AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115400 MtrunA17_Chr1g0212491 95.083 1322 34 1 1 1291 1 1322 0.0 2585
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115400 AT5G13680.1 57.421 1334 507 14 1 1289 1 1318 0.0 1500

Find 296 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTATCTGTTTCCCATTA+TGG 0.170429 1_3:-34272617 Msa0115400:CDS
TTCAGATGGAGAAAACTTTA+TGG 0.189369 1_3:-34273491 Msa0115400:intron
TGTTGTCTACGGGGAAATTT+TGG 0.193953 1_3:+34271589 None:intergenic
TGTCAGGCAGGTCAACAATT+TGG 0.206695 1_3:-34271730 Msa0115400:CDS
ACACTTGAAGAGCTTGTTAT+TGG 0.210533 1_3:-34272440 Msa0115400:CDS
GACATTGTCGATATATTTAA+TGG 0.211267 1_3:-34272077 Msa0115400:CDS
ATGAAAATTACATACATATA+TGG 0.211922 1_3:-34271995 Msa0115400:CDS
TCGATATTGTATTGCATTAA+TGG 0.217173 1_3:+34271198 None:intergenic
AAGATTTGGGAACGAGATTC+AGG 0.231198 1_3:-34273385 Msa0115400:CDS
ATTCATCCTTTCCCAGATTA+AGG 0.231298 1_3:+34270875 None:intergenic
AGTATGTGCATACTCGTTTA+TGG 0.241310 1_3:+34269116 None:intergenic
AGTGGGGTGCTTACAGTTGC+TGG 0.248131 1_3:-34270901 Msa0115400:CDS
TATCACGGAAACTTAAGATT+TGG 0.250979 1_3:-34273399 Msa0115400:CDS
TCCGCAGTAACAGCAGAAAA+AGG 0.261607 1_3:-34272025 Msa0115400:CDS
AGTATCTAATTTCATGCTTC+AGG 0.268389 1_3:+34273068 None:intergenic
TGCAGTTCTGATCTTCTTGC+TGG 0.268402 1_3:-34273154 Msa0115400:CDS
AGTTGCTGGGTTCCTTAATC+TGG 0.272201 1_3:-34270887 Msa0115400:CDS
TGCTGTCTATGATGCTGCTT+TGG 0.282386 1_3:-34271322 Msa0115400:CDS
GAATATTTACTGGCAGGATT+TGG 0.291606 1_3:+34272410 None:intergenic
ACAGTAATCCAGGGCAATTT+TGG 0.294155 1_3:+34270789 None:intergenic
CCAGGATTGCTGACATGTTC+AGG 0.304653 1_3:-34272491 Msa0115400:CDS
GGGGAGTTAGACTCAAAGTA+TGG 0.306448 1_3:-34272056 Msa0115400:CDS
TTCTAGGGTATATACATTCT+AGG 0.306612 1_3:+34271898 None:intergenic
TGTCACTGGTGGCGGATCTT+TGG 0.307921 1_3:-34272336 Msa0115400:CDS
GAAGTTATTGCTGTAGTTAC+TGG 0.311951 1_3:-34274671 Msa0115400:intron
CACCCTCATTTAGTGAGCTT+TGG 0.315175 1_3:+34272570 None:intergenic
TCTTCCCAAGTTTCAATTGA+TGG 0.316773 1_3:+34272731 None:intergenic
CCATCTCCTCGCCATGATAT+AGG 0.322337 1_3:+34273460 None:intergenic
TTTCGTCGTCGGAGTTTAAT+CGG 0.324642 1_3:+34275020 None:intergenic
ATGTATATACCCTAGAAAAT+TGG 0.332142 1_3:-34271892 Msa0115400:CDS
AACCTTTGCAGTTGATTTGT+TGG 0.333143 1_3:-34273006 Msa0115400:CDS
CATATATGCAGAATATTTAC+TGG 0.334000 1_3:+34272400 None:intergenic
GTCAGGCAGGTCAACAATTT+GGG 0.339768 1_3:-34271729 Msa0115400:CDS
ACTTCGAGGCTTCTATTTGC+AGG 0.343023 1_3:-34272546 Msa0115400:CDS
TACCTTCACGTTTCTCTGAT+TGG 0.345123 1_3:+34270533 None:intergenic
CAGTTGATTTGTTGGACTCT+TGG 0.348830 1_3:-34272998 Msa0115400:CDS
ATCACGGAAACTTAAGATTT+GGG 0.352844 1_3:-34273398 Msa0115400:CDS
ATACCCTAGAAAATTGGTTT+TGG 0.358063 1_3:-34271886 Msa0115400:CDS
AAATGCAGCTAACTGGTTCT+TGG 0.362564 1_3:+34272787 None:intergenic
TTGGTTTCCCTTATGATGTT+TGG 0.365750 1_3:-34269240 Msa0115400:CDS
AACATTAGCAACCTCTGAAC+AGG 0.367349 1_3:+34271629 None:intergenic
GATCCACATTACATCTTGTA+TGG 0.371749 1_3:-34272655 Msa0115400:CDS
TGCAAGGAAGCTACAGCAAA+TGG 0.374372 1_3:-34269205 Msa0115400:CDS
CTTATCGTGCTATTAATAAC+TGG 0.374570 1_3:-34270924 Msa0115400:CDS
ACGAGAGCTGAAATCTTTGT+TGG 0.374668 1_3:-34269259 Msa0115400:CDS
CTATTTGCAGGAAATAGAAT+TGG 0.375015 1_3:-34272534 Msa0115400:CDS
AAGAAAGGAAGAAATTCTTT+TGG 0.377148 1_3:+34271246 None:intergenic
CCTGAACATGTCAGCAATCC+TGG 0.377770 1_3:+34272491 None:intergenic
TTACTTGTCCTGTTTCAATC+TGG 0.379189 1_3:-34270962 Msa0115400:CDS
TAGCAGGGCTTTCTGTAAAA+TGG 0.382079 1_3:+34271523 None:intergenic
ACATTGTCGATATATTTAAT+GGG 0.383887 1_3:-34272076 Msa0115400:CDS
TGCTGTGACTGAAACCATAA+TGG 0.384145 1_3:+34272603 None:intergenic
CGCTCCAACTCTTGCAAGAA+AGG 0.385173 1_3:+34271231 None:intergenic
ATTAATTTCTGCAAGGGATT+GGG 0.387792 1_3:-34270740 Msa0115400:CDS
AACCCTAATGTCACTCTCCT+TGG 0.388390 1_3:+34268837 None:intergenic
GCCCAAGGAGAGTGACATTA+GGG 0.397893 1_3:-34268839 Msa0115400:three_prime_UTR
CACCCTCACCAAACATCATA+AGG 0.401503 1_3:+34269232 None:intergenic
GTACATAGGAGGCGGCATTA+AGG 0.405640 1_3:+34272868 None:intergenic
TTGTTGGACTCTTGGTGGTC+AGG 0.407409 1_3:-34272990 Msa0115400:CDS
CAAGTTGTTGGTAATGTTGA+TGG 0.407520 1_3:-34274728 Msa0115400:CDS
TGTTCCGAGGATATTGTTCC+AGG 0.409200 1_3:-34272509 Msa0115400:CDS
TATTAATTTCTGCAAGGGAT+TGG 0.410096 1_3:-34270741 Msa0115400:CDS
AAGTGGTGTTACATGAATAT+TGG 0.415115 1_3:+34272898 None:intergenic
CTGAAAGAAATGCAGCTAAC+TGG 0.416470 1_3:+34272780 None:intergenic
GATGAATTACTGCATCTTGC+CGG 0.418968 1_3:-34270859 Msa0115400:CDS
TCGAAAATTGTCACTGGTGG+CGG 0.419137 1_3:-34272344 Msa0115400:CDS
GCTGTCTATGATGCTGCTTT+GGG 0.422327 1_3:-34271321 Msa0115400:CDS
GTCCTGTTTCAATCTGGATA+AGG 0.423537 1_3:-34270956 Msa0115400:CDS
GTAGCGTTGGTCGGAAGTGC+TGG 0.424705 1_3:-34272269 Msa0115400:CDS
TAAGCCTTCCTCATATTCAT+TGG 0.425523 1_3:+34270627 None:intergenic
AGGAAGGCTTAGAGAAAGTA+GGG 0.426815 1_3:-34270615 Msa0115400:CDS
TCTTCCTTTCTTGCAAGAGT+TGG 0.427137 1_3:-34271235 Msa0115400:CDS
GAGATGCATTACTCATGGTT+AGG 0.427498 1_3:-34271827 Msa0115400:CDS
ATGTTGGCCTCTTCATTTGA+GGG 0.429229 1_3:-34268933 Msa0115400:three_prime_UTR
AGCTTCCATCAATTGAAACT+TGG 0.430354 1_3:-34272736 Msa0115400:CDS
TCTCATACTGAAACAGTGTT+TGG 0.432357 1_3:-34272677 Msa0115400:CDS
TTCTGCAGCCTGCCCTCGGA+TGG 0.432387 1_3:-34272294 Msa0115400:CDS
TACTTCCTTCGATTATCTCA+TGG 0.432391 1_3:-34274822 Msa0115400:CDS
ATTATGAGGCTCTAAAGATA+TGG 0.432491 1_3:-34273114 Msa0115400:CDS
CTCTTTCAGCTGCAACTACC+AGG 0.435656 1_3:-34269515 Msa0115400:CDS
TTCTTCTCATGTACGGGGTA+TGG 0.439570 1_3:-34272828 Msa0115400:CDS
TAGAAGAGAGGACTTAGTTA+AGG 0.442083 1_3:-34270689 Msa0115400:CDS
AGCCTTATCCAGATTGAAAC+AGG 0.443148 1_3:+34270954 None:intergenic
TAACATCTCCACAGTAATCC+AGG 0.444954 1_3:+34270779 None:intergenic
AATGTTGGCCTCTTCATTTG+AGG 0.446858 1_3:-34268934 Msa0115400:three_prime_UTR
CAGAGTAGCAACAATCAATT+CGG 0.446876 1_3:+34268875 None:intergenic
TTGGTGGAAGGAAGAGAGAT+GGG 0.446949 1_3:+34274922 None:intergenic
CCGAGTAGTTTGTAGTATAG+TGG 0.448818 1_3:+34271926 None:intergenic
GCAAGGAAGCTACAGCAAAT+GGG 0.448925 1_3:-34269204 Msa0115400:CDS
TTTAACATAAAGCTCCTACT+TGG 0.449305 1_3:-34268993 Msa0115400:three_prime_UTR
TTTAAAGCATCTTCAAGTAA+TGG 0.449625 1_3:+34271459 None:intergenic
ACTTAAAGCAAGACGAAGTC+AGG 0.451079 1_3:-34273048 Msa0115400:CDS
TGAAGAAACCTTGTTGTCTA+CGG 0.452105 1_3:+34271578 None:intergenic
GAAGAAACCTTGTTGTCTAC+GGG 0.452531 1_3:+34271579 None:intergenic
GAGAGAGGTGCTAAAATAGT+TGG 0.453853 1_3:-34271972 Msa0115400:CDS
AGGAATGGCATCCTCTTAGC+AGG 0.454036 1_3:+34271042 None:intergenic
GTACATGAGAAGAAAATGTT+AGG 0.455119 1_3:+34272837 None:intergenic
GAGAAAGAAGCGCTTCTACT+TGG 0.455519 1_3:-34274800 Msa0115400:CDS
TGAAAATTACATACATATAT+GGG 0.456401 1_3:-34271994 Msa0115400:CDS
GTGGGGTGCTTACAGTTGCT+GGG 0.457358 1_3:-34270900 Msa0115400:CDS
ACGGTTGCGTTCGATGTCTA+AGG 0.464719 1_3:+34274982 None:intergenic
CGATGTCTAAGGCGGAGAAT+CGG 0.467719 1_3:+34274993 None:intergenic
TGCCCAAGGAGAGTGACATT+AGG 0.468125 1_3:-34268840 Msa0115400:three_prime_UTR
CAAGGTTTCTTCAATTCTGA+TGG 0.468375 1_3:-34271568 Msa0115400:CDS
ATCTGTTGTGGTTGGCCGAT+GGG 0.468816 1_3:-34271347 Msa0115400:CDS
TTCAGAGGCTTTGTCGTGGC+GGG 0.469787 1_3:-34269052 Msa0115400:CDS
AGCAATATACCCGAAAAGTA+AGG 0.470663 1_3:-34269089 Msa0115400:CDS
ATTCCAAAGCTCACTAAATG+AGG 0.473123 1_3:-34272573 Msa0115400:CDS
TTCTACTTGGAACTTCGAAC+GGG 0.473345 1_3:-34274787 Msa0115400:CDS
CACACTTACCAATGAATATG+AGG 0.475193 1_3:-34270635 Msa0115400:CDS
GAGACAAGGGGAAAAGTTGA+GGG 0.475967 1_3:+34271082 None:intergenic
GAGGAAGGCTTAGAGAAAGT+AGG 0.476046 1_3:-34270616 Msa0115400:CDS
GCATATTAACCACACTTGCT+CGG 0.476589 1_3:-34271491 Msa0115400:CDS
CTTCAAGCACTTGGTAAGCC+TGG 0.476943 1_3:-34270820 Msa0115400:CDS
TTGTCGAACAGCTAAGTAAC+GGG 0.477371 1_3:+34270582 None:intergenic
CGCTACATCCATCCGAGGGC+AGG 0.477449 1_3:+34272286 None:intergenic
CCTATATCATGGCGAGGAGA+TGG 0.478918 1_3:-34273460 Msa0115400:CDS
AAACGAGTATGCACATACTT+TGG 0.480825 1_3:-34269112 Msa0115400:CDS
CGAAAGTAAGATTTCTGAAG+TGG 0.481177 1_3:-34273180 Msa0115400:CDS
AATAAAAGTTATCCGTGAAA+AGG 0.481467 1_3:-34271433 Msa0115400:CDS
ACTTAGCTGTTCGACAAAGA+AGG 0.484652 1_3:-34270576 Msa0115400:CDS
CCACTATACTACAAACTACT+CGG 0.486362 1_3:-34271926 Msa0115400:CDS
ACCCTAATGTCACTCTCCTT+GGG 0.488636 1_3:+34268838 None:intergenic
CTAAATGAGGGTGCACTTCG+AGG 0.488972 1_3:-34272560 Msa0115400:CDS
AGGAGGCGGCATTAAGGATA+AGG 0.489086 1_3:+34272874 None:intergenic
ATATCGACCTTAGGCTGAAA+AGG 0.489201 1_3:-34271182 Msa0115400:CDS
GTTGCTAATGTTATGCTAGC+TGG 0.490803 1_3:-34271618 Msa0115400:CDS
TTTGGTGGAAGGAAGAGAGA+TGG 0.490867 1_3:+34274921 None:intergenic
TTCTGCAAGGGATTGGGAGG+AGG 0.491272 1_3:-34270734 Msa0115400:CDS
GTGCTATTAATAACTGGAGT+GGG 0.491757 1_3:-34270918 Msa0115400:CDS
TGCGAAGAACTTCAAGCACT+TGG 0.494136 1_3:-34270829 Msa0115400:CDS
GAAAGAAGCAAATTTAGTGT+TGG 0.494704 1_3:-34273217 Msa0115400:CDS
AGAGACAAGGGGAAAAGTTG+AGG 0.496669 1_3:+34271081 None:intergenic
TTGATTTGTTGGACTCTTGG+TGG 0.497144 1_3:-34272995 Msa0115400:CDS
GGACTTAGTTAAGGTTGTGA+AGG 0.497788 1_3:-34270680 Msa0115400:CDS
TGTATTTCGCTTAGTCCTGA+TGG 0.499385 1_3:-34274695 Msa0115400:CDS
CTCTCAAAGAAAACAATGGA+GGG 0.499492 1_3:+34273250 None:intergenic
GGGATTGGGAGGAGGCTATG+AGG 0.500559 1_3:-34270726 Msa0115400:CDS
ATTACAGTCACAGTTCTGAA+TGG 0.503697 1_3:+34268902 None:intergenic
GCTTCCATCAATTGAAACTT+GGG 0.504667 1_3:-34272735 Msa0115400:CDS
CCCTCGGATGGATGTAGCGT+TGG 0.505342 1_3:-34272282 Msa0115400:CDS
TTGGCAGATTGCATGCTAGC+GGG 0.507730 1_3:-34272211 Msa0115400:CDS
GCTGTGACTGAAACCATAAT+GGG 0.508133 1_3:+34272604 None:intergenic
TATGCAGAATATTTACTGGC+AGG 0.510386 1_3:+34272404 None:intergenic
TGATGAGGAGTTTGCGTTGG+TGG 0.514516 1_3:-34269319 Msa0115400:CDS
AGATTTGGGAACGAGATTCA+GGG 0.514530 1_3:-34273384 Msa0115400:CDS
AATATGCAAAGCTCCCTAGC+AGG 0.515861 1_3:+34271507 None:intergenic
CACTATACTACAAACTACTC+GGG 0.516970 1_3:-34271925 Msa0115400:CDS
ACCCTCACCAAACATCATAA+GGG 0.517197 1_3:+34269233 None:intergenic
CAAGAGATGCTAGGCGTCAG+AGG 0.518206 1_3:-34269491 Msa0115400:CDS
TGAAACTTGGGAAGAACTAG+AGG 0.518716 1_3:-34272723 Msa0115400:CDS
TTCAAAGCTTCTTCAGCAGA+AGG 0.519242 1_3:+34271372 None:intergenic
TTGTATTGCATTAATGGTGT+AGG 0.520840 1_3:+34271204 None:intergenic
TCCCTTATGATGTTTGGTGA+GGG 0.522094 1_3:-34269234 Msa0115400:CDS
AAACTTTCAATTGTCTCAGA+TGG 0.522114 1_3:-34269178 Msa0115400:CDS
AAGGAAGTAACGGTATCATC+AGG 0.524676 1_3:+34274836 None:intergenic
ACAGCAATAACTTCACCATC+AGG 0.524800 1_3:+34274680 None:intergenic
TTAGCTGCATTTCTTTCAGA+TGG 0.525741 1_3:-34272776 Msa0115400:CDS
AGATGAAATTGTGGGAAGAG+AGG 0.526056 1_3:+34274951 None:intergenic
TGTCTCATGCTGATGATCAC+AGG 0.526324 1_3:-34271407 Msa0115400:CDS
GTTGCTGGGTTCCTTAATCT+GGG 0.527667 1_3:-34270886 Msa0115400:CDS
TGGAGCAACATCCTATATCA+TGG 0.527676 1_3:-34273471 Msa0115400:CDS
AGCAAATTTAGTGTTGGTGA+AGG 0.528966 1_3:-34273211 Msa0115400:CDS
CTTCTACTTGGAACTTCGAA+CGG 0.530418 1_3:-34274788 Msa0115400:CDS
GAGTTTAATCGGAGAAGTAA+AGG 0.531515 1_3:+34275031 None:intergenic
TGAAGCTGCCAAAATTGCCC+TGG 0.532848 1_3:-34270797 Msa0115400:CDS
GCTAGGCGTCAGAGGAAAAG+AGG 0.538859 1_3:-34269483 Msa0115400:CDS
GATGCCATTCCTTGAGGCAT+GGG 0.538881 1_3:-34271031 Msa0115400:CDS
GGGAAGAGAGGAAGAAGAGA+CGG 0.539244 1_3:+34274963 None:intergenic
ACGCCTAGCATCTCTTGCCC+TGG 0.539640 1_3:+34269497 None:intergenic
CATCTGTTGTGGTTGGCCGA+TGG 0.540186 1_3:-34271348 Msa0115400:CDS
CTCAGACATATTGCTTCTGC+CGG 0.541174 1_3:-34271147 Msa0115400:CDS
AAATTTATTAATTTCTGCAA+GGG 0.541462 1_3:-34270746 Msa0115400:CDS
TAAATTTATTAATTTCTGCA+AGG 0.543456 1_3:-34270747 Msa0115400:CDS
TGTTGGCCTCTTCATTTGAG+GGG 0.544373 1_3:-34268932 Msa0115400:three_prime_UTR
TAGGCTGAAAAGGTTCGAAA+AGG 0.544383 1_3:-34271172 Msa0115400:CDS
ATTTAGAGATGCATTACTCA+TGG 0.545042 1_3:-34271832 Msa0115400:CDS
GGATTGGGAGGAGGCTATGA+GGG 0.545332 1_3:-34270725 Msa0115400:CDS
CTCAAAGAAAACAATGGAGG+GGG 0.546317 1_3:+34273252 None:intergenic
TGCAAGATGAAACAATTGAC+AGG 0.549124 1_3:+34268806 None:intergenic
AAGTTCTTCGCAAAGCTCAC+CGG 0.549488 1_3:+34270840 None:intergenic
CAAGGAAGCTACAGCAAATG+GGG 0.550663 1_3:-34269203 Msa0115400:CDS
TGTTGAATGTGAAAATTATG+AGG 0.553607 1_3:-34273128 Msa0115400:CDS
GGCAGATTGCATGCTAGCGG+GGG 0.553872 1_3:-34272209 Msa0115400:CDS
GCGTTGGTGGATCATTTGAA+AGG 0.554314 1_3:-34269306 Msa0115400:CDS
GGAGAAGTAAAGGAACTTCA+CGG 0.554798 1_3:+34275041 None:intergenic
TGCTGATGAGGAGTTTGCGT+TGG 0.555574 1_3:-34269322 Msa0115400:CDS
AATTTCTGCAAGGGATTGGG+AGG 0.555927 1_3:-34270737 Msa0115400:CDS
TACTGTGGAGATGTTAACTC+TGG 0.558526 1_3:-34270772 Msa0115400:CDS
TATTTATCGAAAATTGTCAC+TGG 0.558551 1_3:-34272350 Msa0115400:CDS
GGGAAGTGTAGATGAAATTG+TGG 0.558619 1_3:+34274942 None:intergenic
TAATTGTTGATTACCGTGGT+TGG 0.559167 1_3:-34271782 Msa0115400:CDS
TCACCCCATGCCTCAAGGAA+TGG 0.561861 1_3:+34271027 None:intergenic
TGGGTTCCTTAATCTGGGAA+AGG 0.561959 1_3:-34270881 Msa0115400:CDS
TTCCCTTATGATGTTTGGTG+AGG 0.562346 1_3:-34269235 Msa0115400:CDS
GGCATTAAGGATAAGGAAAG+TGG 0.565757 1_3:+34272881 None:intergenic
GATTGCTGACATGTTCAGGT+TGG 0.566898 1_3:-34272487 Msa0115400:CDS
ATCATCATAATAAGAATCGC+CGG 0.567008 1_3:+34271128 None:intergenic
ACATTCATCAATCTGCATGC+AGG 0.567641 1_3:+34268952 None:intergenic
GGATGCCATTCCTTGAGGCA+TGG 0.571376 1_3:-34271032 Msa0115400:CDS
CTACCAGGGCAAGAGATGCT+AGG 0.571458 1_3:-34269500 Msa0115400:CDS
GGCATTACTTGCCTCTTCAG+AGG 0.572262 1_3:-34273362 Msa0115400:CDS
GTTAGGCTAAATAAGTACAT+AGG 0.572706 1_3:+34272854 None:intergenic
GGAATGAGTGCATACACCAC+AGG 0.573716 1_3:-34270463 Msa0115400:CDS
TACTCATGGTTAGGAGACAT+AGG 0.575225 1_3:-34271818 Msa0115400:CDS
TCTTTGGAACAAGAATATCA+AGG 0.575988 1_3:-34272320 Msa0115400:CDS
GCATGGGGTGATTATCTTAG+CGG 0.576346 1_3:-34271015 Msa0115400:CDS
CTAAATAAGTACATAGGAGG+CGG 0.578094 1_3:+34272860 None:intergenic
TGTGTCCGTTCCCTGTTCAG+AGG 0.579657 1_3:-34271640 Msa0115400:CDS
GATAATCACCCCATGCCTCA+AGG 0.580072 1_3:+34271022 None:intergenic
CATTGTCGATATATTTAATG+GGG 0.580082 1_3:-34272075 Msa0115400:CDS
TTTAAAACTCACCGCTATTG+TGG 0.580970 1_3:-34271289 Msa0115400:CDS
TTTGTCGAACAGCTAAGTAA+CGG 0.581671 1_3:+34270581 None:intergenic
GCAATATACCCGAAAAGTAA+GGG 0.582157 1_3:-34269088 Msa0115400:CDS
CGGATGGATGTAGCGTTGGT+CGG 0.582960 1_3:-34272278 Msa0115400:CDS
AAACACTGTTTCAGTATGAG+AGG 0.584971 1_3:+34272679 None:intergenic
TAACCATACAAGATGTAATG+TGG 0.585823 1_3:+34272652 None:intergenic
GGCAGCAGTCAGATTAGCTG+AGG 0.585826 1_3:-34269157 Msa0115400:CDS
GTCCAACAAATCAACTGCAA+AGG 0.587838 1_3:+34273004 None:intergenic
ATTCAGAGGCTTTGTCGTGG+CGG 0.588096 1_3:-34269053 Msa0115400:CDS
GGATGAAATGCATGATTCAG+AGG 0.589037 1_3:-34269067 Msa0115400:CDS
AGCAACCTCTGAACAGGGAA+CGG 0.589210 1_3:+34271635 None:intergenic
AGAGAAAGTAGGGAAGTACT+TGG 0.591990 1_3:-34270605 Msa0115400:CDS
TTTGAAACATCTGTTGTGGT+TGG 0.592108 1_3:-34271355 Msa0115400:CDS
TTTCTCCATGAGATAATCGA+AGG 0.592601 1_3:+34274817 None:intergenic
GCGAACGTGACTCAAGTTGT+TGG 0.593666 1_3:-34274740 Msa0115400:CDS
GAAAGGCATGTCTATGAGAG+TGG 0.594080 1_3:-34269289 Msa0115400:CDS
GGGAGTTAGACTCAAAGTAT+GGG 0.594519 1_3:-34272055 Msa0115400:CDS
GAGATAATCGAAGGAAGTAA+CGG 0.597064 1_3:+34274826 None:intergenic
TCTCAAAGAAAACAATGGAG+GGG 0.599262 1_3:+34273251 None:intergenic
TTCCAAAGCTCACTAAATGA+GGG 0.599705 1_3:-34272572 Msa0115400:CDS
AAAGCATCTTCAAGTAATGG+AGG 0.600148 1_3:+34271462 None:intergenic
GATTTGGGAACGAGATTCAG+GGG 0.600177 1_3:-34273383 Msa0115400:CDS
ATCATAGACAGCATCCCCAT+CGG 0.605005 1_3:+34271332 None:intergenic
GGCATTCAATGCCACAATAG+CGG 0.606077 1_3:+34271278 None:intergenic
AAATTTCCCCGTAGACAACA+AGG 0.606549 1_3:-34271586 Msa0115400:CDS
TCCGTTGCACTAGTCATCGA+TGG 0.607635 1_3:-34272923 Msa0115400:CDS
TGGCAGATTGCATGCTAGCG+GGG 0.609187 1_3:-34272210 Msa0115400:CDS
TTCGAGCCCCTCAAATGAAG+AGG 0.609441 1_3:+34268926 None:intergenic
GGAAGTGTAGATGAAATTGT+GGG 0.609654 1_3:+34274943 None:intergenic
CGTGCTATTAATAACTGGAG+TGG 0.610155 1_3:-34270919 Msa0115400:CDS
TGTGTGGTTCTAATTTATCA+CGG 0.610652 1_3:-34273414 Msa0115400:CDS
GCATGCAGATTGATGAATGT+TGG 0.611259 1_3:-34268949 Msa0115400:three_prime_UTR
TCTCTCAAAGAAAACAATGG+AGG 0.611502 1_3:+34273249 None:intergenic
CAATCCTGGAACAATATCCT+CGG 0.612040 1_3:+34272505 None:intergenic
CTTACCAATGAATATGAGGA+AGG 0.612058 1_3:-34270631 Msa0115400:CDS
AGGCTAAATAAGTACATAGG+AGG 0.613781 1_3:+34272857 None:intergenic
TTATGATGATTGTATGACAC+TGG 0.613858 1_3:-34271115 Msa0115400:CDS
TTATCGAAAATTGTCACTGG+TGG 0.614388 1_3:-34272347 Msa0115400:CDS
GAATCGGAAAGTTTCGTCGT+CGG 0.615189 1_3:+34275009 None:intergenic
TCTGTTGTGGTTGGCCGATG+GGG 0.616135 1_3:-34271346 Msa0115400:CDS
TCAAAGCTTCTTCAGCAGAA+GGG 0.616661 1_3:+34271373 None:intergenic
ATATGCAAAGCTCCCTAGCA+GGG 0.617678 1_3:+34271508 None:intergenic
TACATACATATATGGGAGAG+AGG 0.620907 1_3:-34271987 Msa0115400:CDS
AGCTTCTTCAGCAGAAGGGT+AGG 0.621709 1_3:+34271377 None:intergenic
CTCAGGTCAAGATACCTCCC+AGG 0.621969 1_3:+34269450 None:intergenic
ATTTCTCTCAAAGAAAACAA+TGG 0.622582 1_3:+34273246 None:intergenic
TGAAGATGATGCTGCTTCAG+AGG 0.623423 1_3:-34270503 Msa0115400:CDS
AATAGAATTGGAATGTTCCG+AGG 0.626845 1_3:-34272522 Msa0115400:CDS
AAGCTTTGAAACATCTGTTG+TGG 0.627629 1_3:-34271359 Msa0115400:CDS
TGAAATGAAAGTACTGCCCA+AGG 0.627857 1_3:-34268854 Msa0115400:three_prime_UTR
GAAACTTGGGAAGAACTAGA+GGG 0.629021 1_3:-34272722 Msa0115400:CDS
TGCAATACAATATCGACCTT+AGG 0.629347 1_3:-34271191 Msa0115400:CDS
CTCCAATCAGAGAAACGTGA+AGG 0.633262 1_3:-34270535 Msa0115400:CDS
AATGTAATTGTTGATTACCG+TGG 0.633951 1_3:-34271786 Msa0115400:CDS
AACATCTCCACAGTAATCCA+GGG 0.635223 1_3:+34270780 None:intergenic
AGGCTCACTCCGAGCAAGTG+TGG 0.637620 1_3:+34271482 None:intergenic
GGTCAAGATACCTCCCAGGA+CGG 0.643264 1_3:+34269454 None:intergenic
ACCAACGCTACATCCATCCG+AGG 0.644934 1_3:+34272281 None:intergenic
ATGATTCAGAGGCTTTGTCG+TGG 0.646724 1_3:-34269056 Msa0115400:CDS
TCCAACATAAAATTCCAAGT+AGG 0.648674 1_3:+34268979 None:intergenic
ATGCCATTCCTTGAGGCATG+GGG 0.650240 1_3:-34271030 Msa0115400:CDS
GAATGAGTGCATACACCACA+GGG 0.652356 1_3:-34270462 Msa0115400:intron
TAAGAGGATGCCATTCCTTG+AGG 0.652380 1_3:-34271037 Msa0115400:CDS
ATCAGGTTCAAGATCAACGA+TGG 0.652862 1_3:+34274853 None:intergenic
GCTAATGTTATGCTAGCTGG+AGG 0.656120 1_3:-34271615 Msa0115400:CDS
GCCATCGATGACTAGTGCAA+CGG 0.656192 1_3:+34272922 None:intergenic
GGAATGGCATCCTCTTAGCA+GGG 0.656940 1_3:+34271043 None:intergenic
AAGACGAAGTCAGGTTCATG+TGG 0.657112 1_3:-34273039 Msa0115400:CDS
CAACATCCTATATCATGGCG+AGG 0.662436 1_3:-34273466 Msa0115400:CDS
ACTATACTACAAACTACTCG+GGG 0.664577 1_3:-34271924 Msa0115400:CDS
ACATTAGCAACCTCTGAACA+GGG 0.664902 1_3:+34271630 None:intergenic
ATTGGCAGATTGCATGCTAG+CGG 0.666563 1_3:-34272212 Msa0115400:CDS
TCTTTCAGCTGCAACTACCA+GGG 0.670227 1_3:-34269514 Msa0115400:CDS
AGTAGCAACAATCAATTCGG+CGG 0.674789 1_3:+34268878 None:intergenic
GCAGATTGCATGCTAGCGGG+GGG 0.678001 1_3:-34272208 Msa0115400:CDS
GTTGCGTTCGATGTCTAAGG+CGG 0.687190 1_3:+34274985 None:intergenic
TGCTATTAATAACTGGAGTG+GGG 0.687914 1_3:-34270917 Msa0115400:CDS
CCAACGCTACATCCATCCGA+GGG 0.688790 1_3:+34272282 None:intergenic
AAAATTGCCCTGGATTACTG+TGG 0.690388 1_3:-34270787 Msa0115400:CDS
TTGGTGAGGGTGAAACTGCA+AGG 0.690578 1_3:-34269221 Msa0115400:CDS
GTTGTTGGTAATGTTGATGG+CGG 0.694786 1_3:-34274725 Msa0115400:CDS
TTTGCTACGATGAGTATGTG+TGG 0.700039 1_3:-34273430 Msa0115400:CDS
AAACTTGGGAAGAACTAGAG+GGG 0.708599 1_3:-34272721 Msa0115400:CDS
AAGGAAGCTACAGCAAATGG+GGG 0.711546 1_3:-34269202 Msa0115400:CDS
AAGAAACCTTGTTGTCTACG+GGG 0.719132 1_3:+34271580 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATATATATTTGTATTT+AGG - chr1_3:34270151-34270170 Msa0115400:intron 10.0%
!! ATATATTTATAGTTATTTGT+GGG - chr1_3:34273804-34273823 Msa0115400:intron 10.0%
!! CTTAATAAAATTTGAAAGAA+AGG + chr1_3:34269256-34269275 None:intergenic 15.0%
!!! AATTTTATTAAGTGTATGTT+TGG - chr1_3:34269264-34269283 Msa0115400:CDS 15.0%
!! TTAATTAAAATAAGTCTGTT+CGG - chr1_3:34269647-34269666 Msa0115400:intron 15.0%
!! ATGAAAATTACATACATATA+TGG - chr1_3:34271800-34271819 Msa0115400:CDS 15.0%
!! TGAAAATTACATACATATAT+GGG - chr1_3:34271801-34271820 Msa0115400:CDS 15.0%
!! TAAATTTATTAATTTCTGCA+AGG - chr1_3:34273048-34273067 Msa0115400:CDS 15.0%
!! AAATTTATTAATTTCTGCAA+GGG - chr1_3:34273049-34273068 Msa0115400:CDS 15.0%
!! GTTCATTATAATATGTTATA+AGG + chr1_3:34273481-34273500 None:intergenic 15.0%
!! ATTTAATACATGAAAGATTA+TGG + chr1_3:34273529-34273548 None:intergenic 15.0%
!! CATATATTTATAGTTATTTG+TGG - chr1_3:34273803-34273822 Msa0115400:intron 15.0%
!!! TTTTAGAAAAAGAATAACAA+AGG - chr1_3:34274142-34274161 Msa0115400:intron 15.0%
!!! TAAATTGATTGATTTGATTC+TGG - chr1_3:34269311-34269330 Msa0115400:CDS 20.0%
!! TTTGGATAGATTTATGTTAA+AGG - chr1_3:34269361-34269380 Msa0115400:intron 20.0%
!!! TAATTTAGGAGGTATATAAT+TGG + chr1_3:34269514-34269533 None:intergenic 20.0%
!!! TATACCTCCTAAATTAATTT+TGG - chr1_3:34269518-34269537 Msa0115400:CDS 20.0%
!! AATAAGTTAAAAACAACTTG+TGG - chr1_3:34269837-34269856 Msa0115400:intron 20.0%
!!! AGTTTTTATAAGCTTATATG+TGG - chr1_3:34269971-34269990 Msa0115400:intron 20.0%
!! TGAAAGAAGTTTATCTAAAT+TGG - chr1_3:34270128-34270147 Msa0115400:intron 20.0%
!!! TGTATTCTTATTTGCAAATT+TGG - chr1_3:34270224-34270243 Msa0115400:intron 20.0%
!!! TTACAGTTTACAATTTTGTT+TGG - chr1_3:34270828-34270847 Msa0115400:CDS 20.0%
!! ACATTGTCGATATATTTAAT+GGG - chr1_3:34271719-34271738 Msa0115400:CDS 20.0%
!!! AAATTCTTTTGGATCTTTTT+GGG + chr1_3:34272541-34272560 None:intergenic 20.0%
!! AAGTATATAGCAATGTATAT+GGG + chr1_3:34273377-34273396 None:intergenic 20.0%
!! AAAGTATATAGCAATGTATA+TGG + chr1_3:34273378-34273397 None:intergenic 20.0%
!! ATATACATTGCTATATACTT+TGG - chr1_3:34273377-34273396 Msa0115400:CDS 20.0%
!!! ATATACAAAAGCATGTTAAA+TGG + chr1_3:34273417-34273436 None:intergenic 20.0%
!! ATTATAATATGTTATAAGGC+CGG + chr1_3:34273477-34273496 None:intergenic 20.0%
! GCTTAAAGTTAGAATCAATT+TGG - chr1_3:34269444-34269463 Msa0115400:intron 25.0%
! TAAAGTTAGAATCAATTTGG+AGG - chr1_3:34269447-34269466 Msa0115400:intron 25.0%
! TTATCATACAAATTACACCT+TGG + chr1_3:34269561-34269580 None:intergenic 25.0%
!!! CAATTATAAAAGCACTTACA+CGG + chr1_3:34269712-34269731 None:intergenic 25.0%
! ACTTATTTGAGCTTATCTAT+TGG + chr1_3:34269907-34269926 None:intergenic 25.0%
! ATAAGCTTATAAAAACTTCC+CGG + chr1_3:34269968-34269987 None:intergenic 25.0%
! CAAATAAGAATACAGCTATA+AGG + chr1_3:34270218-34270237 None:intergenic 25.0%
!!! TTGTATTACTGTTTTTCAGA+TGG - chr1_3:34270290-34270309 Msa0115400:intron 25.0%
! ATTTCTCTCAAAGAAAACAA+TGG + chr1_3:34270552-34270571 None:intergenic 25.0%
!!! ATTGTTTTCTTTGAGAGAAA+TGG - chr1_3:34270551-34270570 Msa0115400:CDS 25.0%
! TGTTGAATGTGAAAATTATG+AGG - chr1_3:34270667-34270686 Msa0115400:CDS 25.0%
!!! TTACAATTTTGTTTGGATCA+CGG - chr1_3:34270835-34270854 Msa0115400:CDS 25.0%
!! TAACATTTTCTTCTCATGTA+CGG - chr1_3:34270960-34270979 Msa0115400:CDS 25.0%
! CATATATGCAGAATATTTAC+TGG + chr1_3:34271398-34271417 None:intergenic 25.0%
! TATTTATCGAAAATTGTCAC+TGG - chr1_3:34271445-34271464 Msa0115400:CDS 25.0%
!! TTTCTCATTTTACTCGAATT+TGG - chr1_3:34271636-34271655 Msa0115400:CDS 25.0%
! GACATTGTCGATATATTTAA+TGG - chr1_3:34271718-34271737 Msa0115400:CDS 25.0%
! CATTGTCGATATATTTAATG+GGG - chr1_3:34271720-34271739 Msa0115400:CDS 25.0%
!! AAAATAGTTGGAGTTTTACA+TGG - chr1_3:34271835-34271854 Msa0115400:CDS 25.0%
! ATGTATATACCCTAGAAAAT+TGG - chr1_3:34271903-34271922 Msa0115400:CDS 25.0%
!! AAACCAAAACCAATTTTCTA+GGG + chr1_3:34271915-34271934 None:intergenic 25.0%
!! TTTAAAGCATCTTCAAGTAA+TGG + chr1_3:34272339-34272358 None:intergenic 25.0%
! AATAAAAGTTATCCGTGAAA+AGG - chr1_3:34272362-34272381 Msa0115400:CDS 25.0%
!! GAAATTCTTTTGGATCTTTT+TGG + chr1_3:34272542-34272561 None:intergenic 25.0%
!! AAGAAAGGAAGAAATTCTTT+TGG + chr1_3:34272552-34272571 None:intergenic 25.0%
! TCGATATTGTATTGCATTAA+TGG + chr1_3:34272600-34272619 None:intergenic 25.0%
! AAACAAATATTATCCAGACT+TGG + chr1_3:34273936-34273955 None:intergenic 25.0%
! TAAATGACTAAATCAAACCT+AGG + chr1_3:34274066-34274085 None:intergenic 25.0%
! ATATTCTTGATTTCATCAAC+AGG - chr1_3:34274232-34274251 Msa0115400:intron 25.0%
!! TTTAGTCTTTAGATATGTAG+TGG + chr1_3:34274422-34274441 None:intergenic 25.0%
! AAATGTCACTAAATTTGTGT+TGG + chr1_3:34275041-34275060 None:intergenic 25.0%
AGTTGAAGGTGATTTATGTT+TGG - chr1_3:34269343-34269362 Msa0115400:intron 30.0%
!! AACTTCAATTCTAGAATCAG+AGG - chr1_3:34269409-34269428 Msa0115400:intron 30.0%
!!! TAAATTAATTTTGGCTCCTC+CGG - chr1_3:34269527-34269546 Msa0115400:CDS 30.0%
AAAGTGGGAAACAACATAAA+AGG + chr1_3:34269589-34269608 None:intergenic 30.0%
GAACTCTAGTTAACTTCTAT+CGG + chr1_3:34269997-34270016 None:intergenic 30.0%
TTCAGATGGAGAAAACTTTA+TGG - chr1_3:34270304-34270323 Msa0115400:intron 30.0%
!! TGTGTGGTTCTAATTTATCA+CGG - chr1_3:34270381-34270400 Msa0115400:intron 30.0%
TATCACGGAAACTTAAGATT+TGG - chr1_3:34270396-34270415 Msa0115400:intron 30.0%
ATCACGGAAACTTAAGATTT+GGG - chr1_3:34270397-34270416 Msa0115400:intron 30.0%
GAAAGAAGCAAATTTAGTGT+TGG - chr1_3:34270578-34270597 Msa0115400:CDS 30.0%
!! ATTATGAGGCTCTAAAGATA+TGG - chr1_3:34270681-34270700 Msa0115400:CDS 30.0%
!!! GGTATTTTAGCAACAATCAT+TGG - chr1_3:34270702-34270721 Msa0115400:CDS 30.0%
AGTATCTAATTTCATGCTTC+AGG + chr1_3:34270730-34270749 None:intergenic 30.0%
!! AAGTGGTGTTACATGAATAT+TGG + chr1_3:34270900-34270919 None:intergenic 30.0%
GTTAGGCTAAATAAGTACAT+AGG + chr1_3:34270944-34270963 None:intergenic 30.0%
GTACATGAGAAGAAAATGTT+AGG + chr1_3:34270961-34270980 None:intergenic 30.0%
! AACATTTTCTTCTCATGTAC+GGG - chr1_3:34270961-34270980 Msa0115400:CDS 30.0%
TAACCATACAAGATGTAATG+TGG + chr1_3:34271146-34271165 None:intergenic 30.0%
CTATTTGCAGGAAATAGAAT+TGG - chr1_3:34271261-34271280 Msa0115400:CDS 30.0%
! CATATATGCAGTTTTCTGAT+GGG - chr1_3:34271410-34271429 Msa0115400:CDS 30.0%
!! TCTTTGGAACAAGAATATCA+AGG - chr1_3:34271475-34271494 Msa0115400:CDS 30.0%
!! TTCTAGGGTATATACATTCT+AGG + chr1_3:34271900-34271919 None:intergenic 30.0%
!! ATACCCTAGAAAATTGGTTT+TGG - chr1_3:34271909-34271928 Msa0115400:CDS 30.0%
! GAAACCAAAACCAATTTTCT+AGG + chr1_3:34271916-34271935 None:intergenic 30.0%
!! TCTAAATCGCTTTTGAACTA+AGG + chr1_3:34271950-34271969 None:intergenic 30.0%
ATTTAGAGATGCATTACTCA+TGG - chr1_3:34271963-34271982 Msa0115400:CDS 30.0%
! AATGTAATTGTTGATTACCG+TGG - chr1_3:34272009-34272028 Msa0115400:CDS 30.0%
TTGTATTGCATTAATGGTGT+AGG + chr1_3:34272594-34272613 None:intergenic 30.0%
ATCATCATAATAAGAATCGC+CGG + chr1_3:34272670-34272689 None:intergenic 30.0%
TTATGATGATTGTATGACAC+TGG - chr1_3:34272680-34272699 Msa0115400:CDS 30.0%
! CTTATCGTGCTATTAATAAC+TGG - chr1_3:34272871-34272890 Msa0115400:CDS 30.0%
TATTAATTTCTGCAAGGGAT+TGG - chr1_3:34273054-34273073 Msa0115400:CDS 30.0%
ATTAATTTCTGCAAGGGATT+GGG - chr1_3:34273055-34273074 Msa0115400:CDS 30.0%
!! TGTTTTTATGCATAGAAGAG+AGG - chr1_3:34273094-34273113 Msa0115400:CDS 30.0%
CTGTTTATTTGTGTATGTGT+TGG - chr1_3:34273752-34273771 Msa0115400:intron 30.0%
AAATATTATCCAGACTTGGA+CGG + chr1_3:34273932-34273951 None:intergenic 30.0%
CATTGAAGAAATGAGACATT+AGG + chr1_3:34274014-34274033 None:intergenic 30.0%
AAACCTAGGTAAAATTGAAC+AGG + chr1_3:34274052-34274071 None:intergenic 30.0%
ATTGCTACACAAAAAATCTC+AGG + chr1_3:34274365-34274384 None:intergenic 30.0%
TAGTGGCTAATGAAAAATGA+AGG + chr1_3:34274405-34274424 None:intergenic 30.0%
AAACTTTCAATTGTCTCAGA+TGG - chr1_3:34274617-34274636 Msa0115400:intron 30.0%
TTTAACATAAAGCTCCTACT+TGG - chr1_3:34274802-34274821 Msa0115400:CDS 30.0%
! TCCTACTTGGAATTTTATGT+TGG - chr1_3:34274815-34274834 Msa0115400:CDS 30.0%
TCCAACATAAAATTCCAAGT+AGG + chr1_3:34274819-34274838 None:intergenic 30.0%
GAGTTTAATCGGAGAAGTAA+AGG + chr1_3:34268767-34268786 None:intergenic 35.0%
! GGAAGTGTAGATGAAATTGT+GGG + chr1_3:34268855-34268874 None:intergenic 35.0%
!! TGTTACTCCAAGCTTGTTTT+TGG + chr1_3:34268895-34268914 None:intergenic 35.0%
GAGATAATCGAAGGAAGTAA+CGG + chr1_3:34268972-34268991 None:intergenic 35.0%
TACTTCCTTCGATTATCTCA+TGG - chr1_3:34268973-34268992 Msa0115400:three_prime_UTR 35.0%
TTTCTCCATGAGATAATCGA+AGG + chr1_3:34268981-34269000 None:intergenic 35.0%
!! CAAGTTGTTGGTAATGTTGA+TGG - chr1_3:34269067-34269086 Msa0115400:CDS 35.0%
GAAGTTATTGCTGTAGTTAC+TGG - chr1_3:34269124-34269143 Msa0115400:CDS 35.0%
!!! ATTGCTGTAGTTACTGGTTT+TGG - chr1_3:34269130-34269149 Msa0115400:CDS 35.0%
! TTTTGGTCATGACTCATGAT+TGG - chr1_3:34269158-34269177 Msa0115400:CDS 35.0%
TTTGGTCATGACTCATGATT+GGG - chr1_3:34269159-34269178 Msa0115400:CDS 35.0%
! TTCGATGACAATGATGATGA+AGG - chr1_3:34269205-34269224 Msa0115400:CDS 35.0%
! TCTGGCTAAAAGTAAGTTGA+AGG - chr1_3:34269329-34269348 Msa0115400:intron 35.0%
GGAGCCAAAATTAATTTAGG+AGG + chr1_3:34269525-34269544 None:intergenic 35.0%
GGAGGAGCCAAAATTAATTT+AGG + chr1_3:34269528-34269547 None:intergenic 35.0%
CTGTAGCTTACGAAAAAAAC+AGG + chr1_3:34269799-34269818 None:intergenic 35.0%
!!! GTTTTTTTCGTAAGCTACAG+TGG - chr1_3:34269799-34269818 Msa0115400:intron 35.0%
CCATAAACTTATGGTCTCTT+TGG + chr1_3:34269934-34269953 None:intergenic 35.0%
CCAAAGAGACCATAAGTTTA+TGG - chr1_3:34269931-34269950 Msa0115400:intron 35.0%
AAGAGACCATAAGTTTATGG+TGG - chr1_3:34269934-34269953 Msa0115400:intron 35.0%
ACTGAACCACCATAAACTTA+TGG + chr1_3:34269943-34269962 None:intergenic 35.0%
!! AAAAGCTTTTTCCTCTGAAG+AGG + chr1_3:34270447-34270466 None:intergenic 35.0%
TCTCAAAGAAAACAATGGAG+GGG + chr1_3:34270547-34270566 None:intergenic 35.0%
CTCTCAAAGAAAACAATGGA+GGG + chr1_3:34270548-34270567 None:intergenic 35.0%
TCTCTCAAAGAAAACAATGG+AGG + chr1_3:34270549-34270568 None:intergenic 35.0%
!! AGCAAATTTAGTGTTGGTGA+AGG - chr1_3:34270584-34270603 Msa0115400:CDS 35.0%
! CGAAAGTAAGATTTCTGAAG+TGG - chr1_3:34270615-34270634 Msa0115400:CDS 35.0%
!! AACCTTTGCAGTTGATTTGT+TGG - chr1_3:34270789-34270808 Msa0115400:CDS 35.0%
CTAAATAAGTACATAGGAGG+CGG + chr1_3:34270938-34270957 None:intergenic 35.0%
AGGCTAAATAAGTACATAGG+AGG + chr1_3:34270941-34270960 None:intergenic 35.0%
! ACATTTTCTTCTCATGTACG+GGG - chr1_3:34270962-34270981 Msa0115400:CDS 35.0%
TTAGCTGCATTTCTTTCAGA+TGG - chr1_3:34271019-34271038 Msa0115400:CDS 35.0%
AGCTTCCATCAATTGAAACT+TGG - chr1_3:34271059-34271078 Msa0115400:CDS 35.0%
GCTTCCATCAATTGAAACTT+GGG - chr1_3:34271060-34271079 Msa0115400:CDS 35.0%
TCTTCCCAAGTTTCAATTGA+TGG + chr1_3:34271067-34271086 None:intergenic 35.0%
AAACACTGTTTCAGTATGAG+AGG + chr1_3:34271119-34271138 None:intergenic 35.0%
TCTCATACTGAAACAGTGTT+TGG - chr1_3:34271118-34271137 Msa0115400:CDS 35.0%
GATCCACATTACATCTTGTA+TGG - chr1_3:34271140-34271159 Msa0115400:CDS 35.0%
CTGTTATCTGTTTCCCATTA+TGG - chr1_3:34271178-34271197 Msa0115400:CDS 35.0%
ATTCCAAAGCTCACTAAATG+AGG - chr1_3:34271222-34271241 Msa0115400:CDS 35.0%
TTCCAAAGCTCACTAAATGA+GGG - chr1_3:34271223-34271242 Msa0115400:CDS 35.0%
AATAGAATTGGAATGTTCCG+AGG - chr1_3:34271273-34271292 Msa0115400:CDS 35.0%
!! ACACTTGAAGAGCTTGTTAT+TGG - chr1_3:34271355-34271374 Msa0115400:CDS 35.0%
GAATATTTACTGGCAGGATT+TGG + chr1_3:34271388-34271407 None:intergenic 35.0%
TATGCAGAATATTTACTGGC+AGG + chr1_3:34271394-34271413 None:intergenic 35.0%
! GCATATATGCAGTTTTCTGA+TGG - chr1_3:34271409-34271428 Msa0115400:CDS 35.0%
TTATCGAAAATTGTCACTGG+TGG - chr1_3:34271448-34271467 Msa0115400:CDS 35.0%
TACATACATATATGGGAGAG+AGG - chr1_3:34271808-34271827 Msa0115400:CDS 35.0%
CCACTATACTACAAACTACT+CGG - chr1_3:34271869-34271888 Msa0115400:CDS 35.0%
CACTATACTACAAACTACTC+GGG - chr1_3:34271870-34271889 Msa0115400:CDS 35.0%
ACTATACTACAAACTACTCG+GGG - chr1_3:34271871-34271890 Msa0115400:CDS 35.0%
! TAATTGTTGATTACCGTGGT+TGG - chr1_3:34272013-34272032 Msa0115400:CDS 35.0%
! AGTCAGCTTTTGAATTTGTC+AGG - chr1_3:34272049-34272068 Msa0115400:CDS 35.0%
! TGAAGAAACCTTGTTGTCTA+CGG + chr1_3:34272220-34272239 None:intergenic 35.0%
CAAGGTTTCTTCAATTCTGA+TGG - chr1_3:34272227-34272246 Msa0115400:CDS 35.0%
! GTCTTCAAGTGCTTTTCTTA+TGG + chr1_3:34272253-34272272 None:intergenic 35.0%
! AAAGCATCTTCAAGTAATGG+AGG + chr1_3:34272336-34272355 None:intergenic 35.0%
!! AAGCTTTGAAACATCTGTTG+TGG - chr1_3:34272436-34272455 Msa0115400:CDS 35.0%
! TTTGAAACATCTGTTGTGGT+TGG - chr1_3:34272440-34272459 Msa0115400:CDS 35.0%
! TTTAAAACTCACCGCTATTG+TGG - chr1_3:34272506-34272525 Msa0115400:CDS 35.0%
TGCAATACAATATCGACCTT+AGG - chr1_3:34272604-34272623 Msa0115400:CDS 35.0%
TTACTTGTCCTGTTTCAATC+TGG - chr1_3:34272833-34272852 Msa0115400:CDS 35.0%
! GTGCTATTAATAACTGGAGT+GGG - chr1_3:34272877-34272896 Msa0115400:CDS 35.0%
TGCTATTAATAACTGGAGTG+GGG - chr1_3:34272878-34272897 Msa0115400:CDS 35.0%
ATTCATCCTTTCCCAGATTA+AGG + chr1_3:34272923-34272942 None:intergenic 35.0%
TAGAAGAGAGGACTTAGTTA+AGG - chr1_3:34273106-34273125 Msa0115400:CDS 35.0%
CACACTTACCAATGAATATG+AGG - chr1_3:34273160-34273179 Msa0115400:CDS 35.0%
CTTACCAATGAATATGAGGA+AGG - chr1_3:34273164-34273183 Msa0115400:CDS 35.0%
TAAGCCTTCCTCATATTCAT+TGG + chr1_3:34273171-34273190 None:intergenic 35.0%
TTTGTCGAACAGCTAAGTAA+CGG + chr1_3:34273217-34273236 None:intergenic 35.0%
TAGCAATGTATATGGGATCA+AGG + chr1_3:34273370-34273389 None:intergenic 35.0%
TCCTCAGAGTCAAAGAAAAT+CGG + chr1_3:34273448-34273467 None:intergenic 35.0%
!! ATTTTCTTTGACTCTGAGGA+TGG - chr1_3:34273448-34273467 Msa0115400:CDS 35.0%
AGATTATGGAAATACCACTG+TGG + chr1_3:34273515-34273534 None:intergenic 35.0%
TAACAATGGGGACAATTCAA+AGG + chr1_3:34273644-34273663 None:intergenic 35.0%
AACCACTAGGTTGTAACAAT+GGG + chr1_3:34273657-34273676 None:intergenic 35.0%
AAACCACTAGGTTGTAACAA+TGG + chr1_3:34273658-34273677 None:intergenic 35.0%
ATTGTTACAACCTAGTGGTT+TGG - chr1_3:34273657-34273676 Msa0115400:intron 35.0%
CAAATAAACAGACACACACA+AGG + chr1_3:34273743-34273762 None:intergenic 35.0%
!! ACAATGATTTTTCAATCCCG+AGG + chr1_3:34273849-34273868 None:intergenic 35.0%
ACCATCCTTATTATTTGACC+TGG - chr1_3:34273960-34273979 Msa0115400:intron 35.0%
CCATCCTTATTATTTGACCT+GGG - chr1_3:34273961-34273980 Msa0115400:intron 35.0%
TTGGTTTCCCTTATGATGTT+TGG - chr1_3:34274555-34274574 Msa0115400:intron 35.0%
AGTATGTGCATACTCGTTTA+TGG + chr1_3:34274682-34274701 None:intergenic 35.0%
AAACGAGTATGCACATACTT+TGG - chr1_3:34274683-34274702 Msa0115400:CDS 35.0%
AGCAATATACCCGAAAAGTA+AGG - chr1_3:34274706-34274725 Msa0115400:CDS 35.0%
GCAATATACCCGAAAAGTAA+GGG - chr1_3:34274707-34274726 Msa0115400:CDS 35.0%
!! CATTTCATCCCTTACTTTTC+GGG + chr1_3:34274718-34274737 None:intergenic 35.0%
!! GCATTTCATCCCTTACTTTT+CGG + chr1_3:34274719-34274738 None:intergenic 35.0%
!! ATTACAGTCACAGTTCTGAA+TGG + chr1_3:34274896-34274915 None:intergenic 35.0%
CAGAGTAGCAACAATCAATT+CGG + chr1_3:34274923-34274942 None:intergenic 35.0%
TGCAAGATGAAACAATTGAC+AGG + chr1_3:34274992-34275011 None:intergenic 35.0%
! GAACTTCACGGAAGAGTTTT+AGG + chr1_3:34268745-34268764 None:intergenic 40.0%
GGAGAAGTAAAGGAACTTCA+CGG + chr1_3:34268757-34268776 None:intergenic 40.0%
TTTCGTCGTCGGAGTTTAAT+CGG + chr1_3:34268778-34268797 None:intergenic 40.0%
AGATGAAATTGTGGGAAGAG+AGG + chr1_3:34268847-34268866 None:intergenic 40.0%
! GGGAAGTGTAGATGAAATTG+TGG + chr1_3:34268856-34268875 None:intergenic 40.0%
!!! TACTCCAAGCTTGTTTTTGG+TGG + chr1_3:34268892-34268911 None:intergenic 40.0%
ATCAGGTTCAAGATCAACGA+TGG + chr1_3:34268945-34268964 None:intergenic 40.0%
AAGGAAGTAACGGTATCATC+AGG + chr1_3:34268962-34268981 None:intergenic 40.0%
CTTCTACTTGGAACTTCGAA+CGG - chr1_3:34269007-34269026 Msa0115400:exon 40.0%
TTCTACTTGGAACTTCGAAC+GGG - chr1_3:34269008-34269027 Msa0115400:exon 40.0%
!! GTTGTTGGTAATGTTGATGG+CGG - chr1_3:34269070-34269089 Msa0115400:CDS 40.0%
TGTATTTCGCTTAGTCCTGA+TGG - chr1_3:34269100-34269119 Msa0115400:CDS 40.0%
ACAGCAATAACTTCACCATC+AGG + chr1_3:34269118-34269137 None:intergenic 40.0%
!!! TGTAGTTACTGGTTTTGGTC+AGG - chr1_3:34269135-34269154 Msa0115400:CDS 40.0%
!!! TACTGGTTTTGGTCAGGTTT+TGG - chr1_3:34269141-34269160 Msa0115400:CDS 40.0%
TGAAGGTCATCACGTAAGTA+AGG - chr1_3:34269222-34269241 Msa0115400:CDS 40.0%
TTACACCTTGGTTTCACTTC+CGG + chr1_3:34269549-34269568 None:intergenic 40.0%
! TTTCCCACTTTCGATTCGAT+TGG - chr1_3:34269598-34269617 Msa0115400:intron 40.0%
AAGCCAATCGAATCGAAAGT+GGG + chr1_3:34269604-34269623 None:intergenic 40.0%
AAAGCCAATCGAATCGAAAG+TGG + chr1_3:34269605-34269624 None:intergenic 40.0%
AAACACATGTGAGACTGTTC+AGG + chr1_3:34269881-34269900 None:intergenic 40.0%
GTTTATGGTGGTTCAGTTAC+CGG - chr1_3:34269946-34269965 Msa0115400:intron 40.0%
TTTATGGTGGTTCAGTTACC+GGG - chr1_3:34269947-34269966 Msa0115400:intron 40.0%
GTTCTCTCTTTATGTAGAGC+TGG - chr1_3:34270254-34270273 Msa0115400:intron 40.0%
TGGAGCAACATCCTATATCA+TGG - chr1_3:34270324-34270343 Msa0115400:intron 40.0%
TTTGCTACGATGAGTATGTG+TGG - chr1_3:34270365-34270384 Msa0115400:intron 40.0%
AAGATTTGGGAACGAGATTC+AGG - chr1_3:34270410-34270429 Msa0115400:intron 40.0%
AGATTTGGGAACGAGATTCA+GGG - chr1_3:34270411-34270430 Msa0115400:intron 40.0%
! TCAGAGGAAAAAGCTTTTGC+AGG - chr1_3:34270449-34270468 Msa0115400:intron 40.0%
CTCAAAGAAAACAATGGAGG+GGG + chr1_3:34270546-34270565 None:intergenic 40.0%
ACTTAAAGCAAGACGAAGTC+AGG - chr1_3:34270747-34270766 Msa0115400:CDS 40.0%
GTCCAACAAATCAACTGCAA+AGG + chr1_3:34270794-34270813 None:intergenic 40.0%
!! CAGTTGATTTGTTGGACTCT+TGG - chr1_3:34270797-34270816 Msa0115400:CDS 40.0%
!! TTGATTTGTTGGACTCTTGG+TGG - chr1_3:34270800-34270819 Msa0115400:CDS 40.0%
GGCATTAAGGATAAGGAAAG+TGG + chr1_3:34270917-34270936 None:intergenic 40.0%
! AAATGCAGCTAACTGGTTCT+TGG + chr1_3:34271011-34271030 None:intergenic 40.0%
CTGAAAGAAATGCAGCTAAC+TGG + chr1_3:34271018-34271037 None:intergenic 40.0%
TGAAACTTGGGAAGAACTAG+AGG - chr1_3:34271072-34271091 Msa0115400:CDS 40.0%
GAAACTTGGGAAGAACTAGA+GGG - chr1_3:34271073-34271092 Msa0115400:CDS 40.0%
AAACTTGGGAAGAACTAGAG+GGG - chr1_3:34271074-34271093 Msa0115400:CDS 40.0%
GCTGTGACTGAAACCATAAT+GGG + chr1_3:34271194-34271213 None:intergenic 40.0%
TGCTGTGACTGAAACCATAA+TGG + chr1_3:34271195-34271214 None:intergenic 40.0%
CAATCCTGGAACAATATCCT+CGG + chr1_3:34271293-34271312 None:intergenic 40.0%
!!! CAAAAAGCACTGGTTTTGAC+TGG + chr1_3:34271552-34271571 None:intergenic 40.0%
! CAGTCAAAACCAGTGCTTTT+TGG - chr1_3:34271550-34271569 Msa0115400:CDS 40.0%
!! AAAACCAGTGCTTTTTGGAC+TGG - chr1_3:34271555-34271574 Msa0115400:CDS 40.0%
GGGAGTTAGACTCAAAGTAT+GGG - chr1_3:34271740-34271759 Msa0115400:CDS 40.0%
!! GAGAGAGGTGCTAAAATAGT+TGG - chr1_3:34271823-34271842 Msa0115400:CDS 40.0%
! CCGAGTAGTTTGTAGTATAG+TGG + chr1_3:34271872-34271891 None:intergenic 40.0%
GAGATGCATTACTCATGGTT+AGG - chr1_3:34271968-34271987 Msa0115400:CDS 40.0%
TACTCATGGTTAGGAGACAT+AGG - chr1_3:34271977-34271996 Msa0115400:CDS 40.0%
! AGCTTTTGAATTTGTCAGGC+AGG - chr1_3:34272053-34272072 Msa0115400:CDS 40.0%
ACATTAGCAACCTCTGAACA+GGG + chr1_3:34272168-34272187 None:intergenic 40.0%
AACATTAGCAACCTCTGAAC+AGG + chr1_3:34272169-34272188 None:intergenic 40.0%
GTTGCTAATGTTATGCTAGC+TGG - chr1_3:34272177-34272196 Msa0115400:CDS 40.0%
! TGTTGTCTACGGGGAAATTT+TGG + chr1_3:34272209-34272228 None:intergenic 40.0%
AAATTTCCCCGTAGACAACA+AGG - chr1_3:34272209-34272228 Msa0115400:CDS 40.0%
! AAGAAACCTTGTTGTCTACG+GGG + chr1_3:34272218-34272237 None:intergenic 40.0%
! GAAGAAACCTTGTTGTCTAC+GGG + chr1_3:34272219-34272238 None:intergenic 40.0%
TAGCAGGGCTTTCTGTAAAA+TGG + chr1_3:34272275-34272294 None:intergenic 40.0%
! ATTTTACAGAAAGCCCTGCT+AGG - chr1_3:34272274-34272293 Msa0115400:CDS 40.0%
! TTTTACAGAAAGCCCTGCTA+GGG - chr1_3:34272275-34272294 Msa0115400:CDS 40.0%
GCATATTAACCACACTTGCT+CGG - chr1_3:34272304-34272323 Msa0115400:CDS 40.0%
! CATGAGACAACTCCTTTTCA+CGG + chr1_3:34272377-34272396 None:intergenic 40.0%
TCAAAGCTTCTTCAGCAGAA+GGG + chr1_3:34272425-34272444 None:intergenic 40.0%
TTCAAAGCTTCTTCAGCAGA+AGG + chr1_3:34272426-34272445 None:intergenic 40.0%
TCTTCCTTTCTTGCAAGAGT+TGG - chr1_3:34272560-34272579 Msa0115400:CDS 40.0%
ATATCGACCTTAGGCTGAAA+AGG - chr1_3:34272613-34272632 Msa0115400:CDS 40.0%
! TTTCGAACCTTTTCAGCCTA+AGG + chr1_3:34272623-34272642 None:intergenic 40.0%
TAGGCTGAAAAGGTTCGAAA+AGG - chr1_3:34272623-34272642 Msa0115400:CDS 40.0%
! TTTTTACTGACCCTGCTAAG+AGG - chr1_3:34272742-34272761 Msa0115400:CDS 40.0%
GTCCTGTTTCAATCTGGATA+AGG - chr1_3:34272839-34272858 Msa0115400:CDS 40.0%
! AGCCTTATCCAGATTGAAAC+AGG + chr1_3:34272844-34272863 None:intergenic 40.0%
! CGTGCTATTAATAACTGGAG+TGG - chr1_3:34272876-34272895 Msa0115400:CDS 40.0%
GATGAATTACTGCATCTTGC+CGG - chr1_3:34272936-34272955 Msa0115400:CDS 40.0%
! ACAGTAATCCAGGGCAATTT+TGG + chr1_3:34273009-34273028 None:intergenic 40.0%
AAAATTGCCCTGGATTACTG+TGG - chr1_3:34273008-34273027 Msa0115400:CDS 40.0%
AACATCTCCACAGTAATCCA+GGG + chr1_3:34273018-34273037 None:intergenic 40.0%
TAACATCTCCACAGTAATCC+AGG + chr1_3:34273019-34273038 None:intergenic 40.0%
TACTGTGGAGATGTTAACTC+TGG - chr1_3:34273023-34273042 Msa0115400:CDS 40.0%
GGACTTAGTTAAGGTTGTGA+AGG - chr1_3:34273115-34273134 Msa0115400:CDS 40.0%
AGGAAGGCTTAGAGAAAGTA+GGG - chr1_3:34273180-34273199 Msa0115400:CDS 40.0%
!! AGAGAAAGTAGGGAAGTACT+TGG - chr1_3:34273190-34273209 Msa0115400:CDS 40.0%
TTGTCGAACAGCTAAGTAAC+GGG + chr1_3:34273216-34273235 None:intergenic 40.0%
ACTTAGCTGTTCGACAAAGA+AGG - chr1_3:34273219-34273238 Msa0115400:CDS 40.0%
TACCTTCACGTTTCTCTGAT+TGG + chr1_3:34273265-34273284 None:intergenic 40.0%
! GAGGCTAGCAGTAATTTTAG+TGG - chr1_3:34273311-34273330 Msa0115400:CDS 40.0%
AAGGAAAATTACGTACCCTG+TGG + chr1_3:34273351-34273370 None:intergenic 40.0%
!! ACCGATTTTCTTTGACTCTG+AGG - chr1_3:34273444-34273463 Msa0115400:CDS 40.0%
ACCACTAGGTTGTAACAATG+GGG + chr1_3:34273656-34273675 None:intergenic 40.0%
!! GATTTTTCAATCCCGAGGTA+GGG + chr1_3:34273844-34273863 None:intergenic 40.0%
!! TGATTTTTCAATCCCGAGGT+AGG + chr1_3:34273845-34273864 None:intergenic 40.0%
CCCAGGTCAAATAATAAGGA+TGG + chr1_3:34273964-34273983 None:intergenic 40.0%
TCCTTATTATTTGACCTGGG+TGG - chr1_3:34273964-34273983 Msa0115400:intron 40.0%
CAACTCATTTGTGGACACAA+TGG + chr1_3:34273990-34274009 None:intergenic 40.0%
CATTGTGTCCACAAATGAGT+TGG - chr1_3:34273988-34274007 Msa0115400:intron 40.0%
ACATTAGGCCAACTCATTTG+TGG + chr1_3:34273999-34274018 None:intergenic 40.0%
CCTAGGTAAAATTGAACAGG+AGG + chr1_3:34274049-34274068 None:intergenic 40.0%
! CCTCCTGTTCAATTTTACCT+AGG - chr1_3:34274046-34274065 Msa0115400:intron 40.0%
TTGATTTCATCAACAGGACC+AGG - chr1_3:34274238-34274257 Msa0115400:intron 40.0%
AAAAGAGGAAAAATCCGTCC+TGG - chr1_3:34274327-34274346 Msa0115400:intron 40.0%
AAAGAGGAAAAATCCGTCCT+GGG - chr1_3:34274328-34274347 Msa0115400:intron 40.0%
!!! ACTATTTTGCAGTGCTGATG+AGG - chr1_3:34274461-34274480 Msa0115400:intron 40.0%
ACGAGAGCTGAAATCTTTGT+TGG - chr1_3:34274536-34274555 Msa0115400:intron 40.0%
! TTCCCTTATGATGTTTGGTG+AGG - chr1_3:34274560-34274579 Msa0115400:intron 40.0%
! TCCCTTATGATGTTTGGTGA+GGG - chr1_3:34274561-34274580 Msa0115400:intron 40.0%
ACCCTCACCAAACATCATAA+GGG + chr1_3:34274565-34274584 None:intergenic 40.0%
GGATGAAATGCATGATTCAG+AGG - chr1_3:34274728-34274747 Msa0115400:CDS 40.0%
ACATTCATCAATCTGCATGC+AGG + chr1_3:34274846-34274865 None:intergenic 40.0%
GCATGCAGATTGATGAATGT+TGG - chr1_3:34274846-34274865 Msa0115400:CDS 40.0%
! AATGTTGGCCTCTTCATTTG+AGG - chr1_3:34274861-34274880 Msa0115400:CDS 40.0%
! ATGTTGGCCTCTTCATTTGA+GGG - chr1_3:34274862-34274881 Msa0115400:CDS 40.0%
AGTAGCAACAATCAATTCGG+CGG + chr1_3:34274920-34274939 None:intergenic 40.0%
!! TGAAATGAAAGTACTGCCCA+AGG - chr1_3:34274941-34274960 Msa0115400:CDS 40.0%
GAATCGGAAAGTTTCGTCGT+CGG + chr1_3:34268789-34268808 None:intergenic 45.0%
TTGGTGGAAGGAAGAGAGAT+GGG + chr1_3:34268876-34268895 None:intergenic 45.0%
TTTGGTGGAAGGAAGAGAGA+TGG + chr1_3:34268877-34268896 None:intergenic 45.0%
!!! CCAAGCTTGTTTTTGGTGGA+AGG + chr1_3:34268888-34268907 None:intergenic 45.0%
CCTTCCACCAAAAACAAGCT+TGG - chr1_3:34268885-34268904 Msa0115400:three_prime_UTR 45.0%
!! GAGAAAGAAGCGCTTCTACT+TGG - chr1_3:34268995-34269014 Msa0115400:three_prime_UTR 45.0%
!! CTACAGTGGAGTACTGCTTA+TGG - chr1_3:34269813-34269832 Msa0115400:intron 45.0%
CAACATCCTATATCATGGCG+AGG - chr1_3:34270329-34270348 Msa0115400:intron 45.0%
GATTTGGGAACGAGATTCAG+GGG - chr1_3:34270412-34270431 Msa0115400:intron 45.0%
! AGCTTTTGCAGGAGCAGTTT+TGG - chr1_3:34270460-34270479 Msa0115400:intron 45.0%
!! GCTGCAATTTTAGCACCACT+GGG + chr1_3:34270494-34270513 None:intergenic 45.0%
!! AGCTGCAATTTTAGCACCAC+TGG + chr1_3:34270495-34270514 None:intergenic 45.0%
! TGCAGTTCTGATCTTCTTGC+TGG - chr1_3:34270641-34270660 Msa0115400:CDS 45.0%
AAGACGAAGTCAGGTTCATG+TGG - chr1_3:34270756-34270775 Msa0115400:CDS 45.0%
TTCTTCTCATGTACGGGGTA+TGG - chr1_3:34270967-34270986 Msa0115400:CDS 45.0%
CACCCTCATTTAGTGAGCTT+TGG + chr1_3:34271228-34271247 None:intergenic 45.0%
ACTTCGAGGCTTCTATTTGC+AGG - chr1_3:34271249-34271268 Msa0115400:CDS 45.0%
TGTTCCGAGGATATTGTTCC+AGG - chr1_3:34271286-34271305 Msa0115400:CDS 45.0%
GATTGCTGACATGTTCAGGT+TGG - chr1_3:34271308-34271327 Msa0115400:CDS 45.0%
TCGAAAATTGTCACTGGTGG+CGG - chr1_3:34271451-34271470 Msa0115400:CDS 45.0%
!! CTTTTTGGACTGGACGAGAT+TGG - chr1_3:34271565-34271584 Msa0115400:CDS 45.0%
ATTGGCAGATTGCATGCTAG+CGG - chr1_3:34271583-34271602 Msa0115400:CDS 45.0%
GGGGAGTTAGACTCAAAGTA+TGG - chr1_3:34271739-34271758 Msa0115400:CDS 45.0%
TCCGCAGTAACAGCAGAAAA+AGG - chr1_3:34271770-34271789 Msa0115400:CDS 45.0%
! CCCTTTTTCTGCTGTTACTG+CGG + chr1_3:34271774-34271793 None:intergenic 45.0%
CCGCAGTAACAGCAGAAAAA+GGG - chr1_3:34271771-34271790 Msa0115400:CDS 45.0%
CTGAAAAAGCTTGCCAACCA+CGG + chr1_3:34272029-34272048 None:intergenic 45.0%
TGTCAGGCAGGTCAACAATT+TGG - chr1_3:34272065-34272084 Msa0115400:CDS 45.0%
GTCAGGCAGGTCAACAATTT+GGG - chr1_3:34272066-34272085 Msa0115400:CDS 45.0%
GCTAATGTTATGCTAGCTGG+AGG - chr1_3:34272180-34272199 Msa0115400:CDS 45.0%
! TGTCTACGGGGAAATTTTGG+AGG + chr1_3:34272206-34272225 None:intergenic 45.0%
ATATGCAAAGCTCCCTAGCA+GGG + chr1_3:34272290-34272309 None:intergenic 45.0%
AATATGCAAAGCTCCCTAGC+AGG + chr1_3:34272291-34272310 None:intergenic 45.0%
TGTCTCATGCTGATGATCAC+AGG - chr1_3:34272388-34272407 Msa0115400:CDS 45.0%
ATCATAGACAGCATCCCCAT+CGG + chr1_3:34272466-34272485 None:intergenic 45.0%
! TGCTGTCTATGATGCTGCTT+TGG - chr1_3:34272473-34272492 Msa0115400:CDS 45.0%
!! GCTGTCTATGATGCTGCTTT+GGG - chr1_3:34272474-34272493 Msa0115400:CDS 45.0%
GGCATTCAATGCCACAATAG+CGG + chr1_3:34272520-34272539 None:intergenic 45.0%
CTCAGACATATTGCTTCTGC+CGG - chr1_3:34272648-34272667 Msa0115400:CDS 45.0%
TAAGAGGATGCCATTCCTTG+AGG - chr1_3:34272758-34272777 Msa0115400:CDS 45.0%
GCATGGGGTGATTATCTTAG+CGG - chr1_3:34272780-34272799 Msa0115400:CDS 45.0%
AGTTGCTGGGTTCCTTAATC+TGG - chr1_3:34272908-34272927 Msa0115400:CDS 45.0%
GTTGCTGGGTTCCTTAATCT+GGG - chr1_3:34272909-34272928 Msa0115400:CDS 45.0%
TGGGTTCCTTAATCTGGGAA+AGG - chr1_3:34272914-34272933 Msa0115400:CDS 45.0%
AAGTTCTTCGCAAAGCTCAC+CGG + chr1_3:34272958-34272977 None:intergenic 45.0%
TGCGAAGAACTTCAAGCACT+TGG - chr1_3:34272966-34272985 Msa0115400:CDS 45.0%
AATTTCTGCAAGGGATTGGG+AGG - chr1_3:34273058-34273077 Msa0115400:CDS 45.0%
GAGGAAGGCTTAGAGAAAGT+AGG - chr1_3:34273179-34273198 Msa0115400:CDS 45.0%
CTCCAATCAGAGAAACGTGA+AGG - chr1_3:34273260-34273279 Msa0115400:CDS 45.0%
! TGAAGATGATGCTGCTTCAG+AGG - chr1_3:34273292-34273311 Msa0115400:CDS 45.0%
GAATGAGTGCATACACCACA+GGG - chr1_3:34273333-34273352 Msa0115400:CDS 45.0%
AACAAAACTGAGAGCCACAG+TGG - chr1_3:34273498-34273517 Msa0115400:intron 45.0%
TCCCCATTGTTACAACCTAG+TGG - chr1_3:34273652-34273671 Msa0115400:intron 45.0%
!! AACCTAGTGGTTTGGTTGTG+AGG - chr1_3:34273665-34273684 Msa0115400:intron 45.0%
! GGTTGTGAGGACATTTTGTG+TGG - chr1_3:34273678-34273697 Msa0115400:intron 45.0%
AACAGACACACACAAGGAGA+GGG + chr1_3:34273737-34273756 None:intergenic 45.0%
AAACAGACACACACAAGGAG+AGG + chr1_3:34273738-34273757 None:intergenic 45.0%
AAGTTTGACACTCCCTACCT+CGG - chr1_3:34273829-34273848 Msa0115400:intron 45.0%
GCCACCCAGGTCAAATAATA+AGG + chr1_3:34273968-34273987 None:intergenic 45.0%
! AGAAGCAGCAGAACTTTTCC+TGG + chr1_3:34274259-34274278 None:intergenic 45.0%
TCTTTCAGCTGCAACTACCA+GGG - chr1_3:34274281-34274300 Msa0115400:intron 45.0%
! AAATGAAGGTGCACAGAGCA+GGG + chr1_3:34274391-34274410 None:intergenic 45.0%
! AAAATGAAGGTGCACAGAGC+AGG + chr1_3:34274392-34274411 None:intergenic 45.0%
! GCGTTGGTGGATCATTTGAA+AGG - chr1_3:34274489-34274508 Msa0115400:intron 45.0%
! GAAAGGCATGTCTATGAGAG+TGG - chr1_3:34274506-34274525 Msa0115400:intron 45.0%
CACCCTCACCAAACATCATA+AGG + chr1_3:34274566-34274585 None:intergenic 45.0%
TGCAAGGAAGCTACAGCAAA+TGG - chr1_3:34274590-34274609 Msa0115400:intron 45.0%
GCAAGGAAGCTACAGCAAAT+GGG - chr1_3:34274591-34274610 Msa0115400:intron 45.0%
CAAGGAAGCTACAGCAAATG+GGG - chr1_3:34274592-34274611 Msa0115400:intron 45.0%
AAGGAAGCTACAGCAAATGG+GGG - chr1_3:34274593-34274612 Msa0115400:intron 45.0%
! ATGATTCAGAGGCTTTGTCG+TGG - chr1_3:34274739-34274758 Msa0115400:CDS 45.0%
! TGTTGGCCTCTTCATTTGAG+GGG - chr1_3:34274863-34274882 Msa0115400:CDS 45.0%
ACCCTAATGTCACTCTCCTT+GGG + chr1_3:34274960-34274979 None:intergenic 45.0%
AACCCTAATGTCACTCTCCT+TGG + chr1_3:34274961-34274980 None:intergenic 45.0%
! CGATGTCTAAGGCGGAGAAT+CGG + chr1_3:34268805-34268824 None:intergenic 50.0%
GTTGCGTTCGATGTCTAAGG+CGG + chr1_3:34268813-34268832 None:intergenic 50.0%
ACGGTTGCGTTCGATGTCTA+AGG + chr1_3:34268816-34268835 None:intergenic 50.0%
GGGAAGAGAGGAAGAAGAGA+CGG + chr1_3:34268835-34268854 None:intergenic 50.0%
! GCGAACGTGACTCAAGTTGT+TGG - chr1_3:34269055-34269074 Msa0115400:CDS 50.0%
CCATCTCCTCGCCATGATAT+AGG + chr1_3:34270338-34270357 None:intergenic 50.0%
CCTATATCATGGCGAGGAGA+TGG - chr1_3:34270335-34270354 Msa0115400:intron 50.0%
GGCATTACTTGCCTCTTCAG+AGG - chr1_3:34270433-34270452 Msa0115400:intron 50.0%
!!! TTGCAGGAGCAGTTTTGGAG+TGG - chr1_3:34270465-34270484 Msa0115400:CDS 50.0%
! TTGTTGGACTCTTGGTGGTC+AGG - chr1_3:34270805-34270824 Msa0115400:CDS 50.0%
TCCGTTGCACTAGTCATCGA+TGG - chr1_3:34270872-34270891 Msa0115400:CDS 50.0%
GCCATCGATGACTAGTGCAA+CGG + chr1_3:34270876-34270895 None:intergenic 50.0%
AGGAGGCGGCATTAAGGATA+AGG + chr1_3:34270924-34270943 None:intergenic 50.0%
GTACATAGGAGGCGGCATTA+AGG + chr1_3:34270930-34270949 None:intergenic 50.0%
! CTAAATGAGGGTGCACTTCG+AGG - chr1_3:34271235-34271254 Msa0115400:CDS 50.0%
CCTGAACATGTCAGCAATCC+TGG + chr1_3:34271307-34271326 None:intergenic 50.0%
CCAGGATTGCTGACATGTTC+AGG - chr1_3:34271304-34271323 Msa0115400:CDS 50.0%
! TCGTCCAGTCCAAAAAGCAC+TGG + chr1_3:34271562-34271581 None:intergenic 50.0%
TTGGCAGATTGCATGCTAGC+GGG - chr1_3:34271584-34271603 Msa0115400:CDS 50.0%
AGCAACCTCTGAACAGGGAA+CGG + chr1_3:34272163-34272182 None:intergenic 50.0%
AGCTTCTTCAGCAGAAGGGT+AGG + chr1_3:34272421-34272440 None:intergenic 50.0%
! ATCTGTTGTGGTTGGCCGAT+GGG - chr1_3:34272448-34272467 Msa0115400:CDS 50.0%
CGCTCCAACTCTTGCAAGAA+AGG + chr1_3:34272567-34272586 None:intergenic 50.0%
GGAATGGCATCCTCTTAGCA+GGG + chr1_3:34272755-34272774 None:intergenic 50.0%
AGGAATGGCATCCTCTTAGC+AGG + chr1_3:34272756-34272775 None:intergenic 50.0%
GATGCCATTCCTTGAGGCAT+GGG - chr1_3:34272764-34272783 Msa0115400:CDS 50.0%
ATGCCATTCCTTGAGGCATG+GGG - chr1_3:34272765-34272784 Msa0115400:CDS 50.0%
GATAATCACCCCATGCCTCA+AGG + chr1_3:34272776-34272795 None:intergenic 50.0%
CTTCAAGCACTTGGTAAGCC+TGG - chr1_3:34272975-34272994 Msa0115400:CDS 50.0%
!! GCAATTTTGGCAGCTTCACC+AGG + chr1_3:34272996-34273015 None:intergenic 50.0%
TGAAGCTGCCAAAATTGCCC+TGG - chr1_3:34272998-34273017 Msa0115400:CDS 50.0%
GGAATGAGTGCATACACCAC+AGG - chr1_3:34273332-34273351 Msa0115400:CDS 50.0%
! TTGACTCTGAGGATGGACTC+CGG - chr1_3:34273455-34273474 Msa0115400:CDS 50.0%
GTCCTCACAACCAAACCACT+AGG + chr1_3:34273670-34273689 None:intergenic 50.0%
GTGAACTGGGTTCGAACTCA+GGG + chr1_3:34273706-34273725 None:intergenic 50.0%
ACAGACACACACAAGGAGAG+GGG + chr1_3:34273736-34273755 None:intergenic 50.0%
AGTTTGACACTCCCTACCTC+GGG - chr1_3:34273830-34273849 Msa0115400:intron 50.0%
CTCTTTCAGCTGCAACTACC+AGG - chr1_3:34274280-34274299 Msa0115400:intron 50.0%
TGCTGATGAGGAGTTTGCGT+TGG - chr1_3:34274473-34274492 Msa0115400:intron 50.0%
TGATGAGGAGTTTGCGTTGG+TGG - chr1_3:34274476-34274495 Msa0115400:intron 50.0%
TTGGTGAGGGTGAAACTGCA+AGG - chr1_3:34274574-34274593 Msa0115400:intron 50.0%
! ATTCAGAGGCTTTGTCGTGG+CGG - chr1_3:34274742-34274761 Msa0115400:CDS 50.0%
TTCGAGCCCCTCAAATGAAG+AGG + chr1_3:34274872-34274891 None:intergenic 50.0%
TGCCCAAGGAGAGTGACATT+AGG - chr1_3:34274955-34274974 Msa0115400:CDS 50.0%
GCCCAAGGAGAGTGACATTA+GGG - chr1_3:34274956-34274975 Msa0115400:CDS 50.0%
CTCCTCCGGAAGTGAAACCA+AGG - chr1_3:34269541-34269560 Msa0115400:CDS 55.0%
CACCTTGGTTTCACTTCCGG+AGG + chr1_3:34269546-34269565 None:intergenic 55.0%
!!! GTTTTGGAGTGGATGCCCAG+TGG - chr1_3:34270476-34270495 Msa0115400:CDS 55.0%
!! TGTCACTGGTGGCGGATCTT+TGG - chr1_3:34271459-34271478 Msa0115400:CDS 55.0%
! GTTTTTCTGCAGCCTGCCCT+CGG - chr1_3:34271497-34271516 Msa0115400:CDS 55.0%
CCAACGCTACATCCATCCGA+GGG + chr1_3:34271516-34271535 None:intergenic 55.0%
ACCAACGCTACATCCATCCG+AGG + chr1_3:34271517-34271536 None:intergenic 55.0%
!! CGGATGGATGTAGCGTTGGT+CGG - chr1_3:34271517-34271536 Msa0115400:CDS 55.0%
TGGCAGATTGCATGCTAGCG+GGG - chr1_3:34271585-34271604 Msa0115400:CDS 55.0%
TGTGTCCGTTCCCTGTTCAG+AGG - chr1_3:34272155-34272174 Msa0115400:CDS 55.0%
! CATCTGTTGTGGTTGGCCGA+TGG - chr1_3:34272447-34272466 Msa0115400:CDS 55.0%
! TCTGTTGTGGTTGGCCGATG+GGG - chr1_3:34272449-34272468 Msa0115400:CDS 55.0%
GGATGCCATTCCTTGAGGCA+TGG - chr1_3:34272763-34272782 Msa0115400:CDS 55.0%
TCACCCCATGCCTCAAGGAA+TGG + chr1_3:34272771-34272790 None:intergenic 55.0%
! AGTGGGGTGCTTACAGTTGC+TGG - chr1_3:34272894-34272913 Msa0115400:CDS 55.0%
! GTGGGGTGCTTACAGTTGCT+GGG - chr1_3:34272895-34272914 Msa0115400:CDS 55.0%
TTCTGCAAGGGATTGGGAGG+AGG - chr1_3:34273061-34273080 Msa0115400:CDS 55.0%
GGATTGGGAGGAGGCTATGA+GGG - chr1_3:34273070-34273089 Msa0115400:CDS 55.0%
GGTGAACTGGGTTCGAACTC+AGG + chr1_3:34273707-34273726 None:intergenic 55.0%
GAGGGGGAATGTGGTGAACT+GGG + chr1_3:34273719-34273738 None:intergenic 55.0%
AGAGGGGGAATGTGGTGAAC+TGG + chr1_3:34273720-34273739 None:intergenic 55.0%
ACACAAGGAGAGGGGGAATG+TGG + chr1_3:34273728-34273747 None:intergenic 55.0%
CAGACACACACAAGGAGAGG+GGG + chr1_3:34273735-34273754 None:intergenic 55.0%
GTAGCATCTGCTGCCTTTGC+AGG - chr1_3:34273896-34273915 Msa0115400:intron 55.0%
CTACCAGGGCAAGAGATGCT+AGG - chr1_3:34274295-34274314 Msa0115400:intron 55.0%
CAAGAGATGCTAGGCGTCAG+AGG - chr1_3:34274304-34274323 Msa0115400:intron 55.0%
GCTAGGCGTCAGAGGAAAAG+AGG - chr1_3:34274312-34274331 Msa0115400:intron 55.0%
GAGGAAAAATCCGTCCTGGG+AGG - chr1_3:34274331-34274350 Msa0115400:intron 55.0%
GGTCAAGATACCTCCCAGGA+CGG + chr1_3:34274344-34274363 None:intergenic 55.0%
CTCAGGTCAAGATACCTCCC+AGG + chr1_3:34274348-34274367 None:intergenic 55.0%
! GGCAGCAGTCAGATTAGCTG+AGG - chr1_3:34274638-34274657 Msa0115400:intron 55.0%
! TTCAGAGGCTTTGTCGTGGC+GGG - chr1_3:34274743-34274762 Msa0115400:CDS 55.0%
CCCTCGGATGGATGTAGCGT+TGG - chr1_3:34271513-34271532 Msa0115400:CDS 60.0%
!! GTAGCGTTGGTCGGAAGTGC+TGG - chr1_3:34271526-34271545 Msa0115400:CDS 60.0%
GGCAGATTGCATGCTAGCGG+GGG - chr1_3:34271586-34271605 Msa0115400:CDS 60.0%
GCAGATTGCATGCTAGCGGG+GGG - chr1_3:34271587-34271606 Msa0115400:CDS 60.0%
AGGCTCACTCCGAGCAAGTG+TGG + chr1_3:34272316-34272335 None:intergenic 60.0%
GGGATTGGGAGGAGGCTATG+AGG - chr1_3:34273069-34273088 Msa0115400:CDS 60.0%
CTGCCTTTGCAGGCAGAGCT+CGG - chr1_3:34273906-34273925 Msa0115400:intron 60.0%
TGTGGACACAATGGCCACCC+AGG + chr1_3:34273981-34274000 None:intergenic 60.0%
ACGCCTAGCATCTCTTGCCC+TGG + chr1_3:34274301-34274320 None:intergenic 60.0%
TTCTGCAGCCTGCCCTCGGA+TGG - chr1_3:34271501-34271520 Msa0115400:CDS 65.0%
CGCTACATCCATCCGAGGGC+AGG + chr1_3:34271512-34271531 None:intergenic 65.0%
AGAGCTCGGCCGTCCAAGTC+TGG - chr1_3:34273920-34273939 Msa0115400:intron 65.0%
CGGCCGAGCTCTGCCTGCAA+AGG + chr1_3:34273912-34273931 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34268734 34275083 34268734 ID=Msa0115400;Name=Msa0115400
chr1_3 mRNA 34268734 34275083 34268734 ID=Msa0115400-mRNA-1;Parent=Msa0115400;Name=Msa0115400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.75|0.8|1|0.5|0.4|5|260|1291
chr1_3 exon 34268734 34268770 34268734 ID=Msa0115400-mRNA-1:exon:10773;Parent=Msa0115400-mRNA-1
chr1_3 exon 34268803 34269344 34268803 ID=Msa0115400-mRNA-1:exon:10772;Parent=Msa0115400-mRNA-1
chr1_3 exon 34269465 34269563 34269465 ID=Msa0115400-mRNA-1:exon:10771;Parent=Msa0115400-mRNA-1
chr1_3 exon 34270463 34273508 34270463 ID=Msa0115400-mRNA-1:exon:10770;Parent=Msa0115400-mRNA-1
chr1_3 exon 34274672 34275083 34274672 ID=Msa0115400-mRNA-1:exon:10769;Parent=Msa0115400-mRNA-1
chr1_3 CDS 34274672 34275083 34274672 ID=Msa0115400-mRNA-1:cds;Parent=Msa0115400-mRNA-1
chr1_3 CDS 34270463 34273508 34270463 ID=Msa0115400-mRNA-1:cds;Parent=Msa0115400-mRNA-1
chr1_3 CDS 34269465 34269563 34269465 ID=Msa0115400-mRNA-1:cds;Parent=Msa0115400-mRNA-1
chr1_3 CDS 34269026 34269344 34269026 ID=Msa0115400-mRNA-1:cds;Parent=Msa0115400-mRNA-1
chr1_3 three_prime_UTR 34268803 34269025 34268803 ID=Msa0115400-mRNA-1:three_prime_utr;Parent=Msa0115400-mRNA-1
chr1_3 three_prime_UTR 34268734 34268770 34268734 ID=Msa0115400-mRNA-1:three_prime_utr;Parent=Msa0115400-mRNA-1
Gene Sequence

>Msa0115400

ATGAAAAACCTAAAACTCTTCCGTGAAGTTCCTTTACTTCTCCGATTAAACTCCGACGACGAAACTTTCCGATTCTCCGCCTTAGACATCGAACGCAACCGTCTCTTCTTCCTCTCTTCCCACAATTTCATCTACACTTCCCATCTCTCTTCCTTCCACCAAAAACAAGCTTGGAGTAACAACAACTCGTCATTATCTACTACTCATGCCATCGTTGATCTTGAACCTGATGATACCGTTACTTCCTTCGATTATCTCATGGAGAAAGAAGCGCTTCTACTTGGAACTTCGAACGGGCTTTTGTTGCTATTTGATGTTGATGCGAACGTGACTCAAGTTGTTGGTAATGTTGATGGCGGTGTTAATTGTATTTCGCTTAGTCCTGATGGTGAAGTTATTGCTGTAGTTACTGATGGAGAAAACTTTATGGAGCAACATCCTATATCATGGCGAGGAGATGGAAAATACTTTGCTACGATGAGTATGTGTGGTTCTAATTTATCACGGAAACTTAAGATTTGGGAACGAGATTCAGGGGCATTACTTGCCTCTTCAGAGGAAAAAGCTTTTGCAGGAGCAGTTTTGGAGTGGATGCCCAGTGGTGCTAAAATTGCAGCTGTATATGATAGAAAAGCTGAAAATGAATCCCCCTCCATTGTTTTCTTTGAGAGAAATGGATTAGAAAGAAGCAAATTTAGTGTTGGTGAAGGAATTAATGCGAAAGTAAGATTTCTGAAGTGGAATTGCAGTTCTGATCTTCTTGCTGGTGTTGTTGAATGTGAAAATTATGAGGCTCTAAAGATATGGTATTTTAGCAACAATCATTGGTACCTGAAGCATGAAATTAGATACTTAAAGCAAGACGAAGTCAGGTTCATGTGGAATCAAGAAAAACCTTTGCAGTTGATTTGTTGGACTCTTGGTGGTCAGGTTACAGTTTACAATTTTGTTTGGATCACGGCTGTTACAGACAATTCCGTTGCACTAGTCATCGATGGCTCCAATATTCATGTAACACCACTTTCCTTATCCTTAATGCCGCCTCCTATGTACTTATTTAGCCTAACATTTTCTTCTCATGTACGGGGTATGGCAGTATACTGTAAAAACTCCAAGAACCAGTTAGCTGCATTTCTTTCAGATGGTAGTTTATGTGTTGTAGAGCTTCCATCAATTGAAACTTGGGAAGAACTAGAGGGGCAAGAATTCAGTGTTGAAGCCTCTCATACTGAAACAGTGTTTGGATCCACATTACATCTTGTATGGTTAGATTCACATACGCTGTTATCTGTTTCCCATTATGGTTTCAGTCACAGCAATGACTTATTCCAAAGCTCACTAAATGAGGGTGCACTTCGAGGCTTCTATTTGCAGGAAATAGAATTGGAATGTTCCGAGGATATTGTTCCAGGATTGCTGACATGTTCAGGTTGGAATGCAACAGTTTCTAAGCAAAATACACTTGAAGAGCTTGTTATTGGCATTGCTCCAAATCCTGCCAGTAAATATTCTGCATATATGCAGTTTTCTGATGGGAAAATAAACGAGTATTTATCGAAAATTGTCACTGGTGGCGGATCTTTGGAACAAGAATATCAAGGTTTTTCTGCAGCCTGCCCTCGGATGGATGTAGCGTTGGTCGGAAGTGCTGGCCAGTCAAAACCAGTGCTTTTTGGACTGGACGAGATTGGCAGATTGCATGCTAGCGGGGGGATAGTAGTTTGCAACAACTGCAGCAGTTTCTCATTTTACTCGAATTTGGCAGATCAAGTTGTGACACATCTAATTCTTGCAACTAAACAAGATCTGCTTTTTATTGTTGACATTGTCGATATATTTAATGGGGAGTTAGACTCAAAGTATGGGAATTTTGTCCGCAGTAACAGCAGAAAAAGGGAAGAAAATGAAAATTACATACATATATGGGAGAGAGGTGCTAAAATAGTTGGAGTTTTACATGGAGACGAAGCTGCCACTATACTACAAACTACTCGGGGAAACCTAGAATGTATATACCCTAGAAAATTGGTTTTGGTTTCTATCATTAATGCCTTAGTTCAAAAGCGATTTAGAGATGCATTACTCATGGTTAGGAGACATAGGATAGATTTCAATGTAATTGTTGATTACCGTGGTTGGCAAGCTTTTTCAGAGTCAGCTTTTGAATTTGTCAGGCAGGTCAACAATTTGGGTTACATAACTGAGTTTGTTTGTTCTGTAAAGAATGAAAATGTTATAGAGACACTCTACAAAAATCATGTGTCCGTTCCCTGTTCAGAGGTTGCTAATGTTATGCTAGCTGGAGGCCTCCAAAATTTCCCCGTAGACAACAAGGTTTCTTCAATTCTGATGGCCATAAGAAAAGCACTTGAAGACCATTTTACAGAAAGCCCTGCTAGGGAGCTTTGCATATTAACCACACTTGCTCGGAGTGAGCCTCCATTACTTGAAGATGCTTTAAAGAGAATAAAAGTTATCCGTGAAAAGGAGTTGTCTCATGCTGATGATCACAGGAGAATGACCTACCCTTCTGCTGAAGAAGCTTTGAAACATCTGTTGTGGTTGGCCGATGGGGATGCTGTCTATGATGCTGCTTTGGGTCTTTATGATTTAAAACTCACCGCTATTGTGGCATTGAATGCCCAAAAAGATCCAAAAGAATTTCTTCCTTTCTTGCAAGAGTTGGAGCGTATGCCTACACCATTAATGCAATACAATATCGACCTTAGGCTGAAAAGGTTCGAAAAGGCTCTCAGACATATTGCTTCTGCCGGCGATTCTTATTATGATGATTGTATGACACTGGTGAAGAAAAACCCTCAACTTTTCCCCTTGTCTCTTCAACTTTTTACTGACCCTGCTAAGAGGATGCCATTCCTTGAGGCATGGGGTGATTATCTTAGCGGTGAAAAATGCTTTGAAGATGCTGCAACAATTTACTTGTCCTGTTTCAATCTGGATAAGGCTCTTAAGTCTTATCGTGCTATTAATAACTGGAGTGGGGTGCTTACAGTTGCTGGGTTCCTTAATCTGGGAAAGGATGAATTACTGCATCTTGCCGGTGAGCTTTGCGAAGAACTTCAAGCACTTGGTAAGCCTGGTGAAGCTGCCAAAATTGCCCTGGATTACTGTGGAGATGTTAACTCTGGTGTAAATTTATTAATTTCTGCAAGGGATTGGGAGGAGGCTATGAGGGTTGTTTTTATGCATAGAAGAGAGGACTTAGTTAAGGTTGTGAAGGATGCATCTGTTGAATGTGCAAGCACACTTACCAATGAATATGAGGAAGGCTTAGAGAAAGTAGGGAAGTACTTGGCCCGTTACTTAGCTGTTCGACAAAGAAGGCTACTTCTCGCAGCAAAGCTCCAATCAGAGAAACGTGAAGGTAGTGATGTTGAAGATGATGCTGCTTCAGAGGCTAGCAGTAATTTTAGTGGAATGAGTGCATACACCACAGGGACCAGGAAAAGTTCTGCTGCTTCTACTCTTTCAGCTGCAACTACCAGGGCAAGAGATGCTAGGCGTCAGAGGAAAAGAGGAAAAATCCGTCCTGGGAGTGCTGATGAGGAGTTTGCGTTGGTGGATCATTTGAAAGGCATGTCTATGAGAGTGGAAGCAAGACGAGAGCTGAAATCTTTGTTGGTTTCCCTTATGATGTTTGGTGAGGGTGAAACTGCAAGGAAGCTACAGCAAATGGGGGAAAACTTTCAATTGTCTCAGATGGCAGCAGTCAGATTAGCTGAGGATACAATATCAAATGATACCATAAACGAGTATGCACATACTTTGGAGCAATATACCCGAAAAGTAAGGGATGAAATGCATGATTCAGAGGCTTTGTCGTGGCGGGTCAAAGTTTTTTTAAGCAACGAGTGA
Protein sequence

>Msa0115400

MKNLKLFREVPLLLRLNSDDETFRFSALDIERNRLFFLSSHNFIYTSHLSSFHQKQAWSNNNSSLSTTHAIVDLEPDDTVTSFDYLMEKEALLLGTSNGLLLLFDVDANVTQVVGNVDGGVNCISLSPDGEVIAVVTDGENFMEQHPISWRGDGKYFATMSMCGSNLSRKLKIWERDSGALLASSEEKAFAGAVLEWMPSGAKIAAVYDRKAENESPSIVFFERNGLERSKFSVGEGINAKVRFLKWNCSSDLLAGVVECENYEALKIWYFSNNHWYLKHEIRYLKQDEVRFMWNQEKPLQLICWTLGGQVTVYNFVWITAVTDNSVALVIDGSNIHVTPLSLSLMPPPMYLFSLTFSSHVRGMAVYCKNSKNQLAAFLSDGSLCVVELPSIETWEELEGQEFSVEASHTETVFGSTLHLVWLDSHTLLSVSHYGFSHSNDLFQSSLNEGALRGFYLQEIELECSEDIVPGLLTCSGWNATVSKQNTLEELVIGIAPNPASKYSAYMQFSDGKINEYLSKIVTGGGSLEQEYQGFSAACPRMDVALVGSAGQSKPVLFGLDEIGRLHASGGIVVCNNCSSFSFYSNLADQVVTHLILATKQDLLFIVDIVDIFNGELDSKYGNFVRSNSRKREENENYIHIWERGAKIVGVLHGDEAATILQTTRGNLECIYPRKLVLVSIINALVQKRFRDALLMVRRHRIDFNVIVDYRGWQAFSESAFEFVRQVNNLGYITEFVCSVKNENVIETLYKNHVSVPCSEVANVMLAGGLQNFPVDNKVSSILMAIRKALEDHFTESPARELCILTTLARSEPPLLEDALKRIKVIREKELSHADDHRRMTYPSAEEALKHLLWLADGDAVYDAALGLYDLKLTAIVALNAQKDPKEFLPFLQELERMPTPLMQYNIDLRLKRFEKALRHIASAGDSYYDDCMTLVKKNPQLFPLSLQLFTDPAKRMPFLEAWGDYLSGEKCFEDAATIYLSCFNLDKALKSYRAINNWSGVLTVAGFLNLGKDELLHLAGELCEELQALGKPGEAAKIALDYCGDVNSGVNLLISARDWEEAMRVVFMHRREDLVKVVKDASVECASTLTNEYEEGLEKVGKYLARYLAVRQRRLLLAAKLQSEKREGSDVEDDAASEASSNFSGMSAYTTGTRKSSAASTLSAATTRARDARRQRKRGKIRPGSADEEFALVDHLKGMSMRVEARRELKSLLVSLMMFGEGETARKLQQMGENFQLSQMAAVRLAEDTISNDTINEYAHTLEQYTRKVRDEMHDSEALSWRVKVFLSNE*