AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0403490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0403490 MtrunA17_Chr4g0059061 96.405 306 9 1 1 306 1 304 0.0 608
Msa0403490 MtrunA17_Chr3g0117631 48.852 305 139 5 13 306 15 313 1.09e-96 290
Msa0403490 MtrunA17_Chr8g0380321 37.594 266 152 6 43 299 19 279 3.74e-53 177
Msa0403490 MtrunA17_Chr1g0210871 32.698 315 154 11 46 320 273 569 5.93e-41 150
Msa0403490 MtrunA17_Chr5g0412301 31.229 301 159 9 46 305 266 559 4.40e-36 137
Msa0403490 MtrunA17_Chr5g0410781 35.294 187 106 6 43 220 59 239 5.44e-30 115
Msa0403490 MtrunA17_Chr7g0217951 34.946 186 102 7 46 220 249 426 3.94e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0403490 AT5G62520.1 41.975 243 122 6 68 301 70 302 2.79e-54 181
Msa0403490 AT1G23550.1 37.407 270 150 5 48 305 56 318 1.02e-53 179
Msa0403490 AT3G47720.1 40.891 247 124 6 68 305 78 311 1.96e-51 173
Msa0403490 AT1G70440.2 31.908 304 174 9 15 303 19 304 1.95e-44 155
Msa0403490 AT1G70440.1 31.908 304 174 9 15 303 19 304 1.95e-44 155
Msa0403490 AT1G32230.1 30.702 342 179 10 11 303 235 567 1.96e-39 147
Msa0403490 AT1G32230.3 30.205 341 181 9 11 303 235 566 6.95e-39 145
Msa0403490 AT1G32230.6 30.205 341 181 9 11 303 235 566 1.01e-38 145
Msa0403490 AT1G32230.4 30.205 341 181 9 11 303 235 566 1.01e-38 145
Msa0403490 AT1G32230.2 30.205 341 181 9 11 303 235 566 1.01e-38 145
Msa0403490 AT1G32230.5 30.205 341 181 9 11 303 235 566 1.01e-38 145
Msa0403490 AT5G62520.2 41.975 162 82 5 68 220 70 228 1.00e-32 122
Msa0403490 AT2G35510.1 27.476 313 178 9 38 307 262 568 8.27e-29 117
Msa0403490 AT2G35510.3 27.476 313 178 9 38 307 262 568 8.27e-29 117
Msa0403490 AT2G35510.2 30.526 190 121 5 38 222 262 445 1.28e-23 101

Find 83 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAATCCATAGCCCTTT+TGG 0.255696 3_2:+33737975 None:intergenic
TTGAAACTCATAACATATTC+AGG 0.280626 3_2:+33741168 None:intergenic
GATATTATTCAACACGGTTT+TGG 0.293672 3_2:-33741610 Msa0403490:CDS
ACTCCAAACAATGAACTCTT+TGG 0.300883 3_2:+33741215 None:intergenic
AAACGAATCTGCTTCGGATT+AGG 0.308031 3_2:+33741821 None:intergenic
TCGTGTGATCATGGGAAAAT+TGG 0.321394 3_2:-33741316 Msa0403490:CDS
CCAAGTTTCACAAGGAGTAT+AGG 0.324583 3_2:-33740917 Msa0403490:CDS
CTCCCAAAGAGTTCATTGTT+TGG 0.353473 3_2:-33741218 Msa0403490:CDS
AGAGTCGGGAATTGCATAAA+AGG 0.360107 3_2:+33740990 None:intergenic
CAAGTTTCACAAGGAGTATA+GGG 0.369249 3_2:-33740916 Msa0403490:intron
CCTATACTCCTTGTGAAACT+TGG 0.373522 3_2:+33740917 None:intergenic
AGTTCAGAAGAATATGATTC+TGG 0.386842 3_2:-33741258 Msa0403490:CDS
TTGAGTAGCAAGAAAGTTGA+TGG 0.394627 3_2:-33738030 Msa0403490:CDS
CAAGTACACAATACCTTTGT+CGG 0.414967 3_2:+33741137 None:intergenic
CTCCAAACAATGAACTCTTT+GGG 0.417033 3_2:+33741216 None:intergenic
TCGTCTTCCGAACTATCCTT+CGG 0.427547 3_2:+33741863 None:intergenic
CTTTCAAGTGGAGAATCGTT+TGG 0.428078 3_2:+33741556 None:intergenic
TGTTTCGGTAAATTGTAGAT+TGG 0.431614 3_2:+33741955 None:intergenic
TTTGTAGGACATGAGAAGGT+TGG 0.436670 3_2:-33741044 Msa0403490:intron
AACCACAAACGAATCTGCTT+CGG 0.446185 3_2:+33741815 None:intergenic
TCGCCGGCGGAATCATGTTT+CGG 0.448520 3_2:+33741940 None:intergenic
CGTCTTCCGAACTATCCTTC+GGG 0.448830 3_2:+33741864 None:intergenic
TTTGGTTATGTTCATAGCAA+TGG 0.454047 3_2:-33741592 Msa0403490:CDS
CTGAAAATCGCTACTCCATA+GGG 0.455210 3_2:+33741772 None:intergenic
GTTGCTTTGTCGTGTGATCA+TGG 0.459584 3_2:-33741325 Msa0403490:CDS
CCTGAAAATCGCTACTCCAT+AGG 0.467324 3_2:+33741771 None:intergenic
CATGAGAAGGTTGGAGTTGG+AGG 0.468737 3_2:-33741035 Msa0403490:CDS
TTTCAGGAATCCTTGTAAAA+CGG 0.475306 3_2:-33741755 Msa0403490:CDS
ATCCGAAGCAGATTCGTTTG+TGG 0.477453 3_2:-33741817 Msa0403490:CDS
TAATCATTGCATTCGACTCA+TGG 0.479073 3_2:+33737957 None:intergenic
GGACATGAGAAGGTTGGAGT+TGG 0.482722 3_2:-33741038 Msa0403490:CDS
AAATTGGAGGCTGTGCCTGC+AGG 0.495226 3_2:-33741300 Msa0403490:CDS
ACGATTCCCGAAGGATAGTT+CGG 0.498656 3_2:-33741870 Msa0403490:CDS
ATCAAGAGTAAGACCCAAAA+GGG 0.501995 3_2:-33737989 Msa0403490:CDS
CATCAAGAGTAAGACCCAAA+AGG 0.503977 3_2:-33737990 Msa0403490:CDS
GGATGCGACACTCTCGCAAT+CGG 0.504460 3_2:+33741900 None:intergenic
TTCAAACTTGCTTCCGACAA+AGG 0.516614 3_2:-33741150 Msa0403490:intron
AGTAAGACCCAAAAGGGCTA+TGG 0.516837 3_2:-33737983 Msa0403490:CDS
GCGCAAGGGTTGAAACCCTA+TGG 0.518787 3_2:-33741787 Msa0403490:CDS
GAATCCTTGTAAAACGGTAA+TGG 0.521351 3_2:-33741749 Msa0403490:CDS
CCTTCGGGAATCGTGGCCGC+CGG 0.528283 3_2:+33741879 None:intergenic
TAGAGGGGTGGCAAGATTGA+CGG 0.533513 3_2:-33738069 Msa0403490:CDS
TATCAAATCTTTCAGAGCAA+AGG 0.540517 3_2:-33740718 Msa0403490:intron
CTCCTTGTGAAACTTGGCAA+TGG 0.542921 3_2:+33740923 None:intergenic
CAAACGATTCTCCACTTGAA+AGG 0.543450 3_2:-33741555 Msa0403490:CDS
TTGCTTTGTCGTGTGATCAT+GGG 0.546121 3_2:-33741324 Msa0403490:CDS
GATTGCGAGAGTGTCGCATC+CGG 0.547181 3_2:-33741898 Msa0403490:CDS
AGAACTGTTGTTGACGAACA+AGG 0.547451 3_2:-33741360 Msa0403490:CDS
AAAGCGCAGAAATCAGAGTC+GGG 0.547882 3_2:+33740976 None:intergenic
ATTAACTCGTGCCTTTCAAG+TGG 0.549624 3_2:+33741544 None:intergenic
GTTTGTGGTTTAAGTGCGCA+AGG 0.554303 3_2:-33741802 Msa0403490:CDS
AATCGCTGATTCATCTTCGC+CGG 0.558062 3_2:+33741924 None:intergenic
AATTGCATAAAAGGCGAAGA+CGG 0.562424 3_2:+33740999 None:intergenic
GCAATGGAAACAATATCAGA+TGG 0.571537 3_2:+33740939 None:intergenic
GAATCATATTCTTCTGAACT+CGG 0.573273 3_2:+33741261 None:intergenic
CTGCGTTGATCAGAACCTGC+AGG 0.581877 3_2:+33741285 None:intergenic
AGATTGACGGCGTGAAGAGG+AGG 0.586055 3_2:-33738056 Msa0403490:CDS
GCAAGATTGACGGCGTGAAG+AGG 0.586476 3_2:-33738059 Msa0403490:CDS
CGCTGATTCATCTTCGCCGG+CGG 0.587670 3_2:+33741927 None:intergenic
TGTGATCATGGGAAAATTGG+AGG 0.591354 3_2:-33741313 Msa0403490:CDS
CGGTGGCTAAAATGCGCGGT+GGG 0.591716 3_2:-33741687 Msa0403490:CDS
TGCGAGAGTGTCGCATCCGG+CGG 0.593829 3_2:-33741895 Msa0403490:CDS
TTCCATTGCCAAGTTTCACA+AGG 0.602302 3_2:-33740925 Msa0403490:CDS
TTTGTGGTTTAAGTGCGCAA+GGG 0.604517 3_2:-33741801 Msa0403490:CDS
ATGAGAAGGTTGGAGTTGGA+GGG 0.604737 3_2:-33741034 Msa0403490:CDS
TTACCGAAACATGATTCCGC+CGG 0.606830 3_2:-33741943 Msa0403490:CDS
TGAGATCTTCGCACGTGCGG+TGG 0.607606 3_2:-33741704 Msa0403490:CDS
CCGGCGGCCACGATTCCCGA+AGG 0.617069 3_2:-33741879 Msa0403490:CDS
ATAGTTCGGAAGACGACGGA+GGG 0.618356 3_2:-33741856 Msa0403490:CDS
CGTGCGGTGGCTAAAATGCG+CGG 0.622389 3_2:-33741691 Msa0403490:CDS
GAAAGCGCAGAAATCAGAGT+CGG 0.626070 3_2:+33740975 None:intergenic
GAACTATCCTTCGGGAATCG+TGG 0.630182 3_2:+33741872 None:intergenic
GATAGTTCGGAAGACGACGG+AGG 0.630672 3_2:-33741857 Msa0403490:CDS
AATGTGAAACACGTGTGGTA+CGG 0.653048 3_2:-33741658 Msa0403490:CDS
GTTTGAGATCTTCGCACGTG+CGG 0.658246 3_2:-33741707 Msa0403490:CDS
AAACGGTAATGGCACAAGCG+AGG 0.659734 3_2:-33741738 Msa0403490:CDS
GCGGTGGCTAAAATGCGCGG+TGG 0.662286 3_2:-33741688 Msa0403490:CDS
AGAAGAATATGATTCTGGAG+TGG 0.669225 3_2:-33741253 Msa0403490:CDS
ATGGAAACAATATCAGATGG+AGG 0.669944 3_2:+33740942 None:intergenic
ATTGTTGATATTATTCAACA+CGG 0.694317 3_2:-33741616 Msa0403490:CDS
ATTGAAACTGTGTAGAGGGG+TGG 0.704912 3_2:-33738081 Msa0403490:intron
AAGGATAGTTCGGAAGACGA+CGG 0.711418 3_2:-33741860 Msa0403490:CDS
ATGCTAATGTGAAACACGTG+TGG 0.770185 3_2:-33741663 Msa0403490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATGCTAAATAAAATTT+TGG - chr3_2:33739331-33739350 Msa0403490:intron 10.0%
!!! ATAATGCTAAATAAAATTTT+GGG - chr3_2:33739332-33739351 Msa0403490:intron 10.0%
!!! ATTTCAATTTTTCAATTAAA+TGG - chr3_2:33739676-33739695 Msa0403490:intron 10.0%
!!! ATTTATTTTTTGTTTTGTTT+GGG - chr3_2:33741228-33741247 Msa0403490:CDS 10.0%
!! ATTGAATTAACTTTACTTAA+TGG - chr3_2:33738438-33738457 Msa0403490:intron 15.0%
!!! TTTCAGATTTATTTTTTGTT+TGG - chr3_2:33738856-33738875 Msa0403490:intron 15.0%
!! TTACATTTCAATAGAATTTA+GGG + chr3_2:33739374-33739393 None:intergenic 15.0%
!!! TCTAATTTTCTCAAATATTT+AGG - chr3_2:33739627-33739646 Msa0403490:intron 15.0%
!! AATTGAAATGAAAAAACAAA+CGG + chr3_2:33739665-33739684 None:intergenic 15.0%
!!! TTTTATCATTATAATGAACT+GGG - chr3_2:33740643-33740662 Msa0403490:intron 15.0%
!! TTTCTTTAGTATTTATTGTA+TGG + chr3_2:33741123-33741142 None:intergenic 15.0%
!!! CATTTATTTTTTGTTTTGTT+TGG - chr3_2:33741227-33741246 Msa0403490:CDS 15.0%
!! ATTGTTGATATTATTCAACA+CGG - chr3_2:33738308-33738327 Msa0403490:intron 20.0%
!! ATTAACTTTACTTAATGGTT+AGG - chr3_2:33738443-33738462 Msa0403490:intron 20.0%
!! TTAACTTTACTTAATGGTTA+GGG - chr3_2:33738444-33738463 Msa0403490:intron 20.0%
!!! TTTGTTGTGTTTTTGTTATT+AGG - chr3_2:33738826-33738845 Msa0403490:intron 20.0%
!!! TTGTTGTGTTTTTGTTATTA+GGG - chr3_2:33738827-33738846 Msa0403490:intron 20.0%
!!! TATTTTTTGTTTGGTTTTGT+AGG - chr3_2:33738865-33738884 Msa0403490:intron 20.0%
!! TACATTTCAATAGAATTTAG+GGG + chr3_2:33739373-33739392 None:intergenic 20.0%
!! GTTACATTTCAATAGAATTT+AGG + chr3_2:33739375-33739394 None:intergenic 20.0%
!! TGCTCATTGAAAAAATAAAT+GGG + chr3_2:33739404-33739423 None:intergenic 20.0%
!! ATTGAAATGAAAAAACAAAC+GGG + chr3_2:33739664-33739683 None:intergenic 20.0%
!!! TAGAAAAGTTGATAAAATTG+AGG - chr3_2:33739846-33739865 Msa0403490:intron 20.0%
!! TCATCCTATTACATAAATAA+AGG - chr3_2:33740237-33740256 Msa0403490:intron 20.0%
!! CATCCTATTACATAAATAAA+GGG - chr3_2:33740238-33740257 Msa0403490:intron 20.0%
!! TTCTTGGAAAATTAGAAAAT+AGG - chr3_2:33740484-33740503 Msa0403490:intron 20.0%
!! ATAAAACGTATTCAAACTAT+TGG + chr3_2:33740629-33740648 None:intergenic 20.0%
!!! GTTTTATCATTATAATGAAC+TGG - chr3_2:33740642-33740661 Msa0403490:intron 20.0%
!! TAACTATAAGACAAATCAAA+TGG + chr3_2:33740852-33740871 None:intergenic 20.0%
! TTGAAACTCATAACATATTC+AGG + chr3_2:33738759-33738778 None:intergenic 25.0%
! TTCTTATCCTGTAAAACAAA+CGG + chr3_2:33739120-33739139 None:intergenic 25.0%
! GTGCTCATTGAAAAAATAAA+TGG + chr3_2:33739405-33739424 None:intergenic 25.0%
!! TTTTCCCCTATTTAATCAAA+AGG + chr3_2:33739450-33739469 None:intergenic 25.0%
!! TTTTCAAAAGGAAACAATAC+GGG + chr3_2:33739520-33739539 None:intergenic 25.0%
!! GTTTTCAAAAGGAAACAATA+CGG + chr3_2:33739521-33739540 None:intergenic 25.0%
!!! ATGACTTTCAAGTTTTCAAA+AGG + chr3_2:33739532-33739551 None:intergenic 25.0%
! ATTTGAGAAAATTAGACTCT+AGG + chr3_2:33739623-33739642 None:intergenic 25.0%
! TTGAAATGAAAAAACAAACG+GGG + chr3_2:33739663-33739682 None:intergenic 25.0%
!! ACACCCTTTATTTATGTAAT+AGG + chr3_2:33740244-33740263 None:intergenic 25.0%
! TTCCCAGTAAAATTAAATTG+AGG - chr3_2:33740335-33740354 Msa0403490:intron 25.0%
!!! CACCTCAATTTAATTTTACT+GGG + chr3_2:33740340-33740359 None:intergenic 25.0%
!!! TGCATATTTTTTGCTTGTTT+TGG - chr3_2:33740389-33740408 Msa0403490:intron 25.0%
!! TTCTAATTTTCCAAGAACAA+TGG + chr3_2:33740481-33740500 None:intergenic 25.0%
! ATTTCATATTTCCATGATCA+TGG + chr3_2:33740513-33740532 None:intergenic 25.0%
!! ATATTTCTTTTCTGTAGAAG+GGG + chr3_2:33740785-33740804 None:intergenic 25.0%
!! CATATTTCTTTTCTGTAGAA+GGG + chr3_2:33740786-33740805 None:intergenic 25.0%
!! TCATATTTCTTTTCTGTAGA+AGG + chr3_2:33740787-33740806 None:intergenic 25.0%
!!! GTAATCTAACGTTTTGTTTT+TGG + chr3_2:33740951-33740970 None:intergenic 25.0%
! TCATGCTTTCTAATCTAATT+AGG - chr3_2:33741019-33741038 Msa0403490:CDS 25.0%
! TAAAGAAAGTGATAGAAAAC+TGG - chr3_2:33741135-33741154 Msa0403490:intron 25.0%
!!! TATTTTTTGTTTTGTTTGGG+TGG - chr3_2:33741231-33741250 Msa0403490:CDS 25.0%
! GTTAATTGTACTATAGTAGA+AGG - chr3_2:33741274-33741293 Msa0403490:CDS 25.0%
!!! TTTCTTTTAAGAATGCAACT+TGG + chr3_2:33741388-33741407 None:intergenic 25.0%
! TTAGTATGGAACTCATAAAT+TGG + chr3_2:33741483-33741502 None:intergenic 25.0%
! CTAGTGTAAACCTTTATTAT+TGG + chr3_2:33741578-33741597 None:intergenic 25.0%
! TAATAAAGGTTTACACTAGA+AGG - chr3_2:33741579-33741598 Msa0403490:CDS 25.0%
! AATAAAGGTTTACACTAGAA+GGG - chr3_2:33741580-33741599 Msa0403490:CDS 25.0%
! ATAGAGAAAATAAATCCCTT+TGG + chr3_2:33741703-33741722 None:intergenic 25.0%
!!! TTTTTCGTTATGTTCTAGTT+TGG - chr3_2:33741737-33741756 Msa0403490:CDS 25.0%
TGTTTCGGTAAATTGTAGAT+TGG + chr3_2:33737972-33737991 None:intergenic 30.0%
TTTCAGGAATCCTTGTAAAA+CGG - chr3_2:33738169-33738188 Msa0403490:intron 30.0%
! GATATTATTCAACACGGTTT+TGG - chr3_2:33738314-33738333 Msa0403490:intron 30.0%
TTTGGTTATGTTCATAGCAA+TGG - chr3_2:33738332-33738351 Msa0403490:intron 30.0%
GAATCATATTCTTCTGAACT+CGG + chr3_2:33738666-33738685 None:intergenic 30.0%
AGTTCAGAAGAATATGATTC+TGG - chr3_2:33738666-33738685 Msa0403490:intron 30.0%
CAAAAAGTTAGAAAAGTTGC+AGG - chr3_2:33739162-33739181 Msa0403490:intron 30.0%
TATCAAATCTTTCAGAGCAA+AGG - chr3_2:33739206-33739225 Msa0403490:intron 30.0%
! AGGTATTTCTAATCTCTCTT+TGG - chr3_2:33739226-33739245 Msa0403490:intron 30.0%
TGTTAAGAATTTAGACATGC+TGG - chr3_2:33739269-33739288 Msa0403490:intron 30.0%
TTTCAATAGAATTTAGGGGA+GGG + chr3_2:33739369-33739388 None:intergenic 30.0%
ATTTCAATAGAATTTAGGGG+AGG + chr3_2:33739370-33739389 None:intergenic 30.0%
!! TAGCTGCCTTTTGATTAAAT+AGG - chr3_2:33739441-33739460 Msa0403490:intron 30.0%
!! AGCTGCCTTTTGATTAAATA+GGG - chr3_2:33739442-33739461 Msa0403490:intron 30.0%
! TAGAACTCTATTCATGGTTT+TGG - chr3_2:33739733-33739752 Msa0403490:intron 30.0%
!!! TGAGGACAATTGTGTTTTTT+TGG - chr3_2:33739864-33739883 Msa0403490:intron 30.0%
!! AAATAAGGGGTGTTTCTTAT+CGG - chr3_2:33740046-33740065 Msa0403490:intron 30.0%
AGAAGAAAATGACTTCTATG+TGG - chr3_2:33740099-33740118 Msa0403490:intron 30.0%
TTTGCTAACACCGTTTATAA+CGG + chr3_2:33740203-33740222 None:intergenic 30.0%
! TATAAACGGTGTTAGCAAAA+AGG - chr3_2:33740204-33740223 Msa0403490:intron 30.0%
TCTTATTAGTGCAAAAACAG+AGG - chr3_2:33740265-33740284 Msa0403490:intron 30.0%
CTTATTAGTGCAAAAACAGA+GGG - chr3_2:33740266-33740285 Msa0403490:intron 30.0%
TTATTAGTGCAAAAACAGAG+GGG - chr3_2:33740267-33740286 Msa0403490:intron 30.0%
TTACATTTCAAGAGACTTCA+AGG - chr3_2:33740297-33740316 Msa0403490:intron 30.0%
TACATTTCAAGAGACTTCAA+GGG - chr3_2:33740298-33740317 Msa0403490:intron 30.0%
!! GCACCTCAATTTAATTTTAC+TGG + chr3_2:33740341-33740360 None:intergenic 30.0%
! AATTTTCCAAGAACAATGGA+GGG + chr3_2:33740477-33740496 None:intergenic 30.0%
! TAATTTTCCAAGAACAATGG+AGG + chr3_2:33740478-33740497 None:intergenic 30.0%
AAAATAGGAATCCATGATCA+TGG - chr3_2:33740499-33740518 Msa0403490:intron 30.0%
TTCCTACTTCTTGATTACTA+TGG - chr3_2:33740579-33740598 Msa0403490:intron 30.0%
TTCCATAGTAATCAAGAAGT+AGG + chr3_2:33740584-33740603 None:intergenic 30.0%
AATGAACTGGGAATAAGAAT+AGG - chr3_2:33740655-33740674 Msa0403490:intron 30.0%
ATGAACTGGGAATAAGAATA+GGG - chr3_2:33740656-33740675 Msa0403490:intron 30.0%
!! AGTGCTAGTTGATTTTAATG+TGG - chr3_2:33740713-33740732 Msa0403490:intron 30.0%
AGATGTTATCTACAACTTTC+TGG - chr3_2:33740909-33740928 Msa0403490:intron 30.0%
ACAAGAAAAAGAAACACATG+AGG + chr3_2:33740987-33741006 None:intergenic 30.0%
TTTCAACCTCAATGTAAGTT+TGG + chr3_2:33741185-33741204 None:intergenic 30.0%
GGAATAATGTAATAGCAGAT+AGG - chr3_2:33741335-33741354 Msa0403490:CDS 30.0%
ATTCGTTTACAACAATGTGT+TGG - chr3_2:33741548-33741567 Msa0403490:intron 30.0%
! TGTTGGTAGACCAATAATAA+AGG - chr3_2:33741565-33741584 Msa0403490:CDS 30.0%
TTATGTTCAAGTCTTACCAA+AGG - chr3_2:33741684-33741703 Msa0403490:CDS 30.0%
TATGTTCAAGTCTTACCAAA+GGG - chr3_2:33741685-33741704 Msa0403490:CDS 30.0%
! ATTTAAAGCTCACTCATCTA+GGG - chr3_2:33741784-33741803 Msa0403490:CDS 30.0%
GAATCCTTGTAAAACGGTAA+TGG - chr3_2:33738175-33738194 Msa0403490:intron 35.0%
! TTGTTGACGAACAAGGTTTT+AGG - chr3_2:33738571-33738590 Msa0403490:intron 35.0%
! AGAAGAATATGATTCTGGAG+TGG - chr3_2:33738671-33738690 Msa0403490:intron 35.0%
CTCCAAACAATGAACTCTTT+GGG + chr3_2:33738711-33738730 None:intergenic 35.0%
ACTCCAAACAATGAACTCTT+TGG + chr3_2:33738712-33738731 None:intergenic 35.0%
CAAGTACACAATACCTTTGT+CGG + chr3_2:33738790-33738809 None:intergenic 35.0%
AATTGCATAAAAGGCGAAGA+CGG + chr3_2:33738928-33738947 None:intergenic 35.0%
ATGGAAACAATATCAGATGG+AGG + chr3_2:33738985-33739004 None:intergenic 35.0%
GCAATGGAAACAATATCAGA+TGG + chr3_2:33738988-33739007 None:intergenic 35.0%
! CAAGTTTCACAAGGAGTATA+GGG - chr3_2:33739008-33739027 Msa0403490:intron 35.0%
!!! TGTGTTTCCGTTTGTTTTAC+AGG - chr3_2:33739110-33739129 Msa0403490:intron 35.0%
TTCAATAGAATTTAGGGGAG+GGG + chr3_2:33739368-33739387 None:intergenic 35.0%
!! GCTGCCTTTTGATTAAATAG+GGG - chr3_2:33739443-33739462 Msa0403490:intron 35.0%
!! ATCCTGAAGTTTGCTTTTGT+TGG - chr3_2:33739472-33739491 Msa0403490:intron 35.0%
CTATGCTTCAACTGGAAAAT+AGG + chr3_2:33739558-33739577 None:intergenic 35.0%
TCTTCGTAGAACTCTATTCA+TGG - chr3_2:33739727-33739746 Msa0403490:intron 35.0%
!!! TCATGGTTTTGGATGATGAA+TGG - chr3_2:33739744-33739763 Msa0403490:intron 35.0%
AAGATGACTTGACTTCAATG+TGG - chr3_2:33739897-33739916 Msa0403490:intron 35.0%
TCTTTCTTTATAAGCCGTGT+TGG - chr3_2:33739992-33740011 Msa0403490:intron 35.0%
TGCCACCTATTACACAAATA+AGG - chr3_2:33740031-33740050 Msa0403490:intron 35.0%
GCCACCTATTACACAAATAA+GGG - chr3_2:33740032-33740051 Msa0403490:intron 35.0%
CCACCTATTACACAAATAAG+GGG - chr3_2:33740033-33740052 Msa0403490:intron 35.0%
! ACACCCCTTATTTGTGTAAT+AGG + chr3_2:33740039-33740058 None:intergenic 35.0%
TCTTATCGGTGCAAAAATAG+AGG - chr3_2:33740060-33740079 Msa0403490:intron 35.0%
TCTGTCTCTTCCGTTATAAA+CGG - chr3_2:33740190-33740209 Msa0403490:intron 35.0%
TATTAGTGCAAAAACAGAGG+GGG - chr3_2:33740268-33740287 Msa0403490:intron 35.0%
TGTCGTCATCGAAAAAAGTA+GGG + chr3_2:33740369-33740388 None:intergenic 35.0%
ATGTCGTCATCGAAAAAAGT+AGG + chr3_2:33740370-33740389 None:intergenic 35.0%
ATCAAGAAGTAGGAAGAACA+TGG + chr3_2:33740574-33740593 None:intergenic 35.0%
!! GCTAGTTGATTTTAATGTGG+TGG - chr3_2:33740716-33740735 Msa0403490:intron 35.0%
! TTAATGTGGTGGAAATCACA+TGG - chr3_2:33740727-33740746 Msa0403490:CDS 35.0%
! CGTGCTATGGTTTCAAATTT+TGG + chr3_2:33740817-33740836 None:intergenic 35.0%
! GTTATCTACAACTTTCTGGT+AGG - chr3_2:33740913-33740932 Msa0403490:intron 35.0%
! TAAAGCTTGCATGCATTTTC+TGG + chr3_2:33741061-33741080 None:intergenic 35.0%
CACTAACCAAACTTACATTG+AGG - chr3_2:33741176-33741195 Msa0403490:CDS 35.0%
GAAAACAAGCATGAGAAACA+AGG - chr3_2:33741201-33741220 Msa0403490:CDS 35.0%
! TTCTAGTTAGTTACAGCTAC+TGG - chr3_2:33741310-33741329 Msa0403490:CDS 35.0%
! TAGCAGATAGGCTTTTACTA+TGG - chr3_2:33741347-33741366 Msa0403490:CDS 35.0%
! AGCAGATAGGCTTTTACTAT+GGG - chr3_2:33741348-33741367 Msa0403490:CDS 35.0%
TGCGTTCGTTGCAAATAAAT+TGG - chr3_2:33741434-33741453 Msa0403490:intron 35.0%
TGCAAATAAATTGGAAGACC+CGG - chr3_2:33741443-33741462 Msa0403490:intron 35.0%
! GATTTAAAGCTCACTCATCT+AGG - chr3_2:33741783-33741802 Msa0403490:CDS 35.0%
! TTTAAAGCTCACTCATCTAG+GGG - chr3_2:33741785-33741804 Msa0403490:CDS 35.0%
TGTGTATTGAAACTGTGTAG+AGG - chr3_2:33741838-33741857 Msa0403490:CDS 35.0%
GTGTATTGAAACTGTGTAGA+GGG - chr3_2:33741839-33741858 Msa0403490:CDS 35.0%
TGTATTGAAACTGTGTAGAG+GGG - chr3_2:33741840-33741859 Msa0403490:CDS 35.0%
TTGAGTAGCAAGAAAGTTGA+TGG - chr3_2:33741894-33741913 Msa0403490:CDS 35.0%
ATCAAGAGTAAGACCCAAAA+GGG - chr3_2:33741935-33741954 Msa0403490:CDS 35.0%
AAACGAATCTGCTTCGGATT+AGG + chr3_2:33738106-33738125 None:intergenic 40.0%
AACCACAAACGAATCTGCTT+CGG + chr3_2:33738112-33738131 None:intergenic 40.0%
TTTGTGGTTTAAGTGCGCAA+GGG - chr3_2:33738123-33738142 Msa0403490:intron 40.0%
CTGAAAATCGCTACTCCATA+GGG + chr3_2:33738155-33738174 None:intergenic 40.0%
!! TGTGCCATTACCGTTTTACA+AGG + chr3_2:33738182-33738201 None:intergenic 40.0%
ATGCTAATGTGAAACACGTG+TGG - chr3_2:33738261-33738280 Msa0403490:intron 40.0%
AATGTGAAACACGTGTGGTA+CGG - chr3_2:33738266-33738285 Msa0403490:intron 40.0%
! CTTTCAAGTGGAGAATCGTT+TGG + chr3_2:33738371-33738390 None:intergenic 40.0%
CAAACGATTCTCCACTTGAA+AGG - chr3_2:33738369-33738388 Msa0403490:intron 40.0%
ATTAACTCGTGCCTTTCAAG+TGG + chr3_2:33738383-33738402 None:intergenic 40.0%
AGAACTGTTGTTGACGAACA+AGG - chr3_2:33738564-33738583 Msa0403490:intron 40.0%
TTGCTTTGTCGTGTGATCAT+GGG - chr3_2:33738600-33738619 Msa0403490:intron 40.0%
TCGTGTGATCATGGGAAAAT+TGG - chr3_2:33738608-33738627 Msa0403490:intron 40.0%
TGTGATCATGGGAAAATTGG+AGG - chr3_2:33738611-33738630 Msa0403490:intron 40.0%
CTCCCAAAGAGTTCATTGTT+TGG - chr3_2:33738706-33738725 Msa0403490:intron 40.0%
! TTCAAACTTGCTTCCGACAA+AGG - chr3_2:33738774-33738793 Msa0403490:intron 40.0%
! TGTGTACTTGTGTGTTGTTG+TGG - chr3_2:33738800-33738819 Msa0403490:intron 40.0%
!!! TGGTTTTGTAGGACATGAGA+AGG - chr3_2:33738876-33738895 Msa0403490:intron 40.0%
TTTGTAGGACATGAGAAGGT+TGG - chr3_2:33738880-33738899 Msa0403490:intron 40.0%
AGAGTCGGGAATTGCATAAA+AGG + chr3_2:33738937-33738956 None:intergenic 40.0%
TTCCATTGCCAAGTTTCACA+AGG - chr3_2:33738999-33739018 Msa0403490:intron 40.0%
CCTATACTCCTTGTGAAACT+TGG + chr3_2:33739010-33739029 None:intergenic 40.0%
! CCAAGTTTCACAAGGAGTAT+AGG - chr3_2:33739007-33739026 Msa0403490:intron 40.0%
GGAGTATAGGGTAAGTGTTT+CGG - chr3_2:33739020-33739039 Msa0403490:intron 40.0%
!! ACTTGGTTTGACTTGGTTGT+GGG - chr3_2:33739043-33739062 Msa0403490:intron 40.0%
TCAATAGAATTTAGGGGAGG+GGG + chr3_2:33739367-33739386 None:intergenic 40.0%
CACCAACAAAAGCAAACTTC+AGG + chr3_2:33739477-33739496 None:intergenic 40.0%
AAGCTCTACTATGCTTCAAC+TGG + chr3_2:33739566-33739585 None:intergenic 40.0%
GTCAAGTCATCTTCTTCGAT+CGG + chr3_2:33739890-33739909 None:intergenic 40.0%
TGACTTGACTTCAATGTGGT+TGG - chr3_2:33739901-33739920 Msa0403490:intron 40.0%
! TTATAAGCCGTGTTGGCAAA+AGG - chr3_2:33739999-33740018 Msa0403490:intron 40.0%
! TATAAGCCGTGTTGGCAAAA+GGG - chr3_2:33740000-33740019 Msa0403490:intron 40.0%
! CCCCTTATTTGTGTAATAGG+TGG + chr3_2:33740036-33740055 None:intergenic 40.0%
GAAAATGACTTCTATGTGGC+TGG - chr3_2:33740103-33740122 Msa0403490:intron 40.0%
! TGTGATAGCCTTTTCCTACT+AGG - chr3_2:33740439-33740458 Msa0403490:intron 40.0%
ATTTCACCCTCCATTGTTCT+TGG - chr3_2:33740468-33740487 Msa0403490:intron 40.0%
CTTGATTACTATGGAAACCC+AGG - chr3_2:33740588-33740607 Msa0403490:intron 40.0%
GGAAGCTAAATAGACATCCT+GGG + chr3_2:33740608-33740627 None:intergenic 40.0%
TGGAAGCTAAATAGACATCC+TGG + chr3_2:33740609-33740628 None:intergenic 40.0%
GGGTTTGAATTGCAAATTGC+AGG - chr3_2:33740676-33740695 Msa0403490:intron 40.0%
GACGAAATCTAAACGTGCTA+TGG + chr3_2:33740830-33740849 None:intergenic 40.0%
ATAGTTCAAAGACACAGGGT+TGG + chr3_2:33740883-33740902 None:intergenic 40.0%
AACCCTGTGTCTTTGAACTA+TGG - chr3_2:33740882-33740901 Msa0403490:intron 40.0%
CTCCATAGTTCAAAGACACA+GGG + chr3_2:33740887-33740906 None:intergenic 40.0%
ACTCCATAGTTCAAAGACAC+AGG + chr3_2:33740888-33740907 None:intergenic 40.0%
!! CACATGAGGTTTTGTCAAAG+AGG + chr3_2:33740973-33740992 None:intergenic 40.0%
AGTTAGTTACAGCTACTGGT+TGG - chr3_2:33741314-33741333 Msa0403490:CDS 40.0%
GCAAATAAATTGGAAGACCC+GGG - chr3_2:33741444-33741463 Msa0403490:intron 40.0%
CAAATAAATTGGAAGACCCG+GGG - chr3_2:33741445-33741464 Msa0403490:intron 40.0%
AACTCATAAATTGGACCCTG+TGG + chr3_2:33741474-33741493 None:intergenic 40.0%
GGAAGAGGTTAGTGTTAGTA+TGG + chr3_2:33741497-33741516 None:intergenic 40.0%
TCCTTCTTCTTGCGAAGAAT+TGG - chr3_2:33741514-33741533 Msa0403490:intron 40.0%
ACCAATTCTTCGCAAGAAGA+AGG + chr3_2:33741518-33741537 None:intergenic 40.0%
TCAAACATTTCCCTACAGAC+AGG - chr3_2:33741603-33741622 Msa0403490:CDS 40.0%
CAAACATTTCCCTACAGACA+GGG - chr3_2:33741604-33741623 Msa0403490:CDS 40.0%
GGAAATACTGGAGTTGTGAT+AGG - chr3_2:33741625-33741644 Msa0403490:CDS 40.0%
ATAGGCAACAACTCAACTCA+TGG - chr3_2:33741643-33741662 Msa0403490:CDS 40.0%
TTCTCTATCAAACCAGTGTC+TGG - chr3_2:33741760-33741779 Msa0403490:CDS 40.0%
TCTCTATCAAACCAGTGTCT+GGG - chr3_2:33741761-33741780 Msa0403490:CDS 40.0%
TTAAAGCTCACTCATCTAGG+GGG - chr3_2:33741786-33741805 Msa0403490:CDS 40.0%
CATCAAGAGTAAGACCCAAA+AGG - chr3_2:33741934-33741953 Msa0403490:CDS 40.0%
! ATGGAATCCATAGCCCTTTT+GGG + chr3_2:33741951-33741970 None:intergenic 40.0%
TTACCGAAACATGATTCCGC+CGG - chr3_2:33737981-33738000 Msa0403490:CDS 45.0%
!! AATCGCTGATTCATCTTCGC+CGG + chr3_2:33738003-33738022 None:intergenic 45.0%
ACGATTCCCGAAGGATAGTT+CGG - chr3_2:33738054-33738073 Msa0403490:CDS 45.0%
TCGTCTTCCGAACTATCCTT+CGG + chr3_2:33738064-33738083 None:intergenic 45.0%
AAGGATAGTTCGGAAGACGA+CGG - chr3_2:33738064-33738083 Msa0403490:CDS 45.0%
ATCCGAAGCAGATTCGTTTG+TGG - chr3_2:33738107-33738126 Msa0403490:intron 45.0%
GTTTGTGGTTTAAGTGCGCA+AGG - chr3_2:33738122-33738141 Msa0403490:intron 45.0%
CCTGAAAATCGCTACTCCAT+AGG + chr3_2:33738156-33738175 None:intergenic 45.0%
! CCTATGGAGTAGCGATTTTC+AGG - chr3_2:33738153-33738172 Msa0403490:intron 45.0%
! GTTGCTTTGTCGTGTGATCA+TGG - chr3_2:33738599-33738618 Msa0403490:intron 45.0%
ATGAGAAGGTTGGAGTTGGA+GGG - chr3_2:33738890-33738909 Msa0403490:intron 45.0%
AAAGCGCAGAAATCAGAGTC+GGG + chr3_2:33738951-33738970 None:intergenic 45.0%
! GAAAGCGCAGAAATCAGAGT+CGG + chr3_2:33738952-33738971 None:intergenic 45.0%
CTCCTTGTGAAACTTGGCAA+TGG + chr3_2:33739004-33739023 None:intergenic 45.0%
TAGGGTAAGTGTTTCGGACT+TGG - chr3_2:33739026-33739045 Msa0403490:intron 45.0%
! GTTTCGGACTTGGTTTGACT+TGG - chr3_2:33739036-33739055 Msa0403490:intron 45.0%
!! GACTTGGTTTGACTTGGTTG+TGG - chr3_2:33739042-33739061 Msa0403490:intron 45.0%
!! CTTGGTTTGACTTGGTTGTG+GGG - chr3_2:33739044-33739063 Msa0403490:intron 45.0%
!! GCTGGTCTTTCACTTCACTT+TGG - chr3_2:33739287-33739306 Msa0403490:intron 45.0%
CAATGAGCACAAACCTCCTT+CGG - chr3_2:33739415-33739434 Msa0403490:intron 45.0%
TTGACTTCAATGTGGTTGGC+TGG - chr3_2:33739905-33739924 Msa0403490:intron 45.0%
! TGACTTCAATGTGGTTGGCT+GGG - chr3_2:33739906-33739925 Msa0403490:intron 45.0%
ATCGCACACCTAGTAGGAAA+AGG + chr3_2:33740450-33740469 None:intergenic 45.0%
GCAGATTGTCTGATTGAAGC+TGG - chr3_2:33740538-33740557 Msa0403490:intron 45.0%
!! CATGCAAGCTTTAAGCAAGC+CGG - chr3_2:33741068-33741087 Msa0403490:intron 45.0%
AATCATTCCATCCACGTTGC+TGG + chr3_2:33741098-33741117 None:intergenic 45.0%
TCTTCGCAAGAAGAAGGAAG+AGG + chr3_2:33741512-33741531 None:intergenic 45.0%
CCAGTATTTCCCTGTCTGTA+GGG + chr3_2:33741616-33741635 None:intergenic 45.0%
TCCAGTATTTCCCTGTCTGT+AGG + chr3_2:33741617-33741636 None:intergenic 45.0%
!! GAGCTTTAAATCCCAGACAC+TGG + chr3_2:33741775-33741794 None:intergenic 45.0%
TAAAGCTCACTCATCTAGGG+GGG - chr3_2:33741787-33741806 Msa0403490:CDS 45.0%
! TCATCTAGGGGGGTCTTTTA+CGG - chr3_2:33741797-33741816 Msa0403490:CDS 45.0%
ATTGAAACTGTGTAGAGGGG+TGG - chr3_2:33741843-33741862 Msa0403490:CDS 45.0%
AGTAAGACCCAAAAGGGCTA+TGG - chr3_2:33741941-33741960 Msa0403490:CDS 45.0%
! CATGGAATCCATAGCCCTTT+TGG + chr3_2:33741952-33741971 None:intergenic 45.0%
GAACTATCCTTCGGGAATCG+TGG + chr3_2:33738055-33738074 None:intergenic 50.0%
CGTCTTCCGAACTATCCTTC+GGG + chr3_2:33738063-33738082 None:intergenic 50.0%
ATAGTTCGGAAGACGACGGA+GGG - chr3_2:33738068-33738087 Msa0403490:CDS 50.0%
! AAACGGTAATGGCACAAGCG+AGG - chr3_2:33738186-33738205 Msa0403490:intron 50.0%
! GTTTGAGATCTTCGCACGTG+CGG - chr3_2:33738217-33738236 Msa0403490:intron 50.0%
GGACATGAGAAGGTTGGAGT+TGG - chr3_2:33738886-33738905 Msa0403490:intron 50.0%
CATGAGAAGGTTGGAGTTGG+AGG - chr3_2:33738889-33738908 Msa0403490:intron 50.0%
CAAAAGGCAGCTAAAGCCGA+AGG + chr3_2:33739434-33739453 None:intergenic 50.0%
! AACCAGCCCTTTTGCCAACA+CGG + chr3_2:33740009-33740028 None:intergenic 50.0%
ATGACTTCTATGTGGCTGGC+TGG - chr3_2:33740107-33740126 Msa0403490:intron 50.0%
! TGACTTCTATGTGGCTGGCT+GGG - chr3_2:33740108-33740127 Msa0403490:intron 50.0%
GGTGAAATCGCACACCTAGT+AGG + chr3_2:33740456-33740475 None:intergenic 50.0%
CCCTACAGACAGGGAAATAC+TGG - chr3_2:33741613-33741632 Msa0403490:CDS 50.0%
! TAGGGGGGTCTTTTACGGTT+GGG - chr3_2:33741802-33741821 Msa0403490:CDS 50.0%
! TTTTACGGTTGGGGCAAGGA+TGG - chr3_2:33741812-33741831 Msa0403490:CDS 50.0%
TAGAGGGGTGGCAAGATTGA+CGG - chr3_2:33741855-33741874 Msa0403490:CDS 50.0%
TCGCCGGCGGAATCATGTTT+CGG + chr3_2:33737987-33738006 None:intergenic 55.0%
GGATGCGACACTCTCGCAAT+CGG + chr3_2:33738027-33738046 None:intergenic 55.0%
!! GATTGCGAGAGTGTCGCATC+CGG - chr3_2:33738026-33738045 Msa0403490:CDS 55.0%
GATAGTTCGGAAGACGACGG+AGG - chr3_2:33738067-33738086 Msa0403490:CDS 55.0%
GCGCAAGGGTTGAAACCCTA+TGG - chr3_2:33738137-33738156 Msa0403490:intron 55.0%
AAATTGGAGGCTGTGCCTGC+AGG - chr3_2:33738624-33738643 Msa0403490:intron 55.0%
! CTGCGTTGATCAGAACCTGC+AGG + chr3_2:33738642-33738661 None:intergenic 55.0%
AAGGCAGCTAAAGCCGAAGG+AGG + chr3_2:33739431-33739450 None:intergenic 55.0%
CATTCCATCCACGTTGCTGG+CGG + chr3_2:33741095-33741114 None:intergenic 55.0%
! CTAGGGGGGTCTTTTACGGT+TGG - chr3_2:33741801-33741820 Msa0403490:CDS 55.0%
! AGGGGGGTCTTTTACGGTTG+GGG - chr3_2:33741803-33741822 Msa0403490:CDS 55.0%
! GGTCTTTTACGGTTGGGGCA+AGG - chr3_2:33741808-33741827 Msa0403490:CDS 55.0%
GCAAGATTGACGGCGTGAAG+AGG - chr3_2:33741865-33741884 Msa0403490:CDS 55.0%
AGATTGACGGCGTGAAGAGG+AGG - chr3_2:33741868-33741887 Msa0403490:CDS 55.0%
!! CGCTGATTCATCTTCGCCGG+CGG + chr3_2:33738000-33738019 None:intergenic 60.0%
TGAGATCTTCGCACGTGCGG+TGG - chr3_2:33738220-33738239 Msa0403490:intron 60.0%
CGTGCGGTGGCTAAAATGCG+CGG - chr3_2:33738233-33738252 Msa0403490:intron 60.0%
CGGTGGCTAAAATGCGCGGT+GGG - chr3_2:33738237-33738256 Msa0403490:intron 60.0%
GTGGGGCTTGTGACAGTCAC+TGG - chr3_2:33739061-33739080 Msa0403490:intron 60.0%
! AGCCGTGTTGGCAAAAGGGC+TGG - chr3_2:33740004-33740023 Msa0403490:intron 60.0%
!! TGCGAGAGTGTCGCATCCGG+CGG - chr3_2:33738029-33738048 Msa0403490:CDS 65.0%
GCGGTGGCTAAAATGCGCGG+TGG - chr3_2:33738236-33738255 Msa0403490:intron 65.0%
CATCCACGTTGCTGGCGGTC+CGG + chr3_2:33741090-33741109 None:intergenic 65.0%
ATTGGACCCTGTGGCTGCCC+CGG + chr3_2:33741465-33741484 None:intergenic 65.0%
CCTTCGGGAATCGTGGCCGC+CGG + chr3_2:33738048-33738067 None:intergenic 70.0%
AAGCCGGACCGCCAGCAACG+TGG - chr3_2:33741084-33741103 Msa0403490:intron 70.0%
CGGACCGCCAGCAACGTGGA+TGG - chr3_2:33741088-33741107 Msa0403490:intron 70.0%
GAAGACCCGGGGCAGCCACA+GGG - chr3_2:33741456-33741475 Msa0403490:intron 70.0%
TTGGACCCTGTGGCTGCCCC+GGG + chr3_2:33741464-33741483 None:intergenic 70.0%
CCGGCGGCCACGATTCCCGA+AGG - chr3_2:33738045-33738064 Msa0403490:CDS 75.0%
GGAAGACCCGGGGCAGCCAC+AGG - chr3_2:33741455-33741474 Msa0403490:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 33737960 33741986 33737960 ID=Msa0403490;Name=Msa0403490
chr3_2 mRNA 33737960 33741986 33737960 ID=Msa0403490-mRNA-1;Parent=Msa0403490;Name=Msa0403490-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.5|0.6|0.8|1|1|5|0|347
chr3_2 exon 33741550 33741986 33741550 ID=Msa0403490-mRNA-1:exon:6641;Parent=Msa0403490-mRNA-1
chr3_2 exon 33741151 33741389 33741151 ID=Msa0403490-mRNA-1:exon:6640;Parent=Msa0403490-mRNA-1
chr3_2 exon 33740917 33741059 33740917 ID=Msa0403490-mRNA-1:exon:6639;Parent=Msa0403490-mRNA-1
chr3_2 exon 33740719 33740814 33740719 ID=Msa0403490-mRNA-1:exon:6638;Parent=Msa0403490-mRNA-1
chr3_2 exon 33737960 33738088 33737960 ID=Msa0403490-mRNA-1:exon:6637;Parent=Msa0403490-mRNA-1
chr3_2 CDS 33741550 33741986 33741550 ID=Msa0403490-mRNA-1:cds;Parent=Msa0403490-mRNA-1
chr3_2 CDS 33741151 33741389 33741151 ID=Msa0403490-mRNA-1:cds;Parent=Msa0403490-mRNA-1
chr3_2 CDS 33740917 33741059 33740917 ID=Msa0403490-mRNA-1:cds;Parent=Msa0403490-mRNA-1
chr3_2 CDS 33740719 33740814 33740719 ID=Msa0403490-mRNA-1:cds;Parent=Msa0403490-mRNA-1
chr3_2 CDS 33737960 33738088 33737960 ID=Msa0403490-mRNA-1:cds;Parent=Msa0403490-mRNA-1
Gene Sequence

>Msa0403490

ATGGAACAACCAATCTACAATTTACCGAAACATGATTCCGCCGGCGAAGATGAATCAGCGATTTCCGATTGCGAGAGTGTCGCATCCGGCGGCCACGATTCCCGAAGGATAGTTCGGAAGACGACGGAGGGTGCAGATATCAACCTAATCCGAAGCAGATTCGTTTGTGGTTTAAGTGCGCAAGGGTTGAAACCCTATGGAGTAGCGATTTTCAGGAATCCTTGTAAAACGGTAATGGCACAAGCGAGGATTCAATCGTTTGAGATCTTCGCACGTGCGGTGGCTAAAATGCGCGGTGGGAATGCTAATGTGAAACACGTGTGGTACGGTGCTTCGAGTAGAGAAGAGATTGTTGATATTATTCAACACGGTTTTGGTTATGTTCATAGCAATGGATTGCGTCTTTCTCCAAACGATTCTCCACTTGAAAGGCACGATGTGAAAAGAACTGTTGTTGACGAACAAGGTTTTAGGCACTTGTTGCTTTGTCGTGTGATCATGGGAAAATTGGAGGCTGTGCCTGCAGGTTCTGATCAACGCAGACCGAGTTCAGAAGAATATGATTCTGGAGTGGATAGTTTTTCATCTCCCAAAGAGTTCATTGTTTGGAGTAACAAGATCAACACGCATGTCTTGCCTGAATATGTTATGAGTTTCAAACTTGCTTCCGACAAAGGACATGAGAAGGTTGGAGTTGGAGGGCAACATGTGAGACCGTCTTCGCCTTTTATGCAATTCCCGACTCTGATTTCTGCGCTTTCGAAGATATTGCCTCCATCTGATATTGTTTCCATTGCCAAGTTTCACAAGGAGTATAGGGATAAGAAGATTTCGCGACATGAAATGATACAAAAAGTTAGAAAAGTTGCAGGTGACAAATTGTTGTTTTCTGTTATCAAATCTTTCAGAGCAAAGAGGGGTGGCAAGATTGACGGCGTGAAGAGGAGGAAGTTGAGTAGCAAGAAAGTTGATGGAGCGTATTATAATGAGTCATCAAGAGTAAGACCCAAAAGGGCTATGGATTCCATGAGTCGAATGCAATGA

Protein sequence

>Msa0403490

MEQPIYNLPKHDSAGEDESAISDCESVASGGHDSRRIVRKTTEGADINLIRSRFVCGLSAQGLKPYGVAIFRNPCKTVMAQARIQSFEIFARAVAKMRGGNANVKHVWYGASSREEIVDIIQHGFGYVHSNGLRLSPNDSPLERHDVKRTVVDEQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEYDSGVDSFSSPKEFIVWSNKINTHVLPEYVMSFKLASDKGHEKVGVGGQHVRPSSPFMQFPTLISALSKILPPSDIVSIAKFHKEYRDKKISRHEMIQKVRKVAGDKLLFSVIKSFRAKRGGKIDGVKRRKLSSKKVDGAYYNESSRVRPKRAMDSMSRMQ*