AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0715700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0715700 MtrunA17_Chr5g0403081 91.949 472 21 1 1 472 1 455 0.0 801
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0715700 AT4G37210.1 48.206 446 168 11 57 469 74 489 2.04e-115 348
Msa0715700 AT4G37210.2 47.734 331 123 5 57 366 74 375 2.93e-85 267

Find 149 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATGAGGGTTTGGGTTT+TGG 0.051805 5_1:-8775440 None:intergenic
ATTATATGCATGTTCCTTTA+AGG 0.122207 5_1:+8779085 Msa0715700:three_prime_UTR
TTCTTCTACCATGGTGATTT+TGG 0.130253 5_1:-8775522 None:intergenic
TGAGGAAGCCGTTGCTTATT+TGG 0.172827 5_1:+8778262 Msa0715700:CDS
AAGAGGGAAAGTTGAGATTT+TGG 0.200872 5_1:-8775472 None:intergenic
ACCAAAATCATTCTCCTTCA+TGG 0.222353 5_1:-8775750 None:intergenic
ATCTCAGCGAGAATTGATTT+TGG 0.224515 5_1:-8778553 None:intergenic
CAATTTGCTCAATGAGGGTT+TGG 0.248194 5_1:-8775447 None:intergenic
TTTGGCGACTCTTTGAATTA+TGG 0.252411 5_1:+8778882 Msa0715700:three_prime_UTR
AATTAAGCGCCAAACCTTAA+AGG 0.257487 5_1:-8779099 None:intergenic
GCCATGAAGGAGAATGATTT+TGG 0.258637 5_1:+8775749 Msa0715700:CDS
ATCAACAGAGTTGCCCATTA+TGG 0.268360 5_1:+8776709 Msa0715700:intron
TTAAGGTTTGGCGCTTAATT+AGG 0.291258 5_1:+8779102 Msa0715700:three_prime_UTR
TGGAGACTCCTCCTGCTTCT+TGG 0.302677 5_1:-8776827 None:intergenic
ATCTTCCTGGTCGTTCTTAC+CGG 0.304993 5_1:-8777647 None:intergenic
CCTCCAAACACAAGCATATA+CGG 0.321319 5_1:-8778226 None:intergenic
TATCAACTTGTTCCATAGTA+TGG 0.325848 5_1:-8777783 None:intergenic
TCTTCAGTTGTTTCTAATGC+TGG 0.331950 5_1:-8778796 None:intergenic
CGGGAGCAAGTTCACCATAA+TGG 0.339759 5_1:-8776723 None:intergenic
CACTATCCTCATCATCTTCC+TGG 0.352582 5_1:-8777660 None:intergenic
ATTTCTTATTTCACAAGTTA+AGG 0.352836 5_1:-8778201 None:intergenic
GGAGACTCCTCCTGCTTCTT+GGG 0.358489 5_1:-8776826 None:intergenic
AGACGAGTCGGACCTGGATT+TGG 0.360975 5_1:+8777711 Msa0715700:CDS
ATGCATGTTCCTTTAAGGTT+TGG 0.365790 5_1:+8779090 Msa0715700:three_prime_UTR
GTCCACACATACTACAAATA+TGG 0.368782 5_1:+8776751 Msa0715700:CDS
CTGGTTCAACCAGCTGTTCT+AGG 0.369035 5_1:-8777982 None:intergenic
TTTCCGTATATGCTTGTGTT+TGG 0.380312 5_1:+8778223 Msa0715700:CDS
CGCAGGTCTCTCAAGTGAAC+TGG 0.386407 5_1:+8778412 Msa0715700:CDS
TTCCTTTCCACTGCCTGCCT+TGG 0.387277 5_1:-8778587 None:intergenic
AAAGCAATCTGTCCATACTA+TGG 0.392176 5_1:+8777771 Msa0715700:CDS
TCAGGAGGAAGCCGATCCTT+TGG 0.393753 5_1:+8776795 Msa0715700:CDS
GGGAGCAAGTTCACCATAAT+GGG 0.399197 5_1:-8776722 None:intergenic
TCAGCAATGTTTCTATCATC+TGG 0.400267 5_1:-8778001 None:intergenic
AATTTGCTCAATGAGGGTTT+GGG 0.404009 5_1:-8775446 None:intergenic
GGATTCCACGGCGGGGTTGA+CGG 0.406936 5_1:-8775642 None:intergenic
CAGGAGGAAGCCGATCCTTT+GGG 0.407516 5_1:+8776796 Msa0715700:CDS
TTTGTATGGAATGATGAGTT+TGG 0.415931 5_1:+8778864 Msa0715700:three_prime_UTR
CTAGGATGGATAGAGCCTTC+TGG 0.419799 5_1:-8777964 None:intergenic
GTCACACATCTTGGTGTAGT+AGG 0.440218 5_1:+8778715 Msa0715700:CDS
GTTGCGGCGGATTCCACGGC+GGG 0.447328 5_1:-8775650 None:intergenic
AGACTTCTGACCGTCGCTGC+TGG 0.447523 5_1:-8775687 None:intergenic
CCGTATATGCTTGTGTTTGG+AGG 0.449286 5_1:+8778226 Msa0715700:CDS
CATTGTCCACTTCTGACTCC+TGG 0.452309 5_1:-8776951 None:intergenic
GGCTGATGAGCTGATGGAAA+AGG 0.453203 5_1:+8775718 Msa0715700:CDS
CGCAATTGAGTTATTAGTCT+CGG 0.463063 5_1:-8778363 None:intergenic
ATAGCCGTGCTCTTGAGATC+AGG 0.468923 5_1:+8775789 Msa0715700:CDS
CGATGAAGACGAGTCGGACC+TGG 0.469971 5_1:+8777705 Msa0715700:CDS
CTTCACAGGTCCATCTTTGT+CGG 0.471230 5_1:-8776857 None:intergenic
GTGGTTTAGGGTTCCGTCGA+CGG 0.471495 5_1:-8775603 None:intergenic
AAATAAGCAACGGCTTCCTC+AGG 0.479407 5_1:-8778260 None:intergenic
GAAGGCTACATCTGTTTGTA+AGG 0.480775 5_1:+8778286 Msa0715700:CDS
GTGACAGGTTCGGTTGGTTG+AGG 0.484148 5_1:-8775578 None:intergenic
CGACTCTTTGAATTATGGAT+AGG 0.484982 5_1:+8778887 Msa0715700:three_prime_UTR
AACATTGGCAGATGTTGCTC+TGG 0.486208 5_1:+8777813 Msa0715700:CDS
CAGCGACGGTCAGAAGTCTC+TGG 0.488675 5_1:+8775691 Msa0715700:CDS
CTCAAGTGAACTGGAAAAGA+AGG 0.499187 5_1:+8778421 Msa0715700:CDS
GCTCACACCAATGGATCTGC+TGG 0.500908 5_1:+8778691 Msa0715700:CDS
GGGTGCTGTTCCCAAGAAGC+AGG 0.502021 5_1:+8776816 Msa0715700:CDS
GTTCCGTCGACGGCTGTGAC+AGG 0.511248 5_1:-8775593 None:intergenic
ACATATTCTTGCAAATTCCA+TGG 0.512933 5_1:+8778910 Msa0715700:three_prime_UTR
CCACATGGCGCCGACAAAGA+TGG 0.513330 5_1:+8776847 Msa0715700:CDS
TGGCAACGCATGATTTATAC+TGG 0.515317 5_1:+8778831 Msa0715700:exon
TCTGCTGGAGTCACACATCT+TGG 0.516862 5_1:+8778706 Msa0715700:CDS
TCTATCCATCCTAGAACAGC+TGG 0.517147 5_1:+8777973 Msa0715700:CDS
GTCGACGGCTGTGACAGGTT+CGG 0.517732 5_1:-8775588 None:intergenic
GCATTCATAGCACCCTTCAC+AGG 0.519577 5_1:-8776871 None:intergenic
ATTGGTGTGAGCGGTTGAAA+TGG 0.519732 5_1:-8778680 None:intergenic
TGGTTCAATTTGCTCAATGA+GGG 0.522169 5_1:-8775452 None:intergenic
CGGCTCTCTGAAATTGCAAA+GGG 0.523004 5_1:-8775353 None:intergenic
CGACAAAGATGGACCTGTGA+AGG 0.523351 5_1:+8776858 Msa0715700:CDS
TGCACTGTTATACAAGGCTC+AGG 0.523635 5_1:+8776777 Msa0715700:CDS
GCTGATGAGCTGATGGAAAA+GGG 0.525604 5_1:+8775719 Msa0715700:CDS
GTGTGAGCGGTTGAAATGGT+TGG 0.526499 5_1:-8778676 None:intergenic
GCATCTGCCAAGGCAGGCAG+TGG 0.528560 5_1:+8778580 Msa0715700:CDS
ATTCTAGCATCTGCCAAGGC+AGG 0.536075 5_1:+8778574 Msa0715700:CDS
ATCCGCCGCAACTTCTGCTC+CGG 0.538164 5_1:+8775661 Msa0715700:CDS
AGCCGTTGCTTATTTGGAGA+AGG 0.538307 5_1:+8778268 Msa0715700:CDS
GGACATGGCTGATGAGCTGA+TGG 0.539014 5_1:+8775712 Msa0715700:CDS
AGTTGGAGTTTCTTCTACCA+TGG 0.539327 5_1:-8775531 None:intergenic
TGACCGTCGCTGCTGGACGC+CGG 0.541151 5_1:-8775680 None:intergenic
CCTTTGCAATTTCAGAGAGC+CGG 0.542633 5_1:+8775354 Msa0715700:five_prime_UTR
TTGGTTCAATTTGCTCAATG+AGG 0.544377 5_1:-8775453 None:intergenic
GGATAGTGATACTGAAGAGT+TGG 0.545697 5_1:+8777675 Msa0715700:CDS
TCACACATCTTGGTGTAGTA+GGG 0.546130 5_1:+8778716 Msa0715700:CDS
GCAGATGTTGCTCTGGAAAG+AGG 0.547971 5_1:+8777820 Msa0715700:CDS
CGGTCAGAAGTCTCTGGACA+TGG 0.548472 5_1:+8775697 Msa0715700:CDS
AGAAGTTGCGGCGGATTCCA+CGG 0.555375 5_1:-8775654 None:intergenic
TTCAACCAGCTGTTCTAGGA+TGG 0.560558 5_1:-8777978 None:intergenic
CCATCTTTGTCGGCGCCATG+TGG 0.566588 5_1:-8776847 None:intergenic
ATTTCAACCGCTCACACCAA+TGG 0.569574 5_1:+8778682 Msa0715700:CDS
GTAGTATGTGTGGACACACT+CGG 0.570065 5_1:-8776743 None:intergenic
TGTAGATTTATGTGTAGCCA+AGG 0.570145 5_1:+8778975 Msa0715700:three_prime_UTR
AACCATATTTGTAGTATGTG+TGG 0.571397 5_1:-8776753 None:intergenic
AATGCTTGCTTCTGCCACGC+TGG 0.573158 5_1:-8778764 None:intergenic
CATCTTGGTGTAGTAGGGAG+AGG 0.573263 5_1:+8778721 Msa0715700:CDS
TGTGACTCCAGCAGATCCAT+TGG 0.573283 5_1:-8778698 None:intergenic
GCTCCGGCGTCCAGCAGCGA+CGG 0.574197 5_1:+8775677 Msa0715700:CDS
CCGGCTCTCTGAAATTGCAA+AGG 0.575059 5_1:-8775354 None:intergenic
ACGGCTGTGACAGGTTCGGT+TGG 0.577242 5_1:-8775584 None:intergenic
AAAGGGGAACAAAGCCATGA+AGG 0.577448 5_1:+8775736 Msa0715700:CDS
ACGGAAGTCTCAGATGCAGT+TGG 0.578153 5_1:-8775548 None:intergenic
GGGAACAGCACCCAAAGGAT+CGG 0.585670 5_1:-8776806 None:intergenic
AGCAGATCCATTGGTGTGAG+CGG 0.586600 5_1:-8778689 None:intergenic
AAGAGTGAGCTCCTCACAGT+TGG 0.588916 5_1:+8778621 Msa0715700:CDS
AGTCGGACCTGGATTTGGCA+TGG 0.598772 5_1:+8777716 Msa0715700:CDS
GAACCTGTCACAGCCGTCGA+CGG 0.603391 5_1:+8775590 Msa0715700:CDS
GGACGCCGGAGCAGAAGTTG+CGG 0.603423 5_1:-8775666 None:intergenic
GAACATGCATATAATACTAA+CGG 0.604036 5_1:-8779077 None:intergenic
AAACAACCAGGAGTCAGAAG+TGG 0.605984 5_1:+8776945 Msa0715700:CDS
TGGTTGTGCACTGTTATACA+AGG 0.606143 5_1:+8776771 Msa0715700:CDS
TGCCAAGGCAGGCAGTGGAA+AGG 0.606956 5_1:+8778585 Msa0715700:CDS
CGCCGGAGCAGAAGTTGCGG+CGG 0.609161 5_1:-8775663 None:intergenic
GAGCTCACTCTTGCTAGAGA+TGG 0.609882 5_1:-8778610 None:intergenic
GACAAAGATGGACCTGTGAA+GGG 0.610152 5_1:+8776859 Msa0715700:CDS
TAGTATGTGTGGACACACTC+GGG 0.612826 5_1:-8776742 None:intergenic
TTCCACGGCGGGGTTGACGG+TGG 0.613242 5_1:-8775639 None:intergenic
GGAGGTTAGTTCAAAACCTG+AGG 0.614213 5_1:+8778244 Msa0715700:CDS
TTCTTGGGAACAGCACCCAA+AGG 0.615458 5_1:-8776811 None:intergenic
GAACGACCAGGAAGATGATG+AGG 0.618052 5_1:+8777654 Msa0715700:CDS
ACAACTGAAGAGAAAAGTGA+TGG 0.620986 5_1:+8778808 Msa0715700:CDS
CGAGACTAATAACTCAATTG+CGG 0.622926 5_1:+8778364 Msa0715700:CDS
ATTGCTTGCAAAAGATGCAG+TGG 0.625303 5_1:-8776902 None:intergenic
AGTTGATATACTATCAACAT+TGG 0.628260 5_1:+8777798 Msa0715700:CDS
GCAGAAATTGAAACTCTCGC+AGG 0.629007 5_1:+8778395 Msa0715700:CDS
AGCCTTCTCCAAATAAGCAA+CGG 0.630794 5_1:-8778270 None:intergenic
GATACTGAAGAGTTGGCAGA+AGG 0.634606 5_1:+8777682 Msa0715700:CDS
GGTTGGTTGAGGCATTGTGA+CGG 0.637516 5_1:-8775567 None:intergenic
AACCACCGTCAACCCCGCCG+TGG 0.638823 5_1:+8775637 Msa0715700:CDS
TTGGCTACAGAGAACAGCAG+TGG 0.641006 5_1:+8778640 Msa0715700:CDS
TGAACCTGATCTCAAGAGCA+CGG 0.642142 5_1:-8775793 None:intergenic
TTCCTGAAAACAGTCAACCA+TGG 0.642562 5_1:-8778927 None:intergenic
ATCTCTCTCTGACTACCAGA+AGG 0.643674 5_1:+8777949 Msa0715700:CDS
AGAAGGCGATGAAGACGAGT+CGG 0.649318 5_1:+8777699 Msa0715700:CDS
TGCTTGTAACGAGATAACCT+TGG 0.652594 5_1:-8778992 None:intergenic
AAGCAGGAGGAGTCTCCACA+TGG 0.654637 5_1:+8776832 Msa0715700:CDS
ACTGAAGAGAAAAGTGATGG+TGG 0.655582 5_1:+8778811 Msa0715700:CDS
GGACGTGACTTCAAACAACC+AGG 0.655621 5_1:+8776933 Msa0715700:CDS
ACTGTTATACAAGGCTCAGG+AGG 0.655923 5_1:+8776780 Msa0715700:CDS
CTGATGAGCTGATGGAAAAG+GGG 0.660406 5_1:+8775720 Msa0715700:CDS
TGCTGTTCCCAAGAAGCAGG+AGG 0.664556 5_1:+8776819 Msa0715700:CDS
TGAGATTCTAGCATCTGCCA+AGG 0.664765 5_1:+8778570 Msa0715700:CDS
TCAAAATAATAATCATGACA+AGG 0.667146 5_1:-8778031 None:intergenic
CAGGAGTCAGAAGTGGACAA+TGG 0.675049 5_1:+8776952 Msa0715700:CDS
AGTTGCGGCGGATTCCACGG+CGG 0.675466 5_1:-8775651 None:intergenic
AGTGTCCGGTAAGAACGACC+AGG 0.691630 5_1:+8777642 Msa0715700:intron
GCGATCATCAAATGCCAGCG+TGG 0.691972 5_1:+8778750 Msa0715700:CDS
AAATTCTCCCAAAATCACCA+TGG 0.703338 5_1:+8775514 Msa0715700:exon
GTTCTCTGTAGCCAACTGTG+AGG 0.704965 5_1:-8778632 None:intergenic
TTGCGGCGGATTCCACGGCG+GGG 0.708348 5_1:-8775649 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAAATAAATGTAAGA+TGG - chr5_1:8777854-8777873 None:intergenic 10.0%
!!! TTTTTTATTAACATTTAAAC+AGG - chr5_1:8778085-8778104 None:intergenic 10.0%
!!! TATGTTATTTTTATATAACA+TGG + chr5_1:8778483-8778502 Msa0715700:intron 10.0%
!!! TAATATCTGAAATTTGAAAT+AGG + chr5_1:8776426-8776445 Msa0715700:intron 15.0%
!! TTAGTTATCATAACAATATT+GGG + chr5_1:8776496-8776515 Msa0715700:intron 15.0%
!! ATTAATAATTTCTCCAATTT+AGG + chr5_1:8778146-8778165 Msa0715700:intron 15.0%
!! GAAAAATGAAAGTGAAATTA+AGG - chr5_1:8775389-8775408 None:intergenic 20.0%
!!! ATAGACATTTTATTCTCAAA+AGG + chr5_1:8776305-8776324 Msa0715700:intron 20.0%
!! TATTAATTGATGAAACGAAA+TGG + chr5_1:8776390-8776409 Msa0715700:intron 20.0%
!! CTTAGTTATCATAACAATAT+TGG + chr5_1:8776495-8776514 Msa0715700:intron 20.0%
!!! CATATAATTGATTTGTACAT+GGG - chr5_1:8776618-8776637 None:intergenic 20.0%
!!! ACATATAATTGATTTGTACA+TGG - chr5_1:8776619-8776638 None:intergenic 20.0%
!!! ACTAAAATGAGAACATTTTA+CGG + chr5_1:8777010-8777029 Msa0715700:intron 20.0%
!!! AATAGATAGAAAGTGTTTTA+TGG + chr5_1:8777114-8777133 Msa0715700:intron 20.0%
!!! ATTATTTCTTTCACTTTTCT+TGG + chr5_1:8777535-8777554 Msa0715700:intron 20.0%
!! TCAAAATAATAATCATGACA+AGG - chr5_1:8778034-8778053 None:intergenic 20.0%
!!! ATTTCTTATTTCACAAGTTA+AGG - chr5_1:8778204-8778223 None:intergenic 20.0%
!! TTTATATAACATGGAATGTA+TGG + chr5_1:8778492-8778511 Msa0715700:intron 20.0%
!!! AAAAACCTTGAGAATTTTTA+TGG + chr5_1:8779041-8779060 Msa0715700:three_prime_UTR 20.0%
!! TAAATCCATAAAAATTCTCA+AGG - chr5_1:8779049-8779068 None:intergenic 20.0%
! GAAATTAAGGAAAAAACTAC+CGG - chr5_1:8775376-8775395 None:intergenic 25.0%
!!! GGGTTTTAAGATTTTCTTTA+TGG - chr5_1:8775421-8775440 None:intergenic 25.0%
!! GATCTTTAGGTTAAATGATT+TGG + chr5_1:8775914-8775933 Msa0715700:intron 25.0%
!! TAAATGATTTGGAATTGAGT+TGG + chr5_1:8775925-8775944 Msa0715700:intron 25.0%
!!! ATTTTTTTGCATAAGCTATG+TGG - chr5_1:8776171-8776190 None:intergenic 25.0%
! AATATTTGAAAATGCAGAAG+TGG - chr5_1:8776358-8776377 None:intergenic 25.0%
!!! AAATGTTCTCATTTTAGTGA+AGG - chr5_1:8777008-8777027 None:intergenic 25.0%
!!! TGGCAATGTTTTTTAATGAA+AGG + chr5_1:8777134-8777153 Msa0715700:intron 25.0%
!!! GGCAATGTTTTTTAATGAAA+GGG + chr5_1:8777135-8777154 Msa0715700:intron 25.0%
! TTCCTTATTCTCTATTTATG+TGG + chr5_1:8777171-8777190 Msa0715700:intron 25.0%
! TTCCACATAAATAGAGAATA+AGG - chr5_1:8777176-8777195 None:intergenic 25.0%
!! AGTTGATATACTATCAACAT+TGG + chr5_1:8777798-8777817 Msa0715700:CDS 25.0%
!!! ACAATTCAACTTTTAGAACT+GGG - chr5_1:8777894-8777913 None:intergenic 25.0%
!!! AACAATTCAACTTTTAGAAC+TGG - chr5_1:8777895-8777914 None:intergenic 25.0%
! TCTAAAAGTTGAATTGTTTC+TGG + chr5_1:8777897-8777916 Msa0715700:intron 25.0%
!! CTAAAAGTTGAATTGTTTCT+GGG + chr5_1:8777898-8777917 Msa0715700:intron 25.0%
! ATCTACAGTGATGAAAAATA+TGG - chr5_1:8778962-8778981 None:intergenic 25.0%
!!! AAATTCTCAAGGTTTTTTCT+AGG - chr5_1:8779038-8779057 None:intergenic 25.0%
! GAACATGCATATAATACTAA+CGG - chr5_1:8779080-8779099 None:intergenic 25.0%
! ATTATATGCATGTTCCTTTA+AGG + chr5_1:8779085-8779104 Msa0715700:three_prime_UTR 25.0%
GCTTAATTGTGAATGAAACT+GGG - chr5_1:8776013-8776032 None:intergenic 30.0%
AGCTTAATTGTGAATGAAAC+TGG - chr5_1:8776014-8776033 None:intergenic 30.0%
!! CCAATGCTTTCGTATTTTAA+AGG - chr5_1:8776043-8776062 None:intergenic 30.0%
!! CCTTTAAAATACGAAAGCAT+TGG + chr5_1:8776040-8776059 Msa0715700:intron 30.0%
! GTGGTTTTCATTAGTTATCT+TGG - chr5_1:8776152-8776171 None:intergenic 30.0%
CTATAATCAAGCAATTAAGC+AGG - chr5_1:8776289-8776308 None:intergenic 30.0%
! TCTGAAATTTGAAATAGGTC+AGG + chr5_1:8776431-8776450 Msa0715700:intron 30.0%
! CTGAAATTTGAAATAGGTCA+GGG + chr5_1:8776432-8776451 Msa0715700:intron 30.0%
! TGAAATTTGAAATAGGTCAG+GGG + chr5_1:8776433-8776452 Msa0715700:intron 30.0%
AACAATATTGGGAAACTCTT+TGG + chr5_1:8776507-8776526 Msa0715700:intron 30.0%
AACATTCAAACGTTCTTGTA+TGG - chr5_1:8776642-8776661 None:intergenic 30.0%
AACCATATTTGTAGTATGTG+TGG - chr5_1:8776756-8776775 None:intergenic 30.0%
! TGAGAACATTTTACGGAATT+TGG + chr5_1:8777017-8777036 Msa0715700:intron 30.0%
TATTTGACATGATGAGTAGA+AGG - chr5_1:8777095-8777114 None:intergenic 30.0%
!! AGTAAACAGTTGATAACTCA+AGG - chr5_1:8777207-8777226 None:intergenic 30.0%
ACGTAAAATGCTTTAACCAT+GGG - chr5_1:8777393-8777412 None:intergenic 30.0%
TACGTAAAATGCTTTAACCA+TGG - chr5_1:8777394-8777413 None:intergenic 30.0%
TTTGCTAGCTATCACAAATA+TGG - chr5_1:8777487-8777506 None:intergenic 30.0%
TAATCACCTAAGTTGTAGTT+TGG + chr5_1:8777574-8777593 Msa0715700:intron 30.0%
! TATCAACTTGTTCCATAGTA+TGG - chr5_1:8777786-8777805 None:intergenic 30.0%
!!! CAATTCAACTTTTAGAACTG+GGG - chr5_1:8777893-8777912 None:intergenic 30.0%
AAAATGAAACAACATACGAG+TGG + chr5_1:8778101-8778120 Msa0715700:intron 30.0%
TTTGTATGGAATGATGAGTT+TGG + chr5_1:8778864-8778883 Msa0715700:three_prime_UTR 30.0%
ACATATTCTTGCAAATTCCA+TGG + chr5_1:8778910-8778929 Msa0715700:three_prime_UTR 30.0%
! AATTTGCTCAATGAGGGTTT+GGG - chr5_1:8775449-8775468 None:intergenic 35.0%
! TGGTTCAATTTGCTCAATGA+GGG - chr5_1:8775455-8775474 None:intergenic 35.0%
! TTGGTTCAATTTGCTCAATG+AGG - chr5_1:8775456-8775475 None:intergenic 35.0%
! AAGAGGGAAAGTTGAGATTT+TGG - chr5_1:8775475-8775494 None:intergenic 35.0%
GAGAGAGAAAAATGAGAAGA+GGG - chr5_1:8775491-8775510 None:intergenic 35.0%
AAATTCTCCCAAAATCACCA+TGG + chr5_1:8775514-8775533 Msa0715700:exon 35.0%
! TCTTCTACCATGGTGATTTT+GGG - chr5_1:8775524-8775543 None:intergenic 35.0%
! TTCTTCTACCATGGTGATTT+TGG - chr5_1:8775525-8775544 None:intergenic 35.0%
ACCAAAATCATTCTCCTTCA+TGG - chr5_1:8775753-8775772 None:intergenic 35.0%
ATGCGTTGAGTTTGATCTTT+AGG + chr5_1:8775901-8775920 Msa0715700:intron 35.0%
! TGCATGTTCTCAGTGTTTTA+TGG + chr5_1:8775961-8775980 Msa0715700:intron 35.0%
TAAGATGCAAATTCTGTGCT+AGG + chr5_1:8776254-8776273 Msa0715700:intron 35.0%
AAATAGGTCAGGGGTTATTA+TGG + chr5_1:8776442-8776461 Msa0715700:intron 35.0%
AAAATGAAATCTCTGCTGGT+GGG - chr5_1:8776571-8776590 None:intergenic 35.0%
AAAAATGAAATCTCTGCTGG+TGG - chr5_1:8776572-8776591 None:intergenic 35.0%
GACAAAAATGAAATCTCTGC+TGG - chr5_1:8776575-8776594 None:intergenic 35.0%
GTCCACACATACTACAAATA+TGG + chr5_1:8776751-8776770 Msa0715700:CDS 35.0%
! TTTTGCAAGCAATATTGAGC+AGG + chr5_1:8776912-8776931 Msa0715700:CDS 35.0%
CAACTGTTTACTCAAGACAT+AGG + chr5_1:8777215-8777234 Msa0715700:intron 35.0%
GTTTACTCAAGACATAGGAT+AGG + chr5_1:8777220-8777239 Msa0715700:intron 35.0%
AGGAAAAAGTTCCCTGATTA+GGG - chr5_1:8777273-8777292 None:intergenic 35.0%
AAGGAAAAAGTTCCCTGATT+AGG - chr5_1:8777274-8777293 None:intergenic 35.0%
TTGAAATGTGAAACAGTGTC+CGG + chr5_1:8777628-8777647 Msa0715700:intron 35.0%
!! GACAGATTGCTTTTCAACAA+TGG - chr5_1:8777764-8777783 None:intergenic 35.0%
AAAGCAATCTGTCCATACTA+TGG + chr5_1:8777771-8777790 Msa0715700:CDS 35.0%
AGAGATGTTTCAAAATCCTC+TGG - chr5_1:8777935-8777954 None:intergenic 35.0%
! TCAGCAATGTTTCTATCATC+TGG - chr5_1:8778004-8778023 None:intergenic 35.0%
CACAATTGGTCATCCTAAAT+TGG - chr5_1:8778162-8778181 None:intergenic 35.0%
TTTCCGTATATGCTTGTGTT+TGG + chr5_1:8778223-8778242 Msa0715700:CDS 35.0%
! CGCAATTGAGTTATTAGTCT+CGG - chr5_1:8778366-8778385 None:intergenic 35.0%
CGAGACTAATAACTCAATTG+CGG + chr5_1:8778364-8778383 Msa0715700:CDS 35.0%
!! TCTCAGCGAGAATTGATTTT+GGG - chr5_1:8778555-8778574 None:intergenic 35.0%
!! ATCTCAGCGAGAATTGATTT+TGG - chr5_1:8778556-8778575 None:intergenic 35.0%
!! TCTTCAGTTGTTTCTAATGC+TGG - chr5_1:8778799-8778818 None:intergenic 35.0%
ACAACTGAAGAGAAAAGTGA+TGG + chr5_1:8778808-8778827 Msa0715700:CDS 35.0%
TTTGGCGACTCTTTGAATTA+TGG + chr5_1:8778882-8778901 Msa0715700:three_prime_UTR 35.0%
CGACTCTTTGAATTATGGAT+AGG + chr5_1:8778887-8778906 Msa0715700:three_prime_UTR 35.0%
TGTAGATTTATGTGTAGCCA+AGG + chr5_1:8778975-8778994 Msa0715700:three_prime_UTR 35.0%
!! ATGCATGTTCCTTTAAGGTT+TGG + chr5_1:8779090-8779109 Msa0715700:three_prime_UTR 35.0%
AATTAAGCGCCAAACCTTAA+AGG - chr5_1:8779102-8779121 None:intergenic 35.0%
TTAAGGTTTGGCGCTTAATT+AGG + chr5_1:8779102-8779121 Msa0715700:three_prime_UTR 35.0%
!! TCAATGAGGGTTTGGGTTTT+GGG - chr5_1:8775442-8775461 None:intergenic 40.0%
! CAATTTGCTCAATGAGGGTT+TGG - chr5_1:8775450-8775469 None:intergenic 40.0%
CGAGAGAGAAAAATGAGAAG+AGG - chr5_1:8775492-8775511 None:intergenic 40.0%
AGTTGGAGTTTCTTCTACCA+TGG - chr5_1:8775534-8775553 None:intergenic 40.0%
ACCCTAAACCACGACAAAAA+CGG + chr5_1:8775614-8775633 Msa0715700:CDS 40.0%
!! TCCGTTTTTGTCGTGGTTTA+GGG - chr5_1:8775618-8775637 None:intergenic 40.0%
!! TTCCGTTTTTGTCGTGGTTT+AGG - chr5_1:8775619-8775638 None:intergenic 40.0%
! GCCATGAAGGAGAATGATTT+TGG + chr5_1:8775749-8775768 Msa0715700:CDS 40.0%
TTGAGATCAGGTTCAATTCG+TGG + chr5_1:8775801-8775820 Msa0715700:intron 40.0%
TGCAAATTCTGTGCTAGGAA+TGG + chr5_1:8776259-8776278 Msa0715700:intron 40.0%
TGTCAACCTGATGCTCTTAT+AGG + chr5_1:8776591-8776610 Msa0715700:intron 40.0%
ATCAACAGAGTTGCCCATTA+TGG + chr5_1:8776709-8776728 Msa0715700:intron 40.0%
TGGTTGTGCACTGTTATACA+AGG + chr5_1:8776771-8776790 Msa0715700:CDS 40.0%
ATTGCTTGCAAAAGATGCAG+TGG - chr5_1:8776905-8776924 None:intergenic 40.0%
TATAACACAGACAGCAAACG+CGG - chr5_1:8777069-8777088 None:intergenic 40.0%
! ATGTTTTCTGTGCCCTAATC+AGG + chr5_1:8777258-8777277 Msa0715700:intron 40.0%
! TGTTTTCTGTGCCCTAATCA+GGG + chr5_1:8777259-8777278 Msa0715700:intron 40.0%
ATGCACACGTATCAAAGAGA+AGG - chr5_1:8777293-8777312 None:intergenic 40.0%
ACACTACCTCCTGAATTGTT+GGG + chr5_1:8777425-8777444 Msa0715700:intron 40.0%
TTCTCGCCAAACTACAACTT+AGG - chr5_1:8777583-8777602 None:intergenic 40.0%
GGATAGTGATACTGAAGAGT+TGG + chr5_1:8777675-8777694 Msa0715700:CDS 40.0%
CCTCCAAACACAAGCATATA+CGG - chr5_1:8778229-8778248 None:intergenic 40.0%
AGCCTTCTCCAAATAAGCAA+CGG - chr5_1:8778273-8778292 None:intergenic 40.0%
GAAGGCTACATCTGTTTGTA+AGG + chr5_1:8778286-8778305 Msa0715700:CDS 40.0%
CTCAAGTGAACTGGAAAAGA+AGG + chr5_1:8778421-8778440 Msa0715700:CDS 40.0%
! TCACACATCTTGGTGTAGTA+GGG + chr5_1:8778716-8778735 Msa0715700:CDS 40.0%
ACTGAAGAGAAAAGTGATGG+TGG + chr5_1:8778811-8778830 Msa0715700:CDS 40.0%
TGGCAACGCATGATTTATAC+TGG + chr5_1:8778831-8778850 Msa0715700:exon 40.0%
! CTGGTCTCAGTTCTTTTGTA+TGG + chr5_1:8778850-8778869 Msa0715700:three_prime_UTR 40.0%
! TTCCATGGTTGACTGTTTTC+AGG + chr5_1:8778925-8778944 Msa0715700:three_prime_UTR 40.0%
TTCCTGAAAACAGTCAACCA+TGG - chr5_1:8778930-8778949 None:intergenic 40.0%
TGCTTGTAACGAGATAACCT+TGG - chr5_1:8778995-8779014 None:intergenic 40.0%
CCTTTGCAATTTCAGAGAGC+CGG + chr5_1:8775354-8775373 Msa0715700:five_prime_UTR 45.0%
!! CAATGAGGGTTTGGGTTTTG+GGG - chr5_1:8775441-8775460 None:intergenic 45.0%
!! CTCAATGAGGGTTTGGGTTT+TGG - chr5_1:8775443-8775462 None:intergenic 45.0%
GCTGATGAGCTGATGGAAAA+GGG + chr5_1:8775719-8775738 Msa0715700:CDS 45.0%
CTGATGAGCTGATGGAAAAG+GGG + chr5_1:8775720-8775739 Msa0715700:CDS 45.0%
AAAGGGGAACAAAGCCATGA+AGG + chr5_1:8775736-8775755 Msa0715700:CDS 45.0%
TGAACCTGATCTCAAGAGCA+CGG - chr5_1:8775796-8775815 None:intergenic 45.0%
!!! CCTACGTTTTGTTTTGACGC+GGG - chr5_1:8776068-8776087 None:intergenic 45.0%
!!! CCCTACGTTTTGTTTTGACG+CGG - chr5_1:8776069-8776088 None:intergenic 45.0%
CCGCGTCAAAACAAAACGTA+GGG + chr5_1:8776066-8776085 Msa0715700:intron 45.0%
AACAAAACGTAGGGCCTGTT+TGG + chr5_1:8776075-8776094 Msa0715700:intron 45.0%
TAGGGCCTGTTTGGATTGTT+TGG + chr5_1:8776084-8776103 Msa0715700:intron 45.0%
AGGGCCTGTTTGGATTGTTT+GGG + chr5_1:8776085-8776104 Msa0715700:intron 45.0%
GTCTCCCAAACAATCCAAAC+AGG - chr5_1:8776092-8776111 None:intergenic 45.0%
AGGTCAGGGGTTATTATGGA+TGG + chr5_1:8776446-8776465 Msa0715700:intron 45.0%
!! ATGGGTCCTATAAGAGCATC+AGG - chr5_1:8776600-8776619 None:intergenic 45.0%
GGGAGCAAGTTCACCATAAT+GGG - chr5_1:8776725-8776744 None:intergenic 45.0%
TAGTATGTGTGGACACACTC+GGG - chr5_1:8776745-8776764 None:intergenic 45.0%
GTAGTATGTGTGGACACACT+CGG - chr5_1:8776746-8776765 None:intergenic 45.0%
TGCACTGTTATACAAGGCTC+AGG + chr5_1:8776777-8776796 Msa0715700:CDS 45.0%
ACTGTTATACAAGGCTCAGG+AGG + chr5_1:8776780-8776799 Msa0715700:CDS 45.0%
CTTCACAGGTCCATCTTTGT+CGG - chr5_1:8776860-8776879 None:intergenic 45.0%
GACAAAGATGGACCTGTGAA+GGG + chr5_1:8776859-8776878 Msa0715700:CDS 45.0%
AAACAACCAGGAGTCAGAAG+TGG + chr5_1:8776945-8776964 Msa0715700:CDS 45.0%
CTTTGATACGTGTGCATGAC+TGG + chr5_1:8777296-8777315 Msa0715700:intron 45.0%
TGCATGACTGGCACTTATTG+TGG + chr5_1:8777308-8777327 Msa0715700:intron 45.0%
GCATGACTGGCACTTATTGT+GGG + chr5_1:8777309-8777328 Msa0715700:intron 45.0%
CATGACTGGCACTTATTGTG+GGG + chr5_1:8777310-8777329 Msa0715700:intron 45.0%
GACACTACCTCCTGAATTGT+TGG + chr5_1:8777424-8777443 Msa0715700:intron 45.0%
TCTACTCCCAACAATTCAGG+AGG - chr5_1:8777434-8777453 None:intergenic 45.0%
GTGTCTACTCCCAACAATTC+AGG - chr5_1:8777437-8777456 None:intergenic 45.0%
ATCTTCCTGGTCGTTCTTAC+CGG - chr5_1:8777650-8777669 None:intergenic 45.0%
CACTATCCTCATCATCTTCC+TGG - chr5_1:8777663-8777682 None:intergenic 45.0%
GATACTGAAGAGTTGGCAGA+AGG + chr5_1:8777682-8777701 Msa0715700:CDS 45.0%
! GCATTTTCCATGCCAAATCC+AGG - chr5_1:8777726-8777745 None:intergenic 45.0%
AACATTGGCAGATGTTGCTC+TGG + chr5_1:8777813-8777832 Msa0715700:CDS 45.0%
AGAACTGGGGTAGAGAGAAT+TGG - chr5_1:8777880-8777899 None:intergenic 45.0%
!!! CTGGGTTCTGTTTTTTCCAG+AGG + chr5_1:8777916-8777935 Msa0715700:intron 45.0%
ATCTCTCTCTGACTACCAGA+AGG + chr5_1:8777949-8777968 Msa0715700:CDS 45.0%
TCTATCCATCCTAGAACAGC+TGG + chr5_1:8777973-8777992 Msa0715700:CDS 45.0%
!! TTCAACCAGCTGTTCTAGGA+TGG - chr5_1:8777981-8778000 None:intergenic 45.0%
! TAGCAGTGGAAGAGCACAAT+TGG - chr5_1:8778176-8778195 None:intergenic 45.0%
AAGTTAAGGCTGTCTAGCAG+TGG - chr5_1:8778190-8778209 None:intergenic 45.0%
CCGTATATGCTTGTGTTTGG+AGG + chr5_1:8778226-8778245 Msa0715700:CDS 45.0%
! GGAGGTTAGTTCAAAACCTG+AGG + chr5_1:8778244-8778263 Msa0715700:CDS 45.0%
AAATAAGCAACGGCTTCCTC+AGG - chr5_1:8778263-8778282 None:intergenic 45.0%
TGAGGAAGCCGTTGCTTATT+TGG + chr5_1:8778262-8778281 Msa0715700:CDS 45.0%
AGCCGTTGCTTATTTGGAGA+AGG + chr5_1:8778268-8778287 Msa0715700:CDS 45.0%
GCAGAAATTGAAACTCTCGC+AGG + chr5_1:8778395-8778414 Msa0715700:CDS 45.0%
TGAGATTCTAGCATCTGCCA+AGG + chr5_1:8778570-8778589 Msa0715700:CDS 45.0%
ATTGGTGTGAGCGGTTGAAA+TGG - chr5_1:8778683-8778702 None:intergenic 45.0%
ATTTCAACCGCTCACACCAA+TGG + chr5_1:8778682-8778701 Msa0715700:CDS 45.0%
! GTCACACATCTTGGTGTAGT+AGG + chr5_1:8778715-8778734 Msa0715700:CDS 45.0%
!! CCGGCTCTCTGAAATTGCAA+AGG - chr5_1:8775357-8775376 None:intergenic 50.0%
ACGGAAGTCTCAGATGCAGT+TGG - chr5_1:8775551-8775570 None:intergenic 50.0%
!! GGTTGGTTGAGGCATTGTGA+CGG - chr5_1:8775570-8775589 None:intergenic 50.0%
GGCTGATGAGCTGATGGAAA+AGG + chr5_1:8775718-8775737 Msa0715700:CDS 50.0%
ATAGCCGTGCTCTTGAGATC+AGG + chr5_1:8775789-8775808 Msa0715700:CDS 50.0%
CCCGCGTCAAAACAAAACGT+AGG + chr5_1:8776065-8776084 Msa0715700:intron 50.0%
CGGGAGCAAGTTCACCATAA+TGG - chr5_1:8776726-8776745 None:intergenic 50.0%
TTCTTGGGAACAGCACCCAA+AGG - chr5_1:8776814-8776833 None:intergenic 50.0%
CGACAAAGATGGACCTGTGA+AGG + chr5_1:8776858-8776877 Msa0715700:CDS 50.0%
GCATTCATAGCACCCTTCAC+AGG - chr5_1:8776874-8776893 None:intergenic 50.0%
GGACGTGACTTCAAACAACC+AGG + chr5_1:8776933-8776952 Msa0715700:CDS 50.0%
CATTGTCCACTTCTGACTCC+TGG - chr5_1:8776954-8776973 None:intergenic 50.0%
CAGGAGTCAGAAGTGGACAA+TGG + chr5_1:8776952-8776971 Msa0715700:CDS 50.0%
! CATGGGCTTTTTGTACCCCA+CGG - chr5_1:8777376-8777395 None:intergenic 50.0%
GAACGACCAGGAAGATGATG+AGG + chr5_1:8777654-8777673 Msa0715700:CDS 50.0%
AGAAGGCGATGAAGACGAGT+CGG + chr5_1:8777699-8777718 Msa0715700:CDS 50.0%
!! GCAGATGTTGCTCTGGAAAG+AGG + chr5_1:8777820-8777839 Msa0715700:CDS 50.0%
CTAGGATGGATAGAGCCTTC+TGG - chr5_1:8777967-8777986 None:intergenic 50.0%
CTGGTTCAACCAGCTGTTCT+AGG - chr5_1:8777985-8778004 None:intergenic 50.0%
ATTCTAGCATCTGCCAAGGC+AGG + chr5_1:8778574-8778593 Msa0715700:CDS 50.0%
GAGCTCACTCTTGCTAGAGA+TGG - chr5_1:8778613-8778632 None:intergenic 50.0%
AAGAGTGAGCTCCTCACAGT+TGG + chr5_1:8778621-8778640 Msa0715700:CDS 50.0%
GTTCTCTGTAGCCAACTGTG+AGG - chr5_1:8778635-8778654 None:intergenic 50.0%
TTGGCTACAGAGAACAGCAG+TGG + chr5_1:8778640-8778659 Msa0715700:CDS 50.0%
GTGTGAGCGGTTGAAATGGT+TGG - chr5_1:8778679-8778698 None:intergenic 50.0%
AGCAGATCCATTGGTGTGAG+CGG - chr5_1:8778692-8778711 None:intergenic 50.0%
TGTGACTCCAGCAGATCCAT+TGG - chr5_1:8778701-8778720 None:intergenic 50.0%
TCTGCTGGAGTCACACATCT+TGG + chr5_1:8778706-8778725 Msa0715700:CDS 50.0%
! CATCTTGGTGTAGTAGGGAG+AGG + chr5_1:8778721-8778740 Msa0715700:CDS 50.0%
! GTGACAGGTTCGGTTGGTTG+AGG - chr5_1:8775581-8775600 None:intergenic 55.0%
! GTGGTTTAGGGTTCCGTCGA+CGG - chr5_1:8775606-8775625 None:intergenic 55.0%
!! CGGTGGTTCCGTTTTTGTCG+TGG - chr5_1:8775625-8775644 None:intergenic 55.0%
! AGAAGTTGCGGCGGATTCCA+CGG - chr5_1:8775657-8775676 None:intergenic 55.0%
CGGTCAGAAGTCTCTGGACA+TGG + chr5_1:8775697-8775716 Msa0715700:CDS 55.0%
GGACATGGCTGATGAGCTGA+TGG + chr5_1:8775712-8775731 Msa0715700:CDS 55.0%
TCAGGAGGAAGCCGATCCTT+TGG + chr5_1:8776795-8776814 Msa0715700:CDS 55.0%
CAGGAGGAAGCCGATCCTTT+GGG + chr5_1:8776796-8776815 Msa0715700:CDS 55.0%
GGGAACAGCACCCAAAGGAT+CGG - chr5_1:8776809-8776828 None:intergenic 55.0%
TGCTGTTCCCAAGAAGCAGG+AGG + chr5_1:8776819-8776838 Msa0715700:CDS 55.0%
GGAGACTCCTCCTGCTTCTT+GGG - chr5_1:8776829-8776848 None:intergenic 55.0%
TGGAGACTCCTCCTGCTTCT+TGG - chr5_1:8776830-8776849 None:intergenic 55.0%
AAGCAGGAGGAGTCTCCACA+TGG + chr5_1:8776832-8776851 Msa0715700:CDS 55.0%
CTCAGAGTCTGTGACGTGTG+CGG + chr5_1:8777343-8777362 Msa0715700:intron 55.0%
CGTGGGGTACAAAAAGCCCA+TGG + chr5_1:8777374-8777393 Msa0715700:intron 55.0%
AGTGTCCGGTAAGAACGACC+AGG + chr5_1:8777642-8777661 Msa0715700:intron 55.0%
AGACGAGTCGGACCTGGATT+TGG + chr5_1:8777711-8777730 Msa0715700:CDS 55.0%
AGTCGGACCTGGATTTGGCA+TGG + chr5_1:8777716-8777735 Msa0715700:CDS 55.0%
CGCAGGTCTCTCAAGTGAAC+TGG + chr5_1:8778412-8778431 Msa0715700:CDS 55.0%
TTCCTTTCCACTGCCTGCCT+TGG - chr5_1:8778590-8778609 None:intergenic 55.0%
GCTCACACCAATGGATCTGC+TGG + chr5_1:8778691-8778710 Msa0715700:CDS 55.0%
GCGATCATCAAATGCCAGCG+TGG + chr5_1:8778750-8778769 Msa0715700:CDS 55.0%
AATGCTTGCTTCTGCCACGC+TGG - chr5_1:8778767-8778786 None:intergenic 55.0%
! ACGGCTGTGACAGGTTCGGT+TGG - chr5_1:8775587-8775606 None:intergenic 60.0%
GTCGACGGCTGTGACAGGTT+CGG - chr5_1:8775591-8775610 None:intergenic 60.0%
GAACCTGTCACAGCCGTCGA+CGG + chr5_1:8775590-8775609 Msa0715700:CDS 60.0%
ATCCGCCGCAACTTCTGCTC+CGG + chr5_1:8775661-8775680 Msa0715700:CDS 60.0%
AGACTTCTGACCGTCGCTGC+TGG - chr5_1:8775690-8775709 None:intergenic 60.0%
CAGCGACGGTCAGAAGTCTC+TGG + chr5_1:8775691-8775710 Msa0715700:CDS 60.0%
!! GGGTGCTGTTCCCAAGAAGC+AGG + chr5_1:8776816-8776835 Msa0715700:CDS 60.0%
CCATCTTTGTCGGCGCCATG+TGG - chr5_1:8776850-8776869 None:intergenic 60.0%
!! CCACATGGCGCCGACAAAGA+TGG + chr5_1:8776847-8776866 Msa0715700:CDS 60.0%
! ACGTGTGCGGACTAAGTCCG+TGG + chr5_1:8777356-8777375 Msa0715700:intron 60.0%
! CGTGTGCGGACTAAGTCCGT+GGG + chr5_1:8777357-8777376 Msa0715700:intron 60.0%
! GTGTGCGGACTAAGTCCGTG+GGG + chr5_1:8777358-8777377 Msa0715700:intron 60.0%
CGATGAAGACGAGTCGGACC+TGG + chr5_1:8777705-8777724 Msa0715700:CDS 60.0%
TGCCAAGGCAGGCAGTGGAA+AGG + chr5_1:8778585-8778604 Msa0715700:CDS 60.0%
GTTCCGTCGACGGCTGTGAC+AGG - chr5_1:8775596-8775615 None:intergenic 65.0%
GGATTCCACGGCGGGGTTGA+CGG - chr5_1:8775645-8775664 None:intergenic 65.0%
! AGTTGCGGCGGATTCCACGG+CGG - chr5_1:8775654-8775673 None:intergenic 65.0%
GGACGCCGGAGCAGAAGTTG+CGG - chr5_1:8775669-8775688 None:intergenic 65.0%
GCATCTGCCAAGGCAGGCAG+TGG + chr5_1:8778580-8778599 Msa0715700:CDS 65.0%
AACCACCGTCAACCCCGCCG+TGG + chr5_1:8775637-8775656 Msa0715700:CDS 70.0%
TTCCACGGCGGGGTTGACGG+TGG - chr5_1:8775642-8775661 None:intergenic 70.0%
! TTGCGGCGGATTCCACGGCG+GGG - chr5_1:8775652-8775671 None:intergenic 70.0%
! GTTGCGGCGGATTCCACGGC+GGG - chr5_1:8775653-8775672 None:intergenic 70.0%
CGCCGGAGCAGAAGTTGCGG+CGG - chr5_1:8775666-8775685 None:intergenic 70.0%
TGACCGTCGCTGCTGGACGC+CGG - chr5_1:8775683-8775702 None:intergenic 70.0%
GCTCCGGCGTCCAGCAGCGA+CGG + chr5_1:8775677-8775696 Msa0715700:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 8775354 8779151 8775354 ID=Msa0715700;Name=Msa0715700
chr5_1 mRNA 8775354 8779151 8775354 ID=Msa0715700-mRNA-1;Parent=Msa0715700;Name=Msa0715700-mRNA-1;_AED=0.17;_eAED=0.17;_QI=179|0.8|0.66|1|1|1|6|308|472
chr5_1 exon 8775354 8775810 8775354 ID=Msa0715700-mRNA-1:exon:3582;Parent=Msa0715700-mRNA-1
chr5_1 exon 8776717 8776973 8776717 ID=Msa0715700-mRNA-1:exon:3583;Parent=Msa0715700-mRNA-1
chr5_1 exon 8777644 8777841 8777644 ID=Msa0715700-mRNA-1:exon:3584;Parent=Msa0715700-mRNA-1
chr5_1 exon 8777936 8778054 8777936 ID=Msa0715700-mRNA-1:exon:3585;Parent=Msa0715700-mRNA-1
chr5_1 exon 8778197 8778442 8778197 ID=Msa0715700-mRNA-1:exon:3586;Parent=Msa0715700-mRNA-1
chr5_1 exon 8778523 8779151 8778523 ID=Msa0715700-mRNA-1:exon:3587;Parent=Msa0715700-mRNA-1
chr5_1 five_prime_UTR 8775354 8775532 8775354 ID=Msa0715700-mRNA-1:five_prime_utr;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8775533 8775810 8775533 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8776717 8776973 8776717 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8777644 8777841 8777644 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8777936 8778054 8777936 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8778197 8778442 8778197 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 CDS 8778523 8778843 8778523 ID=Msa0715700-mRNA-1:cds;Parent=Msa0715700-mRNA-1
chr5_1 three_prime_UTR 8778844 8779151 8778844 ID=Msa0715700-mRNA-1:three_prime_utr;Parent=Msa0715700-mRNA-1
Gene Sequence

>Msa0715700

ATGGTAGAAGAAACTCCAACTGCATCTGAGACTTCCGTCACAATGCCTCAACCAACCGAACCTGTCACAGCCGTCGACGGAACCCTAAACCACGACAAAAACGGAACCACCGTCAACCCCGCCGTGGAATCCGCCGCAACTTCTGCTCCGGCGTCCAGCAGCGACGGTCAGAAGTCTCTGGACATGGCTGATGAGCTGATGGAAAAGGGGAACAAAGCCATGAAGGAGAATGATTTTGGTGAAGCTGCTGATAATTATAGCCGTGCTCTTGAGATCAGAGTTGCCCATTATGGTGAACTTGCTCCCGAGTGTGTCCACACATACTACAAATATGGTTGTGCACTGTTATACAAGGCTCAGGAGGAAGCCGATCCTTTGGGTGCTGTTCCCAAGAAGCAGGAGGAGTCTCCACATGGCGCCGACAAAGATGGACCTGTGAAGGGTGCTATGAATGCTGAATCATCCACTGCATCTTTTGCAAGCAATATTGAGCAGGACGTGACTTCAAACAACCAGGAGTCAGAAGTGGACAATGTGTCCGGTAAGAACGACCAGGAAGATGATGAGGATAGTGATACTGAAGAGTTGGCAGAAGGCGATGAAGACGAGTCGGACCTGGATTTGGCATGGAAAATGCTTGATGTTGCTAGAGCCATTGTTGAAAAGCAATCTGTCCATACTATGGAACAAGTTGATATACTATCAACATTGGCAGATGTTGCTCTGGAAAGAGAGGATTTTGAAACATCTCTCTCTGACTACCAGAAGGCTCTATCCATCCTAGAACAGCTGGTTGAACCAGATGATAGAAACATTGCTGACATGTATCCTTGTCATGATTATTATTTTGATACAGCCTTAACTTGTGAAATAAGAAATTTCCGTATATGCTTGTGTTTGGAGGTTAGTTCAAAACCTGAGGAAGCCGTTGCTTATTTGGAGAAGGCTACATCTGTTTGTAAGGCACGCATAAATCGTCTCACAAATGAAGTGAAGAGTTTTTCAGACTCGACATCTTCCGAGACTAATAACTCAATTGCGGATAAACAAGCAGAAATTGAAACTCTCGCAGGTCTCTCAAGTGAACTGGAAAAGAAGCTTGAAGATCTACAACAGTTAATTGCAAACCCAAAATCAATTCTCGCTGAGATTCTAGCATCTGCCAAGGCAGGCAGTGGAAAGGAACCATCTCTAGCAAGAGTGAGCTCCTCACAGTTGGCTACAGAGAACAGCAGTGGAAGTTTTGACTCTCCAACCATTTCAACCGCTCACACCAATGGATCTGCTGGAGTCACACATCTTGGTGTAGTAGGGAGAGGAGTTAAGCGATCATCAAATGCCAGCGTGGCAGAAGCAAGCATTTCAAAAAAACCAGCATTAGAAACAACTGAAGAGAAAAGTGATGGTGGCAACGCATGA

Protein sequence

>Msa0715700

MVEETPTASETSVTMPQPTEPVTAVDGTLNHDKNGTTVNPAVESAATSAPASSSDGQKSLDMADELMEKGNKAMKENDFGEAADNYSRALEIRVAHYGELAPECVHTYYKYGCALLYKAQEEADPLGAVPKKQEESPHGADKDGPVKGAMNAESSTASFASNIEQDVTSNNQESEVDNVSGKNDQEDDEDSDTEELAEGDEDESDLDLAWKMLDVARAIVEKQSVHTMEQVDILSTLADVALEREDFETSLSDYQKALSILEQLVEPDDRNIADMYPCHDYYFDTALTCEIRNFRICLCLEVSSKPEEAVAYLEKATSVCKARINRLTNEVKSFSDSTSSETNNSIADKQAEIETLAGLSSELEKKLEDLQQLIANPKSILAEILASAKAGSGKEPSLARVSSSQLATENSSGSFDSPTISTAHTNGSAGVTHLGVVGRGVKRSSNASVAEASISKKPALETTEEKSDGGNA*