 | 0.818439 | 1.959473e-52 | -8.615850e-47 |
Msa1209860 | Msa1250110 | 0.844069 | 9.496766e-59 | -8.615850e-47 |
Msa1209860 | Msa1250730 | 0.831407 | 1.698547e-55 | -8.615850e-47 |
Msa1209860 | Msa1257070 | 0.800705 | 1.271407e-48 | -8.615850e-47 |
Msa1209860 | Msa1258370 | 0.829975 | 3.810800e-55 | -8.615850e-47 |
Msa1209860 | Msa1260680 | 0.831242 | 1.865683e-55 | -8.615850e-47 |
Msa1209860 | Msa1262010 | 0.823774 | 1.155766e-53 | -8.615850e-47 |
Msa1209860 | Msa1270660 | 0.849759 | 2.630994e-60 | -8.615850e-47 |
Msa1209860 | Msa1270730 | 0.850845 | 1.305076e-60 | -8.615850e-47 |
Msa1209860 | Msa1272320 | 0.818719 | 1.692776e-52 | -8.615850e-47 |
Msa1209860 | Msa1280170 | 0.835654 | 1.479392e-56 | -8.615850e-47 |
Msa1209860 | Msa1291450 | 0.802773 | 4.784902e-49 | -8.615850e-47 |
Msa1209860 | Msa1295330 | 0.800591 | 1.341080e-48 | -8.615850e-47 |
Msa1209860 | Msa1295930 | 0.804302 | 2.306027e-49 | -8.615850e-47 |
Msa1209860 | Msa1297530 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
Msa1209860 | Msa1304810 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
Msa1209860 | Msa1307180 | 0.833633 | 4.766818e-56 | -8.615850e-47 |
Msa1209860 | Msa1316360 | 0.821497 | 3.912508e-53 | -8.615850e-47 |
Msa1209860 | Msa1316630 | 0.829478 | 5.032682e-55 | -8.615850e-47 |
Msa1209860 | Msa1329800 | 0.804225 | 2.392555e-49 | -8.615850e-47 |
Msa1209860 | Msa1330550 | 0.858689 | 6.933538e-63 | -8.615850e-47 |
Msa1209860 | Msa1332050 | 0.860851 | 1.548039e-63 | -8.615850e-47 |
Msa1209860 | Msa1335230 | 0.852618 | 4.101282e-61 | -8.615850e-47 |
Msa1209860 | Msa1336040 | 0.833288 | 5.811847e-56 | -8.615850e-47 |
Msa1209860 | Msa1337480 | 0.804899 | 1.731062e-49 | -8.615850e-47 |
Msa1209860 | Msa1339320 | 0.805151 | 1.532832e-49 | -8.615850e-47 |
Msa1209860 | Msa1341490 | 0.810115 | 1.352911e-50 | -8.615850e-47 |
Msa1209860 | Msa1349450 | 0.813006 | 3.184184e-51 | -8.615850e-47 |
Msa1209860 | Msa1352660 | 0.838530 | 2.722388e-57 | -8.615850e-47 |
Msa1209860 | Msa1355890 | 0.811911 | 5.523764e-51 | -8.615850e-47 |
Msa1209860 | Msa1360020 | 0.841660 | 4.153334e-58 | -8.615850e-47 |
Msa1209860 | Msa1364160 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
Msa1209860 | Msa1369920 | -0.817246 | 3.641663e-52 | -8.615850e-47 |
Msa1209860 | Msa1370590 | 0.831077 | 2.048212e-55 | -8.615850e-47 |
Msa1209860 | Msa1371940 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
Msa1209860 | Msa1372290 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
Msa1209860 | Msa1378680 | 0.830393 | 3.012557e-55 | -8.615850e-47 |
Msa1209860 | Msa1382020 | 0.833428 | 5.363679e-56 | -8.615850e-47 |
Msa1209860 | Msa1384100 | 0.830638 | 2.623300e-55 | -8.615850e-47 |
Msa1209860 | Msa1400120 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
Msa1209860 | Msa1400930 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
Msa1209860 | Msa1411980 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
Msa1209860 | Msa1416260 | 0.813930 | 1.994271e-51 | -8.615850e-47 |
Msa1209860 | Msa1418920 | 0.805812 | 1.113946e-49 | -8.615850e-47 |
Msa1209860 | Msa1420270 | 0.809453 | 1.877802e-50 | -8.615850e-47 |
Msa1209860 | Msa1421210 | 0.833192 | 6.141872e-56 | -8.615850e-47 |
Msa1209860 | Msa1421900 | 0.824249 | 8.940421e-54 | -8.615850e-47 |
Msa1209860 | Msa1423820 | 0.831472 | 1.637448e-55 | -8.615850e-47 |
Msa1209860 | Msa1424630 | 0.811050 | 8.498319e-51 | -8.615850e-47 |
Msa1209860 | Msa1428780 | 0.829682 | 4.490288e-55 | -8.615850e-47 |
Msa1209860 | Msa1430130 | 0.865994 | 3.940853e-65 | -8.615850e-47 |
Msa1209860 | Msa1430550 | 0.822024 | 2.955769e-53 | -8.615850e-47 |
Msa1209860 | Msa1434040 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
Msa1209860 | Msa1436600 | 0.841616 | 4.265316e-58 | -8.615850e-47 |
Msa1209860 | Msa1437330 | 0.842277 | 2.852878e-58 | -8.615850e-47 |
Msa1209860 | Msa1438840 | 0.833609 | 4.832862e-56 | -8.615850e-47 |
Msa1209860 | Msa1442790 | 0.843312 | 1.513805e-58 | -8.615850e-47 |
Msa1209860 | Msa1444120 | 0.835383 | 1.732894e-56 | -8.615850e-47 |
Msa1209860 | Msa1444260 | 0.817146 | 3.836703e-52 | -8.615850e-47 |
Msa1209860 | Msa1454960 | 0.808143 | 3.579800e-50 | -8.615850e-47 |
Msa1209860 | Msa1457160 | 0.809481 | 1.852786e-50 | -8.615850e-47 |
Msa1209860 | Msa1460750 | 0.866835 | 2.132469e-65 | -8.615850e-47 |
Msa1209860 | Msa1462360 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
Msa1209860 | Msa1462470 | 0.842811 | 2.058287e-58 | -8.615850e-47 |
Msa1209860 | Msa1463600 | 0.842269 | 2.866514e-58 | -8.615850e-47 |
Msa1209860 | Msa1465180 | 0.820005 | 8.620039e-53 | -8.615850e-47 |
Msa0482940 | Msa1209860 | 0.829679 | 4.498875e-55 | -8.615850e-47 |
Msa0491000 | Msa1209860 | 0.820686 | 6.015929e-53 | -8.615850e-47 |
Msa0496970 | Msa1209860 | 0.802126 | 6.502764e-49 | -8.615850e-47 |
Msa0500400 | Msa1209860 | 0.803545 | 3.312322e-49 | -8.615850e-47 |
Msa0504100 | Msa1209860 | 0.805859 | 1.089244e-49 | -8.615850e-47 |
Msa0514610 | Msa1209860 | 0.848070 | 7.744028e-60 | -8.615850e-47 |
Msa0516020 | Msa1209860 | 0.805445 | 1.330127e-49 | -8.615850e-47 |
Msa0516240 | Msa1209860 | 0.815618 | 8.429696e-52 | -8.615850e-47 |
Msa0518170 | Msa1209860 | 0.842015 | 3.346638e-58 | -8.615850e-47 |
Msa0519160 | Msa1209860 | 0.800442 | 1.438378e-48 | -8.615850e-47 |
Msa0520270 | Msa1209860 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
Msa0521010 | Msa1209860 | 0.809746 | 1.624432e-50 | -8.615850e-47 |
Msa0527740 | Msa1209860 | 0.804316 | 2.290756e-49 | -8.615850e-47 |
Msa0534410 | Msa1209860 | 0.813854 | 2.073426e-51 | -8.615850e-47 |
Msa0534870 | Msa1209860 | 0.802226 | 6.203471e-49 | -8.615850e-47 |
Msa0537770 | Msa1209860 | 0.806738 | 7.108337e-50 | -8.615850e-47 |
Msa0538160 | Msa1209860 | 0.829205 | 5.863185e-55 | -8.615850e-47 |
Msa0544170 | Msa1209860 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
Msa0566350 | Msa1209860 | 0.850326 | 1.825338e-60 | -8.615850e-47 |
Msa0566750 | Msa1209860 | 0.848710 | 5.152149e-60 | -8.615850e-47 |
Msa0569780 | Msa1209860 | 0.870067 | 1.929902e-66 | -8.615850e-47 |
Msa0583670 | Msa1209860 | 0.815351 | 9.664419e-52 | -8.615850e-47 |
Msa0594200 | Msa1209860 | 0.812508 | 4.093529e-51 | -8.615850e-47 |
Msa0600080 | Msa1209860 | 0.803886 | 2.813703e-49 | -8.615850e-47 |
Msa0844110 | Msa1209860 | 0.802568 | 5.275580e-49 | -8.615850e-47 |
Msa0844610 | Msa1209860 | 0.853013 | 3.162204e-61 | -8.615850e-47 |
Msa0847470 | Msa1209860 | 0.827442 | 1.561162e-54 | -8.615850e-47 |
Msa0853440 | Msa1209860 | 0.838380 | 2.976027e-57 | -8.615850e-47 |
Msa0861470 | Msa1209860 | 0.814263 | 1.684256e-51 | -8.615850e-47 |
Msa0861570 | Msa1209860 | 0.816166 | 6.361863e-52 | -8.615850e-47 |
Msa0862280 | Msa1209860 | 0.842564 | 2.393858e-58 | -8.615850e-47 |
Msa0863720 | Msa1209860 | 0.813833 | 2.095513e-51 | -8.615850e-47 |
Msa0865970 | Msa1209860 | 0.802332 | 5.899329e-49 | -8.615850e-47 |
Msa0866070 | Msa1209860 | 0.803031 | 4.232246e-49 | -8.615850e-47 |
Msa0877710 | Msa1209860 | 0.836146 | 1.110258e-56 | -8.615850e-47 |
Msa0880810 | Msa1209860 | 0.842946 | 1.895745e-58 | -8.615850e-47 |
Msa0882400 | Msa1209860 | 0.806340 | 8.627140e-50 | -8.615850e-47 |
Msa0902830 | Msa1209860 | 0.823005 | 1.748364e-53 | -8.615850e-47 |
Msa0934840 | Msa1209860 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
Msa0942700 | Msa1209860 | 0.822271 | 2.589595e-53 | -8.615850e-47 |
Msa0970480 | Msa1209860 | 0.805189 | 1.505265e-49 | -8.615850e-47 |
Msa0972810 | Msa1209860 | 0.814107 | 1.823200e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1209860 | MtrunA17_Chr4g0059061 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 608 |
Msa1209860 | MtrunA17_Chr3g0117631 | 48.852 | 305 | 139 | 5 | 13 | 306 | 15 | 313 | 1.04e-96 | 290 |
Msa1209860 | MtrunA17_Chr8g0380321 | 37.594 | 266 | 152 | 6 | 43 | 299 | 19 | 279 | 4.07e-53 | 177 |
Msa1209860 | MtrunA17_Chr1g0210871 | 31.894 | 301 | 158 | 9 | 46 | 306 | 273 | 566 | 1.03e-40 | 150 |
Msa1209860 | MtrunA17_Chr5g0412301 | 31.229 | 301 | 159 | 9 | 46 | 305 | 266 | 559 | 4.57e-36 | 137 |
Msa1209860 | MtrunA17_Chr5g0410781 | 35.294 | 187 | 106 | 6 | 43 | 220 | 59 | 239 | 6.03e-30 | 115 |
Msa1209860 | MtrunA17_Chr7g0217951 | 34.946 | 186 | 102 | 7 | 46 | 220 | 249 | 426 | 4.10e-26 | 108 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1209860 | AT5G62520.1 | 41.975 | 243 | 122 | 6 | 68 | 301 | 70 | 302 | 2.50e-54 | 181 |
Msa1209860 | AT1G23550.1 | 37.407 | 270 | 150 | 5 | 48 | 305 | 56 | 318 | 9.64e-54 | 179 |
Msa1209860 | AT3G47720.1 | 40.891 | 247 | 124 | 6 | 68 | 305 | 78 | 311 | 1.84e-51 | 173 |
Msa1209860 | AT1G70440.2 | 31.908 | 304 | 174 | 9 | 15 | 303 | 19 | 304 | 2.17e-44 | 155 |
Msa1209860 | AT1G70440.1 | 31.908 | 304 | 174 | 9 | 15 | 303 | 19 | 304 | 2.17e-44 | 155 |
Msa1209860 | AT1G32230.1 | 30.702 | 342 | 179 | 10 | 11 | 303 | 235 | 567 | 1.71e-39 | 147 |
Msa1209860 | AT1G32230.3 | 30.205 | 341 | 181 | 9 | 11 | 303 | 235 | 566 | 6.22e-39 | 145 |
Msa1209860 | AT1G32230.6 | 30.205 | 341 | 181 | 9 | 11 | 303 | 235 | 566 | 9.51e-39 | 145 |
Msa1209860 | AT1G32230.4 | 30.205 | 341 | 181 | 9 | 11 | 303 | 235 | 566 | 9.51e-39 | 145 |
Msa1209860 | AT1G32230.2 | 30.205 | 341 | 181 | 9 | 11 | 303 | 235 | 566 | 9.51e-39 | 145 |
Msa1209860 | AT1G32230.5 | 30.205 | 341 | 181 | 9 | 11 | 303 | 235 | 566 | 9.51e-39 | 145 |
Msa1209860 | AT5G62520.2 | 41.975 | 162 | 82 | 5 | 68 | 220 | 70 | 228 | 1.01e-32 | 122 |
Msa1209860 | AT2G35510.1 | 27.476 | 313 | 178 | 9 | 38 | 307 | 262 | 568 | 8.85e-29 | 117 |
Msa1209860 | AT2G35510.3 | 27.476 | 313 | 178 | 9 | 38 | 307 | 262 | 568 | 8.85e-29 | 117 |
Msa1209860 | AT2G35510.2 | 30.526 | 190 | 121 | 5 | 38 | 222 | 262 | 445 | 1.21e-23 | 101 |
Find 85 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGGAATCCATAGCCCTTT+TGG | 0.255696 | 8_1:-68494357 | None:intergenic |
TTGAAACTCATAACATATTC+AGG | 0.280626 | 8_1:-68491161 | None:intergenic |
GATATTATTCAACACGGTTT+TGG | 0.293672 | 8_1:+68490716 | Msa1209860:CDS |
ACTCCAAACAATGAACTCTT+TGG | 0.300883 | 8_1:-68491114 | None:intergenic |
AAACGAATCTGCTTCGGATT+AGG | 0.308031 | 8_1:-68490505 | None:intergenic |
TCGTGTGATCATGGGAAAAT+TGG | 0.321394 | 8_1:+68491013 | Msa1209860:CDS |
CCAAGTTTCACAAGGAGTAT+AGG | 0.324583 | 8_1:+68491411 | Msa1209860:CDS |
CTCCCAAAGAGTTCATTGTT+TGG | 0.353473 | 8_1:+68491111 | Msa1209860:CDS |
AGAGTCGGGAATTGCATAAA+AGG | 0.360107 | 8_1:-68491338 | None:intergenic |
CAAGTTTCACAAGGAGTATA+GGG | 0.369249 | 8_1:+68491412 | Msa1209860:CDS |
CCTATACTCCTTGTGAAACT+TGG | 0.373522 | 8_1:-68491411 | None:intergenic |
AGTTCAGAAGAATATGATTC+TGG | 0.386842 | 8_1:+68491071 | Msa1209860:CDS |
CAAGTACACAATACCTTTGT+CGG | 0.414967 | 8_1:-68491192 | None:intergenic |
CTCCAAACAATGAACTCTTT+GGG | 0.417033 | 8_1:-68491113 | None:intergenic |
TCGTCTTCCGAACTATCCTT+CGG | 0.427547 | 8_1:-68490463 | None:intergenic |
CTTTCAAGTGGAGAATCGTT+TGG | 0.428078 | 8_1:-68490770 | None:intergenic |
TGTTTCGGTAAATTGTAGAT+TGG | 0.431614 | 8_1:-68490371 | None:intergenic |
TTTGTAGGACATGAGAAGGT+TGG | 0.436670 | 8_1:+68491284 | Msa1209860:intron |
AACCACAAACGAATCTGCTT+CGG | 0.446185 | 8_1:-68490511 | None:intergenic |
TCGCCGGCGGAATCATGTTT+CGG | 0.448520 | 8_1:-68490386 | None:intergenic |
CGTCTTCCGAACTATCCTTC+GGG | 0.448830 | 8_1:-68490462 | None:intergenic |
TTGAGTAGCAAGAAAGTTGA+TGG | 0.453663 | 8_1:+68494302 | Msa1209860:CDS |
TTTGGTTATGTTCATAGCAA+TGG | 0.454047 | 8_1:+68490734 | Msa1209860:CDS |
CTGAAAATCGCTACTCCATA+GGG | 0.455210 | 8_1:-68490554 | None:intergenic |
GTGTAGAGGGGTGGCAAGAT+TGG | 0.457360 | 8_1:+68494260 | Msa1209860:intron |
GTTGCTTTGTCGTGTGATCA+TGG | 0.459584 | 8_1:+68491004 | Msa1209860:CDS |
CCTGAAAATCGCTACTCCAT+AGG | 0.467324 | 8_1:-68490555 | None:intergenic |
CATGAGAAGGTTGGAGTTGG+AGG | 0.468737 | 8_1:+68491293 | Msa1209860:CDS |
TTTCAGGAATCCTTGTAAAA+CGG | 0.475306 | 8_1:+68490571 | Msa1209860:CDS |
ATCCGAAGCAGATTCGTTTG+TGG | 0.477453 | 8_1:+68490509 | Msa1209860:CDS |
TAATCATTGCATTCGACTCA+TGG | 0.479073 | 8_1:-68494375 | None:intergenic |
GGACATGAGAAGGTTGGAGT+TGG | 0.482722 | 8_1:+68491290 | Msa1209860:intron |
AAATTGGAGGCTGTGCCTGC+AGG | 0.495226 | 8_1:+68491029 | Msa1209860:CDS |
ACGATTCCCGAAGGATAGTT+CGG | 0.498656 | 8_1:+68490456 | Msa1209860:CDS |
ATCAAGAGTAAGACCCAAAA+GGG | 0.501995 | 8_1:+68494343 | Msa1209860:CDS |
CATCAAGAGTAAGACCCAAA+AGG | 0.503977 | 8_1:+68494342 | Msa1209860:CDS |
GGATGCGACACTCTCGCAAT+CGG | 0.504460 | 8_1:-68490426 | None:intergenic |
TTCAAACTTGCTTCCGACAA+AGG | 0.516614 | 8_1:+68491179 | Msa1209860:CDS |
AGTAAGACCCAAAAGGGCTA+TGG | 0.516837 | 8_1:+68494349 | Msa1209860:CDS |
GCGCAAGGGTTGAAACCCTA+TGG | 0.518787 | 8_1:+68490539 | Msa1209860:CDS |
GAATCCTTGTAAAACGGTAA+TGG | 0.521351 | 8_1:+68490577 | Msa1209860:CDS |
CCTTCGGGAATCGTGGCCGC+CGG | 0.528283 | 8_1:-68490447 | None:intergenic |
TAGAGGGGTGGCAAGATTGG+CGG | 0.529568 | 8_1:+68494263 | Msa1209860:intron |
TATCAAATCTTTCAGAGCAA+AGG | 0.540517 | 8_1:+68491610 | Msa1209860:CDS |
CTCCTTGTGAAACTTGGCAA+TGG | 0.542921 | 8_1:-68491405 | None:intergenic |
CAAACGATTCTCCACTTGAA+AGG | 0.543450 | 8_1:+68490771 | Msa1209860:CDS |
TTGCTTTGTCGTGTGATCAT+GGG | 0.546121 | 8_1:+68491005 | Msa1209860:CDS |
GATTGCGAGAGTGTCGCATC+CGG | 0.547181 | 8_1:+68490428 | Msa1209860:CDS |
AGAACTGTTGTTGACGAACA+AGG | 0.547451 | 8_1:+68490969 | Msa1209860:CDS |
AAAGCGCAGAAATCAGAGTC+GGG | 0.547882 | 8_1:-68491352 | None:intergenic |
ATTAACTCGTGCCTTTCAAG+TGG | 0.549624 | 8_1:-68490782 | None:intergenic |
GTTTGTGGTTTAAGTGCGCA+AGG | 0.554303 | 8_1:+68490524 | Msa1209860:CDS |
GCAAGATTGGCGGCGTGAAG+AGG | 0.556892 | 8_1:+68494273 | Msa1209860:CDS |
AATCGCTGATTCATCTTCGC+CGG | 0.558062 | 8_1:-68490402 | None:intergenic |
AGATTGGCGGCGTGAAGAGG+AGG | 0.558782 | 8_1:+68494276 | Msa1209860:CDS |
AATTGCATAAAAGGCGAAGA+CGG | 0.562424 | 8_1:-68491329 | None:intergenic |
GCAATGGAAACAATATCAGA+TGG | 0.571537 | 8_1:-68491389 | None:intergenic |
GAATCATATTCTTCTGAACT+CGG | 0.573273 | 8_1:-68491068 | None:intergenic |
CTGCGTTGATCAGAACCTGC+AGG | 0.581877 | 8_1:-68491044 | None:intergenic |
CGCTGATTCATCTTCGCCGG+CGG | 0.587670 | 8_1:-68490399 | None:intergenic |
TGTGATCATGGGAAAATTGG+AGG | 0.591354 | 8_1:+68491016 | Msa1209860:CDS |
CGGTGGCTAAAATGCGCGGT+GGG | 0.591716 | 8_1:+68490639 | Msa1209860:CDS |
TGCGAGAGTGTCGCATCCGG+CGG | 0.593829 | 8_1:+68490431 | Msa1209860:CDS |
TTCCATTGCCAAGTTTCACA+AGG | 0.602302 | 8_1:+68491403 | Msa1209860:CDS |
TTTGTGGTTTAAGTGCGCAA+GGG | 0.604517 | 8_1:+68490525 | Msa1209860:CDS |
ATGAGAAGGTTGGAGTTGGA+GGG | 0.604737 | 8_1:+68491294 | Msa1209860:CDS |
TTACCGAAACATGATTCCGC+CGG | 0.606830 | 8_1:+68490383 | Msa1209860:CDS |
TGAGATCTTCGCACGTGCGG+TGG | 0.607606 | 8_1:+68490622 | Msa1209860:CDS |
CCGGCGGCCACGATTCCCGA+AGG | 0.617069 | 8_1:+68490447 | Msa1209860:CDS |
ATAGTTCGGAAGACGACGGA+GGG | 0.618356 | 8_1:+68490470 | Msa1209860:CDS |
GATTGGCGGCGTGAAGAGGA+GGG | 0.619432 | 8_1:+68494277 | Msa1209860:CDS |
CGTGCGGTGGCTAAAATGCG+CGG | 0.622389 | 8_1:+68490635 | Msa1209860:CDS |
GAAAGCGCAGAAATCAGAGT+CGG | 0.626070 | 8_1:-68491353 | None:intergenic |
GAACTATCCTTCGGGAATCG+TGG | 0.630182 | 8_1:-68490454 | None:intergenic |
GATAGTTCGGAAGACGACGG+AGG | 0.630672 | 8_1:+68490469 | Msa1209860:CDS |
AATGTGAAACACGTGTGGTA+CGG | 0.653048 | 8_1:+68490668 | Msa1209860:CDS |
GTTTGAGATCTTCGCACGTG+CGG | 0.658246 | 8_1:+68490619 | Msa1209860:CDS |
AAACGGTAATGGCACAAGCG+AGG | 0.659734 | 8_1:+68490588 | Msa1209860:CDS |
GCGGTGGCTAAAATGCGCGG+TGG | 0.662286 | 8_1:+68490638 | Msa1209860:CDS |
AGAAGAATATGATTCTGGAG+TGG | 0.669225 | 8_1:+68491076 | Msa1209860:CDS |
ATGGAAACAATATCAGATGG+AGG | 0.669944 | 8_1:-68491386 | None:intergenic |
ATTGTTGATATTATTCAACA+CGG | 0.694317 | 8_1:+68490710 | Msa1209860:CDS |
ATTGAAACTGTGTAGAGGGG+TGG | 0.704912 | 8_1:+68494251 | Msa1209860:intron |
AAGGATAGTTCGGAAGACGA+CGG | 0.711418 | 8_1:+68490466 | Msa1209860:CDS |
ATGCTAATGTGAAACACGTG+TGG | 0.770185 | 8_1:+68490663 | Msa1209860:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATAATGCTAAATAAAATTT+TGG | + | chr8_1:68491735-68491754 | Msa1209860:intron | 10.0% |
!!! | ATAATGCTAAATAAAATTTT+GGG | + | chr8_1:68491736-68491755 | Msa1209860:intron | 10.0% |
!! | AATTGAAATAAAAAACAAAA+GGG | - | chr8_1:68492075-68492094 | None:intergenic | 10.0% |
!! | AAATTGAAATAAAAAACAAA+AGG | - | chr8_1:68492076-68492095 | None:intergenic | 10.0% |
!!! | ATTTCAATTTTTCAATTAAA+TGG | + | chr8_1:68492086-68492105 | Msa1209860:intron | 10.0% |
!!! | ATTTATTTTTTGTTTTGTTT+GGG | + | chr8_1:68493636-68493655 | Msa1209860:intron | 10.0% |
!! | ATTGTATTAACTTTACTTAA+TGG | + | chr8_1:68490840-68490859 | Msa1209860:intron | 15.0% |
!! | TTACATTTCAATAGAATTTA+GGG | - | chr8_1:68491778-68491797 | None:intergenic | 15.0% |
!!! | TCTAATTTTCTCAAATATTT+AGG | + | chr8_1:68492038-68492057 | Msa1209860:intron | 15.0% |
!! | ATTGAAATAAAAAACAAAAG+GGG | - | chr8_1:68492074-68492093 | None:intergenic | 15.0% |
!!! | TTTTATCATTATAATGAACT+GGG | + | chr8_1:68493053-68493072 | Msa1209860:intron | 15.0% |
!! | TTTCTTTAGTATTTATTGTA+TGG | - | chr8_1:68493533-68493552 | None:intergenic | 15.0% |
!!! | CATTTATTTTTTGTTTTGTT+TGG | + | chr8_1:68493635-68493654 | Msa1209860:intron | 15.0% |
!! | ATTGTTGATATTATTCAACA+CGG | + | chr8_1:68490710-68490729 | Msa1209860:CDS | 20.0% |
!! | ATTAACTTTACTTAATGGTT+AGG | + | chr8_1:68490845-68490864 | Msa1209860:intron | 20.0% |
!! | TTAACTTTACTTAATGGTTA+GGG | + | chr8_1:68490846-68490865 | Msa1209860:intron | 20.0% |
!!! | TTTGTTGTGTTTTTGTTATT+AGG | + | chr8_1:68491231-68491250 | Msa1209860:intron | 20.0% |
!!! | TTGTTGTGTTTTTGTTATTA+GGG | + | chr8_1:68491232-68491251 | Msa1209860:intron | 20.0% |
!!! | GTTTCAGATTATTTTTTGTT+TGG | + | chr8_1:68491260-68491279 | Msa1209860:intron | 20.0% |
!!! | TATTTTTTGTTTGGTTTTGT+AGG | + | chr8_1:68491269-68491288 | Msa1209860:intron | 20.0% |
!! | TACATTTCAATAGAATTTAG+GGG | - | chr8_1:68491777-68491796 | None:intergenic | 20.0% |
!! | GTTACATTTCAATAGAATTT+AGG | - | chr8_1:68491779-68491798 | None:intergenic | 20.0% |
!! | TGCTCATTGAAAAAATAAAT+GGG | - | chr8_1:68491808-68491827 | None:intergenic | 20.0% |
!!! | TAGAAAAGTTGATAAAATTG+AGG | + | chr8_1:68492256-68492275 | Msa1209860:intron | 20.0% |
!! | TCATCCTATTACATAAATAA+AGG | + | chr8_1:68492647-68492666 | Msa1209860:intron | 20.0% |
!! | CATCCTATTACATAAATAAA+GGG | + | chr8_1:68492648-68492667 | Msa1209860:intron | 20.0% |
!! | TTCTTGGAAAATTAGAAAAT+AGG | + | chr8_1:68492894-68492913 | Msa1209860:intron | 20.0% |
!! | ATAAAACGTATTCAAACTAT+TGG | - | chr8_1:68493039-68493058 | None:intergenic | 20.0% |
!!! | GTTTTATCATTATAATGAAC+TGG | + | chr8_1:68493052-68493071 | Msa1209860:intron | 20.0% |
!! | TAACTATAAGACAAATCAAA+TGG | - | chr8_1:68493262-68493281 | None:intergenic | 20.0% |
! | TTGAAACTCATAACATATTC+AGG | - | chr8_1:68491164-68491183 | None:intergenic | 25.0% |
! | TTCTTATCCTGTAAAACAAA+CGG | - | chr8_1:68491524-68491543 | None:intergenic | 25.0% |
! | GTGCTCATTGAAAAAATAAA+TGG | - | chr8_1:68491809-68491828 | None:intergenic | 25.0% |
! | TTTCAAAAGGAAACAATACA+GGG | - | chr8_1:68491934-68491953 | None:intergenic | 25.0% |
!! | TTTTCAAAAGGAAACAATAC+AGG | - | chr8_1:68491935-68491954 | None:intergenic | 25.0% |
!!! | ATGACTTTCAAGTTTTCAAA+AGG | - | chr8_1:68491947-68491966 | None:intergenic | 25.0% |
! | ATTTGAGAAAATTAGACTCT+AGG | - | chr8_1:68492034-68492053 | None:intergenic | 25.0% |
!! | ACACCCTTTATTTATGTAAT+AGG | - | chr8_1:68492654-68492673 | None:intergenic | 25.0% |
! | TTCCCAGTAAAATTAAATTG+AGG | + | chr8_1:68492745-68492764 | Msa1209860:intron | 25.0% |
!!! | CACCTCAATTTAATTTTACT+GGG | - | chr8_1:68492750-68492769 | None:intergenic | 25.0% |
!!! | TGCATATTTTTTGCTTGTTT+TGG | + | chr8_1:68492799-68492818 | Msa1209860:intron | 25.0% |
!! | TTCTAATTTTCCAAGAACAA+TGG | - | chr8_1:68492891-68492910 | None:intergenic | 25.0% |
! | ATTTCATATTTCCATGATCA+TGG | - | chr8_1:68492923-68492942 | None:intergenic | 25.0% |
!! | ATATTTCTTTTCTGTAGAAG+GGG | - | chr8_1:68493195-68493214 | None:intergenic | 25.0% |
!! | CATATTTCTTTTCTGTAGAA+GGG | - | chr8_1:68493196-68493215 | None:intergenic | 25.0% |
!! | TCATATTTCTTTTCTGTAGA+AGG | - | chr8_1:68493197-68493216 | None:intergenic | 25.0% |
!!! | GTAATCTAACGTTTTGTTTT+TGG | - | chr8_1:68493361-68493380 | None:intergenic | 25.0% |
! | TCATGCTTTCTAATCTAATT+AGG | + | chr8_1:68493429-68493448 | Msa1209860:intron | 25.0% |
! | TAAAGAAAGTGATAGAAAAC+TGG | + | chr8_1:68493545-68493564 | Msa1209860:intron | 25.0% |
!!! | TATTTTTTGTTTTGTTTGGG+TGG | + | chr8_1:68493639-68493658 | Msa1209860:intron | 25.0% |
! | GTTAATTGTACTATAGTAGA+AGG | + | chr8_1:68493682-68493701 | Msa1209860:intron | 25.0% |
!!! | TTTCTTTTAAGAATGCAACT+TGG | - | chr8_1:68493796-68493815 | None:intergenic | 25.0% |
! | TTAGTATGGAACTCATAAAT+TGG | - | chr8_1:68493891-68493910 | None:intergenic | 25.0% |
! | CTAGTGTAAACCTTTATTAT+TGG | - | chr8_1:68493986-68494005 | None:intergenic | 25.0% |
! | TAATAAAGGTTTACACTAGA+AGG | + | chr8_1:68493987-68494006 | Msa1209860:intron | 25.0% |
! | AATAAAGGTTTACACTAGAA+GGG | + | chr8_1:68493988-68494007 | Msa1209860:intron | 25.0% |
! | ATAGAGAAAATATATCCCTT+TGG | - | chr8_1:68494111-68494130 | None:intergenic | 25.0% |
!!! | TTTTTCGTTATGTTCTAGTT+TGG | + | chr8_1:68494145-68494164 | Msa1209860:intron | 25.0% |
TGTTTCGGTAAATTGTAGAT+TGG | - | chr8_1:68490374-68490393 | None:intergenic | 30.0% | |
TTTCAGGAATCCTTGTAAAA+CGG | + | chr8_1:68490571-68490590 | Msa1209860:CDS | 30.0% | |
! | GATATTATTCAACACGGTTT+TGG | + | chr8_1:68490716-68490735 | Msa1209860:CDS | 30.0% |
TTTGGTTATGTTCATAGCAA+TGG | + | chr8_1:68490734-68490753 | Msa1209860:CDS | 30.0% | |
GAATCATATTCTTCTGAACT+CGG | - | chr8_1:68491071-68491090 | None:intergenic | 30.0% | |
AGTTCAGAAGAATATGATTC+TGG | + | chr8_1:68491071-68491090 | Msa1209860:CDS | 30.0% | |
CAAAAAGTTAGAAAAGTTGC+AGG | + | chr8_1:68491566-68491585 | Msa1209860:CDS | 30.0% | |
TATCAAATCTTTCAGAGCAA+AGG | + | chr8_1:68491610-68491629 | Msa1209860:CDS | 30.0% | |
TGTTAAGAATTTAGACATGC+TGG | + | chr8_1:68491673-68491692 | Msa1209860:intron | 30.0% | |
TTTCAATAGAATTTAGGGGA+GGG | - | chr8_1:68491773-68491792 | None:intergenic | 30.0% | |
ATTTCAATAGAATTTAGGGG+AGG | - | chr8_1:68491774-68491793 | None:intergenic | 30.0% | |
! | TTTTCCCCCATTTAATCAAA+AGG | - | chr8_1:68491854-68491873 | None:intergenic | 30.0% |
! | TAGAACTCTATTCATGGTTT+TGG | + | chr8_1:68492143-68492162 | Msa1209860:intron | 30.0% |
!!! | TGAGGACAATTGTGTTTTTT+TGG | + | chr8_1:68492274-68492293 | Msa1209860:intron | 30.0% |
!! | AAATAAGGGGTGTTTCTTAT+CGG | + | chr8_1:68492456-68492475 | Msa1209860:intron | 30.0% |
AGAAGAAAATGACTTCTATG+TGG | + | chr8_1:68492509-68492528 | Msa1209860:intron | 30.0% | |
TTTGCTAACACCGTTTATAA+CGG | - | chr8_1:68492613-68492632 | None:intergenic | 30.0% | |
! | TATAAACGGTGTTAGCAAAA+AGG | + | chr8_1:68492614-68492633 | Msa1209860:intron | 30.0% |
TCTTATTAGTGCAAAAACAG+AGG | + | chr8_1:68492675-68492694 | Msa1209860:intron | 30.0% | |
CTTATTAGTGCAAAAACAGA+GGG | + | chr8_1:68492676-68492695 | Msa1209860:intron | 30.0% | |
TTATTAGTGCAAAAACAGAG+GGG | + | chr8_1:68492677-68492696 | Msa1209860:intron | 30.0% | |
TTACATTTCAAGAGACTTCA+AGG | + | chr8_1:68492707-68492726 | Msa1209860:intron | 30.0% | |
TACATTTCAAGAGACTTCAA+GGG | + | chr8_1:68492708-68492727 | Msa1209860:intron | 30.0% | |
!! | GCACCTCAATTTAATTTTAC+TGG | - | chr8_1:68492751-68492770 | None:intergenic | 30.0% |
! | AATTTTCCAAGAACAATGGA+GGG | - | chr8_1:68492887-68492906 | None:intergenic | 30.0% |
! | TAATTTTCCAAGAACAATGG+AGG | - | chr8_1:68492888-68492907 | None:intergenic | 30.0% |
AAAATAGGAATCCATGATCA+TGG | + | chr8_1:68492909-68492928 | Msa1209860:intron | 30.0% | |
TTCCTACTTCTTGATTACTA+TGG | + | chr8_1:68492989-68493008 | Msa1209860:intron | 30.0% | |
TTCCATAGTAATCAAGAAGT+AGG | - | chr8_1:68492994-68493013 | None:intergenic | 30.0% | |
AATGAACTGGGAATAAGAAT+AGG | + | chr8_1:68493065-68493084 | Msa1209860:intron | 30.0% | |
ATGAACTGGGAATAAGAATA+GGG | + | chr8_1:68493066-68493085 | Msa1209860:intron | 30.0% | |
!! | AGTGCTAGTTGATTTTAATG+TGG | + | chr8_1:68493123-68493142 | Msa1209860:intron | 30.0% |
AGATGTTATCTACAACTTTC+TGG | + | chr8_1:68493319-68493338 | Msa1209860:intron | 30.0% | |
ACATGAAAAAGAAACACATG+AGG | - | chr8_1:68493397-68493416 | None:intergenic | 30.0% | |
TTTCAACCTCAATGTAAGTT+TGG | - | chr8_1:68493593-68493612 | None:intergenic | 30.0% | |
GGAATAATGTAATAGCAGAT+AGG | + | chr8_1:68493743-68493762 | Msa1209860:intron | 30.0% | |
ATTCGTTTACAACAATGTGT+TGG | + | chr8_1:68493956-68493975 | Msa1209860:intron | 30.0% | |
! | TGTTGGTAGACCAATAATAA+AGG | + | chr8_1:68493973-68493992 | Msa1209860:intron | 30.0% |
TTATGTTCAAGTCTTACCAA+AGG | + | chr8_1:68494092-68494111 | Msa1209860:intron | 30.0% | |
TATGTTCAAGTCTTACCAAA+GGG | + | chr8_1:68494093-68494112 | Msa1209860:intron | 30.0% | |
! | ATTTAAAGCTCACTCATCTA+GGG | + | chr8_1:68494192-68494211 | Msa1209860:intron | 30.0% |
GAATCCTTGTAAAACGGTAA+TGG | + | chr8_1:68490577-68490596 | Msa1209860:CDS | 35.0% | |
! | TTGTTGACGAACAAGGTTTT+AGG | + | chr8_1:68490976-68490995 | Msa1209860:CDS | 35.0% |
! | AGAAGAATATGATTCTGGAG+TGG | + | chr8_1:68491076-68491095 | Msa1209860:CDS | 35.0% |
CTCCAAACAATGAACTCTTT+GGG | - | chr8_1:68491116-68491135 | None:intergenic | 35.0% | |
ACTCCAAACAATGAACTCTT+TGG | - | chr8_1:68491117-68491136 | None:intergenic | 35.0% | |
CAAGTACACAATACCTTTGT+CGG | - | chr8_1:68491195-68491214 | None:intergenic | 35.0% | |
AATTGCATAAAAGGCGAAGA+CGG | - | chr8_1:68491332-68491351 | None:intergenic | 35.0% | |
ATGGAAACAATATCAGATGG+AGG | - | chr8_1:68491389-68491408 | None:intergenic | 35.0% | |
GCAATGGAAACAATATCAGA+TGG | - | chr8_1:68491392-68491411 | None:intergenic | 35.0% | |
! | CAAGTTTCACAAGGAGTATA+GGG | + | chr8_1:68491412-68491431 | Msa1209860:CDS | 35.0% |
!!! | TGTGTTTCCGTTTGTTTTAC+AGG | + | chr8_1:68491514-68491533 | Msa1209860:intron | 35.0% |
AGGTACTTCTATTCTCTCTT+TGG | + | chr8_1:68491630-68491649 | Msa1209860:intron | 35.0% | |
TTCAATAGAATTTAGGGGAG+GGG | - | chr8_1:68491772-68491791 | None:intergenic | 35.0% | |
!! | TCAGCTGCCTTTTGATTAAA+TGG | + | chr8_1:68491844-68491863 | Msa1209860:intron | 35.0% |
!! | CAGCTGCCTTTTGATTAAAT+GGG | + | chr8_1:68491845-68491864 | Msa1209860:intron | 35.0% |
!! | AGCTGCCTTTTGATTAAATG+GGG | + | chr8_1:68491846-68491865 | Msa1209860:intron | 35.0% |
ACCAACAAAAGCAAACTTCA+GGG | - | chr8_1:68491881-68491900 | None:intergenic | 35.0% | |
TCTTCGTAGAACTCTATTCA+TGG | + | chr8_1:68492137-68492156 | Msa1209860:intron | 35.0% | |
!!! | TCATGGTTTTGGATGATGAA+TGG | + | chr8_1:68492154-68492173 | Msa1209860:intron | 35.0% |
AAGATGACTTGACTTCAATG+TGG | + | chr8_1:68492307-68492326 | Msa1209860:intron | 35.0% | |
TCTTTCTTTATAAGCCGTGT+TGG | + | chr8_1:68492402-68492421 | Msa1209860:intron | 35.0% | |
TGCCACCTATTACACAAATA+AGG | + | chr8_1:68492441-68492460 | Msa1209860:intron | 35.0% | |
GCCACCTATTACACAAATAA+GGG | + | chr8_1:68492442-68492461 | Msa1209860:intron | 35.0% | |
CCACCTATTACACAAATAAG+GGG | + | chr8_1:68492443-68492462 | Msa1209860:intron | 35.0% | |
! | ACACCCCTTATTTGTGTAAT+AGG | - | chr8_1:68492449-68492468 | None:intergenic | 35.0% |
TCTTATCGGTGCAAAAATAG+AGG | + | chr8_1:68492470-68492489 | Msa1209860:intron | 35.0% | |
TCTGTCTCTTCCGTTATAAA+CGG | + | chr8_1:68492600-68492619 | Msa1209860:intron | 35.0% | |
TATTAGTGCAAAAACAGAGG+GGG | + | chr8_1:68492678-68492697 | Msa1209860:intron | 35.0% | |
TGTCGTCATCGAAAAAAGTA+GGG | - | chr8_1:68492779-68492798 | None:intergenic | 35.0% | |
ATGTCGTCATCGAAAAAAGT+AGG | - | chr8_1:68492780-68492799 | None:intergenic | 35.0% | |
! | TGTTATAGCCTTTTCCTACT+AGG | + | chr8_1:68492849-68492868 | Msa1209860:intron | 35.0% |
ATCAAGAAGTAGGAAGAACA+TGG | - | chr8_1:68492984-68493003 | None:intergenic | 35.0% | |
!! | GCTAGTTGATTTTAATGTGG+TGG | + | chr8_1:68493126-68493145 | Msa1209860:intron | 35.0% |
! | TTAATGTGGTGGAAATCACA+TGG | + | chr8_1:68493137-68493156 | Msa1209860:intron | 35.0% |
! | CGTGCTATGGTTTCAAATTT+TGG | - | chr8_1:68493227-68493246 | None:intergenic | 35.0% |
! | GTTATCTACAACTTTCTGGT+AGG | + | chr8_1:68493323-68493342 | Msa1209860:intron | 35.0% |
! | TAAAGCTTGCATGCATTTTC+TGG | - | chr8_1:68493471-68493490 | None:intergenic | 35.0% |
CACTAACCAAACTTACATTG+AGG | + | chr8_1:68493584-68493603 | Msa1209860:intron | 35.0% | |
GAAAACAAGCATGAGAAACA+AGG | + | chr8_1:68493609-68493628 | Msa1209860:intron | 35.0% | |
! | TTCTAGTTAGTTACAGCTAC+TGG | + | chr8_1:68493718-68493737 | Msa1209860:intron | 35.0% |
! | TAGCAGATAGGCTTTTACTA+TGG | + | chr8_1:68493755-68493774 | Msa1209860:intron | 35.0% |
! | AGCAGATAGGCTTTTACTAT+GGG | + | chr8_1:68493756-68493775 | Msa1209860:intron | 35.0% |
TGCGTTCGTTGCAAATAAAT+TGG | + | chr8_1:68493842-68493861 | Msa1209860:intron | 35.0% | |
TGCAAATAAATTGGAAGACC+CGG | + | chr8_1:68493851-68493870 | Msa1209860:intron | 35.0% | |
! | GATTTAAAGCTCACTCATCT+AGG | + | chr8_1:68494191-68494210 | Msa1209860:intron | 35.0% |
! | TTTAAAGCTCACTCATCTAG+GGG | + | chr8_1:68494193-68494212 | Msa1209860:intron | 35.0% |
TGTGTATTGAAACTGTGTAG+AGG | + | chr8_1:68494246-68494265 | Msa1209860:intron | 35.0% | |
GTGTATTGAAACTGTGTAGA+GGG | + | chr8_1:68494247-68494266 | Msa1209860:intron | 35.0% | |
TGTATTGAAACTGTGTAGAG+GGG | + | chr8_1:68494248-68494267 | Msa1209860:intron | 35.0% | |
TTGAGTAGCAAGAAAGTTGA+TGG | + | chr8_1:68494302-68494321 | Msa1209860:CDS | 35.0% | |
ATCAAGAGTAAGACCCAAAA+GGG | + | chr8_1:68494343-68494362 | Msa1209860:CDS | 35.0% | |
AAACGAATCTGCTTCGGATT+AGG | - | chr8_1:68490508-68490527 | None:intergenic | 40.0% | |
AACCACAAACGAATCTGCTT+CGG | - | chr8_1:68490514-68490533 | None:intergenic | 40.0% | |
TTTGTGGTTTAAGTGCGCAA+GGG | + | chr8_1:68490525-68490544 | Msa1209860:CDS | 40.0% | |
CTGAAAATCGCTACTCCATA+GGG | - | chr8_1:68490557-68490576 | None:intergenic | 40.0% | |
!! | TGTGCCATTACCGTTTTACA+AGG | - | chr8_1:68490584-68490603 | None:intergenic | 40.0% |
ATGCTAATGTGAAACACGTG+TGG | + | chr8_1:68490663-68490682 | Msa1209860:CDS | 40.0% | |
AATGTGAAACACGTGTGGTA+CGG | + | chr8_1:68490668-68490687 | Msa1209860:CDS | 40.0% | |
! | CTTTCAAGTGGAGAATCGTT+TGG | - | chr8_1:68490773-68490792 | None:intergenic | 40.0% |
CAAACGATTCTCCACTTGAA+AGG | + | chr8_1:68490771-68490790 | Msa1209860:CDS | 40.0% | |
ATTAACTCGTGCCTTTCAAG+TGG | - | chr8_1:68490785-68490804 | None:intergenic | 40.0% | |
AGAACTGTTGTTGACGAACA+AGG | + | chr8_1:68490969-68490988 | Msa1209860:CDS | 40.0% | |
TTGCTTTGTCGTGTGATCAT+GGG | + | chr8_1:68491005-68491024 | Msa1209860:CDS | 40.0% | |
TCGTGTGATCATGGGAAAAT+TGG | + | chr8_1:68491013-68491032 | Msa1209860:CDS | 40.0% | |
TGTGATCATGGGAAAATTGG+AGG | + | chr8_1:68491016-68491035 | Msa1209860:CDS | 40.0% | |
CTCCCAAAGAGTTCATTGTT+TGG | + | chr8_1:68491111-68491130 | Msa1209860:CDS | 40.0% | |
! | TTCAAACTTGCTTCCGACAA+AGG | + | chr8_1:68491179-68491198 | Msa1209860:CDS | 40.0% |
! | TGTGTACTTGTGTGTTGTTG+TGG | + | chr8_1:68491205-68491224 | Msa1209860:intron | 40.0% |
!!! | TGGTTTTGTAGGACATGAGA+AGG | + | chr8_1:68491280-68491299 | Msa1209860:intron | 40.0% |
TTTGTAGGACATGAGAAGGT+TGG | + | chr8_1:68491284-68491303 | Msa1209860:intron | 40.0% | |
AGAGTCGGGAATTGCATAAA+AGG | - | chr8_1:68491341-68491360 | None:intergenic | 40.0% | |
TTCCATTGCCAAGTTTCACA+AGG | + | chr8_1:68491403-68491422 | Msa1209860:CDS | 40.0% | |
CCTATACTCCTTGTGAAACT+TGG | - | chr8_1:68491414-68491433 | None:intergenic | 40.0% | |
! | CCAAGTTTCACAAGGAGTAT+AGG | + | chr8_1:68491411-68491430 | Msa1209860:CDS | 40.0% |
GGAGTATAGGGTAAGTGTTT+CGG | + | chr8_1:68491424-68491443 | Msa1209860:intron | 40.0% | |
!! | ACTTGGTTTGACTTGGTTGT+GGG | + | chr8_1:68491447-68491466 | Msa1209860:intron | 40.0% |
TCAATAGAATTTAGGGGAGG+GGG | - | chr8_1:68491771-68491790 | None:intergenic | 40.0% | |
!! | GCTGCCTTTTGATTAAATGG+GGG | + | chr8_1:68491847-68491866 | Msa1209860:intron | 40.0% |
!! | ACCCTGAAGTTTGCTTTTGT+TGG | + | chr8_1:68491877-68491896 | Msa1209860:intron | 40.0% |
CACCAACAAAAGCAAACTTC+AGG | - | chr8_1:68491882-68491901 | None:intergenic | 40.0% | |
CTATGCTTCAACGGGAAAAT+AGG | - | chr8_1:68491973-68491992 | None:intergenic | 40.0% | |
AAGCTCTACTATGCTTCAAC+GGG | - | chr8_1:68491981-68492000 | None:intergenic | 40.0% | |
GAAGCTCTACTATGCTTCAA+CGG | - | chr8_1:68491982-68492001 | None:intergenic | 40.0% | |
TGAAGCATAGTAGAGCTTCT+TGG | + | chr8_1:68491983-68492002 | Msa1209860:intron | 40.0% | |
GTCAAGTCATCTTCTTCGAT+CGG | - | chr8_1:68492300-68492319 | None:intergenic | 40.0% | |
TGACTTGACTTCAATGTGGT+TGG | + | chr8_1:68492311-68492330 | Msa1209860:intron | 40.0% | |
! | TTATAAGCCGTGTTGGCAAA+AGG | + | chr8_1:68492409-68492428 | Msa1209860:intron | 40.0% |
! | TATAAGCCGTGTTGGCAAAA+GGG | + | chr8_1:68492410-68492429 | Msa1209860:intron | 40.0% |
! | CCCCTTATTTGTGTAATAGG+TGG | - | chr8_1:68492446-68492465 | None:intergenic | 40.0% |
GAAAATGACTTCTATGTGGC+TGG | + | chr8_1:68492513-68492532 | Msa1209860:intron | 40.0% | |
ATTTCACCCTCCATTGTTCT+TGG | + | chr8_1:68492878-68492897 | Msa1209860:intron | 40.0% | |
CTTGATTACTATGGAAACCC+AGG | + | chr8_1:68492998-68493017 | Msa1209860:intron | 40.0% | |
GGAAGCTAAATAGACATCCT+GGG | - | chr8_1:68493018-68493037 | None:intergenic | 40.0% | |
TGGAAGCTAAATAGACATCC+TGG | - | chr8_1:68493019-68493038 | None:intergenic | 40.0% | |
GGGTTTGAATTGCAAATTGC+AGG | + | chr8_1:68493086-68493105 | Msa1209860:intron | 40.0% | |
GACGAAATCTAAACGTGCTA+TGG | - | chr8_1:68493240-68493259 | None:intergenic | 40.0% | |
ATAGTTCAAAGACACAGGGT+TGG | - | chr8_1:68493293-68493312 | None:intergenic | 40.0% | |
AACCCTGTGTCTTTGAACTA+TGG | + | chr8_1:68493292-68493311 | Msa1209860:intron | 40.0% | |
CTCCATAGTTCAAAGACACA+GGG | - | chr8_1:68493297-68493316 | None:intergenic | 40.0% | |
ACTCCATAGTTCAAAGACAC+AGG | - | chr8_1:68493298-68493317 | None:intergenic | 40.0% | |
!! | CACATGAGGTTTTGTCAAAG+AGG | - | chr8_1:68493383-68493402 | None:intergenic | 40.0% |
AGTTAGTTACAGCTACTGGT+TGG | + | chr8_1:68493722-68493741 | Msa1209860:intron | 40.0% | |
GCAAATAAATTGGAAGACCC+GGG | + | chr8_1:68493852-68493871 | Msa1209860:intron | 40.0% | |
CAAATAAATTGGAAGACCCG+GGG | + | chr8_1:68493853-68493872 | Msa1209860:intron | 40.0% | |
GGAAGAGGTTAGTGTTAGTA+TGG | - | chr8_1:68493905-68493924 | None:intergenic | 40.0% | |
TCCTTCTTCTTGCGAAGAAT+TGG | + | chr8_1:68493922-68493941 | Msa1209860:intron | 40.0% | |
ACCAATTCTTCGCAAGAAGA+AGG | - | chr8_1:68493926-68493945 | None:intergenic | 40.0% | |
TCAAACATTTCCCTACAGAC+AGG | + | chr8_1:68494011-68494030 | Msa1209860:intron | 40.0% | |
CAAACATTTCCCTACAGACA+GGG | + | chr8_1:68494012-68494031 | Msa1209860:intron | 40.0% | |
GGAAATACTGGAGTTGTGAT+AGG | + | chr8_1:68494033-68494052 | Msa1209860:intron | 40.0% | |
ATAGGCAACAACTCAACTCA+TGG | + | chr8_1:68494051-68494070 | Msa1209860:intron | 40.0% | |
TTCTCTATCAAACCAGTGTC+TGG | + | chr8_1:68494168-68494187 | Msa1209860:intron | 40.0% | |
TCTCTATCAAACCAGTGTCT+GGG | + | chr8_1:68494169-68494188 | Msa1209860:intron | 40.0% | |
TTAAAGCTCACTCATCTAGG+GGG | + | chr8_1:68494194-68494213 | Msa1209860:intron | 40.0% | |
CATCAAGAGTAAGACCCAAA+AGG | + | chr8_1:68494342-68494361 | Msa1209860:CDS | 40.0% | |
! | ATGGAATCCATAGCCCTTTT+GGG | - | chr8_1:68494359-68494378 | None:intergenic | 40.0% |
TTACCGAAACATGATTCCGC+CGG | + | chr8_1:68490383-68490402 | Msa1209860:CDS | 45.0% | |
!! | AATCGCTGATTCATCTTCGC+CGG | - | chr8_1:68490405-68490424 | None:intergenic | 45.0% |
ACGATTCCCGAAGGATAGTT+CGG | + | chr8_1:68490456-68490475 | Msa1209860:CDS | 45.0% | |
TCGTCTTCCGAACTATCCTT+CGG | - | chr8_1:68490466-68490485 | None:intergenic | 45.0% | |
AAGGATAGTTCGGAAGACGA+CGG | + | chr8_1:68490466-68490485 | Msa1209860:CDS | 45.0% | |
ATCCGAAGCAGATTCGTTTG+TGG | + | chr8_1:68490509-68490528 | Msa1209860:CDS | 45.0% | |
GTTTGTGGTTTAAGTGCGCA+AGG | + | chr8_1:68490524-68490543 | Msa1209860:CDS | 45.0% | |
CCTGAAAATCGCTACTCCAT+AGG | - | chr8_1:68490558-68490577 | None:intergenic | 45.0% | |
! | CCTATGGAGTAGCGATTTTC+AGG | + | chr8_1:68490555-68490574 | Msa1209860:CDS | 45.0% |
! | GTTGCTTTGTCGTGTGATCA+TGG | + | chr8_1:68491004-68491023 | Msa1209860:CDS | 45.0% |
ATGAGAAGGTTGGAGTTGGA+GGG | + | chr8_1:68491294-68491313 | Msa1209860:CDS | 45.0% | |
AAAGCGCAGAAATCAGAGTC+GGG | - | chr8_1:68491355-68491374 | None:intergenic | 45.0% | |
! | GAAAGCGCAGAAATCAGAGT+CGG | - | chr8_1:68491356-68491375 | None:intergenic | 45.0% |
CTCCTTGTGAAACTTGGCAA+TGG | - | chr8_1:68491408-68491427 | None:intergenic | 45.0% | |
TAGGGTAAGTGTTTCGGACT+TGG | + | chr8_1:68491430-68491449 | Msa1209860:intron | 45.0% | |
! | GTTTCGGACTTGGTTTGACT+TGG | + | chr8_1:68491440-68491459 | Msa1209860:intron | 45.0% |
!! | GACTTGGTTTGACTTGGTTG+TGG | + | chr8_1:68491446-68491465 | Msa1209860:intron | 45.0% |
!! | CTTGGTTTGACTTGGTTGTG+GGG | + | chr8_1:68491448-68491467 | Msa1209860:intron | 45.0% |
!! | GCTGGTCTTTCACTTCACTT+TGG | + | chr8_1:68491691-68491710 | Msa1209860:intron | 45.0% |
TTGACTTCAATGTGGTTGGC+TGG | + | chr8_1:68492315-68492334 | Msa1209860:intron | 45.0% | |
! | TGACTTCAATGTGGTTGGCT+GGG | + | chr8_1:68492316-68492335 | Msa1209860:intron | 45.0% |
ATCGCACACCTAGTAGGAAA+AGG | - | chr8_1:68492860-68492879 | None:intergenic | 45.0% | |
GCAGATTGTCTGATTGAAGC+TGG | + | chr8_1:68492948-68492967 | Msa1209860:intron | 45.0% | |
!! | CATGCAAGCTTTAAGCAAGC+CGG | + | chr8_1:68493478-68493497 | Msa1209860:intron | 45.0% |
AATCATTCCATCCACGTTGC+TGG | - | chr8_1:68493508-68493527 | None:intergenic | 45.0% | |
TCTTCGCAAGAAGAAGGAAG+AGG | - | chr8_1:68493920-68493939 | None:intergenic | 45.0% | |
CCAGTATTTCCCTGTCTGTA+GGG | - | chr8_1:68494024-68494043 | None:intergenic | 45.0% | |
TCCAGTATTTCCCTGTCTGT+AGG | - | chr8_1:68494025-68494044 | None:intergenic | 45.0% | |
!! | GAGCTTTAAATCCCAGACAC+TGG | - | chr8_1:68494183-68494202 | None:intergenic | 45.0% |
TAAAGCTCACTCATCTAGGG+GGG | + | chr8_1:68494195-68494214 | Msa1209860:intron | 45.0% | |
! | TCATCTAGGGGGGTCTTTTA+CGG | + | chr8_1:68494205-68494224 | Msa1209860:intron | 45.0% |
ATTGAAACTGTGTAGAGGGG+TGG | + | chr8_1:68494251-68494270 | Msa1209860:intron | 45.0% | |
AGTAAGACCCAAAAGGGCTA+TGG | + | chr8_1:68494349-68494368 | Msa1209860:CDS | 45.0% | |
! | CATGGAATCCATAGCCCTTT+TGG | - | chr8_1:68494360-68494379 | None:intergenic | 45.0% |
GAACTATCCTTCGGGAATCG+TGG | - | chr8_1:68490457-68490476 | None:intergenic | 50.0% | |
CGTCTTCCGAACTATCCTTC+GGG | - | chr8_1:68490465-68490484 | None:intergenic | 50.0% | |
ATAGTTCGGAAGACGACGGA+GGG | + | chr8_1:68490470-68490489 | Msa1209860:CDS | 50.0% | |
! | AAACGGTAATGGCACAAGCG+AGG | + | chr8_1:68490588-68490607 | Msa1209860:CDS | 50.0% |
! | GTTTGAGATCTTCGCACGTG+CGG | + | chr8_1:68490619-68490638 | Msa1209860:CDS | 50.0% |
GGACATGAGAAGGTTGGAGT+TGG | + | chr8_1:68491290-68491309 | Msa1209860:intron | 50.0% | |
CATGAGAAGGTTGGAGTTGG+AGG | + | chr8_1:68491293-68491312 | Msa1209860:CDS | 50.0% | |
CAAAAGGCAGCTGAAGTCGA+AGG | - | chr8_1:68491838-68491857 | None:intergenic | 50.0% | |
! | AACCAGCCCTTTTGCCAACA+CGG | - | chr8_1:68492419-68492438 | None:intergenic | 50.0% |
ATGACTTCTATGTGGCTGGC+TGG | + | chr8_1:68492517-68492536 | Msa1209860:intron | 50.0% | |
! | TGACTTCTATGTGGCTGGCT+GGG | + | chr8_1:68492518-68492537 | Msa1209860:intron | 50.0% |
GGTGAAATCGCACACCTAGT+AGG | - | chr8_1:68492866-68492885 | None:intergenic | 50.0% | |
CCCTACAGACAGGGAAATAC+TGG | + | chr8_1:68494021-68494040 | Msa1209860:intron | 50.0% | |
! | TAGGGGGGTCTTTTACGGTT+GGG | + | chr8_1:68494210-68494229 | Msa1209860:intron | 50.0% |
! | TTTTACGGTTGGGGCAAGGA+TGG | + | chr8_1:68494220-68494239 | Msa1209860:intron | 50.0% |
TCGCCGGCGGAATCATGTTT+CGG | - | chr8_1:68490389-68490408 | None:intergenic | 55.0% | |
GGATGCGACACTCTCGCAAT+CGG | - | chr8_1:68490429-68490448 | None:intergenic | 55.0% | |
!! | GATTGCGAGAGTGTCGCATC+CGG | + | chr8_1:68490428-68490447 | Msa1209860:CDS | 55.0% |
GATAGTTCGGAAGACGACGG+AGG | + | chr8_1:68490469-68490488 | Msa1209860:CDS | 55.0% | |
GCGCAAGGGTTGAAACCCTA+TGG | + | chr8_1:68490539-68490558 | Msa1209860:CDS | 55.0% | |
AAATTGGAGGCTGTGCCTGC+AGG | + | chr8_1:68491029-68491048 | Msa1209860:CDS | 55.0% | |
! | CTGCGTTGATCAGAACCTGC+AGG | - | chr8_1:68491047-68491066 | None:intergenic | 55.0% |
AAGGCAGCTGAAGTCGAAGG+AGG | - | chr8_1:68491835-68491854 | None:intergenic | 55.0% | |
CATTCCATCCACGTTGCTGG+CGG | - | chr8_1:68493505-68493524 | None:intergenic | 55.0% | |
! | CTAGGGGGGTCTTTTACGGT+TGG | + | chr8_1:68494209-68494228 | Msa1209860:intron | 55.0% |
! | AGGGGGGTCTTTTACGGTTG+GGG | + | chr8_1:68494211-68494230 | Msa1209860:intron | 55.0% |
! | GGTCTTTTACGGTTGGGGCA+AGG | + | chr8_1:68494216-68494235 | Msa1209860:intron | 55.0% |
GTGTAGAGGGGTGGCAAGAT+TGG | + | chr8_1:68494260-68494279 | Msa1209860:intron | 55.0% | |
TAGAGGGGTGGCAAGATTGG+CGG | + | chr8_1:68494263-68494282 | Msa1209860:intron | 55.0% | |
!! | CGCTGATTCATCTTCGCCGG+CGG | - | chr8_1:68490402-68490421 | None:intergenic | 60.0% |
TGAGATCTTCGCACGTGCGG+TGG | + | chr8_1:68490622-68490641 | Msa1209860:CDS | 60.0% | |
CGTGCGGTGGCTAAAATGCG+CGG | + | chr8_1:68490635-68490654 | Msa1209860:CDS | 60.0% | |
CGGTGGCTAAAATGCGCGGT+GGG | + | chr8_1:68490639-68490658 | Msa1209860:CDS | 60.0% | |
! | AGCCGTGTTGGCAAAAGGGC+TGG | + | chr8_1:68492414-68492433 | Msa1209860:intron | 60.0% |
GCAAGATTGGCGGCGTGAAG+AGG | + | chr8_1:68494273-68494292 | Msa1209860:CDS | 60.0% | |
AGATTGGCGGCGTGAAGAGG+AGG | + | chr8_1:68494276-68494295 | Msa1209860:CDS | 60.0% | |
GATTGGCGGCGTGAAGAGGA+GGG | + | chr8_1:68494277-68494296 | Msa1209860:CDS | 60.0% | |
!! | TGCGAGAGTGTCGCATCCGG+CGG | + | chr8_1:68490431-68490450 | Msa1209860:CDS | 65.0% |
GCGGTGGCTAAAATGCGCGG+TGG | + | chr8_1:68490638-68490657 | Msa1209860:CDS | 65.0% | |
CATCCACGTTGCTGGCGGTC+CGG | - | chr8_1:68493500-68493519 | None:intergenic | 65.0% | |
ATTGGACCCTGTCGCTGCCC+CGG | - | chr8_1:68493873-68493892 | None:intergenic | 65.0% | |
CCTTCGGGAATCGTGGCCGC+CGG | - | chr8_1:68490450-68490469 | None:intergenic | 70.0% | |
AAGCCGGACCGCCAGCAACG+TGG | + | chr8_1:68493494-68493513 | Msa1209860:intron | 70.0% | |
CGGACCGCCAGCAACGTGGA+TGG | + | chr8_1:68493498-68493517 | Msa1209860:intron | 70.0% | |
GAAGACCCGGGGCAGCGACA+GGG | + | chr8_1:68493864-68493883 | Msa1209860:intron | 70.0% | |
TTGGACCCTGTCGCTGCCCC+GGG | - | chr8_1:68493872-68493891 | None:intergenic | 70.0% | |
CCGGCGGCCACGATTCCCGA+AGG | + | chr8_1:68490447-68490466 | Msa1209860:CDS | 75.0% | |
GGAAGACCCGGGGCAGCGAC+AGG | + | chr8_1:68493863-68493882 | Msa1209860:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 68490362 | 68494394 | 68490362 | ID=Msa1209860;Name=Msa1209860 |
chr8_1 | mRNA | 68490362 | 68494394 | 68490362 | ID=Msa1209860-mRNA-1;Parent=Msa1209860;Name=Msa1209860-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.5|0.6|0.8|1|1|5|0|347 |
chr8_1 | exon | 68490362 | 68490798 | 68490362 | ID=Msa1209860-mRNA-1:exon:22803;Parent=Msa1209860-mRNA-1 |
chr8_1 | exon | 68490962 | 68491200 | 68490962 | ID=Msa1209860-mRNA-1:exon:22804;Parent=Msa1209860-mRNA-1 |
chr8_1 | exon | 68491291 | 68491433 | 68491291 | ID=Msa1209860-mRNA-1:exon:22805;Parent=Msa1209860-mRNA-1 |
chr8_1 | exon | 68491536 | 68491631 | 68491536 | ID=Msa1209860-mRNA-1:exon:22806;Parent=Msa1209860-mRNA-1 |
chr8_1 | exon | 68494266 | 68494394 | 68494266 | ID=Msa1209860-mRNA-1:exon:22807;Parent=Msa1209860-mRNA-1 |
chr8_1 | CDS | 68490362 | 68490798 | 68490362 | ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1 |
chr8_1 | CDS | 68490962 | 68491200 | 68490962 | ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1 |
chr8_1 | CDS | 68491291 | 68491433 | 68491291 | ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1 |
chr8_1 | CDS | 68491536 | 68491631 | 68491536 | ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1 |
chr8_1 | CDS | 68494266 | 68494394 | 68494266 | ID=Msa1209860-mRNA-1:cds;Parent=Msa1209860-mRNA-1 |
Gene Sequence |
Protein sequence |