AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0945440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945440 MtrunA17_Chr4g0033821 96.643 715 18 3 1 709 1 715 0.0 1415
Msa0945440 MtrunA17_Chr4g0033811 98.491 464 7 0 706 1169 37 500 0.0 948
Msa0945440 MtrunA17_Chr3g0143841 22.449 196 147 3 767 958 555 749 2.16e-12 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945440 AT1G06720.2 60.959 1209 396 19 1 1169 1 1173 0.0 1328
Msa0945440 AT1G06720.1 60.050 1209 379 20 1 1169 1 1145 0.0 1301
Msa0945440 AT1G06720.3 58.503 935 321 17 1 895 1 908 0.0 981
Msa0945440 AT1G42440.1 23.629 237 161 5 768 999 556 777 5.49e-15 80.5

Find 274 sgRNAs with CRISPR-Local

Find 680 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTTCTCATCCCATTTC+TGG 0.104061 6_3:-24232557 None:intergenic
GATAGAAAAGTCACACTTTA+TGG 0.166733 6_3:+24229731 Msa0945440:CDS
CTATTCATGCATTATTATTA+TGG 0.172394 6_3:+24236567 Msa0945440:three_prime_UTR
GTTTGGGAGTGTTGAGGTTT+AGG 0.178090 6_3:-24227678 None:intergenic
AGCTTTGTGAAGTGCATTTC+TGG 0.182438 6_3:-24232628 None:intergenic
CATCCAACAGAAACAATAAT+TGG 0.191556 6_3:-24234716 None:intergenic
TAAAGAGAATCTTTGTTTAC+AGG 0.210381 6_3:-24235577 None:intergenic
TGCATTGCCTTGCTATGTTT+TGG 0.225796 6_3:+24234822 Msa0945440:CDS
TTTGGGAGTGTTGAGGTTTA+GGG 0.229615 6_3:-24227677 None:intergenic
GAAGAATAAGCAAAAGCTTT+AGG 0.235051 6_3:-24227863 None:intergenic
TGATCGAGTATTTGGTATTC+TGG 0.235507 6_3:-24231033 None:intergenic
TCCTTTCGTTATCGTTGTTC+AGG 0.238567 6_3:+24227982 Msa0945440:CDS
AAACCTGATACAATCGTAAT+TGG 0.241471 6_3:-24228188 None:intergenic
AACAGTTCTCATTCCTTTCC+AGG 0.256293 6_3:-24235521 None:intergenic
ATGCTCCCATGTCTGGGGTT+GGG 0.268927 6_3:+24230526 Msa0945440:CDS
TTCTCATTCCTTTCCAGGTC+TGG 0.269017 6_3:-24235516 None:intergenic
ATAGCTGGAGTGGGTGATTA+TGG 0.269741 6_3:+24230414 Msa0945440:CDS
GTCAATATAGTTACTTTCAT+TGG 0.272071 6_3:-24233685 None:intergenic
AAGAATAAGCAAAAGCTTTA+GGG 0.276080 6_3:-24227862 None:intergenic
ATCGTGCTTCTTCTTGGATT+TGG 0.278569 6_3:-24227807 None:intergenic
CGGGTAAACGGATAAATTTC+CGG 0.280099 6_3:+24227583 Msa0945440:five_prime_UTR
AACGACTCAAACACCGGTTT+TGG 0.282639 6_3:+24229374 Msa0945440:CDS
ATCGCCATCGTGCTTCTTCT+TGG 0.287530 6_3:-24227813 None:intergenic
TGCTCCCATGTCTGGGGTTG+GGG 0.289845 6_3:+24230527 Msa0945440:CDS
AGCATATGCCCAAGCGAAAA+AGG 0.290691 6_3:+24235810 Msa0945440:CDS
CCACTTACTTTCCATGAATA+AGG 0.290932 6_3:-24229438 None:intergenic
GGTCCAATTACGATTGTATC+AGG 0.292058 6_3:+24228185 Msa0945440:CDS
ACCAATGGATTGAACTTTCT+AGG 0.296955 6_3:-24235740 None:intergenic
TGTTGAGGTTTAGGGTTTAT+CGG 0.297644 6_3:-24227669 None:intergenic
GGGGTTCTTACTCATCTTGA+TGG 0.302331 6_3:+24229316 Msa0945440:CDS
CCATTTCTGGCTCATAAGTT+TGG 0.304849 6_3:-24232544 None:intergenic
CCCATTATTGATCGTAGTTA+TGG 0.308340 6_3:+24227950 Msa0945440:CDS
TATTATTATGGAAATCAAAT+AGG 0.310637 6_3:+24236579 Msa0945440:three_prime_UTR
ACCATAACTACGATCAATAA+TGG 0.311402 6_3:-24227951 None:intergenic
TCGAACAGTTAGTGGGATTA+GGG 0.311587 6_3:+24235217 Msa0945440:CDS
CATCATGAACCTCCAATCTT+AGG 0.315269 6_3:-24233899 None:intergenic
GTCAGAATTTCAACAAGTTT+TGG 0.318288 6_3:+24236479 Msa0945440:three_prime_UTR
TTTAGCTCCATCATATATTT+CGG 0.322236 6_3:-24229398 None:intergenic
TTATTTGCATGCACTTGTTC+AGG 0.325475 6_3:-24229701 None:intergenic
TACTAATAATTCGACCTCTA+TGG 0.334259 6_3:+24232161 Msa0945440:CDS
TGATCCCTACCATCCAATAT+TGG 0.339343 6_3:+24233947 Msa0945440:CDS
GACTTTGAAGATTTAGAAAC+AGG 0.339858 6_3:+24232690 Msa0945440:CDS
TACTTATCAGGCCTTATTCA+TGG 0.341070 6_3:+24229427 Msa0945440:CDS
TATGGTTTAGCTCATGTAAC+TGG 0.343189 6_3:+24230432 Msa0945440:CDS
CAAAGGAGAAAGGCAATCTT+TGG 0.349628 6_3:+24231298 Msa0945440:CDS
GAATCTTTGTTTACAGGTAT+AGG 0.353294 6_3:-24235571 None:intergenic
AGTATCTTGGCCATCATTCA+TGG 0.359132 6_3:+24236613 Msa0945440:three_prime_UTR
TTCGAACAGTTAGTGGGATT+AGG 0.371814 6_3:+24235216 Msa0945440:CDS
GGAAATTAGGTGCACATAGC+TGG 0.372007 6_3:+24230399 Msa0945440:intron
CTTCTTATAGACGGAAGTTA+TGG 0.372780 6_3:+24229104 Msa0945440:CDS
GACCCAATTATTGTTTCTGT+TGG 0.372854 6_3:+24234713 Msa0945440:CDS
TAATTGGGTCTCTAGTCTTC+AGG 0.377213 6_3:-24234700 None:intergenic
AAATTTGAAAATGTAGTGTT+TGG 0.377319 6_3:-24227700 None:intergenic
TACTCATCTTGATGGATTCA+AGG 0.378728 6_3:+24229324 Msa0945440:CDS
ATCATGCCATTGATATCATT+CGG 0.379358 6_3:-24229050 None:intergenic
CCTTTCCAGGTCTGGTCCCT+AGG 0.381198 6_3:-24235508 None:intergenic
GATAGTGAAGAAAATCAAAT+TGG 0.386203 6_3:+24235100 Msa0945440:CDS
AACAATAGAAAATAATTTCC+TGG 0.386870 6_3:-24236825 None:intergenic
AGTAGCGAGGATGAAGAAAA+TGG 0.390152 6_3:+24232198 Msa0945440:CDS
GAGGTAGAAGGCTTCCGAAC+AGG 0.392205 6_3:+24233870 Msa0945440:CDS
TCAATATAGTTACTTTCATT+GGG 0.392623 6_3:-24233684 None:intergenic
TATGCTCCCATGTCTGGGGT+TGG 0.393154 6_3:+24230525 Msa0945440:CDS
AGAGGAAGAGGAAGAGGAAG+AGG 0.394447 6_3:+24231753 Msa0945440:CDS
GGGTAAACGGATAAATTTCC+GGG 0.394970 6_3:+24227584 Msa0945440:five_prime_UTR
CCAAACTTATGAGCCAGAAA+TGG 0.394974 6_3:+24232544 Msa0945440:CDS
ATTCATATTAGACAGGTATA+AGG 0.395280 6_3:-24232854 None:intergenic
CCAAATTTCCGGACACAAAA+CGG 0.400183 6_3:-24232596 None:intergenic
GAGGAAGATGAAGATGTCTA+TGG 0.400758 6_3:+24232666 Msa0945440:CDS
TTTCGCTTGGGCATATGCTT+AGG 0.403172 6_3:-24235806 None:intergenic
TGAAGTTTCATCCTCTATCT+TGG 0.406214 6_3:+24229627 Msa0945440:CDS
CCTTTCGTTATCGTTGTTCA+GGG 0.406244 6_3:+24227983 Msa0945440:CDS
GGCTGTCGTTTGATGATAGA+AGG 0.413112 6_3:+24235831 Msa0945440:CDS
CAATTATTGTTTCTGTTGGA+TGG 0.415239 6_3:+24234717 Msa0945440:CDS
AGTTTGATGCAACTTGTGTA+TGG 0.417507 6_3:+24232132 Msa0945440:CDS
TTCAGAAGAGGAAGAGGAAG+AGG 0.419894 6_3:+24231747 Msa0945440:CDS
GAAAATGTAGTGTTTGGTTT+GGG 0.424616 6_3:-24227694 None:intergenic
CAGGAAAGGAAAGGGATGTA+GGG 0.424682 6_3:+24230990 Msa0945440:intron
CCTACCATCCAATATTGGTT+GGG 0.425632 6_3:+24233952 Msa0945440:CDS
GAAGCCTTCTACCTCTAATC+TGG 0.428774 6_3:-24233862 None:intergenic
GTTTCCATCATCATTTGTAA+TGG 0.431620 6_3:-24231239 None:intergenic
GTAATTGGACCACGAACTTC+AGG 0.432728 6_3:-24228173 None:intergenic
CCATAACTACGATCAATAAT+GGG 0.435279 6_3:-24227950 None:intergenic
ACAGGAAAGGAAAGGGATGT+AGG 0.435314 6_3:+24230989 Msa0945440:intron
TCATTGCCAGTATCTTCCTC+TGG 0.435494 6_3:-24233633 None:intergenic
TGAAAATGTAGTGTTTGGTT+TGG 0.435506 6_3:-24227695 None:intergenic
GCTCATAAGTTTGGCACACT+TGG 0.436298 6_3:-24232535 None:intergenic
AGATCCTCAATAGCATAAAC+TGG 0.440288 6_3:-24234758 None:intergenic
CTTGAAGTAGCTCGGTTTGA+AGG 0.441046 6_3:+24235185 Msa0945440:CDS
CATATATTTCGGTCCAAAAC+CGG 0.441783 6_3:-24229387 None:intergenic
TATTGAACTTGTCTTGTGTC+CGG 0.443879 6_3:-24236392 None:intergenic
GAAGGAAGAGGGCATGGATC+AGG 0.447359 6_3:-24230459 None:intergenic
TTCCCATCCCTATGTTCTTG+TGG 0.449284 6_3:+24229655 Msa0945440:CDS
TCAGTTAATGAAAGCTGAAA+AGG 0.450265 6_3:+24235913 Msa0945440:CDS
TAGCATAAACTGGTGTTGTC+TGG 0.456177 6_3:-24234748 None:intergenic
TCATGCCATTGATATCATTC+GGG 0.457643 6_3:-24229049 None:intergenic
GATACCAGATTAGAGGTAGA+AGG 0.458983 6_3:+24233858 Msa0945440:CDS
GCAAGGCAATGCATGTGTTC+TGG 0.459495 6_3:-24234812 None:intergenic
ATAGGATTCAGAAGAGGAAG+AGG 0.460642 6_3:+24231741 Msa0945440:intron
TGATGAGGATACCAGATTAG+AGG 0.460675 6_3:+24233851 Msa0945440:CDS
GTTGAGGTTTAGGGTTTATC+GGG 0.461280 6_3:-24227668 None:intergenic
GGAGCAAGCTTAAAGTATCT+TGG 0.464990 6_3:+24236600 Msa0945440:three_prime_UTR
CGTTGTTCAGGGTCCTCCCC+AGG 0.470724 6_3:+24227994 Msa0945440:CDS
CAAGAAAACAGCACTTATCA+AGG 0.472027 6_3:+24235145 Msa0945440:CDS
CCACCTATGTCGCTTTAACC+TGG 0.475946 6_3:-24234666 None:intergenic
AACACCAGTTTATGCTATTG+AGG 0.476344 6_3:+24234754 Msa0945440:CDS
ATCCAACAGAAACAATAATT+GGG 0.476676 6_3:-24234715 None:intergenic
AAGATTTGCCTGTAGTGACT+TGG 0.479282 6_3:-24235768 None:intergenic
TCAGACTTTATCCAACAATC+AGG 0.480881 6_3:+24234883 Msa0945440:CDS
ATCTTAGGTATGTCCCTGTT+CGG 0.481890 6_3:-24233884 None:intergenic
AGCTAATACTGAAGAGGAAG+AGG 0.484200 6_3:+24232647 Msa0945440:CDS
GGTCTAGGGGAGGAAAATGT+TGG 0.484771 6_3:+24233981 Msa0945440:CDS
CATCTGTCTTATAATTCTCA+TGG 0.484912 6_3:-24232719 None:intergenic
CATGGGTTCCCAAAGGTCAT+GGG 0.485283 6_3:+24229295 Msa0945440:CDS
CAAACTTATGAGCCAGAAAT+GGG 0.485737 6_3:+24232545 Msa0945440:CDS
AACAGGGACATACCTAAGAT+TGG 0.486630 6_3:+24233887 Msa0945440:CDS
GCAAAGGCGACTGCAGTTTG+TGG 0.486689 6_3:+24229022 Msa0945440:CDS
CCCTACCATCCAATATTGGT+TGG 0.487731 6_3:+24233951 Msa0945440:CDS
TCATGGGTTCCCAAAGGTCA+TGG 0.490364 6_3:+24229294 Msa0945440:CDS
TCATGATGTTCCCTGTGAAA+TGG 0.490845 6_3:+24233914 Msa0945440:CDS
ACCTAGAAAGTTCAATCCAT+TGG 0.491189 6_3:+24235739 Msa0945440:CDS
AAGTGCTAGATCAGCATACT+TGG 0.493596 6_3:-24229081 None:intergenic
CTTCTGATCTTGAAGTAGCT+CGG 0.496458 6_3:+24235177 Msa0945440:CDS
TGGGAAGTTCGCCAAGATAG+AGG 0.496623 6_3:-24229638 None:intergenic
CAAAACTTGCCTGAAGTTCG+TGG 0.497159 6_3:+24228164 Msa0945440:CDS
GGCACACTTGGAACAATCCT+CGG 0.497625 6_3:-24232523 None:intergenic
ATGGGTTCCCAAAGGTCATG+GGG 0.498872 6_3:+24229296 Msa0945440:CDS
ATCAGCATCGTTGACAGCCA+TGG 0.499681 6_3:-24227735 None:intergenic
AAAACGATCCACAAGAACAT+AGG 0.500879 6_3:-24229663 None:intergenic
AGAGAGAGCAAAGGAGGAGC+TGG 0.501527 6_3:+24236329 Msa0945440:CDS
ACGAGAGATGGACTGGATGA+TGG 0.501622 6_3:+24232489 Msa0945440:CDS
GTGAAGAAAATCAAATTGGT+TGG 0.503295 6_3:+24235104 Msa0945440:CDS
AGAGGAAGAGGAAGATGAAG+AGG 0.505144 6_3:+24231765 Msa0945440:CDS
AACAGCAACTATTCCAGTGT+TGG 0.506794 6_3:-24234861 None:intergenic
CTACCATCCAATATTGGTTG+GGG 0.508028 6_3:+24233953 Msa0945440:CDS
CACGATGGCGATGCCGATGA+TGG 0.508318 6_3:+24227824 Msa0945440:CDS
GAGACACCAGAGGAAGATAC+TGG 0.510268 6_3:+24233627 Msa0945440:intron
GGGTTGTTCACGATGGAACT+TGG 0.510287 6_3:-24233664 None:intergenic
ACAGCAACTATTCCAGTGTT+GGG 0.514456 6_3:-24234860 None:intergenic
ATGCTTCTGAATCATCTGAC+GGG 0.515624 6_3:+24231203 Msa0945440:CDS
TTGAATGAATGTGTGGATGA+TGG 0.516068 6_3:-24236518 None:intergenic
GTGTTTGACAGGAAAGGAAA+GGG 0.517376 6_3:+24230982 Msa0945440:intron
GCAGCTATTCGAACAGTTAG+TGG 0.517998 6_3:+24235209 Msa0945440:CDS
TGTGTTTGACAGGAAAGGAA+AGG 0.520274 6_3:+24230981 Msa0945440:intron
GGGAAATATTTCAAAGTGGA+AGG 0.520823 6_3:+24232071 Msa0945440:CDS
CGAAACAACGACTCAAACAC+CGG 0.521163 6_3:+24229368 Msa0945440:CDS
GATGCCATTACAAATGATGA+TGG 0.522389 6_3:+24231235 Msa0945440:CDS
CTCAACAACAACTGCAGTTG+CGG 0.522954 6_3:-24235060 None:intergenic
GGTGATTCCCAAGTCACTAC+AGG 0.523495 6_3:+24235760 Msa0945440:CDS
TTGCATAATCTGACCATCAT+CGG 0.524046 6_3:-24227837 None:intergenic
TTTCAGAGCTGCAATGGCGT+TGG 0.524457 6_3:-24227639 None:intergenic
AAACAAAGATTCTCTTTACA+AGG 0.525167 6_3:+24235582 Msa0945440:CDS
GGATAATAATGAAATCGATT+CGG 0.525840 6_3:+24231180 Msa0945440:CDS
TTAGTAACCTTTGCTCGTCA+TGG 0.526233 6_3:-24230634 None:intergenic
AAGATCCCCAACCCCAGACA+TGG 0.531653 6_3:-24230532 None:intergenic
AACTCTGCCATGACGAGCAA+AGG 0.531667 6_3:+24230627 Msa0945440:CDS
TGACAACAGCATTACAGCCT+AGG 0.532035 6_3:+24235491 Msa0945440:CDS
TCCACACATTCATTCAAAAG+AGG 0.532744 6_3:+24236524 Msa0945440:three_prime_UTR
AAAGTGCTCAACCATTTCAC+AGG 0.532879 6_3:-24233925 None:intergenic
TGTCTCGTCTTTCTTCTCTC+CGG 0.534473 6_3:-24236365 None:intergenic
AAGAAAGACGAGACAAATAC+CGG 0.536320 6_3:+24236373 Msa0945440:CDS
TTCAAAGTGGAAGGAGTCGT+TGG 0.536746 6_3:+24232080 Msa0945440:CDS
AAAACAAGCTCCATGAATGA+TGG 0.537502 6_3:-24236623 None:intergenic
GCTCACAGAACTCGTCAAGC+TGG 0.537860 6_3:+24227770 Msa0945440:CDS
TACAGCCTAGGGACCAGACC+TGG 0.538152 6_3:+24235503 Msa0945440:CDS
GATCAATAATGGGAAGATGA+AGG 0.538737 6_3:-24227940 None:intergenic
GGCTGTAATGCTGTTGTCAA+CGG 0.539125 6_3:-24235487 None:intergenic
TTTCAGCTTTCATTAACTGA+AGG 0.539422 6_3:-24235910 None:intergenic
GTTTGATGATAGAAGGCAAA+AGG 0.539424 6_3:+24235838 Msa0945440:CDS
AGATTTGCCTGTAGTGACTT+GGG 0.540542 6_3:-24235767 None:intergenic
TATGCTATTGAGGATCTCAA+TGG 0.540839 6_3:+24234764 Msa0945440:CDS
AGGCCAGGTTAAAGCGACAT+AGG 0.541597 6_3:+24234663 Msa0945440:intron
AATTAATATTCCTCGGGATG+AGG 0.541691 6_3:-24236771 None:intergenic
GTGTTGGCAGACCTGATTGT+TGG 0.541865 6_3:-24234894 None:intergenic
CAACTTGAGTCCATGCTCGC+AGG 0.542329 6_3:-24235444 None:intergenic
CTACAGCAATATACGAGAGA+TGG 0.543189 6_3:+24232477 Msa0945440:intron
CAGCTATTCGAACAGTTAGT+GGG 0.545097 6_3:+24235210 Msa0945440:CDS
AAAGGAAAGGGATGTAGGGG+TGG 0.551911 6_3:+24230994 Msa0945440:CDS
AAGGTTGCAAAAGAAGAGAT+AGG 0.552377 6_3:+24235331 Msa0945440:intron
TTCTAGTTTCAGAGCTGCAA+TGG 0.553564 6_3:-24227645 None:intergenic
AAACGATCCACAAGAACATA+GGG 0.555370 6_3:-24229662 None:intergenic
CCCAACCAATATTGGATGGT+AGG 0.555592 6_3:-24233952 None:intergenic
GCAATATACGAGAGATGGAC+TGG 0.557369 6_3:+24232482 Msa0945440:intron
CCTAGGGACCAGACCTGGAA+AGG 0.557506 6_3:+24235508 Msa0945440:CDS
TTTGTCTTCAAAAGTGCACC+TGG 0.557720 6_3:-24235398 None:intergenic
CAATGGAAGACAAAGGAGAA+AGG 0.557831 6_3:+24231288 Msa0945440:CDS
AGGTAGAAGGCTTCCGAACA+GGG 0.558628 6_3:+24233871 Msa0945440:CDS
TTCCTTGCAGAAGATGGCAT+GGG 0.560946 6_3:+24232051 Msa0945440:intron
GCAGCAGAAGGAAGAGGGCA+TGG 0.561573 6_3:-24230465 None:intergenic
TCACAAAGCTAATACTGAAG+AGG 0.561617 6_3:+24232641 Msa0945440:CDS
TTTCCTTGCAGAAGATGGCA+TGG 0.562662 6_3:+24232050 Msa0945440:intron
CTAGCACTTCTTCTTATAGA+CGG 0.563944 6_3:+24229095 Msa0945440:CDS
CCAACCAATATTGGATGGTA+GGG 0.564046 6_3:-24233951 None:intergenic
TGAAGCAGAGAGAGCAAAGG+AGG 0.566482 6_3:+24236323 Msa0945440:CDS
TGTTTGGTTTGGGAGTGTTG+AGG 0.566489 6_3:-24227684 None:intergenic
CCTCTTGCACCTCCCAACAC+TGG 0.569525 6_3:+24234848 Msa0945440:CDS
GATGCTTCTGAATCATCTGA+CGG 0.571809 6_3:+24231202 Msa0945440:CDS
TTGAGTTTAATCACGCTGCA+AGG 0.573961 6_3:+24235078 Msa0945440:CDS
GTTTGATGCAACTTGTGTAT+GGG 0.574954 6_3:+24232133 Msa0945440:CDS
GGGAGTTGATAAAGAAGCTG+AGG 0.575644 6_3:+24232767 Msa0945440:CDS
GGAAAATGTTGGATACATGC+AGG 0.576051 6_3:+24233992 Msa0945440:CDS
AAGGGTGGGCAAATCAAAGA+AGG 0.576253 6_3:+24235370 Msa0945440:CDS
GCATGGAAAAGTAGAAACTT+CGG 0.577267 6_3:+24231159 Msa0945440:CDS
AAATCAAAGAAGGAATTGCC+AGG 0.578516 6_3:+24235380 Msa0945440:CDS
TACACAAGTTGCATCAAACT+AGG 0.581851 6_3:-24232129 None:intergenic
ATCATTCTCTTCGTCCATAG+AGG 0.581921 6_3:-24232175 None:intergenic
AAAGTGGAAGGAGTCGTTGG+CGG 0.582605 6_3:+24232083 Msa0945440:CDS
GAGGGCCCCAAAACATAGCA+AGG 0.586240 6_3:-24234829 None:intergenic
TTTGCATGCACTTGTTCAGG+AGG 0.587833 6_3:-24229698 None:intergenic
CAAGTGTAAAATGTTTGACC+CGG 0.588158 6_3:-24227602 None:intergenic
AACTAGGAGATTTCCGTGCG+AGG 0.589678 6_3:-24232113 None:intergenic
AACACAATCCACACCTGGGG+AGG 0.595490 6_3:-24228007 None:intergenic
AGGAAAGGAAAGGGATGTAG+GGG 0.599307 6_3:+24230991 Msa0945440:intron
CCCTGAACAACGATAACGAA+AGG 0.602234 6_3:-24227983 None:intergenic
TTATTGTTTCTGTTGGATGG+AGG 0.602255 6_3:+24234720 Msa0945440:CDS
GAACAGATTGAGTTTCACAA+TGG 0.603272 6_3:+24231271 Msa0945440:CDS
AGGGACATACCTAAGATTGG+AGG 0.605833 6_3:+24233890 Msa0945440:CDS
GACAACAGCATTACAGCCTA+GGG 0.606939 6_3:+24235492 Msa0945440:CDS
AAAGCGGAAGCATAAGGAAG+GGG 0.607209 6_3:+24236284 Msa0945440:CDS
CCAGTGTTGGGAGGTGCAAG+AGG 0.608867 6_3:-24234848 None:intergenic
ATTTGCGATAATAACACAGA+AGG 0.610183 6_3:+24232746 Msa0945440:CDS
GCAAGTTCATGGGTTCCCAA+AGG 0.611594 6_3:+24229288 Msa0945440:CDS
TTAGGTGCACATAGCTGGAG+TGG 0.612744 6_3:+24230404 Msa0945440:intron
TTGATAAAGAAGCTGAGGAG+CGG 0.614382 6_3:+24232772 Msa0945440:CDS
AGTGACTTGGGAATCACCAA+TGG 0.615942 6_3:-24235755 None:intergenic
ATCCACAAGAACATAGGGAT+GGG 0.619925 6_3:-24229657 None:intergenic
GATCCACAAGAACATAGGGA+TGG 0.622882 6_3:-24229658 None:intergenic
ATAAAGAAGCTGAGGAGCGG+AGG 0.622920 6_3:+24232775 Msa0945440:CDS
CATTGATCATAGTGATCAGA+TGG 0.623214 6_3:+24231327 Msa0945440:CDS
CGAACAGTTAGTGGGATTAG+GGG 0.623966 6_3:+24235218 Msa0945440:CDS
TAGGTGCACATAGCTGGAGT+GGG 0.628376 6_3:+24230405 Msa0945440:intron
AAATGGGATGAGAAAGATCA+CGG 0.630236 6_3:+24232561 Msa0945440:CDS
CTATTGAGGATCTCAATGGA+AGG 0.631575 6_3:+24234768 Msa0945440:CDS
AATATTCCTCGGGATGAGGT+AGG 0.631744 6_3:-24236767 None:intergenic
TTTGCGATAATAACACAGAA+GGG 0.632576 6_3:+24232747 Msa0945440:CDS
TACCATCCAATATTGGTTGG+GGG 0.633210 6_3:+24233954 Msa0945440:CDS
CAGTGTTGGGAGGTGCAAGA+GGG 0.635098 6_3:-24234847 None:intergenic
TTTGATGCAACTTGTGTATG+GGG 0.635429 6_3:+24232134 Msa0945440:CDS
TTTCATTGGGTTGTTCACGA+TGG 0.635931 6_3:-24233671 None:intergenic
GAATGCCCGAATGATATCAA+TGG 0.636657 6_3:+24229044 Msa0945440:CDS
GAACAGTTAGTGGGATTAGG+GGG 0.637381 6_3:+24235219 Msa0945440:CDS
ACACTTTATGGCTATCTCAG+AGG 0.638793 6_3:+24229743 Msa0945440:CDS
AGATCCCCAACCCCAGACAT+GGG 0.639706 6_3:-24230531 None:intergenic
AAAAGCGGAAGCATAAGGAA+GGG 0.646298 6_3:+24236283 Msa0945440:CDS
AAACTCAAACCTATGCTCGA+CGG 0.647969 6_3:-24236422 None:intergenic
TGGGTTCCCAAAGGTCATGG+GGG 0.648510 6_3:+24229297 Msa0945440:CDS
AGTTTCACAATGGAAGACAA+AGG 0.652003 6_3:+24231281 Msa0945440:CDS
GCGACGCTGTTCTTTCTCGA+CGG 0.652773 6_3:-24227918 None:intergenic
ACTTGAAGCAGAGAGAGCAA+AGG 0.653193 6_3:+24236320 Msa0945440:CDS
TCATTGATAGGATTCAGAAG+AGG 0.653695 6_3:+24231735 Msa0945440:intron
TGCTTCTGAATCATCTGACG+GGG 0.654635 6_3:+24231204 Msa0945440:CDS
AACGAGGATGTAGAGCAGCA+TGG 0.656401 6_3:+24231142 Msa0945440:CDS
AAAGTGTCATCAGAAGCTCT+AGG 0.657938 6_3:+24231103 Msa0945440:CDS
GAAGGTGTTGAACAAGAGCG+TGG 0.658107 6_3:-24235892 None:intergenic
TGGCGGAAAGAATCCTCGCA+CGG 0.658585 6_3:+24232100 Msa0945440:CDS
GCATGGGAAATATTTCAAAG+TGG 0.664305 6_3:+24232067 Msa0945440:CDS
TGATGGAGTGGTCCACGCCG+AGG 0.665520 6_3:+24232506 Msa0945440:CDS
CGAAGAGAATGATAGTAGCG+AGG 0.665712 6_3:+24232185 Msa0945440:CDS
TTTCTTCCTACCTCATCCCG+AGG 0.666376 6_3:+24236761 Msa0945440:three_prime_UTR
TGAACAACGATAACGAAAGG+AGG 0.670102 6_3:-24227980 None:intergenic
AGATGGACTGGATGATGGAG+TGG 0.675807 6_3:+24232494 Msa0945440:CDS
CACTTGTCTCAGGAAAGCAA+AGG 0.680329 6_3:+24229006 Msa0945440:intron
TGAACTGAACGATCTTGATG+AGG 0.680605 6_3:+24233836 Msa0945440:CDS
ACTTGGAACAATCCTCGGCG+TGG 0.681288 6_3:-24232518 None:intergenic
GCAACTATTCCAGTGTTGGG+AGG 0.685453 6_3:-24234857 None:intergenic
CCAGGTTAAAGCGACATAGG+TGG 0.688054 6_3:+24234666 Msa0945440:CDS
AAGTGCTCAACCATTTCACA+GGG 0.695120 6_3:-24233924 None:intergenic
AAATCCAAGAAGAAGCACGA+TGG 0.700105 6_3:+24227809 Msa0945440:CDS
ACAACGATAACGAAAGGAGG+CGG 0.704266 6_3:-24227977 None:intergenic
TGAAAGTAACTATATTGACA+AGG 0.704301 6_3:+24233689 Msa0945440:CDS
GTCAACGGATTATAAAACTG+AGG 0.707234 6_3:-24235472 None:intergenic
TGATGACCCTGAGACACCAG+AGG 0.729413 6_3:+24233617 Msa0945440:intron
GAAGCTCTAGGTGATGCACA+AGG 0.732927 6_3:+24231115 Msa0945440:CDS
TGATGCACAAGGTACAAACG+AGG 0.769691 6_3:+24231126 Msa0945440:CDS
GAGGATGAAGATGACACACA+TGG 0.772317 6_3:+24231784 Msa0945440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACGTAAAAAAAATAAATTA+AGG - chr6_3:24230114-24230133 None:intergenic 10.0%
!!! AGAAATATTGTTTATTTTTT+TGG - chr6_3:24232890-24232909 None:intergenic 10.0%
!!! TAAAGTTTGTATTTTTGTAT+TGG + chr6_3:24228076-24228095 Msa0945440:intron 15.0%
!!! AAAGTTTGTATTTTTGTATT+GGG + chr6_3:24228077-24228096 Msa0945440:intron 15.0%
!!! ATAATTTGTTTATCCAAAAA+AGG - chr6_3:24228577-24228596 None:intergenic 15.0%
!!! TAAGTTATTTCTATAACATA+AGG + chr6_3:24228642-24228661 Msa0945440:intron 15.0%
!!! AATATTTGTTTTCTAATCTT+TGG + chr6_3:24229515-24229534 Msa0945440:intron 15.0%
!! AAGTATGTAGATTATATAAA+AGG + chr6_3:24230183-24230202 Msa0945440:intron 15.0%
!!! ACTGAATATATATTTTTTTG+GGG - chr6_3:24230361-24230380 None:intergenic 15.0%
!!! GACTGAATATATATTTTTTT+GGG - chr6_3:24230362-24230381 None:intergenic 15.0%
!!! AGACTGAATATATATTTTTT+TGG - chr6_3:24230363-24230382 None:intergenic 15.0%
!! TTAAAGAAAACAAATGAATA+GGG - chr6_3:24230945-24230964 None:intergenic 15.0%
!! ATTAAAGAAAACAAATGAAT+AGG - chr6_3:24230946-24230965 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGCATG+AGG + chr6_3:24231544-24231563 Msa0945440:intron 15.0%
!!! ATATTGTTTATTTTTTTGGA+GGG - chr6_3:24232886-24232905 None:intergenic 15.0%
!!! AATATTGTTTATTTTTTTGG+AGG - chr6_3:24232887-24232906 None:intergenic 15.0%
!! AACAAATAAATAACTTTGAT+TGG - chr6_3:24233157-24233176 None:intergenic 15.0%
!! TTTAATGCTATATAAATACA+TGG + chr6_3:24233187-24233206 Msa0945440:intron 15.0%
!! ATAATACCCAAAAAAATTAA+GGG - chr6_3:24233452-24233471 None:intergenic 15.0%
!!! TTAATTTTTTTGGGTATTAT+GGG + chr6_3:24233452-24233471 Msa0945440:intron 15.0%
!! TATATTAAAAACAAGTTGTT+AGG + chr6_3:24233546-24233565 Msa0945440:intron 15.0%
!! AAAGAAAGAAAACAAAAAAA+AGG - chr6_3:24234642-24234661 None:intergenic 15.0%
!!! AAATATCATTTTATTTCTAG+AGG - chr6_3:24236106-24236125 None:intergenic 15.0%
!! GAAATAAAATGATATTTCTT+AGG + chr6_3:24236109-24236128 Msa0945440:intron 15.0%
!! TATTATTATGGAAATCAAAT+AGG + chr6_3:24236579-24236598 Msa0945440:three_prime_UTR 15.0%
!! AAATTTGAAAATGTAGTGTT+TGG - chr6_3:24227703-24227722 None:intergenic 20.0%
!!! AACACTACATTTTCAAATTT+TGG + chr6_3:24227703-24227722 Msa0945440:five_prime_UTR 20.0%
!!! TATTTTTCTCTAGTAGATTT+GGG + chr6_3:24228266-24228285 Msa0945440:intron 20.0%
!! ATTAAATTGTTAATCCAAAC+AGG - chr6_3:24228724-24228743 None:intergenic 20.0%
!!! TTTAAGTTGAAAACAACTTA+TGG + chr6_3:24228778-24228797 Msa0945440:intron 20.0%
!! GAATGAAATATAAGCAAAAA+GGG - chr6_3:24228907-24228926 None:intergenic 20.0%
!!! TTTTTGCTTATATTTCATTC+CGG + chr6_3:24228907-24228926 Msa0945440:intron 20.0%
!! ATCTGGTATGAAAAATTAAT+TGG - chr6_3:24229209-24229228 None:intergenic 20.0%
!!! TTAATATTTTGCAAGTTCAT+GGG + chr6_3:24229278-24229297 Msa0945440:CDS 20.0%
!! TAATTTGAAAAAAGGCAATA+AGG + chr6_3:24229769-24229788 Msa0945440:CDS 20.0%
!! ATATAATCTACATACTTTGA+GGG - chr6_3:24230180-24230199 None:intergenic 20.0%
!! TATATAATCTACATACTTTG+AGG - chr6_3:24230181-24230200 None:intergenic 20.0%
!!! TTACTATTTTATCTCAATGT+TGG + chr6_3:24230234-24230253 Msa0945440:intron 20.0%
!!! CTGAATATATATTTTTTTGG+GGG - chr6_3:24230360-24230379 None:intergenic 20.0%
!! GAAATCATATTATGATCATA+TGG + chr6_3:24230763-24230782 Msa0945440:intron 20.0%
!! CATGAAAATGTAAATAGTAA+TGG - chr6_3:24230873-24230892 None:intergenic 20.0%
!!! TATCAATCTTTTTGATCAAA+AGG + chr6_3:24231078-24231097 Msa0945440:CDS 20.0%
!!! ATCAATCTTTTTGATCAAAA+GGG + chr6_3:24231079-24231098 Msa0945440:CDS 20.0%
!!! AATGAAACAAGTTTTTGTTA+TGG + chr6_3:24231406-24231425 Msa0945440:intron 20.0%
!! AAACAAATCTTAACAATCAA+AGG - chr6_3:24231823-24231842 None:intergenic 20.0%
!!! ATTTTTTGTCTGTTATTTTC+TGG + chr6_3:24231843-24231862 Msa0945440:intron 20.0%
!! AACCACTTATTAAAATTTGT+TGG + chr6_3:24232388-24232407 Msa0945440:intron 20.0%
!! AACACAAAGTTTCTTAATAA+TGG - chr6_3:24232439-24232458 None:intergenic 20.0%
!! TATATTGCTGTAGTTTAAAA+AGG - chr6_3:24232470-24232489 None:intergenic 20.0%
!!! TATTGTTTATTTTTTTGGAG+GGG - chr6_3:24232885-24232904 None:intergenic 20.0%
!! CATAATACCCAAAAAAATTA+AGG - chr6_3:24233453-24233472 None:intergenic 20.0%
!!! CTTAATTTTTTTGGGTATTA+TGG + chr6_3:24233451-24233470 Msa0945440:intron 20.0%
!!! CAATTGATATTGATAACAAT+TGG + chr6_3:24233490-24233509 Msa0945440:intron 20.0%
!!! TGAAACTACTTTTTTTATGA+CGG + chr6_3:24233517-24233536 Msa0945440:intron 20.0%
!!! TCATATGTGGATTAAAATTA+AGG - chr6_3:24233597-24233616 None:intergenic 20.0%
!!! TCAATATAGTTACTTTCATT+GGG - chr6_3:24233687-24233706 None:intergenic 20.0%
!!! TATTTTATGCAATATTCTCA+AGG + chr6_3:24234191-24234210 Msa0945440:intron 20.0%
!! AAAATGAGTATGTTTATGTT+AGG + chr6_3:24234243-24234262 Msa0945440:intron 20.0%
!! CATATTATTGATCAAACAAA+AGG - chr6_3:24234329-24234348 None:intergenic 20.0%
!! ATATATACCATCTATATGAA+AGG + chr6_3:24234438-24234457 Msa0945440:intron 20.0%
!! ACAGATGATATTAAAAGAAT+GGG - chr6_3:24234587-24234606 None:intergenic 20.0%
!! AACAGATGATATTAAAAGAA+TGG - chr6_3:24234588-24234607 None:intergenic 20.0%
!!! TTTTTTGTTTTCTTTCTTTC+AGG + chr6_3:24234643-24234662 Msa0945440:intron 20.0%
!!! TAAAAGGTGTATATGATTTT+AGG + chr6_3:24235022-24235041 Msa0945440:intron 20.0%
!!! TAAGTTATCTTTTAATCTGA+AGG + chr6_3:24235312-24235331 Msa0945440:intron 20.0%
!!! TTTCCTTTTTCTTTCTATTT+TGG + chr6_3:24235699-24235718 Msa0945440:intron 20.0%
!!! TATTTCTAGAGGAATATTAA+TGG - chr6_3:24236095-24236114 None:intergenic 20.0%
!! TCTAATTGTAGATAAAAAAG+CGG + chr6_3:24236268-24236287 Msa0945440:intron 20.0%
!! CTATTCATGCATTATTATTA+TGG + chr6_3:24236567-24236586 Msa0945440:three_prime_UTR 20.0%
!!! CTGATTTTTTTTGGAATTAT+AGG + chr6_3:24236659-24236678 Msa0945440:three_prime_UTR 20.0%
!! TCGAAAAAATTAATATTCCT+CGG - chr6_3:24236781-24236800 None:intergenic 20.0%
!! AACAATAGAAAATAATTTCC+TGG - chr6_3:24236828-24236847 None:intergenic 20.0%
! ACACGTGAAAAGAAAAATAT+CGG + chr6_3:24227563-24227582 Msa0945440:five_prime_UTR 25.0%
! AAAGAAAAATATCGGGTAAA+CGG + chr6_3:24227571-24227590 Msa0945440:five_prime_UTR 25.0%
!! AATTTTGGATTTCAAATCCA+TGG + chr6_3:24227718-24227737 Msa0945440:exon 25.0%
! AAGAATAAGCAAAAGCTTTA+GGG - chr6_3:24227865-24227884 None:intergenic 25.0%
!!! CTATTTTTCTCTAGTAGATT+TGG + chr6_3:24228265-24228284 Msa0945440:intron 25.0%
! ATTAAATTGTTTATCCAAGC+AGG - chr6_3:24228293-24228312 None:intergenic 25.0%
! GGAATGAAATATAAGCAAAA+AGG - chr6_3:24228908-24228927 None:intergenic 25.0%
!!! TACCAGATTCTTTGTTTTTA+AGG + chr6_3:24229221-24229240 Msa0945440:intron 25.0%
! ATCCTTAAAAACAAAGAATC+TGG - chr6_3:24229226-24229245 None:intergenic 25.0%
!! CTTAATATTTTGCAAGTTCA+TGG + chr6_3:24229277-24229296 Msa0945440:CDS 25.0%
!! TTTAGCTCCATCATATATTT+CGG - chr6_3:24229401-24229420 None:intergenic 25.0%
!!! GCTAAATTGTTTTACTTATC+AGG + chr6_3:24229415-24229434 Msa0945440:CDS 25.0%
! AGAGGTTGTAATTTGAAAAA+AGG + chr6_3:24229761-24229780 Msa0945440:CDS 25.0%
! TATTTATGCAATTAAGTGAC+GGG - chr6_3:24229992-24230011 None:intergenic 25.0%
! CTATTTATGCAATTAAGTGA+CGG - chr6_3:24229993-24230012 None:intergenic 25.0%
! AGAATTTCTTATCTCAATGT+TGG + chr6_3:24230259-24230278 Msa0945440:intron 25.0%
!!! ATATATATTTTTTTGGGGGT+GGG - chr6_3:24230356-24230375 None:intergenic 25.0%
!!! AATATATATTTTTTTGGGGG+TGG - chr6_3:24230357-24230376 None:intergenic 25.0%
!!! ATTCAGTCTGATTTGTATTT+TGG + chr6_3:24230374-24230393 Msa0945440:intron 25.0%
!!! TTGTATTTTGGATGGAAATT+AGG + chr6_3:24230386-24230405 Msa0945440:intron 25.0%
! ATCATATTATGATCATATGG+TGG + chr6_3:24230766-24230785 Msa0945440:intron 25.0%
! AAATGAATAGGGAAAAAAAC+AGG - chr6_3:24230934-24230953 None:intergenic 25.0%
!! TCAATCTTTTTGATCAAAAG+GGG + chr6_3:24231080-24231099 Msa0945440:CDS 25.0%
! GGATAATAATGAAATCGATT+CGG + chr6_3:24231180-24231199 Msa0945440:CDS 25.0%
! GAGATGTGTTACAAAAAATA+TGG + chr6_3:24231594-24231613 Msa0945440:intron 25.0%
! CTGCAAGGAAAATAAAAAAA+AGG - chr6_3:24232041-24232060 None:intergenic 25.0%
!!! AGCCAACAAATTTTAATAAG+TGG - chr6_3:24232393-24232412 None:intergenic 25.0%
! ATTCATATTAGACAGGTATA+AGG - chr6_3:24232857-24232876 None:intergenic 25.0%
! AAACAATATTTCTCAGAGTA+AGG + chr6_3:24232897-24232916 Msa0945440:intron 25.0%
! AACAATATTTCTCAGAGTAA+GGG + chr6_3:24232898-24232917 Msa0945440:intron 25.0%
! GAACAAATGAGAAGAATATT+TGG + chr6_3:24233027-24233046 Msa0945440:intron 25.0%
!! CTTTGATGTTTTCCAATAAA+AGG + chr6_3:24233102-24233121 Msa0945440:intron 25.0%
!! TATAAATACATGGTCTTGAT+TGG + chr6_3:24233197-24233216 Msa0945440:intron 25.0%
!! ATAAATACATGGTCTTGATT+GGG + chr6_3:24233198-24233217 Msa0945440:intron 25.0%
!!! TTCCTTCCCTTAATTTTTTT+GGG + chr6_3:24233443-24233462 Msa0945440:intron 25.0%
!! GTCAATATAGTTACTTTCAT+TGG - chr6_3:24233688-24233707 None:intergenic 25.0%
! TGAAAGTAACTATATTGACA+AGG + chr6_3:24233689-24233708 Msa0945440:CDS 25.0%
! ATAATTTGGAAATTGACATC+TGG - chr6_3:24233732-24233751 None:intergenic 25.0%
! AGATGTCAATTTCCAAATTA+TGG + chr6_3:24233731-24233750 Msa0945440:intron 25.0%
!! TCTTGTAATTTTCCAGTTAA+AGG + chr6_3:24233779-24233798 Msa0945440:intron 25.0%
! TACCAAAGGTTTCTATAATT+AGG + chr6_3:24234101-24234120 Msa0945440:intron 25.0%
! TAATTAGGAGCAATATCATA+AGG + chr6_3:24234116-24234135 Msa0945440:intron 25.0%
! AATTAGGAGCAATATCATAA+GGG + chr6_3:24234117-24234136 Msa0945440:intron 25.0%
! GAATATTGCATAAAATAACC+CGG - chr6_3:24234188-24234207 None:intergenic 25.0%
! TTTGATCAATAATATGTCCT+TGG + chr6_3:24234333-24234352 Msa0945440:intron 25.0%
! TAAAAGTAACACATGAATTG+TGG + chr6_3:24234412-24234431 Msa0945440:intron 25.0%
! AAAAGTAACACATGAATTGT+GGG + chr6_3:24234413-24234432 Msa0945440:intron 25.0%
! CAAAAAAAAGGTTCAAAAAC+AGG - chr6_3:24234630-24234649 None:intergenic 25.0%
! ATCCAACAGAAACAATAATT+GGG - chr6_3:24234718-24234737 None:intergenic 25.0%
!!! ATGCTATTTTTCCATTTCTA+TGG + chr6_3:24234968-24234987 Msa0945440:intron 25.0%
!! TATGATTTTAGGCAACTTTT+AGG + chr6_3:24235033-24235052 Msa0945440:intron 25.0%
! GATAGTGAAGAAAATCAAAT+TGG + chr6_3:24235100-24235119 Msa0945440:CDS 25.0%
!! TAAAGAGAATCTTTGTTTAC+AGG - chr6_3:24235580-24235599 None:intergenic 25.0%
! AAACAAAGATTCTCTTTACA+AGG + chr6_3:24235582-24235601 Msa0945440:CDS 25.0%
! TAGAGATAAATTTGTAAGAG+AGG - chr6_3:24235666-24235685 None:intergenic 25.0%
!!! TATTTTGGCAGAAAATTGAA+AGG + chr6_3:24235714-24235733 Msa0945440:intron 25.0%
!!! ATTTGATTTTTGTCATGTCA+AGG + chr6_3:24236455-24236474 Msa0945440:three_prime_UTR 25.0%
!!! TTTGATTTTTGTCATGTCAA+GGG + chr6_3:24236456-24236475 Msa0945440:three_prime_UTR 25.0%
! TAATTGACGTAGACAAAAAT+GGG - chr6_3:24236704-24236723 None:intergenic 25.0%
! ATAATTGACGTAGACAAAAA+TGG - chr6_3:24236705-24236724 None:intergenic 25.0%
! CGAAAAAATTAATATTCCTC+GGG - chr6_3:24236780-24236799 None:intergenic 25.0%
!!! TATGAGATTTTTTTTGCATG+TGG + chr6_3:24236802-24236821 Msa0945440:three_prime_UTR 25.0%
! TTCTTTTCACGTGTATACTT+TGG - chr6_3:24227557-24227576 None:intergenic 30.0%
CACGTGAAAAGAAAAATATC+GGG + chr6_3:24227564-24227583 Msa0945440:five_prime_UTR 30.0%
! TCAAACATTTTACACTTGCA+CGG + chr6_3:24227607-24227626 Msa0945440:five_prime_UTR 30.0%
! GAAAATGTAGTGTTTGGTTT+GGG - chr6_3:24227697-24227716 None:intergenic 30.0%
TGAAAATGTAGTGTTTGGTT+TGG - chr6_3:24227698-24227717 None:intergenic 30.0%
!!! TTGGATTTGGTTTTCTTCTT+GGG - chr6_3:24227797-24227816 None:intergenic 30.0%
GAAGAATAAGCAAAAGCTTT+AGG - chr6_3:24227866-24227885 None:intergenic 30.0%
CCATAACTACGATCAATAAT+GGG - chr6_3:24227953-24227972 None:intergenic 30.0%
ACCATAACTACGATCAATAA+TGG - chr6_3:24227954-24227973 None:intergenic 30.0%
!! ATTGGGTTTGATTGATTTTC+AGG + chr6_3:24228094-24228113 Msa0945440:intron 30.0%
AAACCTGATACAATCGTAAT+TGG - chr6_3:24228191-24228210 None:intergenic 30.0%
!! GCTGTTTTCATAAGCTATTT+TGG + chr6_3:24228416-24228435 Msa0945440:intron 30.0%
!!! ACTAAATTTGGGTCCTTTTT+TGG + chr6_3:24228561-24228580 Msa0945440:intron 30.0%
! CTTTTGCTTACATTTCATTC+CGG - chr6_3:24228820-24228839 None:intergenic 30.0%
GAATGAAATGTAAGCAAAAG+TGG + chr6_3:24228820-24228839 Msa0945440:intron 30.0%
! AGTTGAAAATTTGAGGTATG+TGG - chr6_3:24228883-24228902 None:intergenic 30.0%
AAAGGGTAGTTGAAAATTTG+AGG - chr6_3:24228890-24228909 None:intergenic 30.0%
GAACTCAGATTGGAATTATA+AGG + chr6_3:24228972-24228991 Msa0945440:intron 30.0%
ATCATGCCATTGATATCATT+CGG - chr6_3:24229053-24229072 None:intergenic 30.0%
GAGTTCTCGATTAAAATTAC+AGG + chr6_3:24229139-24229158 Msa0945440:intron 30.0%
AAATTACAGGCTTGTGAATA+TGG + chr6_3:24229152-24229171 Msa0945440:intron 30.0%
TAATTGGAAGCTAAGTAACA+CGG - chr6_3:24229193-24229212 None:intergenic 30.0%
!!! AAGGATTTTAATTTGCTTGC+AGG + chr6_3:24229240-24229259 Msa0945440:intron 30.0%
TCAAGGATGTTAAAAAGTTG+AGG + chr6_3:24229341-24229360 Msa0945440:CDS 30.0%
! TTTTGGACCGAAATATATGA+TGG + chr6_3:24229391-24229410 Msa0945440:CDS 30.0%
! TGTTTCTTCTTTTACACATG+CGG + chr6_3:24229489-24229508 Msa0945440:intron 30.0%
GATAGAAAAGTCACACTTTA+TGG + chr6_3:24229731-24229750 Msa0945440:CDS 30.0%
GTTGCGTTTATCTGATATTA+AGG + chr6_3:24229816-24229835 Msa0945440:intron 30.0%
! TCACTATAATCTAGAGCTTT+AGG + chr6_3:24229840-24229859 Msa0945440:intron 30.0%
AGAAGAAGAAAAATAAAGCG+TGG - chr6_3:24229956-24229975 None:intergenic 30.0%
TCTCTATTTATGCAACTAAC+GGG - chr6_3:24230056-24230075 None:intergenic 30.0%
CTCTCTATTTATGCAACTAA+CGG - chr6_3:24230057-24230076 None:intergenic 30.0%
!!! TATATATTTTTTTGGGGGTG+GGG - chr6_3:24230355-24230374 None:intergenic 30.0%
!! AGTCTGATTTGTATTTTGGA+TGG + chr6_3:24230378-24230397 Msa0945440:intron 30.0%
ATCATATCATGATCATACGA+TGG + chr6_3:24230699-24230718 Msa0945440:intron 30.0%
ATATTATGATCATATGGTGG+CGG + chr6_3:24230769-24230788 Msa0945440:intron 30.0%
GTAATGAGTGAAAAAATTCC+AGG - chr6_3:24230835-24230854 None:intergenic 30.0%
! TTTGTACTTTTGTGTTTGAC+AGG + chr6_3:24230971-24230990 Msa0945440:intron 30.0%
! CTTTTCATTGATCGAGTATT+TGG - chr6_3:24231044-24231063 None:intergenic 30.0%
GTTTCCATCATCATTTGTAA+TGG - chr6_3:24231242-24231261 None:intergenic 30.0%
! ACTCAATCTGTTCTTTTAAG+TGG - chr6_3:24231264-24231283 None:intergenic 30.0%
AATTGCCTTTCGATTCTTTA+GGG + chr6_3:24231430-24231449 Msa0945440:intron 30.0%
AAATTCCCTAAAGAATCGAA+AGG - chr6_3:24231438-24231457 None:intergenic 30.0%
TGTGTTACAAAAAATATGGC+AGG + chr6_3:24231598-24231617 Msa0945440:intron 30.0%
CAAATCTTAACAATCAAAGG+AGG - chr6_3:24231820-24231839 None:intergenic 30.0%
GTGATCTTAGCAACTAAAAT+GGG - chr6_3:24231978-24231997 None:intergenic 30.0%
TGTGATCTTAGCAACTAAAA+TGG - chr6_3:24231979-24231998 None:intergenic 30.0%
!! TTTATTTTCCTTGCAGAAGA+TGG + chr6_3:24232045-24232064 Msa0945440:intron 30.0%
TACTAATAATTCGACCTCTA+TGG + chr6_3:24232161-24232180 Msa0945440:CDS 30.0%
TAAGAGCAATTACATACAAG+TGG - chr6_3:24232289-24232308 None:intergenic 30.0%
! GACTTTGAAGATTTAGAAAC+AGG + chr6_3:24232690-24232709 Msa0945440:CDS 30.0%
CATCTGTCTTATAATTCTCA+TGG - chr6_3:24232722-24232741 None:intergenic 30.0%
ATTTGCGATAATAACACAGA+AGG + chr6_3:24232746-24232765 Msa0945440:CDS 30.0%
TTTGCGATAATAACACAGAA+GGG + chr6_3:24232747-24232766 Msa0945440:CDS 30.0%
ACAATATTTCTCAGAGTAAG+GGG + chr6_3:24232899-24232918 Msa0945440:intron 30.0%
! TTCTTTGGCCTATTGATTAA+AGG + chr6_3:24232932-24232951 Msa0945440:intron 30.0%
ACTCAGAACCTTTAATCAAT+AGG - chr6_3:24232943-24232962 None:intergenic 30.0%
!! TTGATTAAAGGTTCTGAGTA+TGG + chr6_3:24232944-24232963 Msa0945440:intron 30.0%
TTTGGTACAGCATAAGAAAA+TGG + chr6_3:24233045-24233064 Msa0945440:intron 30.0%
! TGATGTTTTCCAATAAAAGG+TGG + chr6_3:24233105-24233124 Msa0945440:intron 30.0%
! TTGTGTTAACCACCTTTTAT+TGG - chr6_3:24233117-24233136 None:intergenic 30.0%
TTTACCCATCAATAAAAGGT+GGG - chr6_3:24233247-24233266 None:intergenic 30.0%
CTTGTTTACCCATCAATAAA+AGG - chr6_3:24233251-24233270 None:intergenic 30.0%
CAAAAAAATTAAGGGAAGGA+AGG - chr6_3:24233444-24233463 None:intergenic 30.0%
!!! CTTCCTTCCCTTAATTTTTT+TGG + chr6_3:24233442-24233461 Msa0945440:intron 30.0%
TACCCAAAAAAATTAAGGGA+AGG - chr6_3:24233448-24233467 None:intergenic 30.0%
! TTGGTAGTCATTCCATAATT+TGG - chr6_3:24233746-24233765 None:intergenic 30.0%
ACAAGAGTTAGTTACTTAGT+TGG - chr6_3:24233765-24233784 None:intergenic 30.0%
! TGTAATTTTCCAGTTAAAGG+AGG + chr6_3:24233782-24233801 Msa0945440:intron 30.0%
CTCCTAATTATAGAAACCTT+TGG - chr6_3:24234106-24234125 None:intergenic 30.0%
!! TGTGTTGATTTCTAATCAAC+TGG + chr6_3:24234145-24234164 Msa0945440:intron 30.0%
! TTTATTCTTAGCAAGTATCG+TGG - chr6_3:24234225-24234244 None:intergenic 30.0%
AATTCCTAACAATACCATCA+AGG - chr6_3:24234280-24234299 None:intergenic 30.0%
!!! TTCATGTGTTACTTTTACGA+CGG - chr6_3:24234409-24234428 None:intergenic 30.0%
ATACCATCTATATGAAAGGA+TGG + chr6_3:24234442-24234461 Msa0945440:intron 30.0%
TTTCCATCCTTTCATATAGA+TGG - chr6_3:24234448-24234467 None:intergenic 30.0%
CATCCAACAGAAACAATAAT+TGG - chr6_3:24234719-24234738 None:intergenic 30.0%
!! CAATTATTGTTTCTGTTGGA+TGG + chr6_3:24234717-24234736 Msa0945440:CDS 30.0%
GTGAAGAAAATCAAATTGGT+TGG + chr6_3:24235104-24235123 Msa0945440:CDS 30.0%
! GTTTTCTTGAATATCTTGCA+CGG - chr6_3:24235134-24235153 None:intergenic 30.0%
! GAATCTTTGTTTACAGGTAT+AGG - chr6_3:24235574-24235593 None:intergenic 30.0%
CTGCCAAAATAGAAAGAAAA+AGG - chr6_3:24235705-24235724 None:intergenic 30.0%
!!! TGCTTAGGTTTTGATTCAAA+GGG - chr6_3:24235794-24235813 None:intergenic 30.0%
!!! ATGCTTAGGTTTTGATTCAA+AGG - chr6_3:24235795-24235814 None:intergenic 30.0%
TTTCAGCTTTCATTAACTGA+AGG - chr6_3:24235913-24235932 None:intergenic 30.0%
TCAGTTAATGAAAGCTGAAA+AGG + chr6_3:24235913-24235932 Msa0945440:CDS 30.0%
AACAAGCAGGTCTATAAAAA+GGG - chr6_3:24236008-24236027 None:intergenic 30.0%
!! TGACAAATTTTTCAACAAGC+AGG - chr6_3:24236021-24236040 None:intergenic 30.0%
! GCTTGTTGAAAAATTTGTCA+TGG + chr6_3:24236021-24236040 Msa0945440:intron 30.0%
ATTTCTACAAGCAAGACTTT+GGG + chr6_3:24236226-24236245 Msa0945440:intron 30.0%
! TTGATTTTTGTCATGTCAAG+GGG + chr6_3:24236457-24236476 Msa0945440:three_prime_UTR 30.0%
! GTCAGAATTTCAACAAGTTT+TGG + chr6_3:24236479-24236498 Msa0945440:three_prime_UTR 30.0%
!!! ATGATGGCACTGATTTTTTT+TGG + chr6_3:24236650-24236669 Msa0945440:three_prime_UTR 30.0%
!! GAACTTTAATTTTCTCACGA+TGG + chr6_3:24236880-24236899 Msa0945440:three_prime_UTR 30.0%
CAAGTGTAAAATGTTTGACC+CGG - chr6_3:24227605-24227624 None:intergenic 35.0%
! TGTTGAGGTTTAGGGTTTAT+CGG - chr6_3:24227672-24227691 None:intergenic 35.0%
!!! CTTGGATTTGGTTTTCTTCT+TGG - chr6_3:24227798-24227817 None:intergenic 35.0%
TTGCATAATCTGACCATCAT+CGG - chr6_3:24227840-24227859 None:intergenic 35.0%
! GATCAATAATGGGAAGATGA+AGG - chr6_3:24227943-24227962 None:intergenic 35.0%
CCCATTATTGATCGTAGTTA+TGG + chr6_3:24227950-24227969 Msa0945440:CDS 35.0%
AAAAAACACAATCCACACCT+GGG - chr6_3:24228014-24228033 None:intergenic 35.0%
AAAAAAACACAATCCACACC+TGG - chr6_3:24228015-24228034 None:intergenic 35.0%
!!! GGTTTGATTGATTTTCAGGT+TGG + chr6_3:24228098-24228117 Msa0945440:intron 35.0%
GTTTGTTTGAGCTTATCAAC+TGG - chr6_3:24228527-24228546 None:intergenic 35.0%
TCAAACAAACCAATCCTAAC+AGG + chr6_3:24228537-24228556 Msa0945440:intron 35.0%
AATTTAGTGCCTGTTAGGAT+TGG - chr6_3:24228549-24228568 None:intergenic 35.0%
ATCCTAACAGGCACTAAATT+TGG + chr6_3:24228549-24228568 Msa0945440:intron 35.0%
TCCTAACAGGCACTAAATTT+GGG + chr6_3:24228550-24228569 Msa0945440:intron 35.0%
TAGTAGATTTGAGTCCTGTT+TGG + chr6_3:24228707-24228726 Msa0945440:intron 35.0%
TGGATATATTGTACTCCATC+CGG + chr6_3:24228798-24228817 Msa0945440:intron 35.0%
TTGCTTATATTTCATTCCGG+AGG + chr6_3:24228910-24228929 Msa0945440:intron 35.0%
TGCTTATATTTCATTCCGGA+GGG + chr6_3:24228911-24228930 Msa0945440:intron 35.0%
! TCTGTGTACACGTTCTTTTA+TGG + chr6_3:24228945-24228964 Msa0945440:intron 35.0%
! TGTACACGTTCTTTTATGGT+TGG + chr6_3:24228949-24228968 Msa0945440:intron 35.0%
! GTACACGTTCTTTTATGGTT+GGG + chr6_3:24228950-24228969 Msa0945440:intron 35.0%
AATGTTTGATCACTTGTCTC+AGG + chr6_3:24228996-24229015 Msa0945440:intron 35.0%
TCATGCCATTGATATCATTC+GGG - chr6_3:24229052-24229071 None:intergenic 35.0%
CTAGCACTTCTTCTTATAGA+CGG + chr6_3:24229095-24229114 Msa0945440:CDS 35.0%
CTTCTTATAGACGGAAGTTA+TGG + chr6_3:24229104-24229123 Msa0945440:CDS 35.0%
!!! CGGAAGTTATGGTTTTGAAA+TGG + chr6_3:24229115-24229134 Msa0945440:CDS 35.0%
!! TACTCATCTTGATGGATTCA+AGG + chr6_3:24229324-24229343 Msa0945440:CDS 35.0%
CATATATTTCGGTCCAAAAC+CGG - chr6_3:24229390-24229409 None:intergenic 35.0%
!! TACTTATCAGGCCTTATTCA+TGG + chr6_3:24229427-24229446 Msa0945440:CDS 35.0%
CCACTTACTTTCCATGAATA+AGG - chr6_3:24229441-24229460 None:intergenic 35.0%
CCTTATTCATGGAAAGTAAG+TGG + chr6_3:24229438-24229457 Msa0945440:intron 35.0%
! GTTTCTTCTTTTACACATGC+GGG + chr6_3:24229490-24229509 Msa0945440:intron 35.0%
ATTGTCTTTCCTAACTGAAC+AGG + chr6_3:24229558-24229577 Msa0945440:intron 35.0%
TTTGACATACCTGTTCAGTT+AGG - chr6_3:24229570-24229589 None:intergenic 35.0%
TGAAGTTTCATCCTCTATCT+TGG + chr6_3:24229627-24229646 Msa0945440:CDS 35.0%
AAACGATCCACAAGAACATA+GGG - chr6_3:24229665-24229684 None:intergenic 35.0%
AAAACGATCCACAAGAACAT+AGG - chr6_3:24229666-24229685 None:intergenic 35.0%
TTATTTGCATGCACTTGTTC+AGG - chr6_3:24229704-24229723 None:intergenic 35.0%
!!! ATTGGTTTTCCTCCTTTAAC+AGG + chr6_3:24229923-24229942 Msa0945440:intron 35.0%
! TATGGTTTAGCTCATGTAAC+TGG + chr6_3:24230432-24230451 Msa0945440:CDS 35.0%
!! TTATTTTATGCTCCCATGTC+TGG + chr6_3:24230519-24230538 Msa0945440:CDS 35.0%
! TATTTTATGCTCCCATGTCT+GGG + chr6_3:24230520-24230539 Msa0945440:CDS 35.0%
! TCTTTTGTACGACAAAGATG+CGG + chr6_3:24230551-24230570 Msa0945440:CDS 35.0%
TCAGTTTCGCAAAGATAAAG+TGG - chr6_3:24230745-24230764 None:intergenic 35.0%
!! GTAATGGACTGTAACAAAGT+AGG - chr6_3:24230857-24230876 None:intergenic 35.0%
ATGCAAAACATATTTGCCAG+TGG - chr6_3:24230910-24230929 None:intergenic 35.0%
! ACTTTTGTGTTTGACAGGAA+AGG + chr6_3:24230976-24230995 Msa0945440:intron 35.0%
TGATCGAGTATTTGGTATTC+TGG - chr6_3:24231036-24231055 None:intergenic 35.0%
GCATGGAAAAGTAGAAACTT+CGG + chr6_3:24231159-24231178 Msa0945440:CDS 35.0%
GATGCCATTACAAATGATGA+TGG + chr6_3:24231235-24231254 Msa0945440:CDS 35.0%
GAACAGATTGAGTTTCACAA+TGG + chr6_3:24231271-24231290 Msa0945440:CDS 35.0%
AGTTTCACAATGGAAGACAA+AGG + chr6_3:24231281-24231300 Msa0945440:CDS 35.0%
CATTGATCATAGTGATCAGA+TGG + chr6_3:24231327-24231346 Msa0945440:CDS 35.0%
TTAAGGTTGTGTTTCCTGTA+TGG + chr6_3:24231356-24231375 Msa0945440:intron 35.0%
CAATGACAAAGTTTCCATAC+AGG - chr6_3:24231373-24231392 None:intergenic 35.0%
CAATTGCCTTTCGATTCTTT+AGG + chr6_3:24231429-24231448 Msa0945440:intron 35.0%
TGCAAACTGACATACACATA+GGG - chr6_3:24231671-24231690 None:intergenic 35.0%
ATGCAAACTGACATACACAT+AGG - chr6_3:24231672-24231691 None:intergenic 35.0%
! TCTAGACTGACTTCATTGAT+AGG + chr6_3:24231723-24231742 Msa0945440:intron 35.0%
TCATTGATAGGATTCAGAAG+AGG + chr6_3:24231735-24231754 Msa0945440:intron 35.0%
! GATCATTGATTAACAAGACC+TGG - chr6_3:24231902-24231921 None:intergenic 35.0%
AAGTGAGAAAACAGTATGTC+AGG - chr6_3:24231949-24231968 None:intergenic 35.0%
GCATGGGAAATATTTCAAAG+TGG + chr6_3:24232067-24232086 Msa0945440:CDS 35.0%
GGGAAATATTTCAAAGTGGA+AGG + chr6_3:24232071-24232090 Msa0945440:CDS 35.0%
TACACAAGTTGCATCAAACT+AGG - chr6_3:24232132-24232151 None:intergenic 35.0%
AGTTTGATGCAACTTGTGTA+TGG + chr6_3:24232132-24232151 Msa0945440:CDS 35.0%
GTTTGATGCAACTTGTGTAT+GGG + chr6_3:24232133-24232152 Msa0945440:CDS 35.0%
TTTGATGCAACTTGTGTATG+GGG + chr6_3:24232134-24232153 Msa0945440:CDS 35.0%
CAAACTTATGAGCCAGAAAT+GGG + chr6_3:24232545-24232564 Msa0945440:CDS 35.0%
AAATGGGATGAGAAAGATCA+CGG + chr6_3:24232561-24232580 Msa0945440:CDS 35.0%
TCACAAAGCTAATACTGAAG+AGG + chr6_3:24232641-24232660 Msa0945440:CDS 35.0%
GGTATAAGGAGAGCTAAAAA+AGG - chr6_3:24232843-24232862 None:intergenic 35.0%
CAATATTTCTCAGAGTAAGG+GGG + chr6_3:24232900-24232919 Msa0945440:intron 35.0%
CTCAATCTTTGGATGACAAA+AGG - chr6_3:24232995-24233014 None:intergenic 35.0%
! TAACACTATCCAAGTTGAGT+TGG - chr6_3:24233224-24233243 None:intergenic 35.0%
! TGTTACCCACCTTTTATTGA+TGG + chr6_3:24233239-24233258 Msa0945440:intron 35.0%
! GTTACCCACCTTTTATTGAT+GGG + chr6_3:24233240-24233259 Msa0945440:intron 35.0%
GTTTACCCATCAATAAAAGG+TGG - chr6_3:24233248-24233267 None:intergenic 35.0%
ATAACACACAGCATCAGAAA+GGG - chr6_3:24233279-24233298 None:intergenic 35.0%
TATAACACACAGCATCAGAA+AGG - chr6_3:24233280-24233299 None:intergenic 35.0%
!!! GGTTTTTAGCCACATTTACT+TGG + chr6_3:24233362-24233381 Msa0945440:intron 35.0%
ACAAGTTGTTAGGACTGAAA+TGG + chr6_3:24233556-24233575 Msa0945440:intron 35.0%
! TGTGTTAGTCTAGAAACATC+TGG + chr6_3:24234077-24234096 Msa0945440:intron 35.0%
TAGAAACATCTGGATACCAA+AGG + chr6_3:24234087-24234106 Msa0945440:intron 35.0%
TGATTTCTAATCAACTGGTC+TGG + chr6_3:24234150-24234169 Msa0945440:intron 35.0%
! GATTTCTAATCAACTGGTCT+GGG + chr6_3:24234151-24234170 Msa0945440:intron 35.0%
!! AACTGGTCTGGGTTTTTAAT+TGG + chr6_3:24234162-24234181 Msa0945440:intron 35.0%
! AAAAACAGGAAGAGCATAGA+GGG - chr6_3:24234616-24234635 None:intergenic 35.0%
!! GACCCAATTATTGTTTCTGT+TGG + chr6_3:24234713-24234732 Msa0945440:CDS 35.0%
!! TTATTGTTTCTGTTGGATGG+AGG + chr6_3:24234720-24234739 Msa0945440:CDS 35.0%
AACACCAGTTTATGCTATTG+AGG + chr6_3:24234754-24234773 Msa0945440:CDS 35.0%
AGATCCTCAATAGCATAAAC+TGG - chr6_3:24234761-24234780 None:intergenic 35.0%
TATGCTATTGAGGATCTCAA+TGG + chr6_3:24234764-24234783 Msa0945440:CDS 35.0%
TCAGACTTTATCCAACAATC+AGG + chr6_3:24234883-24234902 Msa0945440:CDS 35.0%
TTAACATGCAAAGGATGTGT+TGG - chr6_3:24234913-24234932 None:intergenic 35.0%
CACATCCTTTGCATGTTAAA+TGG + chr6_3:24234914-24234933 Msa0945440:intron 35.0%
AGAAGCCATTTAACATGCAA+AGG - chr6_3:24234922-24234941 None:intergenic 35.0%
CATTGAGAGGATCTGTAAAT+AGG - chr6_3:24234945-24234964 None:intergenic 35.0%
ATTTACAGATCCTCTCAATG+TGG + chr6_3:24234945-24234964 Msa0945440:intron 35.0%
AAAATAGCATCCACATTGAG+AGG - chr6_3:24234958-24234977 None:intergenic 35.0%
AGGGAACAAAACCATAGAAA+TGG - chr6_3:24234982-24235001 None:intergenic 35.0%
TCACTGGCAAAACTATAACA+GGG - chr6_3:24235001-24235020 None:intergenic 35.0%
!! TAGTTTTGCCAGTGACTAAA+AGG + chr6_3:24235006-24235025 Msa0945440:intron 35.0%
! CATATACACCTTTTAGTCAC+TGG - chr6_3:24235017-24235036 None:intergenic 35.0%
CAAGAAAACAGCACTTATCA+AGG + chr6_3:24235145-24235164 Msa0945440:CDS 35.0%
AAGGTTGCAAAAGAAGAGAT+AGG + chr6_3:24235331-24235350 Msa0945440:intron 35.0%
AAATCAAAGAAGGAATTGCC+AGG + chr6_3:24235380-24235399 Msa0945440:CDS 35.0%
!! GTCAACGGATTATAAAACTG+AGG - chr6_3:24235475-24235494 None:intergenic 35.0%
TCTCTTTACAAGGTATGTTC+TGG + chr6_3:24235592-24235611 Msa0945440:intron 35.0%
GTCAGAAAGCGGAAAATAAA+CGG - chr6_3:24235625-24235644 None:intergenic 35.0%
ACCTAGAAAGTTCAATCCAT+TGG + chr6_3:24235739-24235758 Msa0945440:CDS 35.0%
!! ACCAATGGATTGAACTTTCT+AGG - chr6_3:24235743-24235762 None:intergenic 35.0%
! GTTTGATGATAGAAGGCAAA+AGG + chr6_3:24235838-24235857 Msa0945440:CDS 35.0%
TCAATTCAACCACCAATACA+TGG - chr6_3:24235972-24235991 None:intergenic 35.0%
CAACAAGCAGGTCTATAAAA+AGG - chr6_3:24236009-24236028 None:intergenic 35.0%
TCTAGAGGAATATTAATGGC+AGG - chr6_3:24236091-24236110 None:intergenic 35.0%
! TTTCCCGTATATTTCTGTAG+CGG + chr6_3:24236165-24236184 Msa0945440:intron 35.0%
TTACCGCTACAGAAATATAC+GGG - chr6_3:24236171-24236190 None:intergenic 35.0%
GTTACCGCTACAGAAATATA+CGG - chr6_3:24236172-24236191 None:intergenic 35.0%
CATTTCTACAAGCAAGACTT+TGG + chr6_3:24236225-24236244 Msa0945440:intron 35.0%
! GATAAAAAAGCGGAAGCATA+AGG + chr6_3:24236278-24236297 Msa0945440:intron 35.0%
AAGAAAGACGAGACAAATAC+CGG + chr6_3:24236373-24236392 Msa0945440:CDS 35.0%
TATTGAACTTGTCTTGTGTC+CGG - chr6_3:24236395-24236414 None:intergenic 35.0%
TAAAAAAATCCGTCGAGCAT+AGG + chr6_3:24236413-24236432 Msa0945440:CDS 35.0%
!! AAGTTTTGGTGACATGCAAA+TGG + chr6_3:24236493-24236512 Msa0945440:three_prime_UTR 35.0%
TTGAATGAATGTGTGGATGA+TGG - chr6_3:24236521-24236540 None:intergenic 35.0%
TCCACACATTCATTCAAAAG+AGG + chr6_3:24236524-24236543 Msa0945440:three_prime_UTR 35.0%
! TCCTCTTTTGAATGAATGTG+TGG - chr6_3:24236528-24236547 None:intergenic 35.0%
AAAACAAGCTCCATGAATGA+TGG - chr6_3:24236626-24236645 None:intergenic 35.0%
!!! GGAGCTTGTTTTTGAAATGA+TGG + chr6_3:24236634-24236653 Msa0945440:three_prime_UTR 35.0%
AATTAATATTCCTCGGGATG+AGG - chr6_3:24236774-24236793 None:intergenic 35.0%
CGGGTAAACGGATAAATTTC+CGG + chr6_3:24227583-24227602 Msa0945440:five_prime_UTR 40.0%
GGGTAAACGGATAAATTTCC+GGG + chr6_3:24227584-24227603 Msa0945440:five_prime_UTR 40.0%
!! TTCTAGTTTCAGAGCTGCAA+TGG - chr6_3:24227648-24227667 None:intergenic 40.0%
! GTTGAGGTTTAGGGTTTATC+GGG - chr6_3:24227671-24227690 None:intergenic 40.0%
!! TTTGGGAGTGTTGAGGTTTA+GGG - chr6_3:24227680-24227699 None:intergenic 40.0%
ATCGTGCTTCTTCTTGGATT+TGG - chr6_3:24227810-24227829 None:intergenic 40.0%
! AAATCCAAGAAGAAGCACGA+TGG + chr6_3:24227809-24227828 Msa0945440:CDS 40.0%
TGAACAACGATAACGAAAGG+AGG - chr6_3:24227983-24228002 None:intergenic 40.0%
TCCTTTCGTTATCGTTGTTC+AGG + chr6_3:24227982-24228001 Msa0945440:CDS 40.0%
CCTTTCGTTATCGTTGTTCA+GGG + chr6_3:24227983-24228002 Msa0945440:CDS 40.0%
AAAAACACAATCCACACCTG+GGG - chr6_3:24228013-24228032 None:intergenic 40.0%
GGTCCAATTACGATTGTATC+AGG + chr6_3:24228185-24228204 Msa0945440:CDS 40.0%
CTTATGCATAAGCACTTACG+TGG - chr6_3:24228341-24228360 None:intergenic 40.0%
ACCCAAATTTAGTGCCTGTT+AGG - chr6_3:24228554-24228573 None:intergenic 40.0%
TGCTTACATTTCATTCCGGA+TGG - chr6_3:24228816-24228835 None:intergenic 40.0%
AGTTGAAATGTCAACGCATG+TGG + chr6_3:24228844-24228863 Msa0945440:intron 40.0%
TTATGGTTGGGAACTCAGAT+TGG + chr6_3:24228962-24228981 Msa0945440:intron 40.0%
GAATGCCCGAATGATATCAA+TGG + chr6_3:24229044-24229063 Msa0945440:CDS 40.0%
AAGTGCTAGATCAGCATACT+TGG - chr6_3:24229084-24229103 None:intergenic 40.0%
ATCCACAAGAACATAGGGAT+GGG - chr6_3:24229660-24229679 None:intergenic 40.0%
ACACTTTATGGCTATCTCAG+AGG + chr6_3:24229743-24229762 Msa0945440:CDS 40.0%
CGATCGCATGTATCATTTGA+GGG - chr6_3:24229883-24229902 None:intergenic 40.0%
CCTCAAATGATACATGCGAT+CGG + chr6_3:24229881-24229900 Msa0945440:intron 40.0%
! TTGAGCAACAAGTTGGAGAT+TGG + chr6_3:24229905-24229924 Msa0945440:intron 40.0%
! GGATTTGTTCCTGTTAAAGG+AGG - chr6_3:24229935-24229954 None:intergenic 40.0%
! CGTGGATTTGTTCCTGTTAA+AGG - chr6_3:24229938-24229957 None:intergenic 40.0%
TCTAGTAGATAGTAACCCCT+CGG + chr6_3:24230139-24230158 Msa0945440:intron 40.0%
! TTCTTGGATATTTTCCCGAG+GGG - chr6_3:24230157-24230176 None:intergenic 40.0%
! GTTCTTGGATATTTTCCCGA+GGG - chr6_3:24230158-24230177 None:intergenic 40.0%
! CTACATACTTTGAGGGTTCT+TGG - chr6_3:24230173-24230192 None:intergenic 40.0%
TGACCATCTGTTGAGTGATA+TGG + chr6_3:24230303-24230322 Msa0945440:intron 40.0%
TCACCATATCACTCAACAGA+TGG - chr6_3:24230309-24230328 None:intergenic 40.0%
! ATTTTATGCTCCCATGTCTG+GGG + chr6_3:24230521-24230540 Msa0945440:CDS 40.0%
TTAGTAACCTTTGCTCGTCA+TGG - chr6_3:24230637-24230656 None:intergenic 40.0%
CGCAAAGATAAAGTGGATGA+AGG - chr6_3:24230738-24230757 None:intergenic 40.0%
!! ATTCTTGCATTTTGCTGTCC+TGG + chr6_3:24230814-24230833 Msa0945440:intron 40.0%
TGTGTTTGACAGGAAAGGAA+AGG + chr6_3:24230981-24231000 Msa0945440:intron 40.0%
GTGTTTGACAGGAAAGGAAA+GGG + chr6_3:24230982-24231001 Msa0945440:intron 40.0%
! AAAGTGTCATCAGAAGCTCT+AGG + chr6_3:24231103-24231122 Msa0945440:CDS 40.0%
GATGCTTCTGAATCATCTGA+CGG + chr6_3:24231202-24231221 Msa0945440:CDS 40.0%
ATGCTTCTGAATCATCTGAC+GGG + chr6_3:24231203-24231222 Msa0945440:CDS 40.0%
CAATGGAAGACAAAGGAGAA+AGG + chr6_3:24231288-24231307 Msa0945440:CDS 40.0%
CAAAGGAGAAAGGCAATCTT+TGG + chr6_3:24231298-24231317 Msa0945440:CDS 40.0%
TGATCAGATGGTGAGTCTTA+AGG + chr6_3:24231339-24231358 Msa0945440:intron 40.0%
TACAAAAAATATGGCAGGCC+AGG + chr6_3:24231603-24231622 Msa0945440:intron 40.0%
ATACACATAGGGATGGGAAT+AGG - chr6_3:24231660-24231679 None:intergenic 40.0%
ACTGACATACACATAGGGAT+GGG - chr6_3:24231666-24231685 None:intergenic 40.0%
AACTGACATACACATAGGGA+TGG - chr6_3:24231667-24231686 None:intergenic 40.0%
AGTTTGCATTGAGAATGCTC+TGG + chr6_3:24231683-24231702 Msa0945440:intron 40.0%
ATAGGATTCAGAAGAGGAAG+AGG + chr6_3:24231741-24231760 Msa0945440:intron 40.0%
ATCATTCTCTTCGTCCATAG+AGG - chr6_3:24232178-24232197 None:intergenic 40.0%
AGTAGCGAGGATGAAGAAAA+TGG + chr6_3:24232198-24232217 Msa0945440:CDS 40.0%
CAAGTGGTGCAAGTTAGTAA+AGG - chr6_3:24232273-24232292 None:intergenic 40.0%
CTACAGCAATATACGAGAGA+TGG + chr6_3:24232477-24232496 Msa0945440:intron 40.0%
!! CCATTTCTGGCTCATAAGTT+TGG - chr6_3:24232547-24232566 None:intergenic 40.0%
CCAAACTTATGAGCCAGAAA+TGG + chr6_3:24232544-24232563 Msa0945440:CDS 40.0%
GATCTTTCTCATCCCATTTC+TGG - chr6_3:24232560-24232579 None:intergenic 40.0%
CCAAATTTCCGGACACAAAA+CGG - chr6_3:24232599-24232618 None:intergenic 40.0%
! AGCTTTGTGAAGTGCATTTC+TGG - chr6_3:24232631-24232650 None:intergenic 40.0%
AGCTAATACTGAAGAGGAAG+AGG + chr6_3:24232647-24232666 Msa0945440:CDS 40.0%
GAGGAAGATGAAGATGTCTA+TGG + chr6_3:24232666-24232685 Msa0945440:CDS 40.0%
TTGATAAAGAAGCTGAGGAG+CGG + chr6_3:24232772-24232791 Msa0945440:CDS 40.0%
GGCAGTCATTCATATTAGAC+AGG - chr6_3:24232864-24232883 None:intergenic 40.0%
TTCTCATTTGTTCGAAGCAG+GGG - chr6_3:24233020-24233039 None:intergenic 40.0%
CTTCTCATTTGTTCGAAGCA+GGG - chr6_3:24233021-24233040 None:intergenic 40.0%
TCTTCTCATTTGTTCGAAGC+AGG - chr6_3:24233022-24233041 None:intergenic 40.0%
TAACACAACCCATGCTAAGT+TGG + chr6_3:24233129-24233148 Msa0945440:intron 40.0%
GTGTGTTATACCTATGACCT+AGG + chr6_3:24233290-24233309 Msa0945440:intron 40.0%
GGCTAAAAACCTTTGAGCTT+TGG - chr6_3:24233353-24233372 None:intergenic 40.0%
GCTTATGCACCAAGTAAATG+TGG - chr6_3:24233374-24233393 None:intergenic 40.0%
TAAGCCATTAGCTAACTCAG+CGG + chr6_3:24233389-24233408 Msa0945440:intron 40.0%
! TTTCATTGGGTTGTTCACGA+TGG - chr6_3:24233674-24233693 None:intergenic 40.0%
TGAACTGAACGATCTTGATG+AGG + chr6_3:24233836-24233855 Msa0945440:CDS 40.0%
TGATGAGGATACCAGATTAG+AGG + chr6_3:24233851-24233870 Msa0945440:CDS 40.0%
GATACCAGATTAGAGGTAGA+AGG + chr6_3:24233858-24233877 Msa0945440:CDS 40.0%
ATCTTAGGTATGTCCCTGTT+CGG - chr6_3:24233887-24233906 None:intergenic 40.0%
AACAGGGACATACCTAAGAT+TGG + chr6_3:24233887-24233906 Msa0945440:CDS 40.0%
CATCATGAACCTCCAATCTT+AGG - chr6_3:24233902-24233921 None:intergenic 40.0%
TCATGATGTTCCCTGTGAAA+TGG + chr6_3:24233914-24233933 Msa0945440:CDS 40.0%
AAGTGCTCAACCATTTCACA+GGG - chr6_3:24233927-24233946 None:intergenic 40.0%
! AAAGTGCTCAACCATTTCAC+AGG - chr6_3:24233928-24233947 None:intergenic 40.0%
TGATCCCTACCATCCAATAT+TGG + chr6_3:24233947-24233966 Msa0945440:CDS 40.0%
CCAACCAATATTGGATGGTA+GGG - chr6_3:24233954-24233973 None:intergenic 40.0%
! CCTACCATCCAATATTGGTT+GGG + chr6_3:24233952-24233971 Msa0945440:CDS 40.0%
! CTACCATCCAATATTGGTTG+GGG + chr6_3:24233953-24233972 Msa0945440:CDS 40.0%
! TACCATCCAATATTGGTTGG+GGG + chr6_3:24233954-24233973 Msa0945440:CDS 40.0%
GGAAAATGTTGGATACATGC+AGG + chr6_3:24233992-24234011 Msa0945440:CDS 40.0%
! CACTCCTTGATGGTATTGTT+AGG + chr6_3:24234273-24234292 Msa0945440:intron 40.0%
TTCTTTCGTTGTTGCAGACA+CGG + chr6_3:24234299-24234318 Msa0945440:intron 40.0%
! TGTCCTTGGTGTATTGCATT+TGG + chr6_3:24234347-24234366 Msa0945440:intron 40.0%
! AAAACAGGAAGAGCATAGAG+GGG - chr6_3:24234615-24234634 None:intergenic 40.0%
! CAAAAACAGGAAGAGCATAG+AGG - chr6_3:24234617-24234636 None:intergenic 40.0%
! TGTTTTCTTTCTTTCAGGCC+AGG + chr6_3:24234648-24234667 Msa0945440:intron 40.0%
! TAATTGGGTCTCTAGTCTTC+AGG - chr6_3:24234703-24234722 None:intergenic 40.0%
!! TAGCATAAACTGGTGTTGTC+TGG - chr6_3:24234751-24234770 None:intergenic 40.0%
CTATTGAGGATCTCAATGGA+AGG + chr6_3:24234768-24234787 Msa0945440:CDS 40.0%
!! TGCATTGCCTTGCTATGTTT+TGG + chr6_3:24234822-24234841 Msa0945440:CDS 40.0%
!! GCATTGCCTTGCTATGTTTT+GGG + chr6_3:24234823-24234842 Msa0945440:CDS 40.0%
!! CATTGCCTTGCTATGTTTTG+GGG + chr6_3:24234824-24234843 Msa0945440:CDS 40.0%
ACAGCAACTATTCCAGTGTT+GGG - chr6_3:24234863-24234882 None:intergenic 40.0%
AACAGCAACTATTCCAGTGT+TGG - chr6_3:24234864-24234883 None:intergenic 40.0%
GTCACTGGCAAAACTATAAC+AGG - chr6_3:24235002-24235021 None:intergenic 40.0%
TTGAGTTTAATCACGCTGCA+AGG + chr6_3:24235078-24235097 Msa0945440:CDS 40.0%
CTTCTGATCTTGAAGTAGCT+CGG + chr6_3:24235177-24235196 Msa0945440:CDS 40.0%
CAGCTATTCGAACAGTTAGT+GGG + chr6_3:24235210-24235229 Msa0945440:CDS 40.0%
TTCGAACAGTTAGTGGGATT+AGG + chr6_3:24235216-24235235 Msa0945440:CDS 40.0%
TCGAACAGTTAGTGGGATTA+GGG + chr6_3:24235217-24235236 Msa0945440:CDS 40.0%
AGGTAACCAGCCAAAAAAGA+AGG + chr6_3:24235351-24235370 Msa0945440:CDS 40.0%
GGTAACCAGCCAAAAAAGAA+GGG + chr6_3:24235352-24235371 Msa0945440:CDS 40.0%
!!! ATTTGCCCACCCTTCTTTTT+TGG - chr6_3:24235364-24235383 None:intergenic 40.0%
! TTTGTCTTCAAAAGTGCACC+TGG - chr6_3:24235401-24235420 None:intergenic 40.0%
AACAGTTCTCATTCCTTTCC+AGG - chr6_3:24235524-24235543 None:intergenic 40.0%
TCTTGAAATGCGTCAGAAAG+CGG - chr6_3:24235636-24235655 None:intergenic 40.0%
AGATTTGCCTGTAGTGACTT+GGG - chr6_3:24235770-24235789 None:intergenic 40.0%
AAGATTTGCCTGTAGTGACT+TGG - chr6_3:24235771-24235790 None:intergenic 40.0%
ATTCAACCACCAATACATGG+AGG - chr6_3:24235969-24235988 None:intergenic 40.0%
! AAAAAGCGGAAGCATAAGGA+AGG + chr6_3:24236282-24236301 Msa0945440:CDS 40.0%
! AAAAGCGGAAGCATAAGGAA+GGG + chr6_3:24236283-24236302 Msa0945440:CDS 40.0%
AAACTCAAACCTATGCTCGA+CGG - chr6_3:24236425-24236444 None:intergenic 40.0%
! GGAGCAAGCTTAAAGTATCT+TGG + chr6_3:24236600-24236619 Msa0945440:three_prime_UTR 40.0%
AGTATCTTGGCCATCATTCA+TGG + chr6_3:24236613-24236632 Msa0945440:three_prime_UTR 40.0%
TGACGTAGACAAAAATGGGA+AGG - chr6_3:24236700-24236719 None:intergenic 40.0%
!!! GATTTTTTTTGCATGTGGCC+AGG + chr6_3:24236807-24236826 Msa0945440:three_prime_UTR 40.0%
!! GTTTGGGAGTGTTGAGGTTT+AGG - chr6_3:24227681-24227700 None:intergenic 45.0%
!! TGTTTGGTTTGGGAGTGTTG+AGG - chr6_3:24227687-24227706 None:intergenic 45.0%
ACAACGATAACGAAAGGAGG+CGG - chr6_3:24227980-24227999 None:intergenic 45.0%
CCCTGAACAACGATAACGAA+AGG - chr6_3:24227986-24228005 None:intergenic 45.0%
CAAAACTTGCCTGAAGTTCG+TGG + chr6_3:24228164-24228183 Msa0945440:CDS 45.0%
GTAATTGGACCACGAACTTC+AGG - chr6_3:24228176-24228195 None:intergenic 45.0%
TAGTAGATTTGGGTCCTGCT+TGG + chr6_3:24228276-24228295 Msa0945440:intron 45.0%
CAGAAACAACTTACTCCCTC+CGG - chr6_3:24228929-24228948 None:intergenic 45.0%
CACTTGTCTCAGGAAAGCAA+AGG + chr6_3:24229006-24229025 Msa0945440:intron 45.0%
GCTAAGTAACACGGTTACGT+GGG - chr6_3:24229184-24229203 None:intergenic 45.0%
AGCTAAGTAACACGGTTACG+TGG - chr6_3:24229185-24229204 None:intergenic 45.0%
TAAGAACCCCCATGACCTTT+GGG - chr6_3:24229306-24229325 None:intergenic 45.0%
GGGGTTCTTACTCATCTTGA+TGG + chr6_3:24229316-24229335 Msa0945440:CDS 45.0%
CGAAACAACGACTCAAACAC+CGG + chr6_3:24229368-24229387 Msa0945440:CDS 45.0%
!!! AACGACTCAAACACCGGTTT+TGG + chr6_3:24229374-24229393 Msa0945440:CDS 45.0%
TTCCCATCCCTATGTTCTTG+TGG + chr6_3:24229655-24229674 Msa0945440:CDS 45.0%
GATCCACAAGAACATAGGGA+TGG - chr6_3:24229661-24229680 None:intergenic 45.0%
TTTGCATGCACTTGTTCAGG+AGG - chr6_3:24229701-24229720 None:intergenic 45.0%
CCGATCGCATGTATCATTTG+AGG - chr6_3:24229884-24229903 None:intergenic 45.0%
!! GATCGGTTTGAGCAACAAGT+TGG + chr6_3:24229898-24229917 Msa0945440:intron 45.0%
CTAGTAGATAGTAACCCCTC+GGG + chr6_3:24230140-24230159 Msa0945440:intron 45.0%
! GGTTCTTGGATATTTTCCCG+AGG - chr6_3:24230159-24230178 None:intergenic 45.0%
TGAGTGATATGGTGATCAGC+TGG + chr6_3:24230314-24230333 Msa0945440:intron 45.0%
GGAAATTAGGTGCACATAGC+TGG + chr6_3:24230399-24230418 Msa0945440:intron 45.0%
ATAGCTGGAGTGGGTGATTA+TGG + chr6_3:24230414-24230433 Msa0945440:CDS 45.0%
! TTTTGGCAGCAGAAGGAAGA+GGG - chr6_3:24230473-24230492 None:intergenic 45.0%
!! TTTTTGGCAGCAGAAGGAAG+AGG - chr6_3:24230474-24230493 None:intergenic 45.0%
!! CCTTTCTTTTTGGCAGCAGA+AGG - chr6_3:24230480-24230499 None:intergenic 45.0%
CCTTCTGCTGCCAAAAAGAA+AGG + chr6_3:24230477-24230496 Msa0945440:CDS 45.0%
! ATCGCGCAGTCCTTTCTTTT+TGG - chr6_3:24230490-24230509 None:intergenic 45.0%
TGTTGTATCATGCACACCAC+TGG + chr6_3:24230891-24230910 Msa0945440:intron 45.0%
ACAGGAAAGGAAAGGGATGT+AGG + chr6_3:24230989-24231008 Msa0945440:intron 45.0%
CAGGAAAGGAAAGGGATGTA+GGG + chr6_3:24230990-24231009 Msa0945440:intron 45.0%
AGGAAAGGAAAGGGATGTAG+GGG + chr6_3:24230991-24231010 Msa0945440:intron 45.0%
TGATGCACAAGGTACAAACG+AGG + chr6_3:24231126-24231145 Msa0945440:CDS 45.0%
TGCTTCTGAATCATCTGACG+GGG + chr6_3:24231204-24231223 Msa0945440:CDS 45.0%
TTCAGAAGAGGAAGAGGAAG+AGG + chr6_3:24231747-24231766 Msa0945440:CDS 45.0%
AGAGGAAGAGGAAGATGAAG+AGG + chr6_3:24231765-24231784 Msa0945440:CDS 45.0%
GAGGATGAAGATGACACACA+TGG + chr6_3:24231784-24231803 Msa0945440:CDS 45.0%
TTTCCTTGCAGAAGATGGCA+TGG + chr6_3:24232050-24232069 Msa0945440:intron 45.0%
TTCCTTGCAGAAGATGGCAT+GGG + chr6_3:24232051-24232070 Msa0945440:intron 45.0%
TTCAAAGTGGAAGGAGTCGT+TGG + chr6_3:24232080-24232099 Msa0945440:CDS 45.0%
CGAAGAGAATGATAGTAGCG+AGG + chr6_3:24232185-24232204 Msa0945440:CDS 45.0%
TATCTATTCGTCGCTGACAG+GGG - chr6_3:24232332-24232351 None:intergenic 45.0%
CTATCTATTCGTCGCTGACA+GGG - chr6_3:24232333-24232352 None:intergenic 45.0%
GCAATATACGAGAGATGGAC+TGG + chr6_3:24232482-24232501 Msa0945440:intron 45.0%
GCTCATAAGTTTGGCACACT+TGG - chr6_3:24232538-24232557 None:intergenic 45.0%
! ATTCGCAACCGTTTTGTGTC+CGG + chr6_3:24232588-24232607 Msa0945440:CDS 45.0%
! CCGTTTTGTGTCCGGAAATT+TGG + chr6_3:24232596-24232615 Msa0945440:CDS 45.0%
! GGCAGCTTTTGCCAAATTTC+CGG - chr6_3:24232610-24232629 None:intergenic 45.0%
!! GGGAGTTGATAAAGAAGCTG+AGG + chr6_3:24232767-24232786 Msa0945440:CDS 45.0%
AGGGGGAACAACACATTCTT+TGG + chr6_3:24232917-24232936 Msa0945440:intron 45.0%
TCTCATTTGTTCGAAGCAGG+GGG - chr6_3:24233019-24233038 None:intergenic 45.0%
!! GATTGGTGCCAACTTAGCAT+GGG - chr6_3:24233140-24233159 None:intergenic 45.0%
!! TGATTGGTGCCAACTTAGCA+TGG - chr6_3:24233141-24233160 None:intergenic 45.0%
TTGATTGGGCCAACTCAACT+TGG + chr6_3:24233212-24233231 Msa0945440:intron 45.0%
GTATCACAGCCAAAGCTCAA+AGG + chr6_3:24233341-24233360 Msa0945440:intron 45.0%
CTCAGGGTCATCATCATATG+TGG - chr6_3:24233610-24233629 None:intergenic 45.0%
TATCTTCCTCTGGTGTCTCA+GGG - chr6_3:24233626-24233645 None:intergenic 45.0%
TCATTGCCAGTATCTTCCTC+TGG - chr6_3:24233636-24233655 None:intergenic 45.0%
GGAAATTGACATCTGGTGCA+TGG - chr6_3:24233725-24233744 None:intergenic 45.0%
GCTCAATCTCCTCCTTTAAC+TGG - chr6_3:24233794-24233813 None:intergenic 45.0%
GAAGCCTTCTACCTCTAATC+TGG - chr6_3:24233865-24233884 None:intergenic 45.0%
AGGGACATACCTAAGATTGG+AGG + chr6_3:24233890-24233909 Msa0945440:CDS 45.0%
CCCTACCATCCAATATTGGT+TGG + chr6_3:24233951-24233970 Msa0945440:CDS 45.0%
CCCAACCAATATTGGATGGT+AGG - chr6_3:24233955-24233974 None:intergenic 45.0%
!! GGTCTGGGTTTTTAATTGGC+CGG + chr6_3:24234166-24234185 Msa0945440:intron 45.0%
!! GTCTGGGTTTTTAATTGGCC+GGG + chr6_3:24234167-24234186 Msa0945440:intron 45.0%
AGGAATAGTGCACTCCTTGA+TGG + chr6_3:24234263-24234282 Msa0945440:intron 45.0%
GCACCAAATGCAATACACCA+AGG - chr6_3:24234353-24234372 None:intergenic 45.0%
AAACTGTCCGACTTCAACAC+TGG - chr6_3:24234379-24234398 None:intergenic 45.0%
! AAACAGGAAGAGCATAGAGG+GGG - chr6_3:24234614-24234633 None:intergenic 45.0%
CTCAACAACAACTGCAGTTG+CGG - chr6_3:24235063-24235082 None:intergenic 45.0%
! CTTGAAGTAGCTCGGTTTGA+AGG + chr6_3:24235185-24235204 Msa0945440:CDS 45.0%
GCAGCTATTCGAACAGTTAG+TGG + chr6_3:24235209-24235228 Msa0945440:CDS 45.0%
CGAACAGTTAGTGGGATTAG+GGG + chr6_3:24235218-24235237 Msa0945440:CDS 45.0%
GAACAGTTAGTGGGATTAGG+GGG + chr6_3:24235219-24235238 Msa0945440:CDS 45.0%
AACCAGCCAAAAAAGAAGGG+TGG + chr6_3:24235355-24235374 Msa0945440:CDS 45.0%
ACCAGCCAAAAAAGAAGGGT+GGG + chr6_3:24235356-24235375 Msa0945440:CDS 45.0%
AAGGGTGGGCAAATCAAAGA+AGG + chr6_3:24235370-24235389 Msa0945440:CDS 45.0%
! ACATTGTTTTCCTGCGAGCA+TGG + chr6_3:24235434-24235453 Msa0945440:CDS 45.0%
GGCTGTAATGCTGTTGTCAA+CGG - chr6_3:24235490-24235509 None:intergenic 45.0%
TGACAACAGCATTACAGCCT+AGG + chr6_3:24235491-24235510 Msa0945440:CDS 45.0%
GACAACAGCATTACAGCCTA+GGG + chr6_3:24235492-24235511 Msa0945440:CDS 45.0%
TTCTCATTCCTTTCCAGGTC+TGG - chr6_3:24235519-24235538 None:intergenic 45.0%
! AGTGACTTGGGAATCACCAA+TGG - chr6_3:24235758-24235777 None:intergenic 45.0%
TTTCGCTTGGGCATATGCTT+AGG - chr6_3:24235809-24235828 None:intergenic 45.0%
AGCATATGCCCAAGCGAAAA+AGG + chr6_3:24235810-24235829 Msa0945440:CDS 45.0%
!! AACGACAGCCTTTTTCGCTT+GGG - chr6_3:24235821-24235840 None:intergenic 45.0%
!! AAACGACAGCCTTTTTCGCT+TGG - chr6_3:24235822-24235841 None:intergenic 45.0%
! GGCTGTCGTTTGATGATAGA+AGG + chr6_3:24235831-24235850 Msa0945440:CDS 45.0%
TTTCCCTTGCCTCCATGTAT+TGG + chr6_3:24235957-24235976 Msa0945440:intron 45.0%
! AAAGCGGAAGCATAAGGAAG+GGG + chr6_3:24236284-24236303 Msa0945440:CDS 45.0%
ACTTGAAGCAGAGAGAGCAA+AGG + chr6_3:24236320-24236339 Msa0945440:CDS 45.0%
TGTCTCGTCTTTCTTCTCTC+CGG - chr6_3:24236368-24236387 None:intergenic 45.0%
AATATTCCTCGGGATGAGGT+AGG - chr6_3:24236770-24236789 None:intergenic 45.0%
TTTCAGAGCTGCAATGGCGT+TGG - chr6_3:24227642-24227661 None:intergenic 50.0%
ATCAGCATCGTTGACAGCCA+TGG - chr6_3:24227738-24227757 None:intergenic 50.0%
ATCGCCATCGTGCTTCTTCT+TGG - chr6_3:24227816-24227835 None:intergenic 50.0%
GCAAGTTCATGGGTTCCCAA+AGG + chr6_3:24229288-24229307 Msa0945440:CDS 50.0%
TCATGGGTTCCCAAAGGTCA+TGG + chr6_3:24229294-24229313 Msa0945440:CDS 50.0%
CATGGGTTCCCAAAGGTCAT+GGG + chr6_3:24229295-24229314 Msa0945440:CDS 50.0%
ATGGGTTCCCAAAGGTCATG+GGG + chr6_3:24229296-24229315 Msa0945440:CDS 50.0%
GTAAGAACCCCCATGACCTT+TGG - chr6_3:24229307-24229326 None:intergenic 50.0%
TGGGAAGTTCGCCAAGATAG+AGG - chr6_3:24229641-24229660 None:intergenic 50.0%
TTAGGTGCACATAGCTGGAG+TGG + chr6_3:24230404-24230423 Msa0945440:intron 50.0%
TAGGTGCACATAGCTGGAGT+GGG + chr6_3:24230405-24230424 Msa0945440:intron 50.0%
AACTCTGCCATGACGAGCAA+AGG + chr6_3:24230627-24230646 Msa0945440:CDS 50.0%
AAAGGAAAGGGATGTAGGGG+TGG + chr6_3:24230994-24231013 Msa0945440:CDS 50.0%
!! GAAGCTCTAGGTGATGCACA+AGG + chr6_3:24231115-24231134 Msa0945440:CDS 50.0%
AACGAGGATGTAGAGCAGCA+TGG + chr6_3:24231142-24231161 Msa0945440:CDS 50.0%
AAATATGGCAGGCCAGGCTT+AGG + chr6_3:24231609-24231628 Msa0945440:intron 50.0%
CATAGGGATGGGAATAGGCT+AGG - chr6_3:24231655-24231674 None:intergenic 50.0%
AGAGGAAGAGGAAGAGGAAG+AGG + chr6_3:24231753-24231772 Msa0945440:CDS 50.0%
GTAGTCACACTCTCAGTACC+AGG + chr6_3:24231881-24231900 Msa0945440:intron 50.0%
TTCCCATGCCATCTTCTGCA+AGG - chr6_3:24232056-24232075 None:intergenic 50.0%
AAAGTGGAAGGAGTCGTTGG+CGG + chr6_3:24232083-24232102 Msa0945440:CDS 50.0%
AACTAGGAGATTTCCGTGCG+AGG - chr6_3:24232116-24232135 None:intergenic 50.0%
GCTATCTATTCGTCGCTGAC+AGG - chr6_3:24232334-24232353 None:intergenic 50.0%
!! ACGAGAGATGGACTGGATGA+TGG + chr6_3:24232489-24232508 Msa0945440:CDS 50.0%
!! AGATGGACTGGATGATGGAG+TGG + chr6_3:24232494-24232513 Msa0945440:CDS 50.0%
GGCACACTTGGAACAATCCT+CGG - chr6_3:24232526-24232545 None:intergenic 50.0%
ATAAAGAAGCTGAGGAGCGG+AGG + chr6_3:24232775-24232794 Msa0945440:CDS 50.0%
AAGCAGGGGGACTCAATCTT+TGG - chr6_3:24233006-24233025 None:intergenic 50.0%
ACCTATGACCTAGGTCCTAG+CGG + chr6_3:24233299-24233318 Msa0945440:intron 50.0%
TCTAAAGAAGTCCCACCGCT+AGG - chr6_3:24233317-24233336 None:intergenic 50.0%
TCCACCGCTGAGTTAGCTAA+TGG - chr6_3:24233396-24233415 None:intergenic 50.0%
GTATCTTCCTCTGGTGTCTC+AGG - chr6_3:24233627-24233646 None:intergenic 50.0%
GAGACACCAGAGGAAGATAC+TGG + chr6_3:24233627-24233646 Msa0945440:intron 50.0%
GGGTTGTTCACGATGGAACT+TGG - chr6_3:24233667-24233686 None:intergenic 50.0%
AGGTAGAAGGCTTCCGAACA+GGG + chr6_3:24233871-24233890 Msa0945440:CDS 50.0%
CACCCCCAACCAATATTGGA+TGG - chr6_3:24233959-24233978 None:intergenic 50.0%
CCAACACCCCCAACCAATAT+TGG - chr6_3:24233963-24233982 None:intergenic 50.0%
! CCAATATTGGTTGGGGGTGT+TGG + chr6_3:24233960-24233979 Msa0945440:CDS 50.0%
GGTCTAGGGGAGGAAAATGT+TGG + chr6_3:24233981-24234000 Msa0945440:CDS 50.0%
GTTGGATACATGCAGGTCAG+CGG + chr6_3:24233999-24234018 Msa0945440:intron 50.0%
! AACAGGAAGAGCATAGAGGG+GGG - chr6_3:24234613-24234632 None:intergenic 50.0%
AGGCCAGGTTAAAGCGACAT+AGG + chr6_3:24234663-24234682 Msa0945440:intron 50.0%
!! CCACCTATGTCGCTTTAACC+TGG - chr6_3:24234669-24234688 None:intergenic 50.0%
CCAGGTTAAAGCGACATAGG+TGG + chr6_3:24234666-24234685 Msa0945440:CDS 50.0%
GCAAGGCAATGCATGTGTTC+TGG - chr6_3:24234815-24234834 None:intergenic 50.0%
! GCAACTATTCCAGTGTTGGG+AGG - chr6_3:24234860-24234879 None:intergenic 50.0%
! GTGTTGGCAGACCTGATTGT+TGG - chr6_3:24234897-24234916 None:intergenic 50.0%
GATTAGGGGGCAAGTCAAGA+AGG + chr6_3:24235232-24235251 Msa0945440:CDS 50.0%
GGTGATTCCCAAGTCACTAC+AGG + chr6_3:24235760-24235779 Msa0945440:CDS 50.0%
!! GAAGGTGTTGAACAAGAGCG+TGG - chr6_3:24235895-24235914 None:intergenic 50.0%
CCACCAATACATGGAGGCAA+GGG - chr6_3:24235963-24235982 None:intergenic 50.0%
ACCACCAATACATGGAGGCA+AGG - chr6_3:24235964-24235983 None:intergenic 50.0%
TGAAGCAGAGAGAGCAAAGG+AGG + chr6_3:24236323-24236342 Msa0945440:CDS 50.0%
TTTCTTCCTACCTCATCCCG+AGG + chr6_3:24236761-24236780 Msa0945440:three_prime_UTR 50.0%
GCTCACAGAACTCGTCAAGC+TGG + chr6_3:24227770-24227789 Msa0945440:CDS 55.0%
GCGACGCTGTTCTTTCTCGA+CGG - chr6_3:24227921-24227940 None:intergenic 55.0%
AACACAATCCACACCTGGGG+AGG - chr6_3:24228010-24228029 None:intergenic 55.0%
GCAAAGGCGACTGCAGTTTG+TGG + chr6_3:24229022-24229041 Msa0945440:CDS 55.0%
TGGGTTCCCAAAGGTCATGG+GGG + chr6_3:24229297-24229316 Msa0945440:CDS 55.0%
! GAAGGAAGAGGGCATGGATC+AGG - chr6_3:24230462-24230481 None:intergenic 55.0%
! TATGCTCCCATGTCTGGGGT+TGG + chr6_3:24230525-24230544 Msa0945440:CDS 55.0%
! ATGCTCCCATGTCTGGGGTT+GGG + chr6_3:24230526-24230545 Msa0945440:CDS 55.0%
AGATCCCCAACCCCAGACAT+GGG - chr6_3:24230534-24230553 None:intergenic 55.0%
AAGATCCCCAACCCCAGACA+TGG - chr6_3:24230535-24230554 None:intergenic 55.0%
AGGCCTTGCAAAGCCTAGCT+CGG + chr6_3:24231629-24231648 Msa0945440:intron 55.0%
TGGCGGAAAGAATCCTCGCA+CGG + chr6_3:24232100-24232119 Msa0945440:CDS 55.0%
ACTTGGAACAATCCTCGGCG+TGG - chr6_3:24232521-24232540 None:intergenic 55.0%
ACCGCTAGGACCTAGGTCAT+AGG - chr6_3:24233303-24233322 None:intergenic 55.0%
TATGACCTAGGTCCTAGCGG+TGG + chr6_3:24233302-24233321 Msa0945440:intron 55.0%
ATGACCTAGGTCCTAGCGGT+GGG + chr6_3:24233303-24233322 Msa0945440:intron 55.0%
GCCATTAGCTAACTCAGCGG+TGG + chr6_3:24233392-24233411 Msa0945440:intron 55.0%
TGATGACCCTGAGACACCAG+AGG + chr6_3:24233617-24233636 Msa0945440:intron 55.0%
GAGGTAGAAGGCTTCCGAAC+AGG + chr6_3:24233870-24233889 Msa0945440:CDS 55.0%
!! TTGGTTGGGGGTGTTGGTCT+AGG + chr6_3:24233966-24233985 Msa0945440:CDS 55.0%
!! TGGTTGGGGGTGTTGGTCTA+GGG + chr6_3:24233967-24233986 Msa0945440:CDS 55.0%
! GTGCCAGCCAGTGTTGAAGT+CGG + chr6_3:24234369-24234388 Msa0945440:intron 55.0%
TGTCCGACTTCAACACTGGC+TGG - chr6_3:24234375-24234394 None:intergenic 55.0%
GAGGGCCCCAAAACATAGCA+AGG - chr6_3:24234832-24234851 None:intergenic 55.0%
! CAGTGTTGGGAGGTGCAAGA+GGG - chr6_3:24234850-24234869 None:intergenic 55.0%
!!! GCCCACCCTTCTTTTTTGGC+TGG - chr6_3:24235360-24235379 None:intergenic 55.0%
CAACTTGAGTCCATGCTCGC+AGG - chr6_3:24235447-24235466 None:intergenic 55.0%
! GCGTGGATTTTACGCTCACG+AGG - chr6_3:24235878-24235897 None:intergenic 55.0%
CCCTTGCCTCCATGTATTGG+TGG + chr6_3:24235960-24235979 Msa0945440:intron 55.0%
AGAGAGAGCAAAGGAGGAGC+TGG + chr6_3:24236329-24236348 Msa0945440:CDS 55.0%
! AGCTGGTGTCGAAAAAGCGC+CGG + chr6_3:24236346-24236365 Msa0945440:CDS 55.0%
CACGATGGCGATGCCGATGA+TGG + chr6_3:24227824-24227843 Msa0945440:CDS 60.0%
GCAGCAGAAGGAAGAGGGCA+TGG - chr6_3:24230468-24230487 None:intergenic 60.0%
! TGCTCCCATGTCTGGGGTTG+GGG + chr6_3:24230527-24230546 Msa0945440:CDS 60.0%
GGCTTTGCAAGGCCTAAGCC+TGG - chr6_3:24231624-24231643 None:intergenic 60.0%
AGGCCGAGCTAGGCTTTGCA+AGG - chr6_3:24231635-24231654 None:intergenic 60.0%
GGAATAGGCTAGGCCGAGCT+AGG - chr6_3:24231645-24231664 None:intergenic 60.0%
AAGTCCCACCGCTAGGACCT+AGG - chr6_3:24233310-24233329 None:intergenic 60.0%
!! GGTTGGGGGTGTTGGTCTAG+GGG + chr6_3:24233968-24233987 Msa0945440:CDS 60.0%
! CCAGTGTTGGGAGGTGCAAG+AGG - chr6_3:24234851-24234870 None:intergenic 60.0%
CCTCTTGCACCTCCCAACAC+TGG + chr6_3:24234848-24234867 Msa0945440:CDS 60.0%
TACAGCCTAGGGACCAGACC+TGG + chr6_3:24235503-24235522 Msa0945440:CDS 60.0%
CCTTTCCAGGTCTGGTCCCT+AGG - chr6_3:24235511-24235530 None:intergenic 60.0%
CCTAGGGACCAGACCTGGAA+AGG + chr6_3:24235508-24235527 Msa0945440:CDS 60.0%
CGTTGTTCAGGGTCCTCCCC+AGG + chr6_3:24227994-24228013 Msa0945440:CDS 65.0%
TTCAGGGTCCTCCCCAGGTG+TGG + chr6_3:24227999-24228018 Msa0945440:intron 65.0%
TGATGGAGTGGTCCACGCCG+AGG + chr6_3:24232506-24232525 Msa0945440:CDS 65.0%
!! TGGGGGTGTTGGTCTAGGGG+AGG + chr6_3:24233971-24233990 Msa0945440:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 24227554 24236921 24227554 ID=Msa0945440;Name=Msa0945440
chr6_3 mRNA 24227554 24236921 24227554 ID=Msa0945440-mRNA-1;Parent=Msa0945440;Name=Msa0945440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=183|0.93|0.88|1|1|1|17|487|1169
chr6_3 exon 24227554 24228015 24227554 ID=Msa0945440-mRNA-1:exon:6840;Parent=Msa0945440-mRNA-1
chr6_3 exon 24228116 24228206 24228116 ID=Msa0945440-mRNA-1:exon:6841;Parent=Msa0945440-mRNA-1
chr6_3 exon 24229018 24229136 24229018 ID=Msa0945440-mRNA-1:exon:6842;Parent=Msa0945440-mRNA-1
chr6_3 exon 24229262 24229452 24229262 ID=Msa0945440-mRNA-1:exon:6843;Parent=Msa0945440-mRNA-1
chr6_3 exon 24229580 24229790 24229580 ID=Msa0945440-mRNA-1:exon:6844;Parent=Msa0945440-mRNA-1
chr6_3 exon 24230408 24230648 24230408 ID=Msa0945440-mRNA-1:exon:6845;Parent=Msa0945440-mRNA-1
chr6_3 exon 24230993 24231348 24230993 ID=Msa0945440-mRNA-1:exon:6846;Parent=Msa0945440-mRNA-1
chr6_3 exon 24231745 24231805 24231745 ID=Msa0945440-mRNA-1:exon:6847;Parent=Msa0945440-mRNA-1
chr6_3 exon 24232061 24232254 24232061 ID=Msa0945440-mRNA-1:exon:6848;Parent=Msa0945440-mRNA-1
chr6_3 exon 24232483 24232863 24232483 ID=Msa0945440-mRNA-1:exon:6849;Parent=Msa0945440-mRNA-1
chr6_3 exon 24233630 24233710 24233630 ID=Msa0945440-mRNA-1:exon:6850;Parent=Msa0945440-mRNA-1
chr6_3 exon 24233795 24234013 24233795 ID=Msa0945440-mRNA-1:exon:6851;Parent=Msa0945440-mRNA-1
chr6_3 exon 24234665 24234904 24234665 ID=Msa0945440-mRNA-1:exon:6852;Parent=Msa0945440-mRNA-1
chr6_3 exon 24235044 24235253 24235044 ID=Msa0945440-mRNA-1:exon:6853;Parent=Msa0945440-mRNA-1
chr6_3 exon 24235334 24235603 24235334 ID=Msa0945440-mRNA-1:exon:6854;Parent=Msa0945440-mRNA-1
chr6_3 exon 24235725 24235934 24235725 ID=Msa0945440-mRNA-1:exon:6855;Parent=Msa0945440-mRNA-1
chr6_3 exon 24236279 24236921 24236279 ID=Msa0945440-mRNA-1:exon:6856;Parent=Msa0945440-mRNA-1
chr6_3 five_prime_UTR 24227554 24227736 24227554 ID=Msa0945440-mRNA-1:five_prime_utr;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24227737 24228015 24227737 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24228116 24228206 24228116 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24229018 24229136 24229018 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24229262 24229452 24229262 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24229580 24229790 24229580 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24230408 24230648 24230408 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24230993 24231348 24230993 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24231745 24231805 24231745 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24232061 24232254 24232061 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24232483 24232863 24232483 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24233630 24233710 24233630 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24233795 24234013 24233795 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24234665 24234904 24234665 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24235044 24235253 24235044 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24235334 24235603 24235334 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24235725 24235934 24235725 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 CDS 24236279 24236434 24236279 ID=Msa0945440-mRNA-1:cds;Parent=Msa0945440-mRNA-1
chr6_3 three_prime_UTR 24236435 24236921 24236435 ID=Msa0945440-mRNA-1:three_prime_utr;Parent=Msa0945440-mRNA-1
Gene Sequence

>Msa0945440

ATGGCTGTCAACGATGCTGATCAATCTCACAAAGCTCACAGAACTCGTCAAGCTGGTCCCAAGAAGAAAACCAAATCCAAGAAGAAGCACGATGGCGATGCCGATGATGGTCAGATTATGCAAAACCCTAAAGCTTTTGCTTATTCTTCATCTAAAAAAGTTAAGAAATTGCAATCTCGTGCCGTCGAGAAAGAACAGCGTCGCCTTCATCTTCCCATTATTGATCGTAGTTATGGTGAACCGCCTCCTTTCGTTATCGTTGTTCAGGGTCCTCCCCAGGTTGGAAAGTCGCTTTTGATTAAGTCTTTGATTAAGCATTACACTAAGCAAAACTTGCCTGAAGTTCGTGGTCCAATTACGATTGTATCAGGAAAGCAAAGGCGACTGCAGTTTGTGGAATGCCCGAATGATATCAATGGCATGATAGATGCAGCCAAGTATGCTGATCTAGCACTTCTTCTTATAGACGGAAGTTATGGTTTTGAAATGGAAACATTTGAATTTCTTAATATTTTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTTACTCATCTTGATGGATTCAAGGATGTTAAAAAGTTGAGGAAAACGAAACAACGACTCAAACACCGGTTTTGGACCGAAATATATGATGGAGCTAAATTGTTTTACTTATCAGGCCTTATTCATGGAAAGTATGTCAAACGTGAAGTTCACAATCTTGCTCGATTCATATCAGTCATGAAGTTTCATCCTCTATCTTGGCGAACTTCCCATCCCTATGTTCTTGTGGATCGTTTTGAAGATATCACTCCTCCTGAACAAGTGCATGCAAATAATAAATGTGATAGAAAAGTCACACTTTATGGCTATCTCAGAGGTTGTAATTTGAAAAAAGGCAATAAGGTGCACATAGCTGGAGTGGGTGATTATGGTTTAGCTCATGTAACTGGTTTGCCTGATCCATGCCCTCTTCCTTCTGCTGCCAAAAAGAAAGGACTGCGCGATAAAGAAAAGTTATTTTATGCTCCCATGTCTGGGGTTGGGGATCTTTTGTACGACAAAGATGCGGTGTACATAAATATTAATGATCACTTTGTTCAATTCTCAAAAGTTGATGATGAAAACTCTGCCATGACGAGCAAAGGAAAGGAAAGGGATGTAGGGGTGGATTTAGTGAAATCACTCCAGAATACCAAATACTCGATCAATGAAAAGCTAGAGAATAGCTTTATCAATCTTTTTGATCAAAAGGGGAAAGTGTCATCAGAAGCTCTAGGTGATGCACAAGGTACAAACGAGGATGTAGAGCAGCATGGAAAAGTAGAAACTTCGGATAATAATGAAATCGATTCGGATGCTTCTGAATCATCTGACGGGGATGAAGCTGATGCCATTACAAATGATGATGGAAACCACTTAAAAGAACAGATTGAGTTTCACAATGGAAGACAAAGGAGAAAGGCAATCTTTGGAAATGACATTGATCATAGTGATCAGATGGATTCAGAAGAGGAAGAGGAAGAGGAAGAGGAAGATGAAGAGGATGAAGATGACACACATGAAGATGGCATGGGAAATATTTCAAAGTGGAAGGAGTCGTTGGCGGAAAGAATCCTCGCACGGAAATCTCCTAGTTTGATGCAACTTGTGTATGGGGAATCTACTAATAATTCGACCTCTATGGACGAAGAGAATGATAGTAGCGAGGATGAAGAAAATGGTGATTTTTTTATACCTAAAGAAGAAGTAAAAAAGCAATATACGAGAGATGGACTGGATGATGGAGTGGTCCACGCCGAGGATTGTTCCAAGTGTGCCAAACTTATGAGCCAGAAATGGGATGAGAAAGATCACGGAGAGATTCGCAACCGTTTTGTGTCCGGAAATTTGGCAAAAGCTGCCAGAAATGCACTTCACAAAGCTAATACTGAAGAGGAAGAGGAAGATGAAGATGTCTATGGTGACTTTGAAGATTTAGAAACAGGAGAAAACCATGAGAATTATAAGACAGATGATGCATTTGCGATAATAACACAGAAGGGAGTTGATAAAGAAGCTGAGGAGCGGAGGCTTAAGAAACTTGCTCTTCATGCAAAATTTGTTTCTAGATATCCTTTTTTAGCTCTCCTTATACCTACACCAGAGGAAGATACTGGCAATGAAAATGAAGCCAAGTTCCATCGTGAACAACCCAATGAAAGTAACTATATTGACAAGTTAAAGGAGGAGATTGAGCTACGAAAACAAATGAATATTGCTGAACTGAACGATCTTGATGAGGATACCAGATTAGAGGTAGAAGGCTTCCGAACAGGGACATACCTAAGATTGGAGGTTCATGATGTTCCCTGTGAAATGGTTGAGCACTTTGATCCCTACCATCCAATATTGGTTGGGGGTGTTGGTCTAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGACATAGGTGGCACAAGAAAGTCCTGAAGACTAGAGACCCAATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGATCTCAATGGAAGGCATCGTATGCTAAAATACACACCAGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCACCTCCCAACACTGGAATAGTTGCTGTTCAGACTTTATCCAACAATCAGGCAACTTTTAGGATTACCGCAACTGCAGTTGTTGTTGAGTTTAATCACGCTGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCGTGCAAGATATTCAAGAAAACAGCACTTATCAAGGATATGTTTACTTCTGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTTAGTGGGATTAGGGGGCAAGTCAAGAAGGTTGCAAAAGAAGAGATAGGTAACCAGCCAAAAAAGAAGGGTGGGCAAATCAAAGAAGGAATTGCCAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGAGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCGTTGACAACAGCATTACAGCCTAGGGACCAGACCTGGAAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGAACACAATCTTCCTATACCTGTAAACAAAGATTCTCTTTACAAGAAAATTGAAAGGAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCACTACAGGCAAATCTTCCCTTTGAATCAAAACCTAAGCATATGCCCAAGCGAAAAAGGCTGTCGTTTGATGATAGAAGGCAAAAGGCTGTCGTTGTTGAACCTCGTGAGCGTAAAATCCACGCTCTTGTTCAACACCTTCAGTTAATGAAAGCTGAAAAGATAAAAAAGCGGAAGCATAAGGAAGGGGAGAAGAGAAAAGTACTTGAAGCAGAGAGAGCAAAGGAGGAGCTGGTGTCGAAAAAGCGCCGGAGAGAAGAAAGACGAGACAAATACCGGACACAAGACAAGTTCAATAAAAAAATCCGTCGAGCATAG
Protein sequence

>Msa0945440

MAVNDADQSHKAHRTRQAGPKKKTKSKKKHDGDADDGQIMQNPKAFAYSSSKKVKKLQSRAVEKEQRRLHLPIIDRSYGEPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENSAMTSKGKERDVGVDLVKSLQNTKYSINEKLENSFINLFDQKGKVSSEALGDAQGTNEDVEQHGKVETSDNNEIDSDASESSDGDEADAITNDDGNHLKEQIEFHNGRQRRKAIFGNDIDHSDQMDSEEEEEEEEEDEEDEDDTHEDGMGNISKWKESLAERILARKSPSLMQLVYGESTNNSTSMDEENDSSEDEENGDFFIPKEEVKKQYTRDGLDDGVVHAEDCSKCAKLMSQKWDEKDHGEIRNRFVSGNLAKAARNALHKANTEEEEEDEDVYGDFEDLETGENHENYKTDDAFAIITQKGVDKEAEERRLKKLALHAKFVSRYPFLALLIPTPEEDTGNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKKKGGQIKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQANLPFESKPKHMPKRKRLSFDDRRQKAVVVEPRERKIHALVQHLQLMKAEKIKKRKHKEGEKRKVLEAERAKEELVSKKRRREERRDKYRTQDKFNKKIRRA*