Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920820 | XP_004497487.1 | 72.178 | 381 | 106 | 0 | 1 | 381 | 1 | 381 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920820 | sp|Q6Q3H3|TPSGD_VITVI | 55.085 | 354 | 155 | 1 | 17 | 370 | 22 | 371 | 2.87e-141 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0894020 | Msa0920820 | 0.801713 | 7.905848e-49 | -8.615850e-47 |
| Msa0894040 | Msa0920820 | 0.823806 | 1.135875e-53 | -8.615850e-47 |
| Msa0894080 | Msa0920820 | 0.823428 | 1.392663e-53 | -8.615850e-47 |
| Msa0894100 | Msa0920820 | 0.847481 | 1.125253e-59 | -8.615850e-47 |
| Msa0916290 | Msa0920820 | 0.836980 | 6.807466e-57 | -8.615850e-47 |
| Msa0916310 | Msa0920820 | 0.833495 | 5.162668e-56 | -8.615850e-47 |
| Msa0920710 | Msa0920820 | 0.817735 | 2.826827e-52 | -8.615850e-47 |
| Msa0920720 | Msa0920820 | 0.820609 | 6.264797e-53 | -8.615850e-47 |
| Msa0920760 | Msa0920820 | 0.834083 | 3.680149e-56 | -8.615850e-47 |
| Msa0920770 | Msa0920820 | 0.844333 | 8.069012e-59 | -8.615850e-47 |
| Msa0920810 | Msa0920820 | 0.832674 | 8.260344e-56 | -8.615850e-47 |
| Msa0920820 | Msa0920830 | 0.826990 | 2.002721e-54 | -8.615850e-47 |
| Msa0920820 | Msa0959180 | 0.810233 | 1.276317e-50 | -8.615850e-47 |
| Msa0920820 | Msa0959190 | 0.808990 | 2.360760e-50 | -8.615850e-47 |
| Msa0920820 | Msa0959250 | 0.828234 | 1.006756e-54 | -8.615850e-47 |
| Msa0920820 | Msa0959270 | 0.813796 | 2.135138e-51 | -8.615850e-47 |
| Msa0920820 | Msa0967190 | 0.807448 | 5.029391e-50 | -8.615850e-47 |
| Msa0920820 | Msa0967200 | 0.802472 | 5.521343e-49 | -8.615850e-47 |
| Msa0920820 | Msa0995410 | 0.823823 | 1.125827e-53 | -8.615850e-47 |
| Msa0920820 | Msa0995430 | 0.838109 | 3.496420e-57 | -8.615850e-47 |
| Msa0920820 | Msa0995440 | 0.824287 | 8.757426e-54 | -8.615850e-47 |
| Msa0920820 | Msa0995470 | 0.800812 | 1.209294e-48 | -8.615850e-47 |
| Msa0920820 | Msa0995490 | 0.827263 | 1.722995e-54 | -8.615850e-47 |
| Msa0920820 | Msa0995600 | 0.846870 | 1.654657e-59 | -8.615850e-47 |
| Msa0920820 | Msa0995610 | 0.847248 | 1.303653e-59 | -8.615850e-47 |
| Msa0920820 | Msa0995620 | 0.833349 | 5.613181e-56 | -8.615850e-47 |
| Msa0920820 | Msa0995630 | 0.830412 | 2.980350e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920820 | MtrunA17_Chr5g0425371 | 71.504 | 379 | 105 | 1 | 1 | 379 | 1 | 376 | 0.0 | 572 |
| Msa0920820 | MtrunA17_Chr6g0465981 | 72.149 | 377 | 102 | 1 | 1 | 377 | 1 | 374 | 0.0 | 568 |
| Msa0920820 | MtrunA17_Chr6g0465871 | 72.149 | 377 | 102 | 1 | 1 | 377 | 1 | 374 | 0.0 | 568 |
| Msa0920820 | MtrunA17_Chr6g0466081 | 72.149 | 377 | 102 | 1 | 1 | 377 | 1 | 374 | 0.0 | 568 |
| Msa0920820 | MtrunA17_Chr6g0466051 | 71.958 | 378 | 103 | 1 | 1 | 378 | 1 | 375 | 0.0 | 567 |
| Msa0920820 | MtrunA17_Chr6g0465911 | 71.693 | 378 | 104 | 1 | 1 | 378 | 1 | 375 | 0.0 | 565 |
| Msa0920820 | MtrunA17_Chr7g0236991 | 71.429 | 371 | 103 | 1 | 1 | 371 | 1 | 368 | 0.0 | 558 |
| Msa0920820 | MtrunA17_Chr7g0237001 | 71.159 | 371 | 104 | 1 | 1 | 371 | 1 | 368 | 0.0 | 556 |
| Msa0920820 | MtrunA17_Chr7g0237041 | 71.159 | 371 | 104 | 1 | 1 | 371 | 1 | 368 | 0.0 | 556 |
| Msa0920820 | MtrunA17_Chr7g0237081 | 71.159 | 371 | 104 | 1 | 1 | 371 | 1 | 368 | 0.0 | 556 |
| Msa0920820 | MtrunA17_Chr7g0237051 | 71.159 | 371 | 104 | 1 | 1 | 371 | 1 | 368 | 0.0 | 556 |
| Msa0920820 | MtrunA17_Chr6g0451711 | 68.325 | 382 | 120 | 1 | 1 | 381 | 1 | 382 | 0.0 | 548 |
| Msa0920820 | MtrunA17_Chr6g0465441 | 68.519 | 378 | 116 | 1 | 1 | 378 | 1 | 375 | 0.0 | 544 |
| Msa0920820 | MtrunA17_Chr3g0105071 | 67.810 | 379 | 121 | 1 | 1 | 378 | 1 | 379 | 0.0 | 535 |
| Msa0920820 | MtrunA17_Chr6g0466111 | 74.041 | 339 | 88 | 0 | 39 | 377 | 1 | 339 | 0.0 | 523 |
| Msa0920820 | MtrunA17_Chr6g0465851 | 73.529 | 340 | 90 | 0 | 39 | 378 | 1 | 340 | 0.0 | 520 |
| Msa0920820 | MtrunA17_Chr6g0465931 | 73.746 | 339 | 89 | 0 | 39 | 377 | 1 | 339 | 0.0 | 520 |
| Msa0920820 | MtrunA17_Chr3g0082691 | 68.579 | 366 | 114 | 1 | 12 | 376 | 8 | 373 | 0.0 | 518 |
| Msa0920820 | MtrunA17_Chr5g0431571 | 70.411 | 365 | 107 | 1 | 12 | 375 | 4 | 368 | 0.0 | 517 |
| Msa0920820 | MtrunA17_Chr4g0024691 | 65.499 | 371 | 128 | 0 | 8 | 378 | 13 | 383 | 2.68e-178 | 507 |
| Msa0920820 | MtrunA17_Chr7g0236951 | 72.414 | 319 | 88 | 0 | 59 | 377 | 1 | 319 | 2.89e-175 | 490 |
| Msa0920820 | MtrunA17_Chr5g0431651 | 66.033 | 368 | 123 | 2 | 13 | 378 | 7 | 374 | 2.99e-175 | 499 |
| Msa0920820 | MtrunA17_Chr7g0237031 | 72.414 | 319 | 88 | 0 | 59 | 377 | 1 | 319 | 1.10e-174 | 489 |
| Msa0920820 | MtrunA17_Chr7g0236961 | 73.163 | 313 | 84 | 0 | 59 | 371 | 1 | 313 | 2.26e-172 | 490 |
| Msa0920820 | MtrunA17_Chr7g0237011 | 73.163 | 313 | 84 | 0 | 59 | 371 | 1 | 313 | 1.09e-171 | 488 |
| Msa0920820 | MtrunA17_Chr4g0042111 | 60.108 | 371 | 145 | 2 | 2 | 370 | 7 | 376 | 4.19e-161 | 464 |
| Msa0920820 | MtrunA17_Chr2g0319041 | 48.023 | 354 | 181 | 3 | 15 | 365 | 12 | 365 | 9.36e-120 | 358 |
| Msa0920820 | MtrunA17_Chr8g0336181 | 49.570 | 349 | 173 | 2 | 13 | 358 | 9 | 357 | 1.04e-117 | 353 |
| Msa0920820 | MtrunA17_Chr5g0445511 | 69.264 | 231 | 71 | 0 | 151 | 381 | 1 | 231 | 1.17e-117 | 341 |
| Msa0920820 | MtrunA17_Chr4g0008621 | 46.027 | 365 | 194 | 3 | 15 | 376 | 19 | 383 | 1.73e-115 | 343 |
| Msa0920820 | MtrunA17_Chr7g0236971 | 71.759 | 216 | 61 | 0 | 156 | 371 | 1 | 216 | 1.26e-112 | 334 |
| Msa0920820 | MtrunA17_Chr2g0319051 | 47.432 | 331 | 172 | 2 | 48 | 376 | 4 | 334 | 8.50e-111 | 333 |
| Msa0920820 | MtrunA17_Chr6g0466021 | 71.078 | 204 | 56 | 1 | 1 | 204 | 1 | 201 | 1.72e-102 | 301 |
| Msa0920820 | MtrunA17_Chr7g0237071 | 71.782 | 202 | 57 | 0 | 59 | 260 | 1 | 202 | 2.75e-101 | 299 |
| Msa0920820 | MtrunA17_Chr4g0023911 | 40.108 | 369 | 209 | 5 | 13 | 377 | 41 | 401 | 1.38e-87 | 276 |
| Msa0920820 | MtrunA17_Chr2g0310331 | 42.857 | 364 | 196 | 7 | 17 | 377 | 53 | 407 | 8.16e-87 | 274 |
| Msa0920820 | MtrunA17_Chr2g0323131 | 40.752 | 319 | 175 | 3 | 49 | 364 | 67 | 374 | 2.73e-79 | 254 |
| Msa0920820 | MtrunA17_Chr8g0357411 | 36.828 | 372 | 228 | 3 | 7 | 377 | 45 | 410 | 1.19e-78 | 253 |
| Msa0920820 | MtrunA17_Chr2g0323151 | 41.751 | 297 | 160 | 2 | 71 | 364 | 4 | 290 | 1.35e-74 | 239 |
| Msa0920820 | MtrunA17_Chr2g0319071 | 35.312 | 337 | 170 | 7 | 43 | 377 | 20 | 310 | 1.67e-61 | 205 |
| Msa0920820 | MtrunA17_Chr7g0236981 | 67.407 | 135 | 41 | 1 | 1 | 135 | 1 | 132 | 4.06e-60 | 191 |
| Msa0920820 | MtrunA17_Chr4g0048921 | 36.111 | 324 | 198 | 5 | 44 | 365 | 64 | 380 | 1.06e-56 | 194 |
| Msa0920820 | MtrunA17_Chr4g0048911 | 35.294 | 306 | 192 | 4 | 55 | 357 | 61 | 363 | 2.25e-56 | 194 |
| Msa0920820 | MtrunA17_Chr7g0233861 | 62.963 | 135 | 41 | 1 | 196 | 330 | 33 | 158 | 3.59e-53 | 174 |
| Msa0920820 | MtrunA17_Chr2g0280581 | 32.424 | 330 | 204 | 5 | 47 | 365 | 9 | 330 | 2.14e-50 | 176 |
| Msa0920820 | MtrunA17_Chr2g0310401 | 37.600 | 250 | 153 | 2 | 130 | 377 | 5 | 253 | 1.53e-48 | 169 |
| Msa0920820 | MtrunA17_Chr3g0109021 | 32.911 | 316 | 206 | 6 | 54 | 365 | 13 | 326 | 1.21e-44 | 161 |
| Msa0920820 | MtrunA17_Chr3g0109031 | 31.118 | 331 | 223 | 5 | 54 | 381 | 13 | 341 | 1.34e-44 | 161 |
| Msa0920820 | MtrunA17_Chr3g0109001 | 31.861 | 317 | 209 | 6 | 54 | 365 | 13 | 327 | 1.32e-43 | 158 |
| Msa0920820 | MtrunA17_Chr3g0105691 | 32.450 | 302 | 201 | 3 | 54 | 353 | 46 | 346 | 5.92e-43 | 157 |
| Msa0920820 | MtrunA17_Chr3g0108941 | 31.230 | 317 | 211 | 6 | 54 | 365 | 13 | 327 | 2.88e-42 | 154 |
| Msa0920820 | MtrunA17_Chr8g0357221 | 36.145 | 249 | 152 | 4 | 10 | 257 | 48 | 290 | 1.06e-41 | 148 |
| Msa0920820 | MtrunA17_Chr6g0477111 | 31.457 | 302 | 202 | 5 | 68 | 365 | 1 | 301 | 2.95e-41 | 151 |
| Msa0920820 | MtrunA17_Chr5g0445521 | 66.327 | 98 | 33 | 0 | 1 | 98 | 1 | 98 | 3.88e-41 | 140 |
| Msa0920820 | MtrunA17_Chr3g0108981 | 30.795 | 302 | 205 | 3 | 68 | 365 | 1 | 302 | 1.10e-40 | 150 |
| Msa0920820 | MtrunA17_Chr3g0108961 | 30.795 | 302 | 205 | 3 | 68 | 365 | 1 | 302 | 1.10e-40 | 150 |
| Msa0920820 | MtrunA17_Chr3g0099031 | 31.013 | 316 | 212 | 6 | 54 | 365 | 13 | 326 | 2.33e-40 | 149 |
| Msa0920820 | MtrunA17_Chr3g0108991 | 31.013 | 316 | 212 | 6 | 54 | 365 | 13 | 326 | 4.74e-40 | 149 |
| Msa0920820 | MtrunA17_Chr3g0108951 | 31.013 | 316 | 212 | 6 | 54 | 365 | 13 | 326 | 4.74e-40 | 149 |
| Msa0920820 | MtrunA17_Chr3g0108971 | 30.464 | 302 | 205 | 5 | 68 | 365 | 1 | 301 | 1.59e-38 | 144 |
| Msa0920820 | MtrunA17_Chr3g0109011 | 29.801 | 302 | 207 | 5 | 68 | 365 | 1 | 301 | 4.45e-38 | 143 |
| Msa0920820 | MtrunA17_Chr5g0445401 | 70.526 | 95 | 24 | 2 | 166 | 257 | 1 | 94 | 1.78e-35 | 125 |
| Msa0920820 | MtrunA17_Chr2g0319081 | 41.379 | 145 | 78 | 3 | 233 | 376 | 120 | 258 | 1.06e-32 | 127 |
| Msa0920820 | MtrunA17_Chr2g0319081 | 40.164 | 122 | 72 | 1 | 15 | 135 | 19 | 140 | 4.51e-23 | 100 |
| Msa0920820 | MtrunA17_Chr7g0237061 | 72.000 | 75 | 21 | 0 | 297 | 371 | 1 | 75 | 1.06e-30 | 117 |
| Msa0920820 | MtrunA17_Chr6g0477121 | 30.932 | 236 | 159 | 4 | 133 | 365 | 10 | 244 | 2.71e-30 | 120 |
| Msa0920820 | MtrunA17_Chr2g0310121 | 28.086 | 324 | 200 | 9 | 70 | 366 | 275 | 592 | 8.96e-30 | 121 |
| Msa0920820 | MtrunA17_Chr3g0101681 | 28.173 | 323 | 201 | 9 | 73 | 369 | 279 | 596 | 2.25e-28 | 117 |
| Msa0920820 | MtrunA17_Chr6g0466031 | 64.634 | 82 | 29 | 0 | 297 | 378 | 1 | 82 | 7.24e-27 | 107 |
| Msa0920820 | MtrunA17_Chr7g0259881 | 27.273 | 275 | 168 | 6 | 68 | 313 | 227 | 498 | 2.47e-24 | 105 |
| Msa0920820 | MtrunA17_Chr7g0218001 | 29.562 | 274 | 161 | 6 | 68 | 310 | 344 | 616 | 6.47e-24 | 103 |
| Msa0920820 | MtrunA17_Chr7g0217361 | 40.909 | 110 | 65 | 0 | 255 | 364 | 8 | 117 | 6.43e-22 | 95.1 |
| Msa0920820 | MtrunA17_Chr7g0217351 | 29.954 | 217 | 143 | 5 | 46 | 258 | 62 | 273 | 8.72e-22 | 94.4 |
| Msa0920820 | MtrunA17_Chr8g0357231 | 41.250 | 80 | 47 | 0 | 298 | 377 | 1 | 80 | 5.67e-16 | 77.0 |
| Msa0920820 | MtrunA17_Chr7g0218041 | 31.050 | 219 | 123 | 6 | 120 | 311 | 3 | 220 | 9.36e-15 | 75.5 |
| Msa0920820 | MtrunA17_Chr2g0310411 | 31.967 | 122 | 75 | 3 | 10 | 131 | 51 | 164 | 1.43e-13 | 68.2 |
| Msa0920820 | MtrunA17_Chr2g0281651 | 31.343 | 134 | 87 | 3 | 233 | 365 | 43 | 172 | 6.06e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920820 | AT5G23960.2 | 40.166 | 361 | 202 | 6 | 13 | 366 | 3 | 356 | 1.79e-91 | 285 |
| Msa0920820 | AT1G70080.1 | 39.108 | 381 | 223 | 6 | 8 | 381 | 57 | 435 | 2.21e-91 | 287 |
| Msa0920820 | AT5G23960.1 | 40.110 | 364 | 200 | 8 | 13 | 366 | 3 | 358 | 3.60e-90 | 282 |
| Msa0920820 | AT3G14490.1 | 39.837 | 369 | 214 | 3 | 17 | 380 | 60 | 425 | 1.29e-89 | 282 |
| Msa0920820 | AT1G31950.2 | 38.814 | 371 | 205 | 5 | 22 | 380 | 70 | 430 | 1.49e-88 | 277 |
| Msa0920820 | AT1G31950.3 | 38.814 | 371 | 205 | 5 | 22 | 380 | 70 | 430 | 1.03e-87 | 277 |
| Msa0920820 | AT1G31950.1 | 39.286 | 364 | 212 | 4 | 22 | 380 | 70 | 429 | 7.93e-87 | 275 |
| Msa0920820 | AT3G14540.2 | 39.669 | 363 | 212 | 3 | 22 | 380 | 65 | 424 | 7.02e-86 | 270 |
| Msa0920820 | AT3G14540.1 | 39.669 | 363 | 212 | 3 | 22 | 380 | 65 | 424 | 6.32e-85 | 270 |
| Msa0920820 | AT3G14520.1 | 39.227 | 362 | 211 | 4 | 22 | 378 | 68 | 425 | 1.26e-84 | 269 |
| Msa0920820 | AT4G15870.1 | 40.000 | 360 | 204 | 8 | 25 | 376 | 75 | 430 | 4.32e-81 | 259 |
| Msa0920820 | AT3G29410.1 | 38.441 | 372 | 215 | 5 | 17 | 381 | 64 | 428 | 5.17e-81 | 259 |
| Msa0920820 | AT1G33750.1 | 37.047 | 359 | 220 | 4 | 24 | 380 | 73 | 427 | 5.29e-79 | 254 |
| Msa0920820 | AT5G44630.1 | 37.433 | 374 | 217 | 8 | 18 | 380 | 14 | 381 | 9.63e-78 | 250 |
| Msa0920820 | AT4G20210.1 | 36.631 | 374 | 224 | 7 | 16 | 381 | 57 | 425 | 7.92e-77 | 249 |
| Msa0920820 | AT3G29410.2 | 39.692 | 325 | 192 | 3 | 59 | 381 | 1 | 323 | 2.71e-75 | 242 |
| Msa0920820 | AT3G32030.1 | 36.088 | 363 | 225 | 5 | 22 | 380 | 68 | 427 | 1.40e-74 | 243 |
| Msa0920820 | AT2G23230.2 | 37.701 | 374 | 219 | 8 | 16 | 380 | 55 | 423 | 7.98e-73 | 238 |
| Msa0920820 | AT2G23230.1 | 37.838 | 370 | 216 | 8 | 16 | 376 | 55 | 419 | 3.61e-72 | 236 |
| Msa0920820 | AT4G13300.1 | 36.915 | 363 | 219 | 6 | 25 | 381 | 20 | 378 | 3.78e-72 | 235 |
| Msa0920820 | AT4G16730.1 | 36.512 | 367 | 214 | 7 | 28 | 382 | 2 | 361 | 6.41e-72 | 234 |
| Msa0920820 | AT4G16740.2 | 35.079 | 382 | 226 | 9 | 12 | 381 | 21 | 392 | 1.17e-71 | 229 |
| Msa0920820 | AT3G29110.1 | 37.950 | 361 | 215 | 8 | 17 | 371 | 55 | 412 | 1.47e-71 | 234 |
| Msa0920820 | AT4G20200.1 | 37.353 | 340 | 201 | 6 | 48 | 379 | 92 | 427 | 1.91e-71 | 234 |
| Msa0920820 | AT3G29190.1 | 36.471 | 340 | 208 | 5 | 48 | 381 | 89 | 426 | 1.95e-71 | 234 |
| Msa0920820 | AT1G66020.2 | 35.150 | 367 | 229 | 6 | 17 | 377 | 56 | 419 | 3.99e-70 | 226 |
| Msa0920820 | AT4G20230.1 | 36.858 | 331 | 197 | 6 | 48 | 370 | 92 | 418 | 1.43e-69 | 229 |
| Msa0920820 | AT4G20230.2 | 36.858 | 331 | 197 | 6 | 48 | 370 | 104 | 430 | 2.14e-69 | 229 |
| Msa0920820 | AT4G16740.1 | 34.840 | 376 | 224 | 8 | 12 | 376 | 21 | 386 | 1.50e-68 | 226 |
| Msa0920820 | AT1G66020.1 | 34.595 | 370 | 233 | 6 | 17 | 380 | 56 | 422 | 3.44e-68 | 226 |
| Msa0920820 | AT4G16730.2 | 37.695 | 321 | 183 | 5 | 73 | 382 | 1 | 315 | 4.96e-68 | 223 |
| Msa0920820 | AT4G13280.1 | 36.565 | 361 | 219 | 6 | 27 | 381 | 22 | 378 | 1.49e-67 | 222 |
| Msa0920820 | AT4G13280.2 | 36.565 | 361 | 219 | 6 | 27 | 381 | 22 | 378 | 1.92e-67 | 223 |
| Msa0920820 | AT2G24210.1 | 35.200 | 375 | 227 | 7 | 10 | 376 | 39 | 405 | 3.68e-67 | 223 |
| Msa0920820 | AT1G48800.1 | 34.840 | 376 | 229 | 9 | 16 | 381 | 62 | 431 | 4.21e-63 | 213 |
| Msa0920820 | AT3G25820.2 | 33.803 | 355 | 211 | 8 | 15 | 357 | 45 | 387 | 7.82e-63 | 208 |
| Msa0920820 | AT3G25820.1 | 33.803 | 355 | 211 | 8 | 15 | 357 | 45 | 387 | 3.11e-61 | 207 |
| Msa0920820 | AT3G25830.1 | 33.803 | 355 | 211 | 8 | 15 | 357 | 45 | 387 | 3.11e-61 | 207 |
| Msa0920820 | AT4G16740.4 | 34.756 | 328 | 194 | 7 | 14 | 330 | 23 | 341 | 5.56e-59 | 196 |
| Msa0920820 | AT4G16740.3 | 34.756 | 328 | 194 | 7 | 14 | 330 | 23 | 341 | 5.56e-59 | 196 |
| Msa0920820 | AT1G48820.1 | 35.674 | 356 | 196 | 9 | 16 | 366 | 62 | 389 | 5.79e-59 | 201 |
| Msa0920820 | AT3G25810.1 | 35.548 | 301 | 177 | 6 | 63 | 352 | 93 | 387 | 6.81e-56 | 193 |
| Msa0920820 | AT3G25820.4 | 32.622 | 328 | 200 | 7 | 15 | 330 | 45 | 363 | 1.53e-54 | 185 |
| Msa0920820 | AT3G25820.3 | 32.622 | 328 | 200 | 7 | 15 | 330 | 45 | 363 | 1.53e-54 | 185 |
| Msa0920820 | AT1G61680.1 | 32.698 | 315 | 201 | 3 | 54 | 363 | 77 | 385 | 5.02e-51 | 179 |
| Msa0920820 | AT1G61680.2 | 32.063 | 315 | 196 | 4 | 54 | 363 | 77 | 378 | 1.13e-47 | 170 |
| Msa0920820 | AT5G48110.1 | 44.048 | 168 | 92 | 2 | 215 | 381 | 1 | 167 | 8.28e-43 | 152 |
| Msa0920820 | AT1G79460.1 | 28.097 | 331 | 196 | 12 | 70 | 369 | 274 | 593 | 2.55e-24 | 105 |
| Msa0920820 | AT4G02780.1 | 28.462 | 260 | 158 | 5 | 68 | 300 | 329 | 587 | 8.31e-23 | 100 |
| Msa0920820 | AT1G61120.1 | 27.097 | 310 | 194 | 7 | 68 | 356 | 286 | 584 | 2.76e-20 | 93.6 |
Find 62 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6_2:+56413130 | Msa0920820:CDS |
| TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6_2:+56414026 | Msa0920820:CDS |
| CACCCTTGACCCCTTCTTAA+AGG | 0.174209 | 6_2:+56414799 | Msa0920820:CDS |
| TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6_2:+56413131 | Msa0920820:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_2:-56414298 | None:intergenic |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6_2:+56413081 | Msa0920820:CDS |
| TCCTTATGCTTCAGAATCTA+TGG | 0.272455 | 6_2:+56412521 | Msa0920820:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.272756 | 6_2:-56414340 | None:intergenic |
| AGCCTGCATCAAAAGGAATT+TGG | 0.290423 | 6_2:+56414066 | Msa0920820:CDS |
| AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6_2:+56413050 | Msa0920820:CDS |
| CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6_2:+56412484 | Msa0920820:CDS |
| AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6_2:+56412485 | Msa0920820:CDS |
| TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6_2:-56412450 | None:intergenic |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_2:+56414694 | Msa0920820:CDS |
| TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6_2:-56413738 | None:intergenic |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_2:+56414253 | Msa0920820:CDS |
| TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6_2:-56412910 | None:intergenic |
| CTGTGCTATTTAGGGTGTTA+AGG | 0.361426 | 6_2:+56413139 | Msa0920820:CDS |
| CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6_2:+56412443 | Msa0920820:CDS |
| AACTCTTACTTCCTTTAAGA+AGG | 0.385301 | 6_2:-56414810 | None:intergenic |
| GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6_2:+56413008 | Msa0920820:CDS |
| TGATGAATCTTGCTCATAGA+TGG | 0.392107 | 6_2:-56413992 | None:intergenic |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_2:+56414727 | Msa0920820:CDS |
| TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6_2:-56414713 | None:intergenic |
| TTCTGGTCACCTTGAGTCCA+TGG | 0.446304 | 6_2:+56413870 | Msa0920820:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_2:+56414682 | Msa0920820:intron |
| GATGACACTTACGATGCATA+TGG | 0.455602 | 6_2:+56414357 | Msa0920820:CDS |
| GCTCCAAAGCCTGCATCAAA+AGG | 0.461740 | 6_2:+56414059 | Msa0920820:CDS |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_2:+56414767 | Msa0920820:CDS |
| ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6_2:+56413009 | Msa0920820:CDS |
| TAATGAAATTCTACTTGCAT+TGG | 0.478879 | 6_2:+56414017 | Msa0920820:CDS |
| ACTCTTACTTCCTTTAAGAA+GGG | 0.487114 | 6_2:-56414809 | None:intergenic |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_2:-56414283 | None:intergenic |
| CTTCCTTTAAGAAGGGGTCA+AGG | 0.498434 | 6_2:-56414802 | None:intergenic |
| CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6_2:+56413165 | Msa0920820:CDS |
| ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6_2:+56414197 | Msa0920820:intron |
| AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6_2:+56413726 | Msa0920820:intron |
| ACCATAGATTCTGAAGCATA+AGG | 0.518574 | 6_2:-56412522 | None:intergenic |
| AGGACTCAATCGTGTGGCCA+TGG | 0.520582 | 6_2:-56413887 | None:intergenic |
| TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6_2:-56413964 | None:intergenic |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6_2:+56413814 | Msa0920820:CDS |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_2:+56414685 | Msa0920820:CDS |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_2:-56414297 | None:intergenic |
| CTCTTACTTCCTTTAAGAAG+GGG | 0.539589 | 6_2:-56414808 | None:intergenic |
| AACATTGGTCGTAGATGTTG+AGG | 0.541350 | 6_2:+56413771 | Msa0920820:CDS |
| TTCCTTTAAGAAGGGGTCAA+GGG | 0.543212 | 6_2:-56414801 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_2:+56414295 | Msa0920820:CDS |
| TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6_2:-56413907 | None:intergenic |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6_2:+56413807 | Msa0920820:CDS |
| ATCGTGTGGCCATGGACTCA+AGG | 0.569017 | 6_2:-56413879 | None:intergenic |
| ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6_2:-56413125 | None:intergenic |
| CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6_2:+56414191 | Msa0920820:intron |
| AGGAAACTTCAGTGAAACAT+TGG | 0.587870 | 6_2:+56413756 | Msa0920820:CDS |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_2:-56414237 | None:intergenic |
| GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6_2:+56412486 | Msa0920820:CDS |
| TTTAGGGTGTTAAGGCAACA+TGG | 0.599299 | 6_2:+56413147 | Msa0920820:CDS |
| AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6_2:-56412491 | None:intergenic |
| AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6_2:+56413736 | Msa0920820:CDS |
| ACATTGGTCGTAGATGTTGA+GGG | 0.633793 | 6_2:+56413772 | Msa0920820:CDS |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6_2:-56413815 | None:intergenic |
| AAGAGAAGGACTCAATCGTG+TGG | 0.693305 | 6_2:-56413893 | None:intergenic |
| GGAACCTGATATGAATACTG+CGG | 0.696636 | 6_2:+56412906 | Msa0920820:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTATGTTTTTAATT+TGG | + | chr6_2:56413221-56413240 | Msa0920820:intron | 10.0% |
| !! | GAAAAAATATTACATAAAAT+AGG | + | chr6_2:56413414-56413433 | Msa0920820:intron | 10.0% |
| !!! | CATTTTTTATGTTTTTAATT+TGG | + | chr6_2:56413221-56413240 | Msa0920820:intron | 10.0% |
| !! | GAAAAAATATTACATAAAAT+AGG | + | chr6_2:56413414-56413433 | Msa0920820:intron | 10.0% |
| !! | AAAAAAAAAAAGACCATTTA+AGG | - | chr6_2:56412630-56412649 | None:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTAAA+AGG | - | chr6_2:56412768-56412787 | None:intergenic | 15.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | + | chr6_2:56412930-56412949 | Msa0920820:CDS | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | + | chr6_2:56413685-56413704 | Msa0920820:intron | 15.0% |
| !! | TATAAAGACAAAAATAGTAT+AGG | - | chr6_2:56414178-56414197 | None:intergenic | 15.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | - | chr6_2:56414472-56414491 | None:intergenic | 15.0% |
| !!! | TTGAAATCAAAATGATTTTT+AGG | + | chr6_2:56414663-56414682 | Msa0920820:intron | 15.0% |
| !! | AAAAAAAAAAAGACCATTTA+AGG | - | chr6_2:56412630-56412649 | None:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTAAA+AGG | - | chr6_2:56412768-56412787 | None:intergenic | 15.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | + | chr6_2:56412930-56412949 | Msa0920820:CDS | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | + | chr6_2:56413685-56413704 | Msa0920820:intron | 15.0% |
| !! | TATAAAGACAAAAATAGTAT+AGG | - | chr6_2:56414178-56414197 | None:intergenic | 15.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | - | chr6_2:56414472-56414491 | None:intergenic | 15.0% |
| !!! | TTGAAATCAAAATGATTTTT+AGG | + | chr6_2:56414663-56414682 | Msa0920820:intron | 15.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | + | chr6_2:56412933-56412952 | Msa0920820:CDS | 20.0% |
| !! | TTGAGTAAAACAAATTAGAT+TGG | + | chr6_2:56413252-56413271 | Msa0920820:intron | 20.0% |
| !!! | AATTCTCTTTTTACTAAAAG+TGG | - | chr6_2:56413375-56413394 | None:intergenic | 20.0% |
| !! | TGATCGTAAAGTAATATTAA+TGG | + | chr6_2:56413503-56413522 | Msa0920820:intron | 20.0% |
| !!! | CTATTTTTGTCTTTATATAC+AGG | + | chr6_2:56414181-56414200 | Msa0920820:intron | 20.0% |
| !!! | TTCTTTTAACAATAGAGTAA+TGG | + | chr6_2:56414634-56414653 | Msa0920820:intron | 20.0% |
| !!! | AAATCAAAATGATTTTTAGG+TGG | + | chr6_2:56414666-56414685 | Msa0920820:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | chr6_2:56414667-56414686 | Msa0920820:intron | 20.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | + | chr6_2:56412933-56412952 | Msa0920820:CDS | 20.0% |
| !! | TTGAGTAAAACAAATTAGAT+TGG | + | chr6_2:56413252-56413271 | Msa0920820:intron | 20.0% |
| !!! | AATTCTCTTTTTACTAAAAG+TGG | - | chr6_2:56413375-56413394 | None:intergenic | 20.0% |
| !! | TGATCGTAAAGTAATATTAA+TGG | + | chr6_2:56413503-56413522 | Msa0920820:intron | 20.0% |
| !!! | CTATTTTTGTCTTTATATAC+AGG | + | chr6_2:56414181-56414200 | Msa0920820:intron | 20.0% |
| !!! | TTCTTTTAACAATAGAGTAA+TGG | + | chr6_2:56414634-56414653 | Msa0920820:intron | 20.0% |
| !!! | AAATCAAAATGATTTTTAGG+TGG | + | chr6_2:56414666-56414685 | Msa0920820:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | chr6_2:56414667-56414686 | Msa0920820:intron | 20.0% |
| ! | AATTCTTTAAATCAACAGCA+AGG | + | chr6_2:56412549-56412568 | Msa0920820:intron | 25.0% |
| !! | ATGACACTTAATTGTTGTTA+TGG | - | chr6_2:56412841-56412860 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | chr6_2:56413050-56413069 | Msa0920820:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | chr6_2:56413081-56413100 | Msa0920820:CDS | 25.0% |
| !! | TAAGTTGAGATATATATACC+AGG | - | chr6_2:56413186-56413205 | None:intergenic | 25.0% |
| !! | GTAATATTTGACTTTGTCAA+GGG | + | chr6_2:56413316-56413335 | Msa0920820:intron | 25.0% |
| ! | TGATATGAATGCCTAATAAA+TGG | + | chr6_2:56413345-56413364 | Msa0920820:intron | 25.0% |
| ! | AAAGTGGTATACCATTTATT+AGG | - | chr6_2:56413359-56413378 | None:intergenic | 25.0% |
| ! | GAGAATAATTAAAAGAGATG+AGG | - | chr6_2:56413467-56413486 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | chr6_2:56414017-56414036 | Msa0920820:CDS | 25.0% |
| !! | TTTTTGTCTTTATATACAGG+TGG | + | chr6_2:56414184-56414203 | Msa0920820:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | chr6_2:56414343-56414362 | None:intergenic | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | + | chr6_2:56414501-56414520 | Msa0920820:intron | 25.0% |
| ! | AATTTATCCATCTTCAATCT+TGG | + | chr6_2:56414546-56414565 | Msa0920820:intron | 25.0% |
| ! | AATTCTTTAAATCAACAGCA+AGG | + | chr6_2:56412549-56412568 | Msa0920820:intron | 25.0% |
| !! | ATGACACTTAATTGTTGTTA+TGG | - | chr6_2:56412841-56412860 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | chr6_2:56413050-56413069 | Msa0920820:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | chr6_2:56413081-56413100 | Msa0920820:CDS | 25.0% |
| !! | TAAGTTGAGATATATATACC+AGG | - | chr6_2:56413186-56413205 | None:intergenic | 25.0% |
| !! | GTAATATTTGACTTTGTCAA+GGG | + | chr6_2:56413316-56413335 | Msa0920820:intron | 25.0% |
| ! | TGATATGAATGCCTAATAAA+TGG | + | chr6_2:56413345-56413364 | Msa0920820:intron | 25.0% |
| ! | AAAGTGGTATACCATTTATT+AGG | - | chr6_2:56413359-56413378 | None:intergenic | 25.0% |
| ! | GAGAATAATTAAAAGAGATG+AGG | - | chr6_2:56413467-56413486 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | chr6_2:56414017-56414036 | Msa0920820:CDS | 25.0% |
| !! | TTTTTGTCTTTATATACAGG+TGG | + | chr6_2:56414184-56414203 | Msa0920820:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | chr6_2:56414343-56414362 | None:intergenic | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | + | chr6_2:56414501-56414520 | Msa0920820:intron | 25.0% |
| ! | AATTTATCCATCTTCAATCT+TGG | + | chr6_2:56414546-56414565 | Msa0920820:intron | 25.0% |
| CATCAATCCTAATGAGAAAT+CGG | + | chr6_2:56412443-56412462 | Msa0920820:CDS | 30.0% | |
| ATGAAAAGTGATTGAAGAGT+AGG | + | chr6_2:56412583-56412602 | Msa0920820:intron | 30.0% | |
| ACGCATAACAAAACCTTAAA+TGG | + | chr6_2:56412614-56412633 | Msa0920820:intron | 30.0% | |
| GGAATGAAACTTGATATTCT+TGG | + | chr6_2:56412660-56412679 | Msa0920820:intron | 30.0% | |
| GGCTAATAATATTAAGTGGT+TGG | - | chr6_2:56412721-56412740 | None:intergenic | 30.0% | |
| TGTTGTTATGGATCAACTTA+TGG | - | chr6_2:56412829-56412848 | None:intergenic | 30.0% | |
| !! | TGCATGTTTTGAATACATAC+AGG | + | chr6_2:56412885-56412904 | Msa0920820:intron | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | - | chr6_2:56412991-56413010 | None:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | - | chr6_2:56412992-56413011 | None:intergenic | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | chr6_2:56413009-56413028 | Msa0920820:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+AGG | + | chr6_2:56413315-56413334 | Msa0920820:intron | 30.0% |
| !! | GTGTTTCTGAAGTACAAAAA+AGG | - | chr6_2:56413558-56413577 | None:intergenic | 30.0% |
| GGTTCATGGTGAAAAAATAT+TGG | + | chr6_2:56413828-56413847 | Msa0920820:CDS | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | chr6_2:56413834-56413853 | Msa0920820:CDS | 30.0% | |
| AAAAATATTGGAAGAGGCTT+TGG | + | chr6_2:56413840-56413859 | Msa0920820:CDS | 30.0% | |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | + | chr6_2:56414254-56414273 | Msa0920820:CDS | 30.0% |
| ATATTGGGGCTCAAAATATA+CGG | - | chr6_2:56414286-56414305 | None:intergenic | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | chr6_2:56414301-56414320 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | - | chr6_2:56414302-56414321 | None:intergenic | 30.0% |
| !! | TGAATTAGAACTTTTGACTC+AGG | + | chr6_2:56414389-56414408 | Msa0920820:CDS | 30.0% |
| TAAAGCAACTTCATGTAATC+CGG | - | chr6_2:56414716-56414735 | None:intergenic | 30.0% | |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | chr6_2:56414727-56414746 | Msa0920820:CDS | 30.0% |
| ! | ACTCTTACTTCCTTTAAGAA+GGG | - | chr6_2:56414812-56414831 | None:intergenic | 30.0% |
| ! | AACTCTTACTTCCTTTAAGA+AGG | - | chr6_2:56414813-56414832 | None:intergenic | 30.0% |
| CATCAATCCTAATGAGAAAT+CGG | + | chr6_2:56412443-56412462 | Msa0920820:CDS | 30.0% | |
| ATGAAAAGTGATTGAAGAGT+AGG | + | chr6_2:56412583-56412602 | Msa0920820:intron | 30.0% | |
| ACGCATAACAAAACCTTAAA+TGG | + | chr6_2:56412614-56412633 | Msa0920820:intron | 30.0% | |
| GGAATGAAACTTGATATTCT+TGG | + | chr6_2:56412660-56412679 | Msa0920820:intron | 30.0% | |
| GGCTAATAATATTAAGTGGT+TGG | - | chr6_2:56412721-56412740 | None:intergenic | 30.0% | |
| TGTTGTTATGGATCAACTTA+TGG | - | chr6_2:56412829-56412848 | None:intergenic | 30.0% | |
| !! | TGCATGTTTTGAATACATAC+AGG | + | chr6_2:56412885-56412904 | Msa0920820:intron | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | - | chr6_2:56412991-56413010 | None:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | - | chr6_2:56412992-56413011 | None:intergenic | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | chr6_2:56413009-56413028 | Msa0920820:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+AGG | + | chr6_2:56413315-56413334 | Msa0920820:intron | 30.0% |
| !! | GTGTTTCTGAAGTACAAAAA+AGG | - | chr6_2:56413558-56413577 | None:intergenic | 30.0% |
| GGTTCATGGTGAAAAAATAT+TGG | + | chr6_2:56413828-56413847 | Msa0920820:CDS | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | chr6_2:56413834-56413853 | Msa0920820:CDS | 30.0% | |
| AAAAATATTGGAAGAGGCTT+TGG | + | chr6_2:56413840-56413859 | Msa0920820:CDS | 30.0% | |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | + | chr6_2:56414254-56414273 | Msa0920820:CDS | 30.0% |
| ATATTGGGGCTCAAAATATA+CGG | - | chr6_2:56414286-56414305 | None:intergenic | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | chr6_2:56414301-56414320 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | - | chr6_2:56414302-56414321 | None:intergenic | 30.0% |
| !! | TGAATTAGAACTTTTGACTC+AGG | + | chr6_2:56414389-56414408 | Msa0920820:CDS | 30.0% |
| TAAAGCAACTTCATGTAATC+CGG | - | chr6_2:56414716-56414735 | None:intergenic | 30.0% | |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | chr6_2:56414727-56414746 | Msa0920820:CDS | 30.0% |
| ! | ACTCTTACTTCCTTTAAGAA+GGG | - | chr6_2:56414812-56414831 | None:intergenic | 30.0% |
| ! | AACTCTTACTTCCTTTAAGA+AGG | - | chr6_2:56414813-56414832 | None:intergenic | 30.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | chr6_2:56412453-56412472 | None:intergenic | 35.0% |
| TCCTTATGCTTCAGAATCTA+TGG | + | chr6_2:56412521-56412540 | Msa0920820:CDS | 35.0% | |
| !! | ACCATAGATTCTGAAGCATA+AGG | - | chr6_2:56412525-56412544 | None:intergenic | 35.0% |
| CCTGGGCTAATAATATTAAG+TGG | - | chr6_2:56412725-56412744 | None:intergenic | 35.0% | |
| CCACTTAATATTATTAGCCC+AGG | + | chr6_2:56412722-56412741 | Msa0920820:intron | 35.0% | |
| ATGAGAGTAACTTGAATCCT+GGG | - | chr6_2:56412742-56412761 | None:intergenic | 35.0% | |
| AATGAGAGTAACTTGAATCC+TGG | - | chr6_2:56412743-56412762 | None:intergenic | 35.0% | |
| ! | GATTGACTCAATATGTCGTT+TGG | + | chr6_2:56413008-56413027 | Msa0920820:CDS | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | + | chr6_2:56413130-56413149 | Msa0920820:CDS | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | + | chr6_2:56413131-56413150 | Msa0920820:CDS | 35.0% |
| AGATGTGTTCAACCAATTCA+AGG | + | chr6_2:56413726-56413745 | Msa0920820:intron | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | + | chr6_2:56413756-56413775 | Msa0920820:CDS | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | chr6_2:56413910-56413929 | None:intergenic | 35.0% | |
| TGATGAATCTTGCTCATAGA+TGG | - | chr6_2:56413995-56414014 | None:intergenic | 35.0% | |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | chr6_2:56414026-56414045 | Msa0920820:CDS | 35.0% |
| ! | TTCCAAATTCCTTTTGATGC+AGG | - | chr6_2:56414071-56414090 | None:intergenic | 35.0% |
| TTGTCTTTATATACAGGTGG+TGG | + | chr6_2:56414187-56414206 | Msa0920820:intron | 35.0% | |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | + | chr6_2:56414253-56414272 | Msa0920820:CDS | 35.0% |
| TTCCTTGCTTGAGAATATTG+GGG | - | chr6_2:56414300-56414319 | None:intergenic | 35.0% | |
| !! | TTTTGACTCAGGCAATTGAA+AGG | + | chr6_2:56414400-56414419 | Msa0920820:CDS | 35.0% |
| ! | TCTTCACAAGTTTTTGTACG+CGG | + | chr6_2:56414606-56414625 | Msa0920820:intron | 35.0% |
| TAGGTGGGATATTAATTGCT+TGG | + | chr6_2:56414682-56414701 | Msa0920820:intron | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | + | chr6_2:56414767-56414786 | Msa0920820:CDS | 35.0% | |
| ! | CTCTTACTTCCTTTAAGAAG+GGG | - | chr6_2:56414811-56414830 | None:intergenic | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | chr6_2:56412453-56412472 | None:intergenic | 35.0% |
| TCCTTATGCTTCAGAATCTA+TGG | + | chr6_2:56412521-56412540 | Msa0920820:CDS | 35.0% | |
| !! | ACCATAGATTCTGAAGCATA+AGG | - | chr6_2:56412525-56412544 | None:intergenic | 35.0% |
| CCTGGGCTAATAATATTAAG+TGG | - | chr6_2:56412725-56412744 | None:intergenic | 35.0% | |
| CCACTTAATATTATTAGCCC+AGG | + | chr6_2:56412722-56412741 | Msa0920820:intron | 35.0% | |
| ATGAGAGTAACTTGAATCCT+GGG | - | chr6_2:56412742-56412761 | None:intergenic | 35.0% | |
| AATGAGAGTAACTTGAATCC+TGG | - | chr6_2:56412743-56412762 | None:intergenic | 35.0% | |
| ! | GATTGACTCAATATGTCGTT+TGG | + | chr6_2:56413008-56413027 | Msa0920820:CDS | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | + | chr6_2:56413130-56413149 | Msa0920820:CDS | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | + | chr6_2:56413131-56413150 | Msa0920820:CDS | 35.0% |
| AGATGTGTTCAACCAATTCA+AGG | + | chr6_2:56413726-56413745 | Msa0920820:intron | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | + | chr6_2:56413756-56413775 | Msa0920820:CDS | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | chr6_2:56413910-56413929 | None:intergenic | 35.0% | |
| TGATGAATCTTGCTCATAGA+TGG | - | chr6_2:56413995-56414014 | None:intergenic | 35.0% | |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | chr6_2:56414026-56414045 | Msa0920820:CDS | 35.0% |
| ! | TTCCAAATTCCTTTTGATGC+AGG | - | chr6_2:56414071-56414090 | None:intergenic | 35.0% |
| TTGTCTTTATATACAGGTGG+TGG | + | chr6_2:56414187-56414206 | Msa0920820:intron | 35.0% | |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | + | chr6_2:56414253-56414272 | Msa0920820:CDS | 35.0% |
| TTCCTTGCTTGAGAATATTG+GGG | - | chr6_2:56414300-56414319 | None:intergenic | 35.0% | |
| !! | TTTTGACTCAGGCAATTGAA+AGG | + | chr6_2:56414400-56414419 | Msa0920820:CDS | 35.0% |
| ! | TCTTCACAAGTTTTTGTACG+CGG | + | chr6_2:56414606-56414625 | Msa0920820:intron | 35.0% |
| TAGGTGGGATATTAATTGCT+TGG | + | chr6_2:56414682-56414701 | Msa0920820:intron | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | + | chr6_2:56414767-56414786 | Msa0920820:CDS | 35.0% | |
| ! | CTCTTACTTCCTTTAAGAAG+GGG | - | chr6_2:56414811-56414830 | None:intergenic | 35.0% |
| AAAAATCTCCCCAAACGCTA+GGG | - | chr6_2:56412497-56412516 | None:intergenic | 40.0% | |
| AAAAAATCTCCCCAAACGCT+AGG | - | chr6_2:56412498-56412517 | None:intergenic | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | chr6_2:56412906-56412925 | Msa0920820:intron | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | + | chr6_2:56412972-56412991 | Msa0920820:CDS | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | - | chr6_2:56413128-56413147 | None:intergenic | 40.0% | |
| !! | CTGTGCTATTTAGGGTGTTA+AGG | + | chr6_2:56413139-56413158 | Msa0920820:CDS | 40.0% |
| ! | TTTAGGGTGTTAAGGCAACA+TGG | + | chr6_2:56413147-56413166 | Msa0920820:CDS | 40.0% |
| AACATTGGTCGTAGATGTTG+AGG | + | chr6_2:56413771-56413790 | Msa0920820:CDS | 40.0% | |
| ACATTGGTCGTAGATGTTGA+GGG | + | chr6_2:56413772-56413791 | Msa0920820:CDS | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | chr6_2:56413807-56413826 | Msa0920820:CDS | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | chr6_2:56413818-56413837 | None:intergenic | 40.0% | |
| ! | ATTCCTTTTGATGCAGGCTT+TGG | - | chr6_2:56414065-56414084 | None:intergenic | 40.0% |
| AGCCTGCATCAAAAGGAATT+TGG | + | chr6_2:56414066-56414085 | Msa0920820:CDS | 40.0% | |
| !! | CTTTATATACAGGTGGTGGA+AGG | + | chr6_2:56414191-56414210 | Msa0920820:intron | 40.0% |
| ACTACTCTATCTCGTGCATA+CGG | - | chr6_2:56414240-56414259 | None:intergenic | 40.0% | |
| GATGACACTTACGATGCATA+TGG | + | chr6_2:56414357-56414376 | Msa0920820:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | - | chr6_2:56414556-56414575 | None:intergenic | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | chr6_2:56414685-56414704 | Msa0920820:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | + | chr6_2:56414694-56414713 | Msa0920820:CDS | 40.0% | |
| ! | TTCCTTTAAGAAGGGGTCAA+GGG | - | chr6_2:56414804-56414823 | None:intergenic | 40.0% |
| AAAAATCTCCCCAAACGCTA+GGG | - | chr6_2:56412497-56412516 | None:intergenic | 40.0% | |
| AAAAAATCTCCCCAAACGCT+AGG | - | chr6_2:56412498-56412517 | None:intergenic | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | chr6_2:56412906-56412925 | Msa0920820:intron | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | + | chr6_2:56412972-56412991 | Msa0920820:CDS | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | - | chr6_2:56413128-56413147 | None:intergenic | 40.0% | |
| !! | CTGTGCTATTTAGGGTGTTA+AGG | + | chr6_2:56413139-56413158 | Msa0920820:CDS | 40.0% |
| ! | TTTAGGGTGTTAAGGCAACA+TGG | + | chr6_2:56413147-56413166 | Msa0920820:CDS | 40.0% |
| AACATTGGTCGTAGATGTTG+AGG | + | chr6_2:56413771-56413790 | Msa0920820:CDS | 40.0% | |
| ACATTGGTCGTAGATGTTGA+GGG | + | chr6_2:56413772-56413791 | Msa0920820:CDS | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | chr6_2:56413807-56413826 | Msa0920820:CDS | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | chr6_2:56413818-56413837 | None:intergenic | 40.0% | |
| ! | ATTCCTTTTGATGCAGGCTT+TGG | - | chr6_2:56414065-56414084 | None:intergenic | 40.0% |
| AGCCTGCATCAAAAGGAATT+TGG | + | chr6_2:56414066-56414085 | Msa0920820:CDS | 40.0% | |
| !! | CTTTATATACAGGTGGTGGA+AGG | + | chr6_2:56414191-56414210 | Msa0920820:intron | 40.0% |
| ACTACTCTATCTCGTGCATA+CGG | - | chr6_2:56414240-56414259 | None:intergenic | 40.0% | |
| GATGACACTTACGATGCATA+TGG | + | chr6_2:56414357-56414376 | Msa0920820:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | - | chr6_2:56414556-56414575 | None:intergenic | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | chr6_2:56414685-56414704 | Msa0920820:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | + | chr6_2:56414694-56414713 | Msa0920820:CDS | 40.0% | |
| ! | TTCCTTTAAGAAGGGGTCAA+GGG | - | chr6_2:56414804-56414823 | None:intergenic | 40.0% |
| AGATTTCCACCCTAGCGTTT+GGG | + | chr6_2:56412485-56412504 | Msa0920820:CDS | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | chr6_2:56412913-56412932 | None:intergenic | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | + | chr6_2:56413165-56413184 | Msa0920820:CDS | 45.0% | |
| AACCAATTCAAGGACGAGCA+AGG | + | chr6_2:56413736-56413755 | Msa0920820:CDS | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | chr6_2:56413741-56413760 | None:intergenic | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | chr6_2:56413814-56413833 | Msa0920820:CDS | 45.0% | |
| !!! | GAGGCTTTGGCTTTTACTTC+TGG | + | chr6_2:56413853-56413872 | Msa0920820:CDS | 45.0% |
| AAGAGAAGGACTCAATCGTG+TGG | - | chr6_2:56413896-56413915 | None:intergenic | 45.0% | |
| ! | CTAGCCTAGGCAAGTTTTTG+CGG | - | chr6_2:56413954-56413973 | None:intergenic | 45.0% |
| CAAAAACTTGCCTAGGCTAG+TGG | + | chr6_2:56413954-56413973 | Msa0920820:CDS | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | - | chr6_2:56413967-56413986 | None:intergenic | 45.0% |
| AGCCCCAATATTCTCAAGCA+AGG | + | chr6_2:56414295-56414314 | Msa0920820:CDS | 45.0% | |
| ! | CTTCCTTTAAGAAGGGGTCA+AGG | - | chr6_2:56414805-56414824 | None:intergenic | 45.0% |
| AGATTTCCACCCTAGCGTTT+GGG | + | chr6_2:56412485-56412504 | Msa0920820:CDS | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | chr6_2:56412913-56412932 | None:intergenic | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | + | chr6_2:56413165-56413184 | Msa0920820:CDS | 45.0% | |
| AACCAATTCAAGGACGAGCA+AGG | + | chr6_2:56413736-56413755 | Msa0920820:CDS | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | chr6_2:56413741-56413760 | None:intergenic | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | chr6_2:56413814-56413833 | Msa0920820:CDS | 45.0% | |
| !!! | GAGGCTTTGGCTTTTACTTC+TGG | + | chr6_2:56413853-56413872 | Msa0920820:CDS | 45.0% |
| AAGAGAAGGACTCAATCGTG+TGG | - | chr6_2:56413896-56413915 | None:intergenic | 45.0% | |
| ! | CTAGCCTAGGCAAGTTTTTG+CGG | - | chr6_2:56413954-56413973 | None:intergenic | 45.0% |
| CAAAAACTTGCCTAGGCTAG+TGG | + | chr6_2:56413954-56413973 | Msa0920820:CDS | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | - | chr6_2:56413967-56413986 | None:intergenic | 45.0% |
| AGCCCCAATATTCTCAAGCA+AGG | + | chr6_2:56414295-56414314 | Msa0920820:CDS | 45.0% | |
| ! | CTTCCTTTAAGAAGGGGTCA+AGG | - | chr6_2:56414805-56414824 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTATCAAT+AGG | + | chr6_2:56412639-56412658 | Msa0920820:intron | 5.0% |
| !!! | ATTTTATAATAATAAAAGAT+AGG | + | chr6_2:56413392-56413411 | Msa0920820:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTATCAAT+AGG | + | chr6_2:56412639-56412658 | Msa0920820:intron | 5.0% |
| !!! | ATTTTATAATAATAAAAGAT+AGG | + | chr6_2:56413392-56413411 | Msa0920820:intron | 5.0% |
| CAGATTTCCACCCTAGCGTT+TGG | + | chr6_2:56412484-56412503 | Msa0920820:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | chr6_2:56412486-56412505 | Msa0920820:CDS | 50.0% | |
| TTCTGGTCACCTTGAGTCCA+TGG | + | chr6_2:56413870-56413889 | Msa0920820:CDS | 50.0% | |
| CTCTCCGCAAAAACTTGCCT+AGG | + | chr6_2:56413947-56413966 | Msa0920820:CDS | 50.0% | |
| GCTCCAAAGCCTGCATCAAA+AGG | + | chr6_2:56414059-56414078 | Msa0920820:CDS | 50.0% | |
| !! | ATACAGGTGGTGGAAGGAGT+TGG | + | chr6_2:56414197-56414216 | Msa0920820:intron | 50.0% |
| CACCCTTGACCCCTTCTTAA+AGG | + | chr6_2:56414799-56414818 | Msa0920820:CDS | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | + | chr6_2:56412484-56412503 | Msa0920820:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | chr6_2:56412486-56412505 | Msa0920820:CDS | 50.0% | |
| TTCTGGTCACCTTGAGTCCA+TGG | + | chr6_2:56413870-56413889 | Msa0920820:CDS | 50.0% | |
| CTCTCCGCAAAAACTTGCCT+AGG | + | chr6_2:56413947-56413966 | Msa0920820:CDS | 50.0% | |
| GCTCCAAAGCCTGCATCAAA+AGG | + | chr6_2:56414059-56414078 | Msa0920820:CDS | 50.0% | |
| !! | ATACAGGTGGTGGAAGGAGT+TGG | + | chr6_2:56414197-56414216 | Msa0920820:intron | 50.0% |
| CACCCTTGACCCCTTCTTAA+AGG | + | chr6_2:56414799-56414818 | Msa0920820:CDS | 50.0% | |
| AATCTCCCCAAACGCTAGGG+TGG | - | chr6_2:56412494-56412513 | None:intergenic | 55.0% | |
| ATCGTGTGGCCATGGACTCA+AGG | - | chr6_2:56413882-56413901 | None:intergenic | 55.0% | |
| AGGACTCAATCGTGTGGCCA+TGG | - | chr6_2:56413890-56413909 | None:intergenic | 55.0% | |
| AATCTCCCCAAACGCTAGGG+TGG | - | chr6_2:56412494-56412513 | None:intergenic | 55.0% | |
| ATCGTGTGGCCATGGACTCA+AGG | - | chr6_2:56413882-56413901 | None:intergenic | 55.0% | |
| AGGACTCAATCGTGTGGCCA+TGG | - | chr6_2:56413890-56413909 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 56412426 | 56414847 | 56412426 | ID=Msa0920820;Name=Msa0920820 |
| chr6_2 | mRNA | 56412426 | 56414847 | 56412426 | ID=Msa0920820-mRNA-1;Parent=Msa0920820;Name=Msa0920820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|5|0|383 |
| chr6_2 | exon | 56412426 | 56412542 | 56412426 | ID=Msa0920820-mRNA-1:exon:8463;Parent=Msa0920820-mRNA-1 |
| chr6_2 | exon | 56412907 | 56413186 | 56412907 | ID=Msa0920820-mRNA-1:exon:8464;Parent=Msa0920820-mRNA-1 |
| chr6_2 | exon | 56413728 | 56414100 | 56413728 | ID=Msa0920820-mRNA-1:exon:8465;Parent=Msa0920820-mRNA-1 |
| chr6_2 | exon | 56414203 | 56414421 | 56414203 | ID=Msa0920820-mRNA-1:exon:8466;Parent=Msa0920820-mRNA-1 |
| chr6_2 | exon | 56414685 | 56414847 | 56414685 | ID=Msa0920820-mRNA-1:exon:8467;Parent=Msa0920820-mRNA-1 |
| chr6_2 | CDS | 56412426 | 56412542 | 56412426 | ID=Msa0920820-mRNA-1:cds;Parent=Msa0920820-mRNA-1 |
| chr6_2 | CDS | 56412907 | 56413186 | 56412907 | ID=Msa0920820-mRNA-1:cds;Parent=Msa0920820-mRNA-1 |
| chr6_2 | CDS | 56413728 | 56414100 | 56413728 | ID=Msa0920820-mRNA-1:cds;Parent=Msa0920820-mRNA-1 |
| chr6_2 | CDS | 56414203 | 56414421 | 56414203 | ID=Msa0920820-mRNA-1:cds;Parent=Msa0920820-mRNA-1 |
| chr6_2 | CDS | 56414685 | 56414847 | 56414685 | ID=Msa0920820-mRNA-1:cds;Parent=Msa0920820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
