Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947690 | sp|Q0WVH0|RBLOT_ARATH | 49.808 | 520 | 241 | 4 | 189 | 703 | 90 | 594 | 2.59e-174 | 515 |
| Msa0947690 | sp|Q0WVH0|RBLOT_ARATH | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 6.63e-16 | 85.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947690 | A0A072UIM4 | 93.243 | 740 | 29 | 2 | 1 | 740 | 1 | 719 | 0.0 | 1340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070700 | Msa0947690 | 0.807815 | 4.203877e-50 | -8.615850e-47 |
| Msa0115400 | Msa0947690 | 0.809015 | 2.331947e-50 | -8.615850e-47 |
| Msa0605000 | Msa0947690 | 0.816531 | 5.270459e-52 | -8.615850e-47 |
| Msa0685140 | Msa0947690 | 0.818384 | 2.015957e-52 | -8.615850e-47 |
| Msa0715700 | Msa0947690 | 0.809004 | 2.344268e-50 | -8.615850e-47 |
| Msa0772480 | Msa0947690 | 0.812571 | 3.964526e-51 | -8.615850e-47 |
| Msa0798440 | Msa0947690 | 0.802990 | 4.316673e-49 | -8.615850e-47 |
| Msa0137550 | Msa0947690 | 0.802980 | 4.337016e-49 | -8.615850e-47 |
| Msa0411430 | Msa0947690 | 0.812650 | 3.810705e-51 | -8.615850e-47 |
| Msa0309750 | Msa0947690 | 0.838480 | 2.804254e-57 | -8.615850e-47 |
| Msa0542090 | Msa0947690 | 0.831440 | 1.667648e-55 | -8.615850e-47 |
| Msa0542130 | Msa0947690 | 0.829448 | 5.119715e-55 | -8.615850e-47 |
| Msa0945440 | Msa0947690 | 0.833778 | 4.385010e-56 | -8.615850e-47 |
| Msa0947690 | Msa1009820 | 0.808761 | 2.641922e-50 | -8.615850e-47 |
| Msa0947690 | Msa1051200 | 0.824378 | 8.338954e-54 | -8.615850e-47 |
| Msa0947690 | Msa1137700 | 0.807738 | 4.364804e-50 | -8.615850e-47 |
| Msa0947690 | Msa1153060 | 0.831746 | 1.401370e-55 | -8.615850e-47 |
| Msa0947690 | Msa1181250 | 0.815549 | 8.732287e-52 | -8.615850e-47 |
| Msa0947690 | Msa1181330 | 0.813633 | 2.318617e-51 | -8.615850e-47 |
| Msa0947690 | Msa1392780 | 0.811700 | 6.139251e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947690 | MtrunA17_Chr6g0462181 | 93.243 | 740 | 29 | 2 | 1 | 740 | 1 | 719 | 0.0 | 1340 |
| Msa0947690 | MtrunA17_Chr1g0209711 | 37.014 | 489 | 293 | 6 | 206 | 685 | 113 | 595 | 6.59e-102 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947690 | AT3G55510.1 | 49.808 | 520 | 241 | 4 | 189 | 703 | 90 | 594 | 2.63e-175 | 515 |
| Msa0947690 | AT3G55510.1 | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 6.74e-17 | 85.1 |
| Msa0947690 | AT3G55510.2 | 49.612 | 516 | 240 | 4 | 193 | 703 | 19 | 519 | 1.56e-173 | 508 |
| Msa0947690 | AT2G18220.1 | 36.898 | 561 | 328 | 10 | 139 | 685 | 63 | 611 | 9.95e-113 | 359 |
Find 138 sgRNAs with CRISPR-Local
Find 453 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTGCTCTCCTCTTTCC+TGG | 0.215440 | 6_3:-30826559 | Msa0947690:CDS |
| ACATCAACTGTATTGATCTT+TGG | 0.228425 | 6_3:-30826657 | Msa0947690:CDS |
| TGAACCTTTGTCTACCATTA+AGG | 0.244522 | 6_3:-30826380 | Msa0947690:intron |
| AATCACCGAATGGGAAAATT+AGG | 0.245090 | 6_3:-30830943 | Msa0947690:exon |
| TTCAAAGAAGGAAGCTGTTT+TGG | 0.258857 | 6_3:-30827757 | Msa0947690:CDS |
| AATGACAACCCTACTGATTC+TGG | 0.275895 | 6_3:-30824169 | Msa0947690:CDS |
| ACGAACTTTGTTTCGTTCAT+TGG | 0.277127 | 6_3:-30824025 | Msa0947690:three_prime_UTR |
| TGCAGATTTGTGTTGATCTC+TGG | 0.287539 | 6_3:-30827069 | Msa0947690:intron |
| GATGGCAACCCTACTGATTC+TGG | 0.291193 | 6_3:-30824229 | Msa0947690:CDS |
| CATCAACTGTATTGATCTTT+GGG | 0.292979 | 6_3:-30826656 | Msa0947690:CDS |
| ACTTTGTTGTACCTTACTTT+AGG | 0.303870 | 6_3:-30824072 | Msa0947690:three_prime_UTR |
| ATGATTGCTCAAATTATAAA+TGG | 0.309815 | 6_3:-30826580 | Msa0947690:CDS |
| TGTTGATTCTTTGTGTAAAC+TGG | 0.312952 | 6_3:-30827988 | Msa0947690:CDS |
| CAATGGCTTAATCGACTTGC+CGG | 0.322683 | 6_3:-30826502 | Msa0947690:CDS |
| TCTTGAAATCTACAGTTTCC+AGG | 0.333254 | 6_3:-30829361 | Msa0947690:intron |
| ATCATCACTTCCGGTAATAT+CGG | 0.341033 | 6_3:+30829698 | None:intergenic |
| CCTCTTTGTAATCGCTTTCC+TGG | 0.344651 | 6_3:+30824530 | None:intergenic |
| TGTGTTGATCTCTGGGTAAC+AGG | 0.347751 | 6_3:-30827061 | Msa0947690:CDS |
| CTCTTCTTCTTTCCTTTGCC+CGG | 0.357425 | 6_3:+30824277 | None:intergenic |
| ATCTAAAGAATAAAGCTAAA+TGG | 0.358025 | 6_3:-30827734 | Msa0947690:CDS |
| CGGTTACCTTGAGCCTCTTA+AGG | 0.359472 | 6_3:-30828242 | Msa0947690:CDS |
| CAGAGCTTCAATGATCTTCC+TGG | 0.362022 | 6_3:-30827610 | Msa0947690:CDS |
| TCGTTTGAAACTCTCATTAG+AGG | 0.368893 | 6_3:+30826037 | None:intergenic |
| TAGATGAGACACACTCTTCT+TGG | 0.369973 | 6_3:+30826165 | None:intergenic |
| CATCCAAATGGCGTTGTTGA+TGG | 0.371525 | 6_3:-30824247 | Msa0947690:CDS |
| TCTTTGGGTTGCATTTATAT+CGG | 0.374098 | 6_3:-30826641 | Msa0947690:CDS |
| TCCAGCACGAATGATGTAAC+AGG | 0.376980 | 6_3:+30826460 | None:intergenic |
| TTGCCATCAACAACGCCATT+TGG | 0.380533 | 6_3:+30824244 | None:intergenic |
| AGTTCCTTAGAAAATTTGTA+TGG | 0.392486 | 6_3:+30826912 | None:intergenic |
| TATCAAGCGTTTCATTGATC+AGG | 0.396178 | 6_3:-30826012 | Msa0947690:intron |
| TTTCAAAATTGATGCTCATC+AGG | 0.396873 | 6_3:+30824001 | None:intergenic |
| ATCTGTCGAAACGTTTCTTC+AGG | 0.396937 | 6_3:-30824789 | Msa0947690:intron |
| AGTGGAGCAGTTGCCAGTTC+GGG | 0.399908 | 6_3:+30826089 | None:intergenic |
| TATAGAAATAATTATGATGT+AGG | 0.401223 | 6_3:-30823765 | Msa0947690:three_prime_UTR |
| TCCAGGTTTCCCACCATCCT+TGG | 0.402716 | 6_3:+30826417 | None:intergenic |
| AAGTGGAGCAGTTGCCAGTT+CGG | 0.404608 | 6_3:+30826088 | None:intergenic |
| TCTAGCATTGCCGATATTAC+CGG | 0.413671 | 6_3:-30829708 | Msa0947690:CDS |
| GATATTTGCCACTGAGAGTC+AGG | 0.425527 | 6_3:-30826531 | Msa0947690:CDS |
| TCATGCGCAAGGCTGCTTCC+AGG | 0.425550 | 6_3:-30824548 | Msa0947690:CDS |
| AAGCATTTATGAGACAAGTA+AGG | 0.429744 | 6_3:+30827940 | None:intergenic |
| GAATCCAGATATTCTGTTGT+TGG | 0.430549 | 6_3:-30828273 | Msa0947690:intron |
| ACTAGGAATTGAGCCTTAAG+AGG | 0.431218 | 6_3:+30828229 | None:intergenic |
| CTCTTATTAAGTCGTACTTA+AGG | 0.436483 | 6_3:-30827698 | Msa0947690:CDS |
| AATGATGAAACTGAAGTTCT+TGG | 0.442169 | 6_3:-30830616 | Msa0947690:CDS |
| TACATTCCCTTTCAAACCTA+AGG | 0.448021 | 6_3:+30823952 | None:intergenic |
| TCCTTCTTTGAACTCGAGCT+TGG | 0.450076 | 6_3:+30827768 | None:intergenic |
| TCGACAGATTGCTGATCCTT+CGG | 0.451647 | 6_3:+30824803 | None:intergenic |
| GCAGATTTGTGTTGATCTCT+GGG | 0.452388 | 6_3:-30827068 | Msa0947690:intron |
| CTTAAGTACGACTTAATAAG+AGG | 0.452602 | 6_3:+30827699 | None:intergenic |
| CCCTGTTACATCATTCGTGC+TGG | 0.453632 | 6_3:-30826461 | Msa0947690:CDS |
| TGCTGATCCTTCGGTGAGAA+AGG | 0.460695 | 6_3:+30824812 | None:intergenic |
| GAGTTGCTCTCCTCTTTCCT+GGG | 0.462179 | 6_3:-30826558 | Msa0947690:CDS |
| ACCAAGGATGGTGGGAAACC+TGG | 0.462289 | 6_3:-30826418 | Msa0947690:CDS |
| GATGAAAATCCCACTAGAAC+CGG | 0.462503 | 6_3:+30826483 | None:intergenic |
| ACTCTCAGTGGCAAATATCT+AGG | 0.464919 | 6_3:+30826535 | None:intergenic |
| AGAAGCTTGTGCAGTAAAGA+TGG | 0.468827 | 6_3:+30827579 | None:intergenic |
| GTATCTCGGAGTCGGTGATC+TGG | 0.469276 | 6_3:+30827655 | None:intergenic |
| AAATTTCAAAACCTAAAGTA+AGG | 0.471727 | 6_3:+30824061 | None:intergenic |
| AAATTTGTATGGGCAGATTG+AGG | 0.474241 | 6_3:+30826923 | None:intergenic |
| AATCGACTTGCCGGTTCTAG+TGG | 0.475650 | 6_3:-30826493 | Msa0947690:CDS |
| TTGTCATTAACAACGCCATT+GGG | 0.475957 | 6_3:+30824184 | None:intergenic |
| ATGAGGCTGATAATATGTTT+AGG | 0.479956 | 6_3:-30827806 | Msa0947690:CDS |
| ATTGAACAAATTGAAAGAAA+AGG | 0.479957 | 6_3:-30829483 | Msa0947690:intron |
| TGATCTATGCTGCAGTCTCC+GGG | 0.480216 | 6_3:-30824295 | Msa0947690:intron |
| TGTAAGTCCTTAGGTTTGAA+AGG | 0.486841 | 6_3:-30823959 | Msa0947690:three_prime_UTR |
| TGGTTAATAAAATTTGTAGT+TGG | 0.488967 | 6_3:-30826684 | Msa0947690:CDS |
| GTAAGTCCTTAGGTTTGAAA+GGG | 0.496428 | 6_3:-30823958 | Msa0947690:three_prime_UTR |
| AATTTGTATGGGCAGATTGA+GGG | 0.498650 | 6_3:+30826924 | None:intergenic |
| TTCACTCGTCTGAATGCCGT+TGG | 0.503534 | 6_3:+30827860 | None:intergenic |
| AGATTGAGGGCGACTGATGA+AGG | 0.510523 | 6_3:+30826937 | None:intergenic |
| TTCAAAAGAAAAGCTGCTAA+AGG | 0.512057 | 6_3:-30830847 | Msa0947690:intron |
| CTTGAAATCTACAGTTTCCA+GGG | 0.514226 | 6_3:-30829360 | Msa0947690:intron |
| GTTGTCATTAACAACGCCAT+TGG | 0.514502 | 6_3:+30824183 | None:intergenic |
| AATATCTAGGCCCAGGAAAG+AGG | 0.514834 | 6_3:+30826548 | None:intergenic |
| TAAGACACTGCCACTGTCAC+TGG | 0.515297 | 6_3:+30827884 | None:intergenic |
| AAACCTTAAAATCACCGAAT+GGG | 0.515355 | 6_3:-30830952 | Msa0947690:exon |
| ATGCTCTGAAAGAAGTTCAA+TGG | 0.518879 | 6_3:+30826142 | None:intergenic |
| TCCAAGCTCGAGTTCAAAGA+AGG | 0.520345 | 6_3:-30827769 | Msa0947690:CDS |
| AAGAGAAAGCAGCATCCAAA+TGG | 0.522865 | 6_3:-30824259 | Msa0947690:CDS |
| ACAAAGCAATGACATGCATA+AGG | 0.523663 | 6_3:-30826847 | Msa0947690:CDS |
| TATATCTCGTATCATAAGAA+AGG | 0.523951 | 6_3:+30827015 | None:intergenic |
| TTCTGTTGTTGGTTAGATTG+CGG | 0.525227 | 6_3:-30828262 | Msa0947690:CDS |
| TAATTCTTTCCAGAATCAGT+AGG | 0.531955 | 6_3:+30824160 | None:intergenic |
| TACAATATTACCAAGGATGG+TGG | 0.536875 | 6_3:-30826427 | Msa0947690:CDS |
| TATGTGTAGTTCTAAGTGGT+TGG | 0.537543 | 6_3:-30826987 | Msa0947690:CDS |
| GTAAAGATGGAAATGCAGCC+AGG | 0.543485 | 6_3:+30827592 | None:intergenic |
| ATGCTGCAGTCTCCGGGCAA+AGG | 0.548237 | 6_3:-30824289 | Msa0947690:intron |
| TGAGAGTCAGGTGTATTCAA+TGG | 0.551909 | 6_3:-30826519 | Msa0947690:CDS |
| AGTGGCAAATATCTAGGCCC+AGG | 0.553627 | 6_3:+30826541 | None:intergenic |
| ATCTTCTTAAGGTAGATAAG+TGG | 0.554963 | 6_3:+30826071 | None:intergenic |
| CATCTATGTGTAGTTCTAAG+TGG | 0.557609 | 6_3:-30826991 | Msa0947690:CDS |
| AATTCTTTCCAGAATCAGTA+GGG | 0.559311 | 6_3:+30824161 | None:intergenic |
| TAGTGATGGCTTTCTTGAAG+AGG | 0.565826 | 6_3:-30830578 | Msa0947690:intron |
| ATCGACTTGCCGGTTCTAGT+GGG | 0.568185 | 6_3:-30826492 | Msa0947690:CDS |
| TCTAGGTGACATATTGCTGA+AGG | 0.568267 | 6_3:-30826822 | Msa0947690:CDS |
| GATTGAGAAGGCTAGTATCT+CGG | 0.570076 | 6_3:+30827641 | None:intergenic |
| CCAGTTCGGGAAAAGATACA+TGG | 0.573824 | 6_3:+30826102 | None:intergenic |
| GAAAGGGAATGTAATTCAAG+AGG | 0.574289 | 6_3:-30823942 | Msa0947690:three_prime_UTR |
| TGGAGACGCTGATCAGTGCA+AGG | 0.574915 | 6_3:-30823900 | Msa0947690:three_prime_UTR |
| ATGACATGCATAAGGCGTCT+AGG | 0.578999 | 6_3:-30826839 | Msa0947690:CDS |
| ACAATATTACCAAGGATGGT+GGG | 0.580245 | 6_3:-30826426 | Msa0947690:CDS |
| CAAACCTTAAAATCACCGAA+TGG | 0.581177 | 6_3:-30830953 | Msa0947690:exon |
| TTTACTGCACAAGCTTCTCA+AGG | 0.581430 | 6_3:-30827574 | Msa0947690:intron |
| GCCAGAAATTTAGAAAACCC+TGG | 0.583477 | 6_3:+30829343 | None:intergenic |
| CTACAAAAGCATCATGCGCA+AGG | 0.584364 | 6_3:-30824559 | Msa0947690:CDS |
| GAATACAATATTACCAAGGA+TGG | 0.584476 | 6_3:-30826430 | Msa0947690:CDS |
| GTTCCTTAGAAAATTTGTAT+GGG | 0.585756 | 6_3:+30826913 | None:intergenic |
| TTTATGAGACAAGTAAGGGC+AGG | 0.591247 | 6_3:+30827945 | None:intergenic |
| CTAGGTGACATATTGCTGAA+GGG | 0.596365 | 6_3:-30826821 | Msa0947690:CDS |
| AGCGATTACAAAGAGGAAGA+AGG | 0.596651 | 6_3:-30824523 | Msa0947690:intron |
| TGATGTGCCTTTCTCACCGA+AGG | 0.598845 | 6_3:-30824819 | Msa0947690:CDS |
| TGATGAAAATGCACATACTC+AGG | 0.599371 | 6_3:-30828036 | Msa0947690:CDS |
| GAAAATGCACATACTCAGGT+GGG | 0.599414 | 6_3:-30828032 | Msa0947690:CDS |
| AGCATTTATGAGACAAGTAA+GGG | 0.600705 | 6_3:+30827941 | None:intergenic |
| TAGGTGACATATTGCTGAAG+GGG | 0.605004 | 6_3:-30826820 | Msa0947690:CDS |
| ATTAATGTTCATGCTGAATG+AGG | 0.608326 | 6_3:-30827823 | Msa0947690:CDS |
| AGTGGCAGTGTCTTATCCAA+CGG | 0.610383 | 6_3:-30827876 | Msa0947690:CDS |
| TGAAAATGCACATACTCAGG+TGG | 0.614672 | 6_3:-30828033 | Msa0947690:CDS |
| GATGAAACTGAAGTTCTTGG+TGG | 0.616113 | 6_3:-30830613 | Msa0947690:CDS |
| GTGACATATTGCTGAAGGGG+TGG | 0.621378 | 6_3:-30826817 | Msa0947690:CDS |
| GGTGATGATTCTGATAGTGA+TGG | 0.623236 | 6_3:-30830592 | Msa0947690:CDS |
| GAAATACTAATCTCACAACT+AGG | 0.624171 | 6_3:-30823878 | Msa0947690:three_prime_UTR |
| GAAGGCTAGTATCTCGGAGT+CGG | 0.625280 | 6_3:+30827647 | None:intergenic |
| TCTCGAATACAATATTACCA+AGG | 0.625318 | 6_3:-30826434 | Msa0947690:CDS |
| TGAGCAATCATATACAGCAA+AGG | 0.628610 | 6_3:+30826592 | None:intergenic |
| AAGAAAACGCAACATCCCAA+TGG | 0.631847 | 6_3:-30824199 | Msa0947690:CDS |
| CTTACCTTAATGGTAGACAA+AGG | 0.637847 | 6_3:+30826376 | None:intergenic |
| AGTTATGATGATGAAGACAC+TGG | 0.643215 | 6_3:-30829319 | Msa0947690:CDS |
| ATTGAAGTTCTGAGAGAACG+AGG | 0.645309 | 6_3:+30830976 | None:intergenic |
| ATTGAGCCTTAAGAGGCTCA+AGG | 0.650103 | 6_3:+30828236 | None:intergenic |
| CCAGCACGAATGATGTAACA+GGG | 0.652463 | 6_3:+30826461 | None:intergenic |
| TCTGAAACAACCAGTGACAG+TGG | 0.657127 | 6_3:-30827894 | Msa0947690:CDS |
| CCAGGAAAGCGATTACAAAG+AGG | 0.657622 | 6_3:-30824530 | Msa0947690:CDS |
| TGAATACACCTGACTCTCAG+TGG | 0.664805 | 6_3:+30826523 | None:intergenic |
| TCTGAGTCGACAGATTGAGA+AGG | 0.665264 | 6_3:+30827629 | None:intergenic |
| TAACAGGCTGAGAAACGTAG+TGG | 0.678182 | 6_3:-30824603 | Msa0947690:intron |
| TAAAGAGCATAGCTCCACAA+AGG | 0.691545 | 6_3:+30826889 | None:intergenic |
| TGGTTGTTTCAGAATCACTG+CGG | 0.776626 | 6_3:+30827904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTAATTTTTTAATTT+AGG | - | chr6_3:30824209-30824228 | Msa0947690:CDS | 0.0% |
| !!! | TTTTTTAATTTTTTAATTTA+GGG | - | chr6_3:30824210-30824229 | Msa0947690:CDS | 0.0% |
| !!! | TTTGTAATTTTGATATATTT+AGG | - | chr6_3:30824903-30824922 | Msa0947690:intron | 10.0% |
| !!! | TTGTAATTTTGATATATTTA+GGG | - | chr6_3:30824904-30824923 | Msa0947690:intron | 10.0% |
| !!! | TATTTCTATAATCAATTTTA+AGG | - | chr6_3:30827448-30827467 | Msa0947690:intron | 10.0% |
| !!! | ATTTGGATTTTAATTTTCTT+TGG | + | chr6_3:30823893-30823912 | None:intergenic | 15.0% |
| !!! | ATTAAAAACGGTAATTTTAT+GGG | + | chr6_3:30824252-30824271 | None:intergenic | 15.0% |
| !!! | AATTAAAAACGGTAATTTTA+TGG | + | chr6_3:30824253-30824272 | None:intergenic | 15.0% |
| !! | ATACAAACACTAATTAAAAA+CGG | + | chr6_3:30824264-30824283 | None:intergenic | 15.0% |
| !! | AAAATGAACAAAATTTATGT+TGG | - | chr6_3:30824424-30824443 | Msa0947690:intron | 15.0% |
| !!! | TATATTGATTTTTGACTATA+TGG | - | chr6_3:30825021-30825040 | Msa0947690:intron | 15.0% |
| !! | TAATATTGAAATTGAAAGTA+AGG | - | chr6_3:30825089-30825108 | Msa0947690:intron | 15.0% |
| !! | TAAAACGTTATACATTATAA+AGG | + | chr6_3:30825740-30825759 | None:intergenic | 15.0% |
| !! | ATCATAAAGTTAAGTATTAA+GGG | + | chr6_3:30827558-30827577 | None:intergenic | 15.0% |
| !! | AATCATAAAGTTAAGTATTA+AGG | + | chr6_3:30827559-30827578 | None:intergenic | 15.0% |
| !! | TTCATTTATCTAATATTTCT+TGG | - | chr6_3:30828462-30828481 | Msa0947690:intron | 15.0% |
| !!! | CATGTTTTTAAGTATTTTAA+GGG | - | chr6_3:30828963-30828982 | Msa0947690:intron | 15.0% |
| !!! | GTCATTTCTAAAATTATTAT+CGG | + | chr6_3:30829475-30829494 | None:intergenic | 15.0% |
| !!! | GAACAAAAAAAAAAAAGTTT+TGG | + | chr6_3:30829804-30829823 | None:intergenic | 15.0% |
| !! | TATAGAAATAATTATGATGT+AGG | - | chr6_3:30830994-30831013 | Msa0947690:five_prime_UTR | 15.0% |
| !!! | TTTTTAATTCTAATCTTAGC+CGG | + | chr6_3:30824408-30824427 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTGGTTAATATA+GGG | + | chr6_3:30824746-30824765 | None:intergenic | 20.0% |
| !!! | TTTCTGATTTTGGTTAATAT+AGG | + | chr6_3:30824747-30824766 | None:intergenic | 20.0% |
| !!! | TGTTGCAATTTAGTTTAAAA+TGG | + | chr6_3:30825129-30825148 | None:intergenic | 20.0% |
| !! | ATTGAACAAATTGAAAGAAA+AGG | - | chr6_3:30825276-30825295 | Msa0947690:intron | 20.0% |
| !! | TTCTAATAGTTCATATTAGA+AGG | - | chr6_3:30825545-30825564 | Msa0947690:intron | 20.0% |
| !! | TCTAATAGTTCATATTAGAA+GGG | - | chr6_3:30825546-30825565 | Msa0947690:intron | 20.0% |
| !!! | TTAGTCCTTATTTAATGATT+AGG | - | chr6_3:30825801-30825820 | Msa0947690:intron | 20.0% |
| !! | ATATAAATCACATTCAAAAG+AGG | + | chr6_3:30825920-30825939 | None:intergenic | 20.0% |
| !! | ATCTAAAGAATAAAGCTAAA+TGG | - | chr6_3:30827025-30827044 | Msa0947690:CDS | 20.0% |
| !! | GATAATTTCTGATTATTACA+AGG | + | chr6_3:30827400-30827419 | None:intergenic | 20.0% |
| !! | TGGTTAATAAAATTTGTAGT+TGG | - | chr6_3:30828075-30828094 | Msa0947690:intron | 20.0% |
| !! | ATGATTGCTCAAATTATAAA+TGG | - | chr6_3:30828179-30828198 | Msa0947690:intron | 20.0% |
| !!! | TCAAATTCAAAATTTTTTCC+AGG | + | chr6_3:30828362-30828381 | None:intergenic | 20.0% |
| !!! | AATCATAGAAAAAGTATAGT+TGG | + | chr6_3:30828781-30828800 | None:intergenic | 20.0% |
| !! | AACAAATGTATCAAAATAGA+CGG | + | chr6_3:30828852-30828871 | None:intergenic | 20.0% |
| !!! | GCATGTTTTTAAGTATTTTA+AGG | - | chr6_3:30828962-30828981 | Msa0947690:intron | 20.0% |
| !! | AATAAACTTTACCAAATAGT+AGG | + | chr6_3:30829132-30829151 | None:intergenic | 20.0% |
| !!! | TAAAAAACGCCAATTTTAAT+AGG | + | chr6_3:30829266-30829285 | None:intergenic | 20.0% |
| !! | AAATTTCAAAACCTAAAGTA+AGG | + | chr6_3:30830701-30830720 | None:intergenic | 20.0% |
| !!! | CTTTAGGTTTTGAAATTTAA+CGG | - | chr6_3:30830703-30830722 | Msa0947690:CDS | 20.0% |
| !!! | TTTTTGTTGTTGAATGTAAC+AGG | - | chr6_3:30824008-30824027 | Msa0947690:three_prime_UTR | 25.0% |
| !!! | ATTAGTGTTTTTAGTGTTCT+TGG | - | chr6_3:30824375-30824394 | Msa0947690:intron | 25.0% |
| !!! | TTTTAATTCTAATCTTAGCC+GGG | + | chr6_3:30824407-30824426 | None:intergenic | 25.0% |
| ! | ACAAAATTTATGTTGGATGT+CGG | - | chr6_3:30824431-30824450 | Msa0947690:intron | 25.0% |
| !! | CTACATTAACTATTTCTTCT+CGG | + | chr6_3:30824578-30824597 | None:intergenic | 25.0% |
| !! | ATGATGTGAAGTTGATTTAT+AGG | - | chr6_3:30824611-30824630 | Msa0947690:intron | 25.0% |
| !! | TGATGTGAAGTTGATTTATA+GGG | - | chr6_3:30824612-30824631 | Msa0947690:intron | 25.0% |
| ! | ACTGAAAAATTAGAGAGTAA+AGG | + | chr6_3:30824977-30824996 | None:intergenic | 25.0% |
| !!! | TTACTCTCTAATTTTTCAGT+AGG | - | chr6_3:30824977-30824996 | Msa0947690:intron | 25.0% |
| !! | ATTATTTTCATCATCACTTC+CGG | + | chr6_3:30825073-30825092 | None:intergenic | 25.0% |
| ! | TTATGTGCTAAATAAGATTC+TGG | + | chr6_3:30825341-30825360 | None:intergenic | 25.0% |
| ! | TATTTACATGTTAGAATTCC+CGG | - | chr6_3:30825503-30825522 | Msa0947690:intron | 25.0% |
| !! | ATGTATAACGTTTTATGCTT+TGG | - | chr6_3:30825745-30825764 | Msa0947690:intron | 25.0% |
| ! | CTTGTCCTAATCATTAAATA+AGG | + | chr6_3:30825809-30825828 | None:intergenic | 25.0% |
| ! | CAAGATAGAAAAGATAGAAT+AGG | - | chr6_3:30825864-30825883 | Msa0947690:intron | 25.0% |
| !! | GAACAAAATAGAGGTATAAT+AGG | + | chr6_3:30825943-30825962 | None:intergenic | 25.0% |
| !! | TTCCGTTTTCAAATTTTTAC+CGG | + | chr6_3:30826261-30826280 | None:intergenic | 25.0% |
| ! | TAACAGAAAATACGTAATAG+TGG | + | chr6_3:30827345-30827364 | None:intergenic | 25.0% |
| !!! | CAACACATTTTGATCAAAAT+GGG | + | chr6_3:30827510-30827529 | None:intergenic | 25.0% |
| !!! | TCAACACATTTTGATCAAAA+TGG | + | chr6_3:30827511-30827530 | None:intergenic | 25.0% |
| ! | TATATCTCGTATCATAAGAA+AGG | + | chr6_3:30827747-30827766 | None:intergenic | 25.0% |
| ! | GTTCCTTAGAAAATTTGTAT+GGG | + | chr6_3:30827849-30827868 | None:intergenic | 25.0% |
| ! | AGTTCCTTAGAAAATTTGTA+TGG | + | chr6_3:30827850-30827869 | None:intergenic | 25.0% |
| !!! | TGCTATTTATTTTTCGTGTA+AGG | - | chr6_3:30828010-30828029 | Msa0947690:CDS | 25.0% |
| !! | TTTTCTTTTATCTTATGAGC+AGG | - | chr6_3:30828049-30828068 | Msa0947690:CDS | 25.0% |
| !! | TCATTTTCATCTTACCTTAA+TGG | + | chr6_3:30828396-30828415 | None:intergenic | 25.0% |
| ! | GTAGAGAAAACAAAGTTAAT+CGG | + | chr6_3:30828511-30828530 | None:intergenic | 25.0% |
| !! | TCTTTTCAACTATCTTCTTA+AGG | + | chr6_3:30828702-30828721 | None:intergenic | 25.0% |
| ! | ACAGAAAAAAACATTGTTGT+TGG | + | chr6_3:30828809-30828828 | None:intergenic | 25.0% |
| !! | ATTTAGAAGTATGAGAGATA+CGG | + | chr6_3:30828895-30828914 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGTATTTTAAGGG+CGG | - | chr6_3:30828966-30828985 | Msa0947690:intron | 25.0% |
| ! | TATTTGGTAAAGTTTATTCG+AGG | - | chr6_3:30829134-30829153 | Msa0947690:intron | 25.0% |
| ! | AATACTACAAGTATAGAGTA+TGG | + | chr6_3:30829208-30829227 | None:intergenic | 25.0% |
| ! | TACTTGTAGTATTATCATTC+TGG | - | chr6_3:30829215-30829234 | Msa0947690:intron | 25.0% |
| ! | TATTATCATTCTGGTGATAT+AGG | - | chr6_3:30829224-30829243 | Msa0947690:intron | 25.0% |
| ! | CTGAGTTTACCTATTAAAAT+TGG | - | chr6_3:30829254-30829273 | Msa0947690:intron | 25.0% |
| ! | CAAAAGAATATCTCATATTG+AGG | - | chr6_3:30829603-30829622 | Msa0947690:intron | 25.0% |
| ! | TGGCAATATTAACAATGAAA+CGG | + | chr6_3:30829784-30829803 | None:intergenic | 25.0% |
| !! | TTCTTTTATGAAGCAAACAA+TGG | - | chr6_3:30829821-30829840 | Msa0947690:intron | 25.0% |
| ! | GTGTAGCTAAACTAATTTAT+TGG | - | chr6_3:30830126-30830145 | Msa0947690:intron | 25.0% |
| !!! | ATTTATTGGCTTGATTTAAC+AGG | - | chr6_3:30830140-30830159 | Msa0947690:intron | 25.0% |
| !! | TTGTGTACACTCAAATTTTA+TGG | + | chr6_3:30830327-30830346 | None:intergenic | 25.0% |
| AAACCTTAAAATCACCGAAT+GGG | - | chr6_3:30823807-30823826 | Msa0947690:three_prime_UTR | 30.0% | |
| ! | TCTTTCCTAATTTTCCCATT+CGG | + | chr6_3:30823824-30823843 | None:intergenic | 30.0% |
| ! | AGCAGCTTTTCTTTTGAATT+TGG | + | chr6_3:30823910-30823929 | None:intergenic | 30.0% |
| TTCAAAAGAAAAGCTGCTAA+AGG | - | chr6_3:30823912-30823931 | Msa0947690:three_prime_UTR | 30.0% | |
| GTGACAAATCCTTCAAAAAT+TGG | - | chr6_3:30824074-30824093 | Msa0947690:three_prime_UTR | 30.0% | |
| ! | TCTTCAACACCAATTTTTGA+AGG | + | chr6_3:30824086-30824105 | None:intergenic | 30.0% |
| AATGATGAAACTGAAGTTCT+TGG | - | chr6_3:30824143-30824162 | Msa0947690:exon | 30.0% | |
| CGAGAAGAAATAGTTAATGT+AGG | - | chr6_3:30824576-30824595 | Msa0947690:CDS | 30.0% | |
| !!! | GCTAAATGTCTTGTTGATTT+TGG | - | chr6_3:30824665-30824684 | Msa0947690:intron | 30.0% |
| !!! | TGTCTTGTTGATTTTGGTTT+TGG | - | chr6_3:30824671-30824690 | Msa0947690:intron | 30.0% |
| !!! | GTCTTGTTGATTTTGGTTTT+GGG | - | chr6_3:30824672-30824691 | Msa0947690:intron | 30.0% |
| ! | TTTTTGTGTTTGAATGTGCA+AGG | - | chr6_3:30824705-30824724 | Msa0947690:intron | 30.0% |
| ! | CGATGATGTTTTTCTGATTT+TGG | + | chr6_3:30824757-30824776 | None:intergenic | 30.0% |
| AGTAAAGGAAACACTCATTT+AGG | + | chr6_3:30824962-30824981 | None:intergenic | 30.0% | |
| !! | TGATTTTTGACTATATGGAC+AGG | - | chr6_3:30825026-30825045 | Msa0947690:intron | 30.0% |
| TTAGATTAGATTCTGATGCA+AGG | - | chr6_3:30825171-30825190 | Msa0947690:intron | 30.0% | |
| GAAACTGTGAGTATATTACA+CGG | - | chr6_3:30825479-30825498 | Msa0947690:intron | 30.0% | |
| ! | ATTAGAAGGGCATATATACT+TGG | - | chr6_3:30825559-30825578 | Msa0947690:intron | 30.0% |
| CTTCAAAATGTTTGCTTAAG+TGG | - | chr6_3:30825592-30825611 | Msa0947690:intron | 30.0% | |
| TAATTATTCTACTGAGACTG+AGG | - | chr6_3:30825618-30825637 | Msa0947690:intron | 30.0% | |
| !! | TGTATTTTAGGCATCTCTTA+AGG | - | chr6_3:30825645-30825664 | Msa0947690:intron | 30.0% |
| AGATAACAGTAGACAAAGTA+TGG | - | chr6_3:30825827-30825846 | Msa0947690:intron | 30.0% | |
| !! | CTTTGAGATGAACAAAATAG+AGG | + | chr6_3:30825952-30825971 | None:intergenic | 30.0% |
| CTTTCTTATGTGCATCATTA+GGG | - | chr6_3:30826055-30826074 | Msa0947690:CDS | 30.0% | |
| TCATCAATCACTTTACTCAT+TGG | - | chr6_3:30826105-30826124 | Msa0947690:CDS | 30.0% | |
| CACCGGTAAAAATTTGAAAA+CGG | - | chr6_3:30826256-30826275 | Msa0947690:intron | 30.0% | |
| ! | CTTCTATGTTTGATTTACGA+CGG | - | chr6_3:30826397-30826416 | Msa0947690:CDS | 30.0% |
| ! | TTCTATGTTTGATTTACGAC+GGG | - | chr6_3:30826398-30826417 | Msa0947690:CDS | 30.0% |
| TTCAACATTGTGAACTTACT+AGG | + | chr6_3:30826550-30826569 | None:intergenic | 30.0% | |
| !!! | TTGATGCATTTTTTCTTACG+TGG | - | chr6_3:30826672-30826691 | Msa0947690:CDS | 30.0% |
| !!! | ATTTTTTCTTACGTGGTTCA+GGG | - | chr6_3:30826679-30826698 | Msa0947690:CDS | 30.0% |
| !! | TGTTGATTCTTTGTGTAAAC+TGG | - | chr6_3:30826771-30826790 | Msa0947690:intron | 30.0% |
| AGCATTTATGAGACAAGTAA+GGG | + | chr6_3:30826821-30826840 | None:intergenic | 30.0% | |
| AAGCATTTATGAGACAAGTA+AGG | + | chr6_3:30826822-30826841 | None:intergenic | 30.0% | |
| ATTAATGTTCATGCTGAATG+AGG | - | chr6_3:30826936-30826955 | Msa0947690:CDS | 30.0% | |
| ATGAGGCTGATAATATGTTT+AGG | - | chr6_3:30826953-30826972 | Msa0947690:CDS | 30.0% | |
| CTTAAGTACGACTTAATAAG+AGG | + | chr6_3:30827063-30827082 | None:intergenic | 30.0% | |
| CTCTTATTAAGTCGTACTTA+AGG | - | chr6_3:30827061-30827080 | Msa0947690:CDS | 30.0% | |
| TTTCCTAAGTAATAGTTGCT+TGG | - | chr6_3:30827315-30827334 | Msa0947690:intron | 30.0% | |
| AATCCAAGCAACTATTACTT+AGG | + | chr6_3:30827321-30827340 | None:intergenic | 30.0% | |
| ATTTCTGATTATTACAAGGC+TGG | + | chr6_3:30827396-30827415 | None:intergenic | 30.0% | |
| AGTTAAGTATTAAGGGAATC+TGG | + | chr6_3:30827551-30827570 | None:intergenic | 30.0% | |
| AAAAATTTGAGTGCAAGGTA+AGG | + | chr6_3:30827670-30827689 | None:intergenic | 30.0% | |
| ! | ACATCAACTGTATTGATCTT+TGG | - | chr6_3:30828102-30828121 | Msa0947690:intron | 30.0% |
| ! | CATCAACTGTATTGATCTTT+GGG | - | chr6_3:30828103-30828122 | Msa0947690:intron | 30.0% |
| !! | TCTTTGGGTTGCATTTATAT+CGG | - | chr6_3:30828118-30828137 | Msa0947690:intron | 30.0% |
| TCTCGAATACAATATTACCA+AGG | - | chr6_3:30828325-30828344 | Msa0947690:intron | 30.0% | |
| GAATACAATATTACCAAGGA+TGG | - | chr6_3:30828329-30828348 | Msa0947690:intron | 30.0% | |
| ! | AATATGTGTTGTGGATTAAG+AGG | + | chr6_3:30828488-30828507 | None:intergenic | 30.0% |
| !!! | CTACTGTTTTAATTGACTCT+TGG | - | chr6_3:30828527-30828546 | Msa0947690:intron | 30.0% |
| !! | TTTCAGAGCATTTTTCACAA+TGG | - | chr6_3:30828629-30828648 | Msa0947690:intron | 30.0% |
| ATCTTCTTAAGGTAGATAAG+TGG | + | chr6_3:30828691-30828710 | None:intergenic | 30.0% | |
| TCTCATACTTCTAAATCGAT+CGG | - | chr6_3:30828899-30828918 | Msa0947690:intron | 30.0% | |
| ! | TAACATTTGACGGCATTTTT+AGG | + | chr6_3:30828933-30828952 | None:intergenic | 30.0% |
| CCTATTACACTAACATTTGA+CGG | + | chr6_3:30828943-30828962 | None:intergenic | 30.0% | |
| CATTTCAATGTTGAAATTCC+TGG | + | chr6_3:30829053-30829072 | None:intergenic | 30.0% | |
| AAATGAATGTGAACTGTGAT+AGG | - | chr6_3:30829068-30829087 | Msa0947690:intron | 30.0% | |
| AATGAATGTGAACTGTGATA+GGG | - | chr6_3:30829069-30829088 | Msa0947690:intron | 30.0% | |
| ATTCGAGGAAAAAGAATAAG+AGG | - | chr6_3:30829149-30829168 | Msa0947690:intron | 30.0% | |
| TTCGAGGAAAAAGAATAAGA+GGG | - | chr6_3:30829150-30829169 | Msa0947690:intron | 30.0% | |
| AAAAAGAATAAGAGGGCTTT+GGG | - | chr6_3:30829157-30829176 | Msa0947690:intron | 30.0% | |
| TTCATTGCTTTCAAATAAGC+AGG | - | chr6_3:30829361-30829380 | Msa0947690:intron | 30.0% | |
| CTGAGTAAGTTAAATCAAAC+TGG | - | chr6_3:30829683-30829702 | Msa0947690:CDS | 30.0% | |
| ! | AAATTAGTTTAGCTACACCA+AGG | + | chr6_3:30830124-30830143 | None:intergenic | 30.0% |
| GTCAGAAACACAACATTTAT+AGG | + | chr6_3:30830428-30830447 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCCAGAATCAGTA+GGG | + | chr6_3:30830541-30830560 | None:intergenic | 30.0% |
| ! | TTTTTCTTTCCAGAATCAGT+AGG | + | chr6_3:30830542-30830561 | None:intergenic | 30.0% |
| AATTCTTTCCAGAATCAGTA+GGG | + | chr6_3:30830601-30830620 | None:intergenic | 30.0% | |
| TAATTCTTTCCAGAATCAGT+AGG | + | chr6_3:30830602-30830621 | None:intergenic | 30.0% | |
| ! | ACTTTGTTGTACCTTACTTT+AGG | - | chr6_3:30830687-30830706 | Msa0947690:CDS | 30.0% |
| TTTCAAAATTGATGCTCATC+AGG | + | chr6_3:30830761-30830780 | None:intergenic | 30.0% | |
| !! | AGAGTTTTATGTAAGTCCTT+AGG | - | chr6_3:30830791-30830810 | Msa0947690:intron | 30.0% |
| ! | GTCAAGATTTTGCAACTTTT+TGG | - | chr6_3:30830839-30830858 | Msa0947690:intron | 30.0% |
| GAAATACTAATCTCACAACT+AGG | - | chr6_3:30830881-30830900 | Msa0947690:CDS | 30.0% | |
| ! | TTTGCATTCACTTCAGTTTT+TGG | - | chr6_3:30830920-30830939 | Msa0947690:CDS | 30.0% |
| CAAACCTTAAAATCACCGAA+TGG | - | chr6_3:30823806-30823825 | Msa0947690:three_prime_UTR | 35.0% | |
| !! | TTTCCCATTCGGTGATTTTA+AGG | + | chr6_3:30823813-30823832 | None:intergenic | 35.0% |
| AATCACCGAATGGGAAAATT+AGG | - | chr6_3:30823816-30823835 | Msa0947690:three_prime_UTR | 35.0% | |
| TTGTTGAATGTAACAGGAGA+TGG | - | chr6_3:30824014-30824033 | Msa0947690:three_prime_UTR | 35.0% | |
| CTAACAATATTAGCATTCGC+CGG | + | chr6_3:30824472-30824491 | None:intergenic | 35.0% | |
| GAATGCTAATATTGTTAGGC+TGG | - | chr6_3:30824474-30824493 | Msa0947690:intron | 35.0% | |
| !!! | TGATTTTGGTTTTGGGTGAA+TGG | - | chr6_3:30824679-30824698 | Msa0947690:intron | 35.0% |
| AGTCATTTGATGGAGTAAAC+TGG | + | chr6_3:30824861-30824880 | None:intergenic | 35.0% | |
| TGTGTCTGTTAGTCATTTGA+TGG | + | chr6_3:30824871-30824890 | None:intergenic | 35.0% | |
| ATCATCACTTCCGGTAATAT+CGG | + | chr6_3:30825064-30825083 | None:intergenic | 35.0% | |
| ! | AAGGCTTTTGTAGATGGTAA+TGG | - | chr6_3:30825190-30825209 | Msa0947690:intron | 35.0% |
| CAAGAAAACATAGGACACAA+AGG | + | chr6_3:30825307-30825326 | None:intergenic | 35.0% | |
| ! | CTTTGTGTCCTATGTTTTCT+TGG | - | chr6_3:30825305-30825324 | Msa0947690:intron | 35.0% |
| GAAACCAACCAAGAAAACAT+AGG | + | chr6_3:30825316-30825335 | None:intergenic | 35.0% | |
| TGTGCTAAATAAGATTCTGG+TGG | + | chr6_3:30825338-30825357 | None:intergenic | 35.0% | |
| TCTTGAAATCTACAGTTTCC+AGG | - | chr6_3:30825398-30825417 | Msa0947690:intron | 35.0% | |
| CTTGAAATCTACAGTTTCCA+GGG | - | chr6_3:30825399-30825418 | Msa0947690:intron | 35.0% | |
| ! | TCCAGGGTTTTCTAAATTTC+TGG | - | chr6_3:30825415-30825434 | Msa0947690:intron | 35.0% |
| ! | AGTTATGATGATGAAGACAC+TGG | - | chr6_3:30825440-30825459 | Msa0947690:intron | 35.0% |
| ACGTCAATCAATTATTCACC+GGG | + | chr6_3:30825524-30825543 | None:intergenic | 35.0% | |
| GACGTCAATCAATTATTCAC+CGG | + | chr6_3:30825525-30825544 | None:intergenic | 35.0% | |
| ! | GACTGAGGATTGTGTATTTT+AGG | - | chr6_3:30825633-30825652 | Msa0947690:intron | 35.0% |
| ATTCCAAATTCCAATCTGCT+TGG | - | chr6_3:30825713-30825732 | Msa0947690:intron | 35.0% | |
| TTATAAAGGACCAAGCAGAT+TGG | + | chr6_3:30825726-30825745 | None:intergenic | 35.0% | |
| ! | AGACAAAGTATGGACTTGTT+TGG | - | chr6_3:30825837-30825856 | Msa0947690:intron | 35.0% |
| GTTCATCTCAAAGACATGAT+AGG | - | chr6_3:30825959-30825978 | Msa0947690:intron | 35.0% | |
| CCAACTACTGGATTACAAAT+AGG | + | chr6_3:30826033-30826052 | None:intergenic | 35.0% | |
| CCTATTTGTAATCCAGTAGT+TGG | - | chr6_3:30826030-30826049 | Msa0947690:CDS | 35.0% | |
| GCTTTCTTATGTGCATCATT+AGG | - | chr6_3:30826054-30826073 | Msa0947690:CDS | 35.0% | |
| TCAAACATAGAAGCTAGTAG+TGG | + | chr6_3:30826390-30826409 | None:intergenic | 35.0% | |
| ! | TCTATGTTTGATTTACGACG+GGG | - | chr6_3:30826399-30826418 | Msa0947690:CDS | 35.0% |
| GAATCCAGATATTCTGTTGT+TGG | - | chr6_3:30826486-30826505 | Msa0947690:CDS | 35.0% | |
| CTAACCAACAACAGAATATC+TGG | + | chr6_3:30826493-30826512 | None:intergenic | 35.0% | |
| ! | TTCTGTTGTTGGTTAGATTG+CGG | - | chr6_3:30826497-30826516 | Msa0947690:CDS | 35.0% |
| AAGCTACATGTTGGAAATTG+AGG | + | chr6_3:30826614-30826633 | None:intergenic | 35.0% | |
| GAAAGTTCAAAGCTACATGT+TGG | + | chr6_3:30826623-30826642 | None:intergenic | 35.0% | |
| !! | CATTAACAAAAGTGCTAGTC+AGG | + | chr6_3:30826648-30826667 | None:intergenic | 35.0% |
| !!! | CATTTTTTCTTACGTGGTTC+AGG | - | chr6_3:30826678-30826697 | Msa0947690:CDS | 35.0% |
| TGATGAAAATGCACATACTC+AGG | - | chr6_3:30826723-30826742 | Msa0947690:intron | 35.0% | |
| ! | TTCAAAGAAGGAAGCTGTTT+TGG | - | chr6_3:30827002-30827021 | Msa0947690:CDS | 35.0% |
| ! | ATGCTATGTTTTACAGATGC+TGG | - | chr6_3:30827253-30827272 | Msa0947690:intron | 35.0% |
| TTTACAGATGCTGGTATAGA+TGG | - | chr6_3:30827262-30827281 | Msa0947690:intron | 35.0% | |
| ! | TTTTACACATCTTAGCCAGA+TGG | + | chr6_3:30827620-30827639 | None:intergenic | 35.0% |
| CTGCAAAAAATTTGAGTGCA+AGG | + | chr6_3:30827675-30827694 | None:intergenic | 35.0% | |
| !! | CATCTATGTGTAGTTCTAAG+TGG | - | chr6_3:30827768-30827787 | Msa0947690:CDS | 35.0% |
| !! | TATGTGTAGTTCTAAGTGGT+TGG | - | chr6_3:30827772-30827791 | Msa0947690:CDS | 35.0% |
| AATTTGTATGGGCAGATTGA+GGG | + | chr6_3:30827838-30827857 | None:intergenic | 35.0% | |
| AAATTTGTATGGGCAGATTG+AGG | + | chr6_3:30827839-30827858 | None:intergenic | 35.0% | |
| ! | CTGCCCATACAAATTTTCTA+AGG | - | chr6_3:30827843-30827862 | Msa0947690:CDS | 35.0% |
| !! | TTTTCTAAGGAACTCCTTTG+TGG | - | chr6_3:30827856-30827875 | Msa0947690:CDS | 35.0% |
| ACAAAGCAATGACATGCATA+AGG | - | chr6_3:30827912-30827931 | Msa0947690:CDS | 35.0% | |
| ! | TCTTTTATCTTATGAGCAGG+AGG | - | chr6_3:30828052-30828071 | Msa0947690:CDS | 35.0% |
| TGAGCAATCATATACAGCAA+AGG | + | chr6_3:30828170-30828189 | None:intergenic | 35.0% | |
| TACAATATTACCAAGGATGG+TGG | - | chr6_3:30828332-30828351 | Msa0947690:intron | 35.0% | |
| ACAATATTACCAAGGATGGT+GGG | - | chr6_3:30828333-30828352 | Msa0947690:intron | 35.0% | |
| TGAACCTTTGTCTACCATTA+AGG | - | chr6_3:30828379-30828398 | Msa0947690:intron | 35.0% | |
| CTTACCTTAATGGTAGACAA+AGG | + | chr6_3:30828386-30828405 | None:intergenic | 35.0% | |
| GTTAATCGGAATATGTGTTG+TGG | + | chr6_3:30828497-30828516 | None:intergenic | 35.0% | |
| !! | CGTGATTTTAACCAATGCTT+TGG | + | chr6_3:30828568-30828587 | None:intergenic | 35.0% |
| !! | ATGCTCTGAAAGAAGTTCAA+TGG | + | chr6_3:30828620-30828639 | None:intergenic | 35.0% |
| ! | TCGTTTGAAACTCTCATTAG+AGG | + | chr6_3:30828725-30828744 | None:intergenic | 35.0% |
| TATCAAGCGTTTCATTGATC+AGG | - | chr6_3:30828747-30828766 | Msa0947690:intron | 35.0% | |
| ! | CGGCTTTTACTTCATTATAG+TGG | + | chr6_3:30828875-30828894 | None:intergenic | 35.0% |
| CTCATACTTCTAAATCGATC+GGG | - | chr6_3:30828900-30828919 | Msa0947690:intron | 35.0% | |
| CCGTCAAATGTTAGTGTAAT+AGG | - | chr6_3:30828940-30828959 | Msa0947690:intron | 35.0% | |
| TTCAATGTTGAAATTCCTGG+TGG | + | chr6_3:30829050-30829069 | None:intergenic | 35.0% | |
| GAAAAAGAATAAGAGGGCTT+TGG | - | chr6_3:30829156-30829175 | Msa0947690:intron | 35.0% | |
| ! | TTTGGTTGGTACTATAGTGT+AGG | - | chr6_3:30829327-30829346 | Msa0947690:CDS | 35.0% |
| TTTCAAATAAGCAGGATGCT+TGG | - | chr6_3:30829369-30829388 | Msa0947690:intron | 35.0% | |
| TTCAAATAAGCAGGATGCTT+GGG | - | chr6_3:30829370-30829389 | Msa0947690:intron | 35.0% | |
| TTGTTTGCATCTATGAAGCA+CGG | - | chr6_3:30829438-30829457 | Msa0947690:intron | 35.0% | |
| AAATCAAACTGGTCACACTA+AGG | - | chr6_3:30829694-30829713 | Msa0947690:CDS | 35.0% | |
| GGAAACCAGAAAAAAGAGTT+GGG | + | chr6_3:30829862-30829881 | None:intergenic | 35.0% | |
| ! | GTACACAAGATTCATTTTCC+TGG | - | chr6_3:30830339-30830358 | Msa0947690:intron | 35.0% |
| ! | TCTAGAGGAAATTGATAACC+AGG | + | chr6_3:30830360-30830379 | None:intergenic | 35.0% |
| TGGTTATCAATTTCCTCTAG+AGG | - | chr6_3:30830359-30830378 | Msa0947690:intron | 35.0% | |
| TTGTCATTAACAACGCCATT+GGG | + | chr6_3:30830578-30830597 | None:intergenic | 35.0% | |
| ! | ACGAACTTTGTTTCGTTCAT+TGG | - | chr6_3:30830734-30830753 | Msa0947690:intron | 35.0% |
| TGTAAGTCCTTAGGTTTGAA+AGG | - | chr6_3:30830800-30830819 | Msa0947690:intron | 35.0% | |
| GTAAGTCCTTAGGTTTGAAA+GGG | - | chr6_3:30830801-30830820 | Msa0947690:intron | 35.0% | |
| TACATTCCCTTTCAAACCTA+AGG | + | chr6_3:30830810-30830829 | None:intergenic | 35.0% | |
| GAAAGGGAATGTAATTCAAG+AGG | - | chr6_3:30830817-30830836 | Msa0947690:intron | 35.0% | |
| !! | ATTGAAGTTCTGAGAGAACG+AGG | + | chr6_3:30823786-30823805 | None:intergenic | 40.0% |
| GATGAAACTGAAGTTCTTGG+TGG | - | chr6_3:30824146-30824165 | Msa0947690:exon | 40.0% | |
| ! | GGTGATGATTCTGATAGTGA+TGG | - | chr6_3:30824167-30824186 | Msa0947690:CDS | 40.0% |
| TAGTGATGGCTTTCTTGAAG+AGG | - | chr6_3:30824181-30824200 | Msa0947690:CDS | 40.0% | |
| ATGGCTTTCTTGAAGAGGTT+TGG | - | chr6_3:30824186-30824205 | Msa0947690:CDS | 40.0% | |
| TAGTGTTCTTGGATTTAGCC+CGG | - | chr6_3:30824386-30824405 | Msa0947690:intron | 40.0% | |
| ATTTATGTTGGATGTCGGCA+AGG | - | chr6_3:30824436-30824455 | Msa0947690:intron | 40.0% | |
| CGGCGAATGCTAATATTGTT+AGG | - | chr6_3:30824470-30824489 | Msa0947690:intron | 40.0% | |
| TTAGGCTGGATACCTTCATT+TGG | - | chr6_3:30824488-30824507 | Msa0947690:intron | 40.0% | |
| TAGGCTGGATACCTTCATTT+GGG | - | chr6_3:30824489-30824508 | Msa0947690:intron | 40.0% | |
| GAAACTCACACACAACTGTA+AGG | + | chr6_3:30824527-30824546 | None:intergenic | 40.0% | |
| TACAGTTGTGTGTGAGTTTC+AGG | - | chr6_3:30824527-30824546 | Msa0947690:CDS | 40.0% | |
| AACACATTCGAGAACCAAAC+TGG | + | chr6_3:30824797-30824816 | None:intergenic | 40.0% | |
| ACGTTCAATGACCAAGCTAA+CGG | + | chr6_3:30824826-30824845 | None:intergenic | 40.0% | |
| TGATGGAGTAAACTGGCTAA+TGG | + | chr6_3:30824854-30824873 | None:intergenic | 40.0% | |
| ATGACTAACAGACACACTCA+AGG | - | chr6_3:30824875-30824894 | Msa0947690:intron | 40.0% | |
| ! | GGATTATAGTGACACTGACT+CGG | - | chr6_3:30824925-30824944 | Msa0947690:intron | 40.0% |
| !! | GATTATAGTGACACTGACTC+GGG | - | chr6_3:30824926-30824945 | Msa0947690:intron | 40.0% |
| TCTAGCATTGCCGATATTAC+CGG | - | chr6_3:30825051-30825070 | Msa0947690:intron | 40.0% | |
| ! | TGATGCAAGGCTTTTGTAGA+TGG | - | chr6_3:30825184-30825203 | Msa0947690:intron | 40.0% |
| !!! | GCTTTTGTAGATGGTAATGG+TGG | - | chr6_3:30825193-30825212 | Msa0947690:intron | 40.0% |
| ! | GTGTCCTATGTTTTCTTGGT+TGG | - | chr6_3:30825309-30825328 | Msa0947690:intron | 40.0% |
| GCCAGAAATTTAGAAAACCC+TGG | + | chr6_3:30825419-30825438 | None:intergenic | 40.0% | |
| CATAAGAAAGCTCCAACTAC+TGG | + | chr6_3:30826045-30826064 | None:intergenic | 40.0% | |
| TGTCGGACATTGACATATGT+CGG | - | chr6_3:30826318-30826337 | Msa0947690:intron | 40.0% | |
| !! | CTTCTAGTAGAAGAAGTGTC+TGG | + | chr6_3:30826347-30826366 | None:intergenic | 40.0% |
| ! | CTATGTTTGATTTACGACGG+GGG | - | chr6_3:30826400-30826419 | Msa0947690:CDS | 40.0% |
| ACTAGGAATTGAGCCTTAAG+AGG | + | chr6_3:30826533-30826552 | None:intergenic | 40.0% | |
| TGAAAATGCACATACTCAGG+TGG | - | chr6_3:30826726-30826745 | Msa0947690:intron | 40.0% | |
| GAAAATGCACATACTCAGGT+GGG | - | chr6_3:30826727-30826746 | Msa0947690:intron | 40.0% | |
| TTTATGAGACAAGTAAGGGC+AGG | + | chr6_3:30826817-30826836 | None:intergenic | 40.0% | |
| ! | TGGTTGTTTCAGAATCACTG+CGG | + | chr6_3:30826858-30826877 | None:intergenic | 40.0% |
| GATTGAGAAGGCTAGTATCT+CGG | + | chr6_3:30827121-30827140 | None:intergenic | 40.0% | |
| AGAAGCTTGTGCAGTAAAGA+TGG | + | chr6_3:30827183-30827202 | None:intergenic | 40.0% | |
| TTTACTGCACAAGCTTCTCA+AGG | - | chr6_3:30827185-30827204 | Msa0947690:intron | 40.0% | |
| GTATTAAGGGAATCTGGCTA+CGG | + | chr6_3:30827545-30827564 | None:intergenic | 40.0% | |
| ! | TGCAGATTTGTGTTGATCTC+TGG | - | chr6_3:30827690-30827709 | Msa0947690:CDS | 40.0% |
| ! | GCAGATTTGTGTTGATCTCT+GGG | - | chr6_3:30827691-30827710 | Msa0947690:CDS | 40.0% |
| ! | TAAAGAGCATAGCTCCACAA+AGG | + | chr6_3:30827873-30827892 | None:intergenic | 40.0% |
| TCTAGGTGACATATTGCTGA+AGG | - | chr6_3:30827937-30827956 | Msa0947690:CDS | 40.0% | |
| CTAGGTGACATATTGCTGAA+GGG | - | chr6_3:30827938-30827957 | Msa0947690:CDS | 40.0% | |
| TAGGTGACATATTGCTGAAG+GGG | - | chr6_3:30827939-30827958 | Msa0947690:CDS | 40.0% | |
| TTTATCTTATGAGCAGGAGG+TGG | - | chr6_3:30828055-30828074 | Msa0947690:CDS | 40.0% | |
| ACTCTCAGTGGCAAATATCT+AGG | + | chr6_3:30828227-30828246 | None:intergenic | 40.0% | |
| TGAGAGTCAGGTGTATTCAA+TGG | - | chr6_3:30828240-30828259 | Msa0947690:CDS | 40.0% | |
| GATGAAAATCCCACTAGAAC+CGG | + | chr6_3:30828279-30828298 | None:intergenic | 40.0% | |
| ! | TTTTGCAGCTTCCAAAGCAT+TGG | - | chr6_3:30828554-30828573 | Msa0947690:intron | 40.0% |
| TAGATGAGACACACTCTTCT+TGG | + | chr6_3:30828597-30828616 | None:intergenic | 40.0% | |
| ATCAAAATAGACGGCACTGT+TGG | + | chr6_3:30828843-30828862 | None:intergenic | 40.0% | |
| ATACTTCTAAATCGATCGGG+TGG | - | chr6_3:30828903-30828922 | Msa0947690:intron | 40.0% | |
| !! | TGTGTTGATTACAAACCACC+AGG | - | chr6_3:30829032-30829051 | Msa0947690:intron | 40.0% |
| ACAGCGAAAAGCCTACTATT+TGG | - | chr6_3:30829118-30829137 | Msa0947690:intron | 40.0% | |
| TTTGGGAAGTTGTAGACTCT+TGG | - | chr6_3:30829174-30829193 | Msa0947690:intron | 40.0% | |
| AAGTTGTAGACTCTTGGTTG+CGG | - | chr6_3:30829180-30829199 | Msa0947690:intron | 40.0% | |
| ! | CTGATATCTTTTTGTCTCCC+TGG | - | chr6_3:30829292-30829311 | Msa0947690:intron | 40.0% |
| ! | ATATCTTTTTGTCTCCCTGG+AGG | - | chr6_3:30829295-30829314 | Msa0947690:intron | 40.0% |
| TGTCGATGTTATGTCAGTGT+CGG | - | chr6_3:30829516-30829535 | Msa0947690:CDS | 40.0% | |
| ACACGTAGTAAATCTCAACC+TGG | + | chr6_3:30829651-30829670 | None:intergenic | 40.0% | |
| GTCAAATCGTCTTCTATCTC+TGG | + | chr6_3:30829757-30829776 | None:intergenic | 40.0% | |
| !!! | TCTCACCCAACTCTTTTTTC+TGG | - | chr6_3:30829854-30829873 | Msa0947690:intron | 40.0% |
| GGGAAACCAGAAAAAAGAGT+TGG | + | chr6_3:30829863-30829882 | None:intergenic | 40.0% | |
| ACCTAAATTCCCACGTAAAG+GGG | + | chr6_3:30829884-30829903 | None:intergenic | 40.0% | |
| CACCTAAATTCCCACGTAAA+GGG | + | chr6_3:30829885-30829904 | None:intergenic | 40.0% | |
| ATCTGTCGAAACGTTTCTTC+AGG | - | chr6_3:30829970-30829989 | Msa0947690:intron | 40.0% | |
| !! | TCCCGTGAAAGTTTTATCCA+CGG | - | chr6_3:30830036-30830055 | Msa0947690:intron | 40.0% |
| TCCCGTGGATAAAACTTTCA+CGG | + | chr6_3:30830041-30830060 | None:intergenic | 40.0% | |
| TTCCTCCTGTGAATATCTCA+CGG | - | chr6_3:30830062-30830081 | Msa0947690:intron | 40.0% | |
| AGCGATTACAAAGAGGAAGA+AGG | - | chr6_3:30830236-30830255 | Msa0947690:intron | 40.0% | |
| CTGCTGAGAAGCTTATTCTA+TGG | + | chr6_3:30830281-30830300 | None:intergenic | 40.0% | |
| AAGAGAAAGCAGCATCCAAA+TGG | - | chr6_3:30830500-30830519 | Msa0947690:intron | 40.0% | |
| AAGAAAACGCAACATCCCAA+TGG | - | chr6_3:30830560-30830579 | Msa0947690:intron | 40.0% | |
| GTTGTCATTAACAACGCCAT+TGG | + | chr6_3:30830579-30830598 | None:intergenic | 40.0% | |
| !! | AATGACAACCCTACTGATTC+TGG | - | chr6_3:30830590-30830609 | Msa0947690:CDS | 40.0% |
| ! | ACCTTCATTTGGGTTTGACC+TGG | - | chr6_3:30824499-30824518 | Msa0947690:intron | 45.0% |
| ! | CCTTCATTTGGGTTTGACCT+GGG | - | chr6_3:30824500-30824519 | Msa0947690:intron | 45.0% |
| AGTTGTGTGTGAGTTTCAGG+TGG | - | chr6_3:30824530-30824549 | Msa0947690:CDS | 45.0% | |
| GTGTTCTTCGTTAGCCAGTT+TGG | - | chr6_3:30824780-30824799 | Msa0947690:intron | 45.0% | |
| ! | GTGTTTTTCGTCCGTTAGCT+TGG | - | chr6_3:30824812-30824831 | Msa0947690:CDS | 45.0% |
| GGACCAAGCAGATTGGAATT+TGG | + | chr6_3:30825719-30825738 | None:intergenic | 45.0% | |
| TTGCGTTTGCATCAACCAAC+TGG | - | chr6_3:30826150-30826169 | Msa0947690:CDS | 45.0% | |
| CAGGTGTGTTAGTGCTTCAT+AGG | + | chr6_3:30826210-30826229 | None:intergenic | 45.0% | |
| ATTGAGCCTTAAGAGGCTCA+AGG | + | chr6_3:30826526-30826545 | None:intergenic | 45.0% | |
| ! | TCTGAAACAACCAGTGACAG+TGG | - | chr6_3:30826865-30826884 | Msa0947690:CDS | 45.0% |
| AGTGGCAGTGTCTTATCCAA+CGG | - | chr6_3:30826883-30826902 | Msa0947690:CDS | 45.0% | |
| TCCAAGCTCGAGTTCAAAGA+AGG | - | chr6_3:30826990-30827009 | Msa0947690:CDS | 45.0% | |
| TCCTTCTTTGAACTCGAGCT+TGG | + | chr6_3:30826994-30827013 | None:intergenic | 45.0% | |
| TCTGAGTCGACAGATTGAGA+AGG | + | chr6_3:30827133-30827152 | None:intergenic | 45.0% | |
| CAGAGCTTCAATGATCTTCC+TGG | - | chr6_3:30827149-30827168 | Msa0947690:intron | 45.0% | |
| GTAAAGATGGAAATGCAGCC+AGG | + | chr6_3:30827170-30827189 | None:intergenic | 45.0% | |
| TTCTGTTAGCTACTCGTTGC+TGG | - | chr6_3:30827357-30827376 | Msa0947690:intron | 45.0% | |
| ! | CTCATACTTTTCCTGCCATC+TGG | - | chr6_3:30827602-30827621 | Msa0947690:CDS | 45.0% |
| ! | TGTGTTGATCTCTGGGTAAC+AGG | - | chr6_3:30827698-30827717 | Msa0947690:CDS | 45.0% |
| ! | ATGACATGCATAAGGCGTCT+AGG | - | chr6_3:30827920-30827939 | Msa0947690:CDS | 45.0% |
| AATATCTAGGCCCAGGAAAG+AGG | + | chr6_3:30828214-30828233 | None:intergenic | 45.0% | |
| GATATTTGCCACTGAGAGTC+AGG | - | chr6_3:30828228-30828247 | Msa0947690:intron | 45.0% | |
| TGAATACACCTGACTCTCAG+TGG | + | chr6_3:30828239-30828258 | None:intergenic | 45.0% | |
| !! | CAATGGCTTAATCGACTTGC+CGG | - | chr6_3:30828257-30828276 | Msa0947690:CDS | 45.0% |
| CCAGCACGAATGATGTAACA+GGG | + | chr6_3:30828301-30828320 | None:intergenic | 45.0% | |
| TCCAGCACGAATGATGTAAC+AGG | + | chr6_3:30828302-30828321 | None:intergenic | 45.0% | |
| CCAGTTCGGGAAAAGATACA+TGG | + | chr6_3:30828660-30828679 | None:intergenic | 45.0% | |
| ! | CCATGTATCTTTTCCCGAAC+TGG | - | chr6_3:30828657-30828676 | Msa0947690:intron | 45.0% |
| ACAAAGACCCATCAACTGCT+GGG | + | chr6_3:30829422-30829441 | None:intergenic | 45.0% | |
| AACAAAGACCCATCAACTGC+TGG | + | chr6_3:30829423-30829442 | None:intergenic | 45.0% | |
| ATCGACACATCTGATCGAAG+GGG | + | chr6_3:30829552-30829571 | None:intergenic | 45.0% | |
| CATCGACACATCTGATCGAA+GGG | + | chr6_3:30829553-30829572 | None:intergenic | 45.0% | |
| ATTGAGGTCCATTCACTCGA+TGG | - | chr6_3:30829619-30829638 | Msa0947690:intron | 45.0% | |
| TTGAGGTCCATTCACTCGAT+GGG | - | chr6_3:30829620-30829639 | Msa0947690:intron | 45.0% | |
| AAACTGGTCACACTAAGGCA+TGG | - | chr6_3:30829699-30829718 | Msa0947690:CDS | 45.0% | |
| !! | CACGTTGAACCAGTGGATTA+TGG | + | chr6_3:30829731-30829750 | None:intergenic | 45.0% |
| CCTAAATTCCCACGTAAAGG+GGG | + | chr6_3:30829883-30829902 | None:intergenic | 45.0% | |
| CCACCTAAATTCCCACGTAA+AGG | + | chr6_3:30829886-30829905 | None:intergenic | 45.0% | |
| CCTTTACGTGGGAATTTAGG+TGG | - | chr6_3:30829883-30829902 | Msa0947690:intron | 45.0% | |
| TCGACAGATTGCTGATCCTT+CGG | + | chr6_3:30829959-30829978 | None:intergenic | 45.0% | |
| ! | TTTTCTTCCCTCCCTGAATC+TGG | - | chr6_3:30830002-30830021 | Msa0947690:intron | 45.0% |
| GACAATCCCTTCCAGATTCA+GGG | + | chr6_3:30830016-30830035 | None:intergenic | 45.0% | |
| AGACAATCCCTTCCAGATTC+AGG | + | chr6_3:30830017-30830036 | None:intergenic | 45.0% | |
| CCCGTGGATAAAACTTTCAC+GGG | + | chr6_3:30830040-30830059 | None:intergenic | 45.0% | |
| !! | CCCGTGAAAGTTTTATCCAC+GGG | - | chr6_3:30830037-30830056 | Msa0947690:intron | 45.0% |
| TCCTCCTGTGAATATCTCAC+GGG | - | chr6_3:30830063-30830082 | Msa0947690:intron | 45.0% | |
| AGGACTGGAACCATGATTCA+GGG | + | chr6_3:30830104-30830123 | None:intergenic | 45.0% | |
| AAGGACTGGAACCATGATTC+AGG | + | chr6_3:30830105-30830124 | None:intergenic | 45.0% | |
| TGAATCATGGTTCCAGTCCT+TGG | - | chr6_3:30830104-30830123 | Msa0947690:intron | 45.0% | |
| AGTTTAGCTACACCAAGGAC+TGG | + | chr6_3:30830119-30830138 | None:intergenic | 45.0% | |
| TAACAGGCTGAGAAACGTAG+TGG | - | chr6_3:30830156-30830175 | Msa0947690:intron | 45.0% | |
| !! | CTACAAAAGCATCATGCGCA+AGG | - | chr6_3:30830200-30830219 | Msa0947690:intron | 45.0% |
| CCTCTTTGTAATCGCTTTCC+TGG | + | chr6_3:30830232-30830251 | None:intergenic | 45.0% | |
| CCAGGAAAGCGATTACAAAG+AGG | - | chr6_3:30830229-30830248 | Msa0947690:intron | 45.0% | |
| CAGCATAGATCATGGAGACA+TGG | + | chr6_3:30830456-30830475 | None:intergenic | 45.0% | |
| ATGATCTATGCTGCAGTCTC+CGG | - | chr6_3:30830463-30830482 | Msa0947690:intron | 45.0% | |
| CTCTTCTTCTTTCCTTTGCC+CGG | + | chr6_3:30830485-30830504 | None:intergenic | 45.0% | |
| CATCCAAATGGCGTTGTTGA+TGG | - | chr6_3:30830512-30830531 | Msa0947690:intron | 45.0% | |
| TTGCCATCAACAACGCCATT+TGG | + | chr6_3:30830518-30830537 | None:intergenic | 45.0% | |
| !! | TAATTATTATTATTTGAAAA+TGG | - | chr6_3:30823978-30823997 | Msa0947690:three_prime_UTR | 5.0% |
| !! | AATTATTATTATTTGAAAAT+GGG | - | chr6_3:30823979-30823998 | Msa0947690:three_prime_UTR | 5.0% |
| CCCAGGTCAAACCCAAATGA+AGG | + | chr6_3:30824503-30824522 | None:intergenic | 50.0% | |
| ACACACAACTGTAAGGTCCC+AGG | + | chr6_3:30824520-30824539 | None:intergenic | 50.0% | |
| !! | TGACACTGACTCGGGCATTT+AGG | - | chr6_3:30824934-30824953 | Msa0947690:intron | 50.0% |
| GTTCGTGTCAGTATCGTGTC+AGG | + | chr6_3:30826229-30826248 | None:intergenic | 50.0% | |
| TGACACGAACACGTTGACAC+CGG | - | chr6_3:30826239-30826258 | Msa0947690:intron | 50.0% | |
| ! | TGTTTGATTTACGACGGGGG+TGG | - | chr6_3:30826403-30826422 | Msa0947690:CDS | 50.0% |
| ! | GTTTGATTTACGACGGGGGT+GGG | - | chr6_3:30826404-30826423 | Msa0947690:CDS | 50.0% |
| ! | TTTGATTTACGACGGGGGTG+GGG | - | chr6_3:30826405-30826424 | Msa0947690:CDS | 50.0% |
| CGGTTACCTTGAGCCTCTTA+AGG | - | chr6_3:30826517-30826536 | Msa0947690:CDS | 50.0% | |
| TAAGACACTGCCACTGTCAC+TGG | + | chr6_3:30826878-30826897 | None:intergenic | 50.0% | |
| TTCACTCGTCTGAATGCCGT+TGG | + | chr6_3:30826902-30826921 | None:intergenic | 50.0% | |
| GAAGGCTAGTATCTCGGAGT+CGG | + | chr6_3:30827115-30827134 | None:intergenic | 50.0% | |
| ACACATCTTAGCCAGATGGC+AGG | + | chr6_3:30827616-30827635 | None:intergenic | 50.0% | |
| AGATTGAGGGCGACTGATGA+AGG | + | chr6_3:30827825-30827844 | None:intergenic | 50.0% | |
| GTGACATATTGCTGAAGGGG+TGG | - | chr6_3:30827942-30827961 | Msa0947690:CDS | 50.0% | |
| GGGGTGGCAAACGAAAAAGA+AGG | - | chr6_3:30827958-30827977 | Msa0947690:CDS | 50.0% | |
| GAGTTGCTCTCCTCTTTCCT+GGG | - | chr6_3:30828201-30828220 | Msa0947690:intron | 50.0% | |
| AGTGGCAAATATCTAGGCCC+AGG | + | chr6_3:30828221-30828240 | None:intergenic | 50.0% | |
| !! | AATCGACTTGCCGGTTCTAG+TGG | - | chr6_3:30828266-30828285 | Msa0947690:CDS | 50.0% |
| !! | ATCGACTTGCCGGTTCTAGT+GGG | - | chr6_3:30828267-30828286 | Msa0947690:CDS | 50.0% |
| CCCTGTTACATCATTCGTGC+TGG | - | chr6_3:30828298-30828317 | Msa0947690:intron | 50.0% | |
| AAGTGGAGCAGTTGCCAGTT+CGG | + | chr6_3:30828674-30828693 | None:intergenic | 50.0% | |
| ! | TCTTTTTGTCTCCCTGGAGG+AGG | - | chr6_3:30829298-30829317 | Msa0947690:CDS | 50.0% |
| ATCGTGACCCAGCAGTTGAT+GGG | - | chr6_3:30829412-30829431 | Msa0947690:intron | 50.0% | |
| CATCTATGAAGCACGGACAC+TGG | - | chr6_3:30829445-30829464 | Msa0947690:intron | 50.0% | |
| ! | GTTATGTCAGTGTCGGACAC+CGG | - | chr6_3:30829523-30829542 | Msa0947690:CDS | 50.0% |
| CCATCGACACATCTGATCGA+AGG | + | chr6_3:30829554-30829573 | None:intergenic | 50.0% | |
| CCTTCGATCAGATGTGTCGA+TGG | - | chr6_3:30829551-30829570 | Msa0947690:CDS | 50.0% | |
| ! | GATGTGTCGATGGTACAGAG+AGG | - | chr6_3:30829561-30829580 | Msa0947690:intron | 50.0% |
| GGTTAGACCCATCGAGTGAA+TGG | + | chr6_3:30829630-30829649 | None:intergenic | 50.0% | |
| TTCACTCGATGGGTCTAACC+AGG | - | chr6_3:30829630-30829649 | Msa0947690:intron | 50.0% | |
| TGGTCACACTAAGGCATGGA+AGG | - | chr6_3:30829703-30829722 | Msa0947690:CDS | 50.0% | |
| GGTCACACTAAGGCATGGAA+GGG | - | chr6_3:30829704-30829723 | Msa0947690:CDS | 50.0% | |
| GTCACACTAAGGCATGGAAG+GGG | - | chr6_3:30829705-30829724 | Msa0947690:CDS | 50.0% | |
| CTGGTAACACGTTGAACCAG+TGG | + | chr6_3:30829738-30829757 | None:intergenic | 50.0% | |
| !! | TTCTGGTTTCCCCCTTTACG+TGG | - | chr6_3:30829871-30829890 | Msa0947690:intron | 50.0% |
| ! | TCTGGTTTCCCCCTTTACGT+GGG | - | chr6_3:30829872-30829891 | Msa0947690:intron | 50.0% |
| CCCCCTTTACGTGGGAATTT+AGG | - | chr6_3:30829880-30829899 | Msa0947690:intron | 50.0% | |
| TGATGTGCCTTTCTCACCGA+AGG | - | chr6_3:30829940-30829959 | Msa0947690:intron | 50.0% | |
| TGCTGATCCTTCGGTGAGAA+AGG | + | chr6_3:30829950-30829969 | None:intergenic | 50.0% | |
| TCAGGGAGGGAAGAAAAGTG+AGG | + | chr6_3:30829999-30830018 | None:intergenic | 50.0% | |
| TTCCCTCCCTGAATCTGGAA+GGG | - | chr6_3:30830007-30830026 | Msa0947690:intron | 50.0% | |
| ATCCCTTCCAGATTCAGGGA+GGG | + | chr6_3:30830012-30830031 | None:intergenic | 50.0% | |
| AATCCCTTCCAGATTCAGGG+AGG | + | chr6_3:30830013-30830032 | None:intergenic | 50.0% | |
| TCCCGTGAGATATTCACAGG+AGG | + | chr6_3:30830067-30830086 | None:intergenic | 50.0% | |
| CTCTCCCGTGAGATATTCAC+AGG | + | chr6_3:30830070-30830089 | None:intergenic | 50.0% | |
| CTGTGAATATCTCACGGGAG+AGG | - | chr6_3:30830068-30830087 | Msa0947690:intron | 50.0% | |
| ACTGGAACCATGATTCAGGG+GGG | + | chr6_3:30830101-30830120 | None:intergenic | 50.0% | |
| GACTGGAACCATGATTCAGG+GGG | + | chr6_3:30830102-30830121 | None:intergenic | 50.0% | |
| GGACTGGAACCATGATTCAG+GGG | + | chr6_3:30830103-30830122 | None:intergenic | 50.0% | |
| CGTGTCTTCGATTCCTCTAG+AGG | + | chr6_3:30830375-30830394 | None:intergenic | 50.0% | |
| GGAGACTGCAGCATAGATCA+TGG | + | chr6_3:30830464-30830483 | None:intergenic | 50.0% | |
| TGATCTATGCTGCAGTCTCC+GGG | - | chr6_3:30830464-30830483 | Msa0947690:intron | 50.0% | |
| !! | GATGGCAACCCTACTGATTC+TGG | - | chr6_3:30830530-30830549 | Msa0947690:intron | 50.0% |
| TAGCATTCGCCGGATGAGCT+AGG | + | chr6_3:30824462-30824481 | None:intergenic | 55.0% | |
| TGTCGAGTGAGTCTGCCAGT+TGG | + | chr6_3:30826168-30826187 | None:intergenic | 55.0% | |
| GTGTCAGTGTGCGTCAGTGT+CGG | - | chr6_3:30826301-30826320 | Msa0947690:intron | 55.0% | |
| GTATCTCGGAGTCGGTGATC+TGG | + | chr6_3:30827107-30827126 | None:intergenic | 55.0% | |
| GGAGTTGCTCTCCTCTTTCC+TGG | - | chr6_3:30828200-30828219 | Msa0947690:intron | 55.0% | |
| !! | ACCAAGGATGGTGGGAAACC+TGG | - | chr6_3:30828341-30828360 | Msa0947690:intron | 55.0% |
| TCCAGGTTTCCCACCATCCT+TGG | + | chr6_3:30828345-30828364 | None:intergenic | 55.0% | |
| AGTGGAGCAGTTGCCAGTTC+GGG | + | chr6_3:30828673-30828692 | None:intergenic | 55.0% | |
| CCAAAACCTCTCCTCCTCCA+GGG | + | chr6_3:30829312-30829331 | None:intergenic | 55.0% | |
| ACCAAAACCTCTCCTCCTCC+AGG | + | chr6_3:30829313-30829332 | None:intergenic | 55.0% | |
| !! | GGAGGAGGAGAGGTTTTGGT+TGG | - | chr6_3:30829313-30829332 | Msa0947690:CDS | 55.0% |
| CAGGATGCTTGGGAAGAGAG+AGG | - | chr6_3:30829380-30829399 | Msa0947690:intron | 55.0% | |
| CATCGTGACCCAGCAGTTGA+TGG | - | chr6_3:30829411-30829430 | Msa0947690:intron | 55.0% | |
| !! | CATCTGATCGAAGGGGTGTC+CGG | + | chr6_3:30829545-30829564 | None:intergenic | 55.0% |
| TGGAAGGGGCCATAATCCAC+TGG | - | chr6_3:30829719-30829738 | Msa0947690:intron | 55.0% | |
| CTTCCCTCCCTGAATCTGGA+AGG | - | chr6_3:30830006-30830025 | Msa0947690:intron | 55.0% | |
| ATTCACAGGAGGAAGTCCCG+TGG | + | chr6_3:30830056-30830075 | None:intergenic | 55.0% | |
| ATCCATGCCCCCCTGAATCA+TGG | - | chr6_3:30830091-30830110 | Msa0947690:intron | 55.0% | |
| AACCATGATTCAGGGGGGCA+TGG | + | chr6_3:30830096-30830115 | None:intergenic | 55.0% | |
| TGGAGACGCTGATCAGTGCA+AGG | - | chr6_3:30830859-30830878 | Msa0947690:CDS | 55.0% | |
| TCGGCAAGGCCTAGCTCATC+CGG | - | chr6_3:30824450-30824469 | Msa0947690:intron | 60.0% | |
| TTGTCTCCCTGGAGGAGGAG+AGG | - | chr6_3:30829303-30829322 | Msa0947690:CDS | 60.0% | |
| ! | CCCTGGAGGAGGAGAGGTTT+TGG | - | chr6_3:30829309-30829328 | Msa0947690:CDS | 60.0% |
| TCATGCGCAAGGCTGCTTCC+AGG | - | chr6_3:30830211-30830230 | Msa0947690:intron | 60.0% | |
| ATGCTGCAGTCTCCGGGCAA+AGG | - | chr6_3:30830470-30830489 | Msa0947690:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 30823746 | 30831035 | 30823746 | ID=Msa0947690;Name=Msa0947690 |
| chr6_3 | mRNA | 30823746 | 30831035 | 30823746 | ID=Msa0947690-mRNA-1;Parent=Msa0947690;Name=Msa0947690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=79|0.83|0.92|0.92|1|1|13|413|740 |
| chr6_3 | exon | 30823746 | 30824302 | 30823746 | ID=Msa0947690-mRNA-1:exon:8170;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30824524 | 30824619 | 30824524 | ID=Msa0947690-mRNA-1:exon:8169;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30824790 | 30824879 | 30824790 | ID=Msa0947690-mRNA-1:exon:8168;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30826013 | 30826219 | 30826013 | ID=Msa0947690-mRNA-1:exon:8167;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30826381 | 30826710 | 30826381 | ID=Msa0947690-mRNA-1:exon:8166;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30826802 | 30827086 | 30826802 | ID=Msa0947690-mRNA-1:exon:8165;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30827575 | 30828081 | 30827575 | ID=Msa0947690-mRNA-1:exon:8164;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30828231 | 30828287 | 30828231 | ID=Msa0947690-mRNA-1:exon:8163;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30829297 | 30829368 | 30829297 | ID=Msa0947690-mRNA-1:exon:8162;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30829484 | 30829578 | 30829484 | ID=Msa0947690-mRNA-1:exon:8161;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30829676 | 30829733 | 30829676 | ID=Msa0947690-mRNA-1:exon:8160;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30830579 | 30830751 | 30830579 | ID=Msa0947690-mRNA-1:exon:8159;Parent=Msa0947690-mRNA-1 |
| chr6_3 | exon | 30830848 | 30831035 | 30830848 | ID=Msa0947690-mRNA-1:exon:8158;Parent=Msa0947690-mRNA-1 |
| chr6_3 | five_prime_UTR | 30830957 | 30831035 | 30830957 | ID=Msa0947690-mRNA-1:five_prime_utr;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30830848 | 30830956 | 30830848 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30830579 | 30830751 | 30830579 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30829676 | 30829733 | 30829676 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30829484 | 30829578 | 30829484 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30829297 | 30829368 | 30829297 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30828231 | 30828287 | 30828231 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30827575 | 30828081 | 30827575 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30826802 | 30827086 | 30826802 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30826381 | 30826710 | 30826381 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30826013 | 30826219 | 30826013 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30824790 | 30824879 | 30824790 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30824524 | 30824619 | 30824524 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | CDS | 30824159 | 30824302 | 30824159 | ID=Msa0947690-mRNA-1:cds;Parent=Msa0947690-mRNA-1 |
| chr6_3 | three_prime_UTR | 30823746 | 30824158 | 30823746 | ID=Msa0947690-mRNA-1:three_prime_utr;Parent=Msa0947690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
