AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959270 MtrunA17_Chr7g0236991 70.324 556 162 1 1 556 1 553 0.0 831
Msa0959270 MtrunA17_Chr7g0237001 70.144 556 163 1 1 556 1 553 0.0 829
Msa0959270 MtrunA17_Chr7g0237041 70.144 556 163 1 1 556 1 553 0.0 829
Msa0959270 MtrunA17_Chr7g0237081 70.144 556 163 1 1 556 1 553 0.0 829
Msa0959270 MtrunA17_Chr7g0237051 70.144 556 163 1 1 556 1 553 0.0 829
Msa0959270 MtrunA17_Chr6g0466051 70.504 556 161 1 1 556 1 553 0.0 825
Msa0959270 MtrunA17_Chr6g0465911 70.324 556 162 1 1 556 1 553 0.0 823
Msa0959270 MtrunA17_Chr5g0425371 69.424 556 167 1 1 556 1 553 0.0 812
Msa0959270 MtrunA17_Chr6g0465441 68.345 556 173 1 1 556 1 553 0.0 802
Msa0959270 MtrunA17_Chr6g0451711 66.607 557 185 1 1 556 1 557 0.0 791
Msa0959270 MtrunA17_Chr3g0105071 66.607 557 185 1 1 556 1 557 0.0 782
Msa0959270 MtrunA17_Chr6g0465851 71.429 518 148 0 39 556 1 518 0.0 779
Msa0959270 MtrunA17_Chr4g0024691 67.031 549 181 0 8 556 13 561 0.0 773
Msa0959270 MtrunA17_Chr3g0082691 66.300 546 183 1 12 556 8 553 0.0 767
Msa0959270 MtrunA17_Chr7g0236961 71.285 498 143 0 59 556 1 498 0.0 761
Msa0959270 MtrunA17_Chr7g0237011 71.285 498 143 0 59 556 1 498 0.0 759
Msa0959270 MtrunA17_Chr5g0431571 67.279 544 177 1 12 554 4 547 0.0 758
Msa0959270 MtrunA17_Chr5g0431651 65.201 546 188 2 13 556 7 552 0.0 744
Msa0959270 MtrunA17_Chr4g0042111 57.630 557 233 2 2 556 7 562 0.0 672
Msa0959270 MtrunA17_Chr7g0236971 70.574 401 118 0 156 556 1 401 0.0 608
Msa0959270 MtrunA17_Chr6g0465981 72.872 376 99 1 1 376 1 373 0.0 570
Msa0959270 MtrunA17_Chr6g0465871 72.872 376 99 1 1 376 1 373 0.0 570
Msa0959270 MtrunA17_Chr6g0466081 72.872 376 99 1 1 376 1 373 0.0 570
Msa0959270 MtrunA17_Chr6g0466111 74.852 338 85 0 39 376 1 338 0.0 526
Msa0959270 MtrunA17_Chr6g0465931 74.556 338 86 0 39 376 1 338 0.0 523
Msa0959270 MtrunA17_Chr2g0319041 45.438 548 291 8 15 556 12 557 6.04e-174 503
Msa0959270 MtrunA17_Chr7g0236951 73.802 313 82 0 59 371 1 313 2.11e-173 493
Msa0959270 MtrunA17_Chr7g0237031 73.802 313 82 0 59 371 1 313 6.57e-173 491
Msa0959270 MtrunA17_Chr8g0336181 45.455 550 292 6 13 556 9 556 1.48e-171 497
Msa0959270 MtrunA17_Chr2g0319051 44.444 513 279 6 48 556 4 514 3.04e-162 472
Msa0959270 MtrunA17_Chr4g0008621 45.500 400 214 4 15 410 19 418 8.42e-123 368
Msa0959270 MtrunA17_Chr6g0466031 65.769 260 89 0 297 556 1 260 1.39e-122 361
Msa0959270 MtrunA17_Chr4g0023911 34.615 546 346 4 13 554 41 579 6.60e-114 350
Msa0959270 MtrunA17_Chr5g0445511 66.109 239 81 0 151 389 1 239 2.77e-113 336
Msa0959270 MtrunA17_Chr2g0319071 36.957 506 269 10 53 554 28 487 5.35e-113 345
Msa0959270 MtrunA17_Chr7g0237061 61.923 260 76 2 297 556 1 237 8.73e-109 325
Msa0959270 MtrunA17_Chr2g0310331 36.900 542 328 9 17 554 53 584 8.40e-107 332
Msa0959270 MtrunA17_Chr2g0323131 35.366 492 299 7 49 534 67 545 2.70e-101 317
Msa0959270 MtrunA17_Chr2g0323151 35.881 471 287 4 68 534 1 460 5.10e-101 313
Msa0959270 MtrunA17_Chr6g0466021 71.078 204 56 1 1 204 1 201 1.70e-100 302
Msa0959270 MtrunA17_Chr7g0237071 71.287 202 58 0 59 260 1 202 7.30e-99 299
Msa0959270 MtrunA17_Chr8g0357411 33.091 550 359 5 7 554 45 587 1.50e-96 305
Msa0959270 MtrunA17_Chr4g0048921 33.719 519 323 9 44 554 64 569 5.50e-89 285
Msa0959270 MtrunA17_Chr7g0237021 69.186 172 53 0 385 556 1 172 1.64e-85 262
Msa0959270 MtrunA17_Chr7g0236941 69.186 172 53 0 385 556 1 172 1.64e-85 262
Msa0959270 MtrunA17_Chr4g0048911 31.015 532 350 9 25 548 34 556 6.90e-83 269
Msa0959270 MtrunA17_Chr6g0465941 65.116 172 60 0 385 556 1 172 9.33e-79 245
Msa0959270 MtrunA17_Chr6g0466121 65.116 172 60 0 385 556 1 172 9.33e-79 245
Msa0959270 MtrunA17_Chr6g0465991 65.116 172 60 0 385 556 1 172 9.33e-79 245
Msa0959270 MtrunA17_Chr6g0466091 65.116 172 60 0 385 556 1 172 9.33e-79 245
Msa0959270 MtrunA17_Chr6g0465881 64.535 172 61 0 385 556 1 172 5.65e-78 243
Msa0959270 MtrunA17_Chr2g0319081 39.157 332 183 7 228 556 112 427 1.36e-76 248
Msa0959270 MtrunA17_Chr2g0319081 39.344 122 73 1 15 135 19 140 1.66e-22 100
Msa0959270 MtrunA17_Chr5g0445501 62.791 172 64 0 385 556 1 172 1.08e-74 234
Msa0959270 MtrunA17_Chr2g0310401 33.333 429 279 6 130 554 5 430 1.98e-72 238
Msa0959270 MtrunA17_Chr2g0280581 28.764 518 344 8 47 547 9 518 5.28e-72 239
Msa0959270 MtrunA17_Chr7g0236921 64.557 158 52 1 403 556 1 158 1.57e-70 223
Msa0959270 MtrunA17_Chr3g0108941 29.389 507 342 9 54 550 13 513 6.90e-70 233
Msa0959270 MtrunA17_Chr3g0105691 29.774 487 335 6 54 534 46 531 2.17e-68 230
Msa0959270 MtrunA17_Chr3g0109001 29.713 488 325 8 54 529 13 494 3.41e-68 229
Msa0959270 MtrunA17_Chr3g0109031 29.485 485 329 8 54 529 13 493 1.22e-67 228
Msa0959270 MtrunA17_Chr3g0109021 29.691 485 328 8 54 529 13 493 6.33e-67 226
Msa0959270 MtrunA17_Chr3g0108981 29.299 471 322 5 68 529 1 469 2.89e-66 223
Msa0959270 MtrunA17_Chr3g0108961 29.299 471 322 5 68 529 1 469 2.89e-66 223
Msa0959270 MtrunA17_Chr6g0477111 29.106 481 329 7 68 539 1 478 7.08e-66 222
Msa0959270 MtrunA17_Chr3g0099031 29.365 504 345 9 54 550 13 512 1.05e-65 222
Msa0959270 MtrunA17_Chr3g0108991 28.986 483 334 8 54 529 13 493 1.58e-64 219
Msa0959270 MtrunA17_Chr3g0108951 28.986 483 334 8 54 529 13 493 1.58e-64 219
Msa0959270 MtrunA17_Chr7g0236931 61.039 154 57 1 403 556 1 151 2.85e-64 206
Msa0959270 MtrunA17_Chr3g0109011 28.662 471 324 7 68 529 1 468 3.88e-63 215
Msa0959270 MtrunA17_Chr3g0108971 28.571 469 327 7 68 529 1 468 7.09e-63 214
Msa0959270 MtrunA17_Chr7g0236981 65.926 135 43 1 1 135 1 132 3.39e-58 190
Msa0959270 MtrunA17_Chr6g0477121 28.642 405 278 6 133 529 10 411 2.92e-55 192
Msa0959270 MtrunA17_Chr7g0233861 62.963 135 41 1 196 330 33 158 2.52e-51 174
Msa0959270 MtrunA17_Chr7g0217361 33.000 300 200 1 255 553 8 307 4.16e-49 172
Msa0959270 MtrunA17_Chr8g0357221 36.145 249 152 3 10 257 48 290 2.94e-41 150
Msa0959270 MtrunA17_Chr5g0445521 65.306 98 34 0 1 98 1 98 8.68e-40 140
Msa0959270 MtrunA17_Chr3g0101681 25.577 520 337 16 70 554 276 780 7.18e-36 143
Msa0959270 MtrunA17_Chr8g0357231 29.457 258 180 2 298 554 1 257 3.40e-34 130
Msa0959270 MtrunA17_Chr2g0310121 23.946 522 343 16 70 554 275 779 1.07e-33 136
Msa0959270 MtrunA17_Chr5g0445401 68.421 95 26 2 166 257 1 94 4.47e-33 121
Msa0959270 MtrunA17_Chr3g0082711 50.000 116 41 1 441 556 1 99 1.44e-32 120
Msa0959270 MtrunA17_Chr7g0259881 26.545 275 170 6 68 313 227 498 1.36e-22 102
Msa0959270 MtrunA17_Chr7g0218001 28.832 274 163 6 68 310 344 616 6.97e-22 100
Msa0959270 MtrunA17_Chr7g0217351 29.032 217 145 5 46 258 62 273 3.81e-20 91.3
Msa0959270 MtrunA17_Chr2g0281651 24.390 328 235 8 214 535 24 344 3.31e-19 90.1
Msa0959270 MtrunA17_Chr2g0310411 31.967 122 75 3 10 131 51 164 2.25e-13 68.6
Msa0959270 MtrunA17_Chr7g0218041 29.958 237 141 6 120 332 3 238 5.54e-13 71.2
Msa0959270 MtrunA17_Chr4g0008631 36.145 83 51 2 475 556 1 82 7.18e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959270 AT5G23960.2 38.869 548 326 5 13 556 3 545 3.57e-145 429
Msa0959270 AT5G23960.1 38.838 551 324 7 13 556 3 547 3.70e-144 427
Msa0959270 AT1G70080.1 36.445 557 344 7 8 556 57 611 7.94e-129 390
Msa0959270 AT3G14490.1 38.026 547 327 7 17 556 60 601 6.82e-128 387
Msa0959270 AT3G14520.1 36.414 541 334 5 22 556 68 604 3.91e-125 380
Msa0959270 AT1G31950.3 36.131 548 327 6 22 556 70 607 6.08e-124 377
Msa0959270 AT1G31950.1 36.414 541 334 5 22 556 70 606 8.06e-124 377
Msa0959270 AT3G14540.1 36.481 540 335 4 22 556 65 601 1.81e-122 373
Msa0959270 AT3G29410.1 35.912 543 342 5 17 556 64 603 4.06e-119 365
Msa0959270 AT3G32030.1 34.630 540 345 6 22 556 68 604 3.61e-116 357
Msa0959270 AT5G44630.1 36.147 545 337 8 18 554 14 555 6.59e-116 355
Msa0959270 AT1G33750.1 34.766 535 343 4 24 556 73 603 8.56e-116 356
Msa0959270 AT4G20210.1 34.307 548 347 7 17 556 58 600 2.91e-115 355
Msa0959270 AT3G29410.2 36.400 500 314 3 59 556 1 498 2.25e-114 349
Msa0959270 AT4G13300.1 35.065 539 339 7 25 556 20 554 9.44e-112 344
Msa0959270 AT4G20200.1 35.328 518 321 8 48 556 92 604 1.50e-111 345
Msa0959270 AT4G15870.1 35.305 541 324 10 25 556 75 598 5.16e-108 336
Msa0959270 AT4G13280.2 34.264 537 342 7 27 556 22 554 1.82e-106 330
Msa0959270 AT1G31950.2 37.149 463 268 6 22 471 70 522 1.10e-105 327
Msa0959270 AT3G29190.1 33.333 522 332 7 45 556 86 601 2.16e-105 329
Msa0959270 AT3G14540.2 37.892 446 270 3 22 463 65 507 4.67e-105 325
Msa0959270 AT3G29110.1 34.743 544 346 8 17 554 55 595 6.81e-103 322
Msa0959270 AT4G20230.1 33.210 539 342 9 25 552 70 601 1.23e-102 322
Msa0959270 AT4G20230.2 33.210 539 342 9 25 552 82 613 1.84e-102 322
Msa0959270 AT2G23230.2 34.066 546 345 9 16 551 55 595 7.77e-102 320
Msa0959270 AT2G23230.1 33.883 546 341 10 16 551 55 590 2.86e-99 313
Msa0959270 AT1G66020.1 32.234 546 361 6 17 556 56 598 1.58e-98 311
Msa0959270 AT1G48800.1 32.418 546 353 9 17 552 63 602 1.63e-97 308
Msa0959270 AT4G13280.1 33.333 537 317 9 27 556 22 524 8.75e-95 299
Msa0959270 AT4G16730.1 33.526 519 321 11 52 554 27 537 9.29e-95 300
Msa0959270 AT4G16730.2 33.400 500 310 10 73 556 1 493 8.18e-92 290
Msa0959270 AT1G61680.1 32.665 499 324 4 54 546 77 569 2.88e-89 286
Msa0959270 AT2G24210.1 31.429 560 363 11 10 556 39 590 7.85e-89 286
Msa0959270 AT4G16740.1 31.598 557 356 12 12 556 21 564 5.12e-88 283
Msa0959270 AT1G61680.2 32.265 499 319 5 54 546 77 562 8.00e-86 277
Msa0959270 AT5G48110.1 37.901 343 208 5 215 556 1 339 2.53e-85 268
Msa0959270 AT1G48820.1 31.354 539 320 11 17 549 63 557 1.02e-83 271
Msa0959270 AT3G25820.1 29.856 556 370 12 15 556 45 594 5.83e-81 265
Msa0959270 AT3G25830.1 29.856 556 370 12 15 556 45 594 5.83e-81 265
Msa0959270 AT3G25810.1 30.481 561 363 12 15 556 45 597 3.85e-80 263
Msa0959270 AT1G66020.2 34.688 369 232 6 17 379 56 421 1.96e-68 227
Msa0959270 AT4G16740.2 34.392 378 229 7 14 381 23 391 4.23e-68 225
Msa0959270 AT3G25820.2 31.593 383 249 8 15 389 45 422 7.19e-62 210
Msa0959270 AT4G16740.4 34.251 327 197 6 14 330 23 341 9.41e-57 195
Msa0959270 AT4G16740.3 34.251 327 197 6 14 330 23 341 9.41e-57 195
Msa0959270 AT3G25820.4 31.889 323 209 6 15 330 45 363 2.29e-53 186
Msa0959270 AT3G25820.3 31.889 323 209 6 15 330 45 363 2.29e-53 186
Msa0959270 AT1G79460.1 24.283 523 343 18 70 556 274 779 2.02e-31 130
Msa0959270 AT1G61120.1 23.576 509 353 10 71 556 289 784 3.49e-26 114
Msa0959270 AT4G02780.1 28.077 260 159 5 68 300 329 587 4.34e-21 98.2

Find 88 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTATTGCTGTGCTATTT+AGG 0.092626 6_3:+75787751 Msa0959270:CDS
TCTACTTGCATTCGCAAAAT+TGG 0.162166 6_3:+75788722 Msa0959270:CDS
ATGCAAGTAGAATTTCTTTA+TGG 0.187822 6_3:-75788710 None:intergenic
TTCTATTGCTGTGCTATTTA+GGG 0.199483 6_3:+75787752 Msa0959270:CDS
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_3:-75788995 None:intergenic
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_3:+75787702 Msa0959270:CDS
TCCTTATGCTTCAGAATCTA+TGG 0.272455 6_3:+75787151 Msa0959270:CDS
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_3:+75790466 Msa0959270:CDS
AGCCTGCATCAAAAGGAATT+TGG 0.290423 6_3:+75788762 Msa0959270:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_3:+75787671 Msa0959270:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_3:-75789037 None:intergenic
CAGATTTCCACCCTAGCGTT+TGG 0.311610 6_3:+75787114 Msa0959270:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.325288 6_3:+75787115 Msa0959270:CDS
TGCAAAACCGATTTCTCATT+AGG 0.335406 6_3:-75787080 None:intergenic
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6_3:+75789391 Msa0959270:CDS
TGTGCGGCAATATTCATATC+AGG 0.335782 6_3:-75787531 None:intergenic
TGAGGGAATATGATATGAAT+AGG 0.340079 6_3:+75790668 Msa0959270:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_3:-75788434 None:intergenic
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6_3:+75788950 Msa0959270:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_3:+75790460 Msa0959270:CDS
AGGACATGTTTCTTCGTACT+TGG 0.361077 6_3:+75790636 Msa0959270:CDS
CATCAATCCTAATGAGAAAT+CGG 0.381109 6_3:+75787073 Msa0959270:CDS
CGACAAAAGACATCTTTGAT+TGG 0.386870 6_3:+75790412 Msa0959270:CDS
CGTACTTGGAATGTTATATG+AGG 0.388936 6_3:+75790650 Msa0959270:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6_3:-75788688 None:intergenic
GATTGACTCAATATGTCGTT+TGG 0.390339 6_3:+75787629 Msa0959270:CDS
TGCAAGTAGAATTTCTTTAT+GGG 0.391414 6_3:-75788709 None:intergenic
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_3:+75789424 Msa0959270:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_3:-75790321 None:intergenic
TAAAGCAACTTCATGTAATC+CGG 0.421098 6_3:-75789410 None:intergenic
GACAAAAGACATCTTTGATT+GGG 0.439226 6_3:+75790413 Msa0959270:CDS
ATAAATACTCAAATTTCTAC+AGG 0.441751 6_3:-75790901 None:intergenic
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_3:+75790713 Msa0959270:CDS
TTCTGGTCACCTTGAGTCCA+TGG 0.446304 6_3:+75788566 Msa0959270:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_3:+75790467 Msa0959270:CDS
TAGGTGGGATATTAATTGCT+TGG 0.452782 6_3:+75789379 Msa0959270:intron
TACGACTTCTTACATTGGAA+TGG 0.454510 6_3:+75790380 Msa0959270:CDS
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6_3:-75790295 None:intergenic
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_3:+75790381 Msa0959270:CDS
GCTCCAAAGCCTGCATCAAA+AGG 0.461740 6_3:+75788755 Msa0959270:CDS
GATGACACATATGATGCATA+TGG 0.467097 6_3:+75789054 Msa0959270:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_3:+75789464 Msa0959270:CDS
ATTGACTCAATATGTCGTTT+GGG 0.473862 6_3:+75787630 Msa0959270:CDS
GAGGGAATATGATATGAATA+GGG 0.475500 6_3:+75790669 Msa0959270:CDS
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_3:+75790729 Msa0959270:CDS
ATATTGGGGCTCAAAATATA+CGG 0.495144 6_3:-75788980 None:intergenic
TTGAGAACACACGTCAGAAT+AGG 0.502783 6_3:-75790781 None:intergenic
CATGGACTTTACGTTTCACC+TGG 0.512238 6_3:+75787786 Msa0959270:CDS
ATACAGGTGGTGGAAGGAGT+TGG 0.512387 6_3:+75788894 Msa0959270:intron
AGATGTGTTCAACCAATTCA+AGG 0.513117 6_3:+75788422 Msa0959270:intron
ACCATAGATTCTGAAGCATA+AGG 0.518574 6_3:-75787152 None:intergenic
AGGACTCAATCGTGTGGCCA+TGG 0.520582 6_3:-75788583 None:intergenic
TAACTTCTTGCCACTAGCCT+AGG 0.521919 6_3:-75788660 None:intergenic
GCCTCACATATGATGGTTCA+TGG 0.522278 6_3:+75788510 Msa0959270:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_3:-75790369 None:intergenic
GTGGGATATTAATTGCTTGG+AGG 0.529634 6_3:+75789382 Msa0959270:CDS
TGGCCTCACTCATATAAGCT+TGG 0.531321 6_3:-75790275 None:intergenic
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_3:-75788994 None:intergenic
ATAGGTAACGGAACTTCAGT+TGG 0.538099 6_3:-75790763 None:intergenic
AAACAGTTTGAGCAGAAAAG+AGG 0.539017 6_3:+75790616 Msa0959270:intron
AACATTGGTCGTAGATGTTG+AGG 0.541350 6_3:+75788467 Msa0959270:CDS
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_3:+75788992 Msa0959270:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6_3:+75790280 Msa0959270:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_3:+75787768 Msa0959270:CDS
TTTACTTGTGTTGCAAGAGA+AGG 0.558925 6_3:-75788603 None:intergenic
GTACTTGGAATGTTATATGA+GGG 0.567173 6_3:+75790651 Msa0959270:CDS
GTATGAAGCCTCACATATGA+TGG 0.567934 6_3:+75788503 Msa0959270:CDS
ATCGTGTGGCCATGGACTCA+AGG 0.569017 6_3:-75788575 None:intergenic
CTGTGCTATTTAGGGTGTTG+AGG 0.569842 6_3:+75787760 Msa0959270:CDS
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_3:+75790356 Msa0959270:CDS
CTTTATATACAGGTGGTGGA+AGG 0.574461 6_3:+75788888 Msa0959270:intron
ATAGCACAGCAATAGAATGA+AGG 0.574698 6_3:-75787746 None:intergenic
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_3:+75790375 Msa0959270:CDS
AGGAAACTTCAGTGAAACAT+TGG 0.587870 6_3:+75788452 Msa0959270:CDS
ACTACTCTATCTCGTGCATA+CGG 0.590301 6_3:-75788934 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_3:+75790342 Msa0959270:CDS
GATTTCCACCCTAGCGTTTG+GGG 0.596026 6_3:+75787116 Msa0959270:CDS
AATCTCCCCAAACGCTAGGG+TGG 0.601357 6_3:-75787121 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_3:+75790841 Msa0959270:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_3:-75790368 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_3:+75788432 Msa0959270:CDS
ACATTGGTCGTAGATGTTGA+GGG 0.633793 6_3:+75788468 Msa0959270:CDS
ACCATGAACCATCATATGTG+AGG 0.634158 6_3:-75788511 None:intergenic
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_3:+75790272 Msa0959270:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.666273 6_3:+75790488 Msa0959270:CDS
ACACACGTCAGAATAGGTAA+CGG 0.688917 6_3:-75790775 None:intergenic
AAGAGAAGGACTCAATCGTG+TGG 0.693305 6_3:-75788589 None:intergenic
TAACTATATACCAACAACAG+AGG 0.703519 6_3:+75790311 Msa0959270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTTATGTTTTTAATT+TGG + chr6_3:75787842-75787861 Msa0959270:intron 10.0%
!!! GAAATTTTTTTACATAAAAT+AGG + chr6_3:75788035-75788054 Msa0959270:intron 10.0%
!!! ATTTCATTTTAATTTTTTTG+TGG + chr6_3:75789623-75789642 Msa0959270:intron 10.0%
!!! CAATTAACATTTATTTTATA+TGG + chr6_3:75790224-75790243 Msa0959270:intron 10.0%
!! AATAAAAAAAAGACCATTTA+AGG - chr6_3:75787260-75787279 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG - chr6_3:75787396-75787415 None:intergenic 15.0%
!! ACAAATTGATAAACTAAAAA+AGG + chr6_3:75787551-75787570 Msa0959270:CDS 15.0%
!! TAATATGAATGTCTAATAAA+TGG + chr6_3:75787966-75787985 Msa0959270:intron 15.0%
!!! ATTGTTGTTTAATATTATTG+TGG + chr6_3:75788381-75788400 Msa0959270:intron 15.0%
!! ATAAAGACAAAAAATAGTAT+AGG - chr6_3:75788874-75788893 None:intergenic 15.0%
!!! TATTTTTTGTCTTTATATAC+AGG + chr6_3:75788878-75788897 Msa0959270:intron 15.0%
!!! TTGAAATCAAAATGATTTTT+AGG + chr6_3:75789360-75789379 Msa0959270:intron 15.0%
!!! AAACATTTTTACATCATTTT+AGG + chr6_3:75789724-75789743 Msa0959270:intron 15.0%
!!! TTAATTACATAGTTTTTCTT+TGG + chr6_3:75790197-75790216 Msa0959270:intron 15.0%
!!! TTTTAGTTTATCAATTTGTG+CGG - chr6_3:75787550-75787569 None:intergenic 20.0%
!! AATTGATAAACTAAAAAAGG+AGG + chr6_3:75787554-75787573 Msa0959270:CDS 20.0%
!! TTGAGTAAAACAAATTAGAT+TGG + chr6_3:75787873-75787892 Msa0959270:intron 20.0%
!!! AATTCTCTTTTTACTAAAAG+TGG - chr6_3:75787996-75788015 None:intergenic 20.0%
!! TGATCGTAAAGTAATATTAA+TGG + chr6_3:75788149-75788168 Msa0959270:intron 20.0%
!!! TATTAAGTAAGAACCTTTTT+TGG + chr6_3:75788188-75788207 Msa0959270:intron 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + chr6_3:75789086-75789105 Msa0959270:CDS 20.0%
!!! TATTGTTTATCTCTAAAGTT+TGG - chr6_3:75789169-75789188 None:intergenic 20.0%
!!! ATCTTTTAACAATAGAGTAA+TGG + chr6_3:75789331-75789350 Msa0959270:intron 20.0%
!!! AAATCAAAATGATTTTTAGG+TGG + chr6_3:75789363-75789382 Msa0959270:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + chr6_3:75789364-75789383 Msa0959270:intron 20.0%
!!! ATTTTTTTGTGGTTATCAAA+TGG + chr6_3:75789634-75789653 Msa0959270:intron 20.0%
!! TGTAAAAAACTTATTATCCA+TGG + chr6_3:75789862-75789881 Msa0959270:intron 20.0%
!! TCGTAGAATTAATATTACAA+AGG - chr6_3:75790104-75790123 None:intergenic 20.0%
!!! TATCTTGACATTTTAATTAC+TGG + chr6_3:75790130-75790149 Msa0959270:intron 20.0%
! AATTCTTTAAATCAACAGCA+AGG + chr6_3:75787179-75787198 Msa0959270:intron 25.0%
! AATGACACTTAATTGTTGTA+TGG - chr6_3:75787469-75787488 None:intergenic 25.0%
!!! ATCATGTTTTGAATACATAC+AGG + chr6_3:75787506-75787525 Msa0959270:intron 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + chr6_3:75787671-75787690 Msa0959270:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG + chr6_3:75787702-75787721 Msa0959270:CDS 25.0%
!! TAAGTTGAGATATATATACC+AGG - chr6_3:75787807-75787826 None:intergenic 25.0%
!! GTAATATTTGACTTTGTCAA+GGG + chr6_3:75787937-75787956 Msa0959270:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - chr6_3:75788088-75788107 None:intergenic 25.0%
! TGCAAGTAGAATTTCTTTAT+GGG - chr6_3:75788712-75788731 None:intergenic 25.0%
! ATGCAAGTAGAATTTCTTTA+TGG - chr6_3:75788713-75788732 None:intergenic 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + chr6_3:75788881-75788900 Msa0959270:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG - chr6_3:75789040-75789059 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr6_3:75789097-75789116 Msa0959270:CDS 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + chr6_3:75789198-75789217 Msa0959270:intron 25.0%
! AATTTATCCATCTTCAATCT+TGG + chr6_3:75789243-75789262 Msa0959270:intron 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG - chr6_3:75789509-75789528 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG - chr6_3:75789510-75789529 None:intergenic 25.0%
! TTCAATCAAATAACTTCATG+AGG - chr6_3:75789800-75789819 None:intergenic 25.0%
! AACTCTGTTAATAAAATCCA+TGG - chr6_3:75789882-75789901 None:intergenic 25.0%
! AAGAAAAATGTATGATCATG+AGG + chr6_3:75789939-75789958 Msa0959270:intron 25.0%
CATCAATCCTAATGAGAAAT+CGG + chr6_3:75787073-75787092 Msa0959270:CDS 30.0%
ATGAAAAGTGATTGAAGAGT+AGG + chr6_3:75787213-75787232 Msa0959270:intron 30.0%
ACGCATAACAAAACCTTAAA+TGG + chr6_3:75787244-75787263 Msa0959270:intron 30.0%
GGAATGAAACTTGATATTCT+AGG + chr6_3:75787291-75787310 Msa0959270:intron 30.0%
!!! ATCAAGTTGACTTTTTCCAT+GGG - chr6_3:75787612-75787631 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+TGG - chr6_3:75787613-75787632 None:intergenic 30.0%
! ATTGACTCAATATGTCGTTT+GGG + chr6_3:75787630-75787649 Msa0959270:CDS 30.0%
!! ATTCTATTGCTGTGCTATTT+AGG + chr6_3:75787751-75787770 Msa0959270:CDS 30.0%
!! TTCTATTGCTGTGCTATTTA+GGG + chr6_3:75787752-75787771 Msa0959270:CDS 30.0%
! CGTAATATTTGACTTTGTCA+AGG + chr6_3:75787936-75787955 Msa0959270:intron 30.0%
GGTTCATGGTGAAAAAATAT+TGG + chr6_3:75788524-75788543 Msa0959270:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG + chr6_3:75788530-75788549 Msa0959270:CDS 30.0%
AAAAATATTGGAAGAGGCTT+TGG + chr6_3:75788536-75788555 Msa0959270:CDS 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG + chr6_3:75788951-75788970 Msa0959270:CDS 30.0%
ATATTGGGGCTCAAAATATA+CGG - chr6_3:75788983-75789002 None:intergenic 30.0%
TTTCCTTGCTTGAGAATATT+GGG - chr6_3:75788998-75789017 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - chr6_3:75788999-75789018 None:intergenic 30.0%
TAAAGCAACTTCATGTAATC+CGG - chr6_3:75789413-75789432 None:intergenic 30.0%
! GTTGCTTTATAAATCACTCT+TGG + chr6_3:75789424-75789443 Msa0959270:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - chr6_3:75789508-75789527 None:intergenic 30.0%
TGGTTATCAAATGGAAGTTT+AGG + chr6_3:75789643-75789662 Msa0959270:intron 30.0%
! AAAGTATCACCATAATCACT+TGG + chr6_3:75789759-75789778 Msa0959270:intron 30.0%
! TCATGAGGATACATTTTTCT+TGG - chr6_3:75789785-75789804 None:intergenic 30.0%
TGCAAAAAACTTATTGTCCA+TGG + chr6_3:75790018-75790037 Msa0959270:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - chr6_3:75790038-75790057 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + chr6_3:75790311-75790330 Msa0959270:CDS 30.0%
CACATATCAACAATATCAAG+TGG + chr6_3:75790342-75790361 Msa0959270:CDS 30.0%
GACAAAAGACATCTTTGATT+GGG + chr6_3:75790413-75790432 Msa0959270:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + chr6_3:75790651-75790670 Msa0959270:CDS 30.0%
TGAGGGAATATGATATGAAT+AGG + chr6_3:75790668-75790687 Msa0959270:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + chr6_3:75790669-75790688 Msa0959270:CDS 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - chr6_3:75790701-75790720 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - chr6_3:75790714-75790733 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG + chr6_3:75790713-75790732 Msa0959270:CDS 30.0%
! TGCAAAACCGATTTCTCATT+AGG - chr6_3:75787083-75787102 None:intergenic 35.0%
!! ATGAGAAATCGGTTTTGCAA+AGG + chr6_3:75787084-75787103 Msa0959270:CDS 35.0%
TCCTTATGCTTCAGAATCTA+TGG + chr6_3:75787151-75787170 Msa0959270:CDS 35.0%
!! ACCATAGATTCTGAAGCATA+AGG - chr6_3:75787155-75787174 None:intergenic 35.0%
AATCCTGGGCTAATATTAAG+TGG - chr6_3:75787356-75787375 None:intergenic 35.0%
ATGAGAGTAACTTGAATCCT+GGG - chr6_3:75787370-75787389 None:intergenic 35.0%
AATGAGAGTAACTTGAATCC+TGG - chr6_3:75787371-75787390 None:intergenic 35.0%
! TTTTGCTAAATGCAGTCCAT+AGG + chr6_3:75787438-75787457 Msa0959270:intron 35.0%
TTGTTGTATGGATCAACCTA+TGG - chr6_3:75787457-75787476 None:intergenic 35.0%
! GATTGACTCAATATGTCGTT+TGG + chr6_3:75787629-75787648 Msa0959270:CDS 35.0%
ATAGCACAGCAATAGAATGA+AGG - chr6_3:75787749-75787768 None:intergenic 35.0%
AGATGTGTTCAACCAATTCA+AGG + chr6_3:75788422-75788441 Msa0959270:intron 35.0%
AGGAAACTTCAGTGAAACAT+TGG + chr6_3:75788452-75788471 Msa0959270:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG - chr6_3:75788606-75788625 None:intergenic 35.0%
TCTACTTGCATTCGCAAAAT+TGG + chr6_3:75788722-75788741 Msa0959270:CDS 35.0%
! TTCCAAATTCCTTTTGATGC+AGG - chr6_3:75788767-75788786 None:intergenic 35.0%
TTGTCTTTATATACAGGTGG+TGG + chr6_3:75788884-75788903 Msa0959270:intron 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG + chr6_3:75788950-75788969 Msa0959270:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG - chr6_3:75788997-75789016 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG + chr6_3:75789054-75789073 Msa0959270:CDS 35.0%
AGCACATCATGCAATAGTAT+TGG + chr6_3:75789122-75789141 Msa0959270:intron 35.0%
TAGGTGGGATATTAATTGCT+TGG + chr6_3:75789379-75789398 Msa0959270:intron 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + chr6_3:75789464-75789483 Msa0959270:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - chr6_3:75789501-75789520 None:intergenic 35.0%
! TTTTCTTGGCCAAGTGATTA+TGG - chr6_3:75789771-75789790 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG + chr6_3:75790272-75790291 Msa0959270:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG + chr6_3:75790380-75790399 Msa0959270:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + chr6_3:75790381-75790400 Msa0959270:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + chr6_3:75790412-75790431 Msa0959270:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG - chr6_3:75790450-75790469 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG + chr6_3:75790616-75790635 Msa0959270:intron 35.0%
CGTACTTGGAATGTTATATG+AGG + chr6_3:75790650-75790669 Msa0959270:CDS 35.0%
CGCTTGGAAAGATATAAATC+AGG + chr6_3:75790729-75790748 Msa0959270:CDS 35.0%
AAAAATCTCCCCAAACGCTA+GGG - chr6_3:75787127-75787146 None:intergenic 40.0%
AAAAAATCTCCCCAAACGCT+AGG - chr6_3:75787128-75787147 None:intergenic 40.0%
CTGGGCTAATATTAAGTGGT+TGG - chr6_3:75787352-75787371 None:intergenic 40.0%
CAACCACTTAATATTAGCCC+AGG + chr6_3:75787350-75787369 Msa0959270:intron 40.0%
TGTGCGGCAATATTCATATC+AGG - chr6_3:75787534-75787553 None:intergenic 40.0%
CTCAAAAACAGAGAAACCCA+TGG + chr6_3:75787593-75787612 Msa0959270:CDS 40.0%
!! GTGCTTCTGAAGTCCAAAAA+AGG - chr6_3:75788204-75788223 None:intergenic 40.0%
AACATTGGTCGTAGATGTTG+AGG + chr6_3:75788467-75788486 Msa0959270:CDS 40.0%
ACATTGGTCGTAGATGTTGA+GGG + chr6_3:75788468-75788487 Msa0959270:CDS 40.0%
GTATGAAGCCTCACATATGA+TGG + chr6_3:75788503-75788522 Msa0959270:CDS 40.0%
ACCATGAACCATCATATGTG+AGG - chr6_3:75788514-75788533 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG - chr6_3:75788691-75788710 None:intergenic 40.0%
! ATTCCTTTTGATGCAGGCTT+TGG - chr6_3:75788761-75788780 None:intergenic 40.0%
AGCCTGCATCAAAAGGAATT+TGG + chr6_3:75788762-75788781 Msa0959270:CDS 40.0%
!! CTTTATATACAGGTGGTGGA+AGG + chr6_3:75788888-75788907 Msa0959270:intron 40.0%
ACTACTCTATCTCGTGCATA+CGG - chr6_3:75788937-75788956 None:intergenic 40.0%
TTAGCGACCAAGATTGAAGA+TGG - chr6_3:75789253-75789272 None:intergenic 40.0%
GTGGGATATTAATTGCTTGG+AGG + chr6_3:75789382-75789401 Msa0959270:CDS 40.0%
TAATTGCTTGGAGGATCTTC+CGG + chr6_3:75789391-75789410 Msa0959270:CDS 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - chr6_3:75789502-75789521 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG - chr6_3:75790298-75790317 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG + chr6_3:75790375-75790394 Msa0959270:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG + chr6_3:75790467-75790486 Msa0959270:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + chr6_3:75790636-75790655 Msa0959270:CDS 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - chr6_3:75790766-75790785 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - chr6_3:75790778-75790797 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - chr6_3:75790784-75790803 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG + chr6_3:75790801-75790820 Msa0959270:CDS 40.0%
GATAACTACACACACTCTGA+CGG + chr6_3:75790841-75790860 Msa0959270:CDS 40.0%
AGATTTCCACCCTAGCGTTT+GGG + chr6_3:75787115-75787134 Msa0959270:CDS 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + chr6_3:75787760-75787779 Msa0959270:CDS 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + chr6_3:75787768-75787787 Msa0959270:CDS 45.0%
CATGGACTTTACGTTTCACC+TGG + chr6_3:75787786-75787805 Msa0959270:CDS 45.0%
AACCAATTCAAGGACGAGCA+AGG + chr6_3:75788432-75788451 Msa0959270:CDS 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - chr6_3:75788437-75788456 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG + chr6_3:75788510-75788529 Msa0959270:CDS 45.0%
!!! GAGGCTTTGGCTTTTACTTC+TGG + chr6_3:75788549-75788568 Msa0959270:CDS 45.0%
AAGAGAAGGACTCAATCGTG+TGG - chr6_3:75788592-75788611 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - chr6_3:75788650-75788669 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG + chr6_3:75788650-75788669 Msa0959270:CDS 45.0%
! TAACTTCTTGCCACTAGCCT+AGG - chr6_3:75788663-75788682 None:intergenic 45.0%
AGCCCCAATATTCTCAAGCA+AGG + chr6_3:75788992-75789011 Msa0959270:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG - chr6_3:75790278-75790297 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG + chr6_3:75790280-75790299 Msa0959270:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG - chr6_3:75790324-75790343 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + chr6_3:75790356-75790375 Msa0959270:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - chr6_3:75790371-75790390 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - chr6_3:75790372-75790391 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG + chr6_3:75790460-75790479 Msa0959270:CDS 45.0%
CTGCTATACATTGCAGGCTT+AGG + chr6_3:75790466-75790485 Msa0959270:CDS 45.0%
GGATGAAATTGTGTCAAGCG+AGG + chr6_3:75790488-75790507 Msa0959270:CDS 45.0%
!!! TTTTTTTATTTTTTATCAAT+AGG + chr6_3:75787270-75787289 Msa0959270:intron 5.0%
!!! ATTTTATAATAATAAAAGAT+AGG + chr6_3:75788013-75788032 Msa0959270:intron 5.0%
CAGATTTCCACCCTAGCGTT+TGG + chr6_3:75787114-75787133 Msa0959270:CDS 50.0%
GATTTCCACCCTAGCGTTTG+GGG + chr6_3:75787116-75787135 Msa0959270:CDS 50.0%
TTCTGGTCACCTTGAGTCCA+TGG + chr6_3:75788566-75788585 Msa0959270:CDS 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + chr6_3:75788643-75788662 Msa0959270:CDS 50.0%
GCTCCAAAGCCTGCATCAAA+AGG + chr6_3:75788755-75788774 Msa0959270:CDS 50.0%
!! ATACAGGTGGTGGAAGGAGT+TGG + chr6_3:75788894-75788913 Msa0959270:intron 50.0%
AATCTCCCCAAACGCTAGGG+TGG - chr6_3:75787124-75787143 None:intergenic 55.0%
ATCGTGTGGCCATGGACTCA+AGG - chr6_3:75788578-75788597 None:intergenic 55.0%
AGGACTCAATCGTGTGGCCA+TGG - chr6_3:75788586-75788605 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 75787056 75790915 75787056 ID=Msa0959270;Name=Msa0959270
chr6_3 mRNA 75787056 75790915 75787056 ID=Msa0959270-mRNA-1;Parent=Msa0959270;Name=Msa0959270-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|7|0|556
chr6_3 exon 75787056 75787172 75787056 ID=Msa0959270-mRNA-1:exon:13595;Parent=Msa0959270-mRNA-1
chr6_3 exon 75787528 75787807 75787528 ID=Msa0959270-mRNA-1:exon:13596;Parent=Msa0959270-mRNA-1
chr6_3 exon 75788424 75788796 75788424 ID=Msa0959270-mRNA-1:exon:13597;Parent=Msa0959270-mRNA-1
chr6_3 exon 75788900 75789118 75788900 ID=Msa0959270-mRNA-1:exon:13598;Parent=Msa0959270-mRNA-1
chr6_3 exon 75789382 75789520 75789382 ID=Msa0959270-mRNA-1:exon:13599;Parent=Msa0959270-mRNA-1
chr6_3 exon 75790261 75790509 75790261 ID=Msa0959270-mRNA-1:exon:13600;Parent=Msa0959270-mRNA-1
chr6_3 exon 75790622 75790915 75790622 ID=Msa0959270-mRNA-1:exon:13601;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75787056 75787172 75787056 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75787528 75787807 75787528 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75788424 75788796 75788424 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75788900 75789118 75788900 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75789382 75789520 75789382 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75790261 75790509 75790261 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
chr6_3 CDS 75790622 75790915 75790622 ID=Msa0959270-mRNA-1:cds;Parent=Msa0959270-mRNA-1
Gene Sequence

>Msa0959270

ATGTCTTCAGTAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGGAATGTTGCAGATTTCCACCCTAGCGTTTGGGGAGATTTTTTCATTCCTTATGCTTCAGAATCTATGGAACCTGATATGAATATTGCCGCACAAATTGATAAACTAAAAAAGGAGGTTAGACAAATGCTTGTCTCAAAAACAGAGAAACCCATGGAAAAAGTCAACTTGATTGACTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCTATTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTACGTTTCACCTGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACATTGGTCGTAGATGTTGAGGGCATGTTACACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCTTTGGCTTTTACTTCTGGTCACCTTGAGTCCATGGCCACACGATTGAGTCCTTCTCTTGCAACACAAGTAAAACAAAGCTTAAGACAATCTCTCCGCAAAAACTTGCCTAGGCTAGTGGCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAAAGAAATTCTACTTGCATTCGCAAAATTGGATTTTAATATGCTCCAAAGCCTGCATCAAAAGGAATTTGGAAACATTAGCAAGTGGTGGAAGGAGTTGGATATTTCTCAAAAACTACCGTATGCACGAGATAGAGTAGTAGAATGTTGCTTTTGGGTTATGACCGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATATGATGCATATGGAACTATTGATGAATTAGAACTTTTTACTAAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATATCGACAAAAGACATCTTTGATTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTGGAATGTTATATGAGGGAATATGATATGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGAAGTTCCGTTACCTATTCTGACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGACTAATGAAGACATATATTAATGATTTGCTTGTCAATCCTGTAGAAATTTGA
Protein sequence

>Msa0959270

MSSVDYINPNEKSVLQRNVADFHPSVWGDFFIPYASESMEPDMNIAAQIDKLKKEVRQMLVSKTEKPMEKVNLIDSICRLGVSYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSIAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETLVVDVEGMLHLYEASHMMVHGEKILEEALAFTSGHLESMATRLSPSLATQVKQSLRQSLRKNLPRLVARSYISIYEQDSSHKEILLAFAKLDFNMLQSLHQKEFGNISKWWKELDISQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTKAIERWDINCLEDLPDYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNISTKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDMNREAAIQECQKKIDNAWKDINQECLKPTEVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPVEI*