AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0916310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0916310 MtrunA17_Chr7g0236991 69.604 556 166 1 1 556 1 553 0.0 823
Msa0916310 MtrunA17_Chr7g0237001 69.424 556 167 1 1 556 1 553 0.0 821
Msa0916310 MtrunA17_Chr7g0237041 69.424 556 167 1 1 556 1 553 0.0 821
Msa0916310 MtrunA17_Chr7g0237081 69.424 556 167 1 1 556 1 553 0.0 821
Msa0916310 MtrunA17_Chr7g0237051 69.424 556 167 1 1 556 1 553 0.0 821
Msa0916310 MtrunA17_Chr6g0466051 69.604 556 166 1 1 556 1 553 0.0 816
Msa0916310 MtrunA17_Chr6g0465911 69.424 556 167 1 1 556 1 553 0.0 814
Msa0916310 MtrunA17_Chr5g0425371 68.705 556 171 1 1 556 1 553 0.0 804
Msa0916310 MtrunA17_Chr6g0465441 67.626 556 177 1 1 556 1 553 0.0 795
Msa0916310 MtrunA17_Chr6g0451711 66.607 557 185 1 1 556 1 557 0.0 790
Msa0916310 MtrunA17_Chr3g0105071 66.607 557 185 1 1 556 1 557 0.0 781
Msa0916310 MtrunA17_Chr4g0024691 67.031 549 181 0 8 556 13 561 0.0 776
Msa0916310 MtrunA17_Chr6g0465851 70.463 518 153 0 39 556 1 518 0.0 770
Msa0916310 MtrunA17_Chr3g0082691 66.484 546 182 1 12 556 8 553 0.0 767
Msa0916310 MtrunA17_Chr5g0431571 67.279 544 177 1 12 554 4 547 0.0 755
Msa0916310 MtrunA17_Chr7g0236961 70.482 498 147 0 59 556 1 498 0.0 753
Msa0916310 MtrunA17_Chr7g0237011 70.482 498 147 0 59 556 1 498 0.0 752
Msa0916310 MtrunA17_Chr5g0431651 65.625 544 185 2 13 554 7 550 0.0 744
Msa0916310 MtrunA17_Chr4g0042111 57.810 557 232 2 2 556 7 562 0.0 671
Msa0916310 MtrunA17_Chr7g0236971 69.327 401 123 0 156 556 1 401 0.0 598
Msa0916310 MtrunA17_Chr6g0465981 71.809 376 103 1 1 376 1 373 0.0 562
Msa0916310 MtrunA17_Chr6g0465871 71.809 376 103 1 1 376 1 373 0.0 562
Msa0916310 MtrunA17_Chr6g0466081 71.809 376 103 1 1 376 1 373 0.0 562
Msa0916310 MtrunA17_Chr6g0466111 73.669 338 89 0 39 376 1 338 0.0 518
Msa0916310 MtrunA17_Chr6g0465931 73.373 338 90 0 39 376 1 338 0.0 515
Msa0916310 MtrunA17_Chr2g0319041 45.620 548 290 8 15 556 12 557 1.99e-174 504
Msa0916310 MtrunA17_Chr7g0236951 72.843 313 85 0 59 371 1 313 6.93e-171 486
Msa0916310 MtrunA17_Chr7g0237031 72.843 313 85 0 59 371 1 313 2.02e-170 485
Msa0916310 MtrunA17_Chr8g0336181 45.091 550 294 6 13 556 9 556 3.06e-170 494
Msa0916310 MtrunA17_Chr2g0319051 44.444 513 279 6 48 556 4 514 5.53e-162 471
Msa0916310 MtrunA17_Chr4g0008621 45.750 400 213 4 15 410 19 418 1.93e-123 370
Msa0916310 MtrunA17_Chr6g0466031 65.385 260 90 0 297 556 1 260 4.89e-122 359
Msa0916310 MtrunA17_Chr4g0023911 34.982 546 344 4 13 554 41 579 5.96e-115 353
Msa0916310 MtrunA17_Chr2g0319071 37.154 506 268 10 53 554 28 487 1.55e-113 346
Msa0916310 MtrunA17_Chr5g0445511 66.946 239 79 0 151 389 1 239 1.70e-113 337
Msa0916310 MtrunA17_Chr7g0237061 61.538 260 77 2 297 556 1 237 3.30e-108 323
Msa0916310 MtrunA17_Chr2g0310331 36.900 542 328 9 17 554 53 584 4.82e-107 333
Msa0916310 MtrunA17_Chr2g0323131 34.834 511 314 7 49 554 67 563 9.26e-104 323
Msa0916310 MtrunA17_Chr2g0323151 36.306 471 285 4 68 534 1 460 7.95e-103 318
Msa0916310 MtrunA17_Chr6g0466021 70.588 204 57 1 1 204 1 201 2.11e-99 299
Msa0916310 MtrunA17_Chr7g0237071 70.297 202 60 0 59 260 1 202 8.25e-97 293
Msa0916310 MtrunA17_Chr8g0357411 33.273 550 358 5 7 554 45 587 1.09e-96 306
Msa0916310 MtrunA17_Chr4g0048921 33.268 511 328 6 44 550 64 565 2.18e-88 283
Msa0916310 MtrunA17_Chr7g0237021 68.605 172 54 0 385 556 1 172 7.53e-85 261
Msa0916310 MtrunA17_Chr7g0236941 68.605 172 54 0 385 556 1 172 7.53e-85 261
Msa0916310 MtrunA17_Chr4g0048911 30.827 532 351 9 25 548 34 556 6.89e-82 266
Msa0916310 MtrunA17_Chr6g0465941 64.535 172 61 0 385 556 1 172 2.94e-78 244
Msa0916310 MtrunA17_Chr6g0466121 64.535 172 61 0 385 556 1 172 2.94e-78 244
Msa0916310 MtrunA17_Chr6g0465991 64.535 172 61 0 385 556 1 172 2.94e-78 244
Msa0916310 MtrunA17_Chr6g0466091 64.535 172 61 0 385 556 1 172 2.94e-78 244
Msa0916310 MtrunA17_Chr6g0465881 63.953 172 62 0 385 556 1 172 1.65e-77 242
Msa0916310 MtrunA17_Chr2g0319081 39.755 327 175 8 233 556 120 427 1.31e-75 246
Msa0916310 MtrunA17_Chr2g0319081 40.164 122 72 1 15 135 19 140 7.12e-23 101
Msa0916310 MtrunA17_Chr5g0445501 61.628 172 66 0 385 556 1 172 5.49e-74 233
Msa0916310 MtrunA17_Chr2g0280581 29.151 518 342 8 47 547 9 518 5.11e-72 239
Msa0916310 MtrunA17_Chr2g0310401 32.944 428 282 4 130 554 5 430 1.55e-71 235
Msa0916310 MtrunA17_Chr7g0236921 63.924 158 53 1 403 556 1 158 8.65e-70 221
Msa0916310 MtrunA17_Chr3g0108941 29.505 505 344 9 54 550 13 513 3.88e-69 231
Msa0916310 MtrunA17_Chr3g0105691 30.185 487 333 6 54 534 46 531 2.24e-68 230
Msa0916310 MtrunA17_Chr3g0109031 29.897 485 327 8 54 529 13 493 7.45e-68 228
Msa0916310 MtrunA17_Chr3g0109001 30.041 486 326 8 54 529 13 494 1.30e-67 227
Msa0916310 MtrunA17_Chr3g0109021 30.103 485 326 8 54 529 13 493 2.93e-67 226
Msa0916310 MtrunA17_Chr3g0099031 29.762 504 343 9 54 550 13 512 1.73e-66 224
Msa0916310 MtrunA17_Chr6g0477111 29.314 481 328 7 68 539 1 478 1.04e-65 221
Msa0916310 MtrunA17_Chr3g0108981 29.512 471 321 5 68 529 1 469 3.43e-65 220
Msa0916310 MtrunA17_Chr3g0108961 29.512 471 321 5 68 529 1 469 3.43e-65 220
Msa0916310 MtrunA17_Chr3g0108991 29.400 483 332 8 54 529 13 493 5.59e-65 220
Msa0916310 MtrunA17_Chr3g0108951 29.400 483 332 8 54 529 13 493 5.59e-65 220
Msa0916310 MtrunA17_Chr7g0236931 61.039 154 57 1 403 556 1 151 2.54e-64 207
Msa0916310 MtrunA17_Chr3g0108971 28.998 469 325 7 68 529 1 468 1.62e-63 216
Msa0916310 MtrunA17_Chr3g0109011 28.662 471 324 7 68 529 1 468 2.68e-62 213
Msa0916310 MtrunA17_Chr7g0236981 66.667 135 42 1 1 135 1 132 1.69e-58 191
Msa0916310 MtrunA17_Chr6g0477121 28.889 405 277 6 133 529 10 411 3.42e-56 194
Msa0916310 MtrunA17_Chr7g0233861 63.704 135 40 1 196 330 33 158 7.19e-52 175
Msa0916310 MtrunA17_Chr7g0217361 33.223 301 200 1 255 554 8 308 1.60e-49 173
Msa0916310 MtrunA17_Chr8g0357221 35.743 249 153 3 10 257 48 290 2.95e-40 147
Msa0916310 MtrunA17_Chr5g0445521 65.306 98 34 0 1 98 1 98 9.13e-40 140
Msa0916310 MtrunA17_Chr3g0101681 25.241 519 340 15 70 554 276 780 3.44e-36 144
Msa0916310 MtrunA17_Chr8g0357231 29.845 258 179 2 298 554 1 257 1.69e-34 131
Msa0916310 MtrunA17_Chr2g0310121 24.330 522 341 17 70 554 275 779 2.22e-34 138
Msa0916310 MtrunA17_Chr5g0445401 69.474 95 25 2 166 257 1 94 8.16e-33 120
Msa0916310 MtrunA17_Chr3g0082711 49.138 116 42 1 441 556 1 99 4.27e-32 119
Msa0916310 MtrunA17_Chr7g0259881 27.636 275 167 6 68 313 227 498 7.73e-24 105
Msa0916310 MtrunA17_Chr7g0218001 29.927 274 160 6 68 310 344 616 1.85e-23 105
Msa0916310 MtrunA17_Chr7g0217351 29.493 217 144 5 46 258 62 273 1.50e-20 92.4
Msa0916310 MtrunA17_Chr2g0281651 24.390 328 234 9 233 554 43 362 3.13e-19 90.1
Msa0916310 MtrunA17_Chr7g0218041 29.536 237 142 5 120 332 3 238 3.38e-14 74.7
Msa0916310 MtrunA17_Chr2g0310411 31.967 122 75 3 10 131 51 164 2.80e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0916310 AT5G23960.2 39.051 548 325 5 13 556 3 545 1.19e-144 428
Msa0916310 AT5G23960.1 39.020 551 323 7 13 556 3 547 1.40e-143 426
Msa0916310 AT1G70080.1 37.251 553 337 7 8 552 57 607 3.07e-130 394
Msa0916310 AT3G14490.1 38.026 547 327 7 17 556 60 601 2.95e-126 383
Msa0916310 AT3G14520.1 36.229 541 335 5 22 556 68 604 5.75e-124 377
Msa0916310 AT1G31950.3 36.131 548 327 6 22 556 70 607 1.43e-122 374
Msa0916310 AT1G31950.1 36.414 541 334 5 22 556 70 606 2.24e-122 373
Msa0916310 AT3G14540.1 36.481 540 335 4 22 556 65 601 2.25e-121 370
Msa0916310 AT3G29410.1 35.727 543 343 5 17 556 64 603 1.92e-117 360
Msa0916310 AT5G44630.1 36.147 545 337 8 18 554 14 555 8.44e-116 355
Msa0916310 AT1G33750.1 34.766 535 343 4 24 556 73 603 1.43e-115 355
Msa0916310 AT3G32030.1 34.259 540 347 6 22 556 68 604 6.09e-114 351
Msa0916310 AT4G20210.1 34.124 548 348 7 17 556 58 600 7.84e-114 351
Msa0916310 AT3G29410.2 36.200 500 315 3 59 556 1 498 1.04e-112 345
Msa0916310 AT4G13300.1 35.065 539 339 7 25 556 20 554 1.69e-111 343
Msa0916310 AT4G20200.1 35.521 518 320 8 48 556 92 604 1.16e-110 343
Msa0916310 AT4G15870.1 35.120 541 325 10 25 556 75 598 4.20e-107 333
Msa0916310 AT4G13280.2 34.451 537 341 7 27 556 22 554 2.03e-106 330
Msa0916310 AT3G29190.1 33.333 522 332 7 45 556 86 601 4.97e-105 328
Msa0916310 AT1G31950.2 37.149 463 268 6 22 471 70 522 2.92e-104 324
Msa0916310 AT3G14540.2 37.892 446 270 3 22 463 65 507 3.54e-104 323
Msa0916310 AT2G23230.2 33.818 550 349 9 16 555 55 599 1.25e-101 320
Msa0916310 AT4G20230.1 33.024 539 343 9 25 552 70 601 1.27e-101 319
Msa0916310 AT4G20230.2 33.024 539 343 9 25 552 82 613 2.25e-101 319
Msa0916310 AT3G29110.1 34.375 544 348 8 17 554 55 595 2.82e-101 318
Msa0916310 AT2G23230.1 33.636 550 345 10 16 555 55 594 4.77e-99 313
Msa0916310 AT1G66020.1 32.657 542 356 6 17 552 56 594 6.50e-98 310
Msa0916310 AT1G48800.1 32.418 546 353 9 17 552 63 602 5.31e-97 307
Msa0916310 AT4G13280.1 33.520 537 316 9 27 556 22 524 8.57e-95 299
Msa0916310 AT4G16730.1 33.012 518 325 9 52 554 27 537 9.29e-95 300
Msa0916310 AT4G16730.2 32.998 497 312 8 73 554 1 491 7.59e-92 290
Msa0916310 AT1G61680.1 32.866 499 323 4 54 546 77 569 1.18e-90 290
Msa0916310 AT4G16740.1 32.432 555 350 12 14 556 23 564 1.81e-89 286
Msa0916310 AT1G61680.2 32.465 499 318 5 54 546 77 562 3.03e-87 281
Msa0916310 AT2G24210.1 31.250 560 364 11 10 556 39 590 3.78e-87 281
Msa0916310 AT5G48110.1 38.192 343 207 5 215 556 1 339 4.42e-85 268
Msa0916310 AT1G48820.1 31.169 539 321 11 17 549 63 557 2.04e-83 271
Msa0916310 AT3G25820.1 29.856 556 370 12 15 556 45 594 7.04e-81 265
Msa0916310 AT3G25830.1 29.856 556 370 12 15 556 45 594 7.04e-81 265
Msa0916310 AT3G25810.1 29.696 559 370 9 15 556 45 597 1.49e-80 264
Msa0916310 AT4G16740.2 34.921 378 227 7 14 381 23 391 6.89e-69 228
Msa0916310 AT1G66020.2 34.417 369 233 6 17 379 56 421 3.11e-67 224
Msa0916310 AT3G25820.2 33.143 350 220 7 15 357 45 387 1.57e-61 209
Msa0916310 AT4G16740.4 34.862 327 195 6 14 330 23 341 1.70e-57 197
Msa0916310 AT4G16740.3 34.862 327 195 6 14 330 23 341 1.70e-57 197
Msa0916310 AT3G25820.4 31.889 323 209 6 15 330 45 363 1.56e-53 187
Msa0916310 AT3G25820.3 31.889 323 209 6 15 330 45 363 1.56e-53 187
Msa0916310 AT1G79460.1 25.437 515 331 19 70 546 274 773 4.88e-31 129
Msa0916310 AT1G61120.1 23.576 509 353 10 71 556 289 784 1.95e-26 114
Msa0916310 AT4G02780.1 29.231 260 156 5 68 300 329 587 1.26e-23 105

Find 94 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTGCTGTGCTATTT+AGG 0.103456 6_2:+35812105 Msa0916310:CDS
TCTACTTGCATTGGCAAAAT+TGG 0.119753 6_2:+35813057 Msa0916310:CDS
TTCTCTTGCTGTGCTATTTA+GGG 0.189824 6_2:+35812106 Msa0916310:CDS
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_2:-35813329 None:intergenic
ATGCAAGTAGAATTTCATTA+TGG 0.248221 6_2:-35813045 None:intergenic
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_2:+35812056 Msa0916310:CDS
TCCTTATGCTTCAGAATCTA+TGG 0.272455 6_2:+35811647 Msa0916310:CDS
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_2:+35814799 Msa0916310:CDS
ACAAATTGATAAACTTAAAA+AGG 0.282879 6_2:+35811905 Msa0916310:CDS
AGCCTGCATCAAAAGGAATT+TGG 0.290423 6_2:+35813097 Msa0916310:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_2:+35812025 Msa0916310:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_2:-35813371 None:intergenic
CAGATTTCCACCCTAGCGTT+TGG 0.311610 6_2:+35811610 Msa0916310:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.325288 6_2:+35811611 Msa0916310:CDS
TGCAAAACCGATTTCTCATT+AGG 0.335406 6_2:-35811576 None:intergenic
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6_2:+35813721 Msa0916310:CDS
TGAGGGAATATGATATGAAT+AGG 0.340079 6_2:+35815001 Msa0916310:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_2:-35812769 None:intergenic
TGTGCCGCAATATTCATATC+AGG 0.348479 6_2:-35811885 None:intergenic
GAGTAGTTGAATGTTGCTTT+TGG 0.353926 6_2:+35813284 Msa0916310:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_2:+35814793 Msa0916310:CDS
AGGACATGTTTCTTCGTACT+TGG 0.361077 6_2:+35814969 Msa0916310:CDS
GACATATATTAATGATTTGC+TGG 0.369605 6_2:+35815206 Msa0916310:CDS
TGCAAGAGAGGGACTCAATC+GGG 0.370027 6_2:-35812927 None:intergenic
CATCAATCCTAATGAGAAAT+CGG 0.381109 6_2:+35811569 Msa0916310:CDS
GATTGATTCAATATGTCGTT+TGG 0.383797 6_2:+35811983 Msa0916310:CDS
TGCAAGTAGAATTTCATTAT+GGG 0.387262 6_2:-35813044 None:intergenic
CGTACTTGGAATGTTATATG+AGG 0.388936 6_2:+35814983 Msa0916310:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6_2:-35813023 None:intergenic
CGACAAAAGACATCTTTGAT+TGG 0.390521 6_2:+35814745 Msa0916310:CDS
ATAGTTAGCATTCAGCCATT+TGG 0.402662 6_2:-35814628 None:intergenic
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_2:+35813754 Msa0916310:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_2:-35814654 None:intergenic
TAAAGCAACTTCATGTAATC+CGG 0.421098 6_2:-35813740 None:intergenic
ATAAATACTCAAATTTCTAA+AGG 0.433133 6_2:-35815234 None:intergenic
GACAAAAGACATCTTTGATT+GGG 0.442878 6_2:+35814746 Msa0916310:CDS
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_2:+35815046 Msa0916310:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_2:+35814800 Msa0916310:CDS
ATTGATTCAATATGTCGTTT+GGG 0.450241 6_2:+35811984 Msa0916310:CDS
TAGGTGGGATATTAATTGCT+TGG 0.452782 6_2:+35813709 Msa0916310:intron
TACGACTTCTTACATTGGAA+TGG 0.454510 6_2:+35814713 Msa0916310:CDS
TAATGAAATTCTACTTGCAT+TGG 0.460272 6_2:+35813048 Msa0916310:CDS
GATGACACATACGATGCATA+TGG 0.460937 6_2:+35813388 Msa0916310:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_2:+35814714 Msa0916310:CDS
GCTCCAAAGCCTGCATCAAA+AGG 0.461740 6_2:+35813090 Msa0916310:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_2:+35813794 Msa0916310:CDS
CTTATATGAGTGAGGCCAAA+TGG 0.471857 6_2:+35814613 Msa0916310:CDS
GAGGGAATATGATATGAATA+GGG 0.475500 6_2:+35815002 Msa0916310:CDS
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_2:+35815062 Msa0916310:CDS
TTGCAAGAGAGGGACTCAAT+CGG 0.492660 6_2:-35812928 None:intergenic
TGGCCTCACTCATATAAGCT+TGG 0.493836 6_2:-35814608 None:intergenic
ATATTGGGGCTCAAAATATA+CGG 0.495144 6_2:-35813314 None:intergenic
CATGGACTTTATGTTTCACC+TGG 0.496318 6_2:+35812140 Msa0916310:CDS
CTGTGCTATTTAGGGTGTTG+AGG 0.502767 6_2:+35812114 Msa0916310:CDS
TTGAGAACACACGTCAGAAT+AGG 0.502783 6_2:-35815114 None:intergenic
ATACAGGTGGTGGAAGGAGT+TGG 0.512387 6_2:+35813228 Msa0916310:intron
AGACGTGTTCAACCAATTCA+AGG 0.513816 6_2:+35812757 Msa0916310:intron
ACCATAGATTCTGAAGCATA+AGG 0.518574 6_2:-35811648 None:intergenic
TAACTTCTTGCCACTAGCCT+AGG 0.521919 6_2:-35812995 None:intergenic
GCCTCACATATGATGGTTCA+TGG 0.522278 6_2:+35812845 Msa0916310:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_2:-35814702 None:intergenic
GTGGGATATTAATTGCTTGG+AGG 0.529634 6_2:+35813712 Msa0916310:CDS
TTATGGTCACCTTGAGTCGA+TGG 0.531695 6_2:+35812901 Msa0916310:CDS
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_2:-35813328 None:intergenic
ATAGGTAACGGAACTTCAGT+TGG 0.538099 6_2:-35815096 None:intergenic
AAACAGTTTGAGCAGAAAAG+AGG 0.539017 6_2:+35814949 Msa0916310:intron
AACATTGGTCGTAGATGTTG+AGG 0.541350 6_2:+35812802 Msa0916310:CDS
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_2:+35813326 Msa0916310:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_2:+35812122 Msa0916310:CDS
GTACTTGGAATGTTATATGA+GGG 0.567173 6_2:+35814984 Msa0916310:CDS
GTATGAAGCCTCACATATGA+TGG 0.567934 6_2:+35812838 Msa0916310:CDS
TTTACTTGTGTTGCAAGAGA+GGG 0.569978 6_2:-35812938 None:intergenic
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_2:+35814689 Msa0916310:CDS
ATAGCACAGCAAGAGAATGA+AGG 0.572946 6_2:-35812100 None:intergenic
CTTTATATACAGGTGGTGGA+AGG 0.574461 6_2:+35813222 Msa0916310:intron
CAAGAGAGGGACTCAATCGG+GGG 0.579721 6_2:-35812925 None:intergenic
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_2:+35814708 Msa0916310:CDS
AGGAAACTTCAGTGAAACAT+TGG 0.587870 6_2:+35812787 Msa0916310:CDS
GCAAGAGAGGGACTCAATCG+GGG 0.588252 6_2:-35812926 None:intergenic
ACTACTCTATCTCGTGCATA+CGG 0.592321 6_2:-35813268 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_2:+35814675 Msa0916310:CDS
GATTTCCACCCTAGCGTTTG+GGG 0.596026 6_2:+35811612 Msa0916310:CDS
AATCTCCCCAAACGCTAGGG+TGG 0.601357 6_2:-35811617 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_2:+35815174 Msa0916310:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_2:-35814701 None:intergenic
GGATGAAATTGTGTCAAGTG+AGG 0.615560 6_2:+35814821 Msa0916310:CDS
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_2:+35812767 Msa0916310:CDS
GGAACCTGATATGAATATTG+CGG 0.628405 6_2:+35811881 Msa0916310:intron
ACATTGGTCGTAGATGTTGA+GGG 0.633793 6_2:+35812803 Msa0916310:CDS
ACCATGAACCATCATATGTG+AGG 0.634158 6_2:-35812846 None:intergenic
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_2:+35814605 Msa0916310:CDS
ACACACGTCAGAATAGGTAA+CGG 0.688917 6_2:-35815108 None:intergenic
AAGAGAGGGACTCAATCGGG+GGG 0.694864 6_2:-35812924 None:intergenic
TAACTATATACCAACAACAG+AGG 0.703519 6_2:+35814644 Msa0916310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTTATGTTTTTAATT+TGG + chr6_2:35812196-35812215 Msa0916310:intron 10.0%
!! TGATTATAAAGTAATATTAA+TGG + chr6_2:35812504-35812523 Msa0916310:intron 10.0%
!! ATTATTGTTTAATATTATTG+TGG + chr6_2:35812716-35812735 Msa0916310:intron 10.0%
!!! AATTTCATTTAAATTTTTTG+TGG + chr6_2:35813952-35813971 Msa0916310:intron 10.0%
!!! TTAATTACTTAGTTTTTTTT+TGG + chr6_2:35814526-35814545 Msa0916310:intron 10.0%
!! CATATAAAATAAATGTTAAT+AGG - chr6_2:35814559-35814578 None:intergenic 10.0%
!!! CTATTAACATTTATTTTATA+TGG + chr6_2:35814557-35814576 Msa0916310:intron 10.0%
!! ATGAGTAAATAAATAGTATA+AGG - chr6_2:35811743-35811762 None:intergenic 15.0%
!! ACAAATTGATAAACTTAAAA+AGG + chr6_2:35811905-35811924 Msa0916310:CDS 15.0%
!! TAATATGAATGTCTAAAAAA+TGG + chr6_2:35812321-35812340 Msa0916310:intron 15.0%
!! GGAAAAAAATTACATAAAAT+AGG + chr6_2:35812389-35812408 Msa0916310:intron 15.0%
!! TATAAAGACAAAAATAGTAT+AGG - chr6_2:35813209-35813228 None:intergenic 15.0%
!!! TATTGTTTATCTTTAAAGTT+TGG - chr6_2:35813503-35813522 None:intergenic 15.0%
!!! AAACATTTTTACATCATTTT+AGG + chr6_2:35814053-35814072 Msa0916310:intron 15.0%
!!! TATCTTGAAATTTTAATTAC+TGG + chr6_2:35814459-35814478 Msa0916310:intron 15.0%
!! AATTGATAAACTTAAAAAGG+AGG + chr6_2:35811908-35811927 Msa0916310:CDS 20.0%
!!! AATTCTCTTTTTACTAAAAG+TGG - chr6_2:35812351-35812370 None:intergenic 20.0%
!! AAAAAAGGTTCTTACTTAAT+AGG - chr6_2:35812544-35812563 None:intergenic 20.0%
!!! CTATTTTTGTCTTTATATAC+AGG + chr6_2:35813212-35813231 Msa0916310:intron 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + chr6_2:35813420-35813439 Msa0916310:CDS 20.0%
!!! TGATTCTTTTAATAGAGTAA+TGG + chr6_2:35813661-35813680 Msa0916310:intron 20.0%
!!! TTGCAATCAAAATGATTTTT+AGG + chr6_2:35813690-35813709 Msa0916310:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + chr6_2:35813694-35813713 Msa0916310:intron 20.0%
!!! AATTTTTTGTGGTTATCAAA+TGG + chr6_2:35813963-35813982 Msa0916310:intron 20.0%
!! TGTAAAAAACTTATTATCCA+TGG + chr6_2:35814191-35814210 Msa0916310:intron 20.0%
!! TCGTAGAATTAATATTACAA+AGG - chr6_2:35814433-35814452 None:intergenic 20.0%
!! ATGACACTTAATTGTTGTTA+TGG - chr6_2:35811816-35811835 None:intergenic 25.0%
!!! TGTATGTTTTGAATACATAC+AGG + chr6_2:35811860-35811879 Msa0916310:intron 25.0%
!! ATTGATTCAATATGTCGTTT+GGG + chr6_2:35811984-35812003 Msa0916310:CDS 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + chr6_2:35812025-35812044 Msa0916310:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG + chr6_2:35812056-35812075 Msa0916310:CDS 25.0%
!! TAAGTTGAGATATATATACC+AGG - chr6_2:35812161-35812180 None:intergenic 25.0%
! TTGAGTAAAACAAATTAGAC+AGG + chr6_2:35812227-35812246 Msa0916310:intron 25.0%
!! GTAATATTTGACTTTGTCAT+GGG + chr6_2:35812292-35812311 Msa0916310:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - chr6_2:35812442-35812461 None:intergenic 25.0%
! AATATTAATGGCATACATGT+AGG + chr6_2:35812516-35812535 Msa0916310:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG - chr6_2:35813047-35813066 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG - chr6_2:35813048-35813067 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG + chr6_2:35813048-35813067 Msa0916310:CDS 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + chr6_2:35813215-35813234 Msa0916310:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG - chr6_2:35813374-35813393 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr6_2:35813431-35813450 Msa0916310:CDS 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + chr6_2:35813532-35813551 Msa0916310:intron 25.0%
! AATATATCCATCTTCAATCT+TGG + chr6_2:35813576-35813595 Msa0916310:intron 25.0%
!!! CAATCAAAATGATTTTTAGG+TGG + chr6_2:35813693-35813712 Msa0916310:intron 25.0%
!!! TCTCTTACTTCTTTTAAGAA+GGG - chr6_2:35813839-35813858 None:intergenic 25.0%
!!! ATCTCTTACTTCTTTTAAGA+AGG - chr6_2:35813840-35813859 None:intergenic 25.0%
! TTCAATCAAATAACTTCATG+AGG - chr6_2:35814129-35814148 None:intergenic 25.0%
! AACTCAGTTAATAAAATCCA+TGG - chr6_2:35814211-35814230 None:intergenic 25.0%
!! GACATATATTAATGATTTGC+TGG + chr6_2:35815206-35815225 Msa0916310:CDS 25.0%
CATCAATCCTAATGAGAAAT+CGG + chr6_2:35811569-35811588 Msa0916310:CDS 30.0%
! TTTTGCTAAATGCAGTTCAT+AGG + chr6_2:35811785-35811804 Msa0916310:intron 30.0%
!!! ATCAAGTTGACTTTTTCCAT+GGG - chr6_2:35811966-35811985 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+TGG - chr6_2:35811967-35811986 None:intergenic 30.0%
! GATTGATTCAATATGTCGTT+TGG + chr6_2:35811983-35812002 Msa0916310:CDS 30.0%
! CGTAATATTTGACTTTGTCA+TGG + chr6_2:35812291-35812310 Msa0916310:intron 30.0%
!! GTGTTTCTGAAGTACAAAAA+AGG - chr6_2:35812559-35812578 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG + chr6_2:35812859-35812878 Msa0916310:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG + chr6_2:35812865-35812884 Msa0916310:CDS 30.0%
AAAAATATTGGAAGAGGCTT+TGG + chr6_2:35812871-35812890 Msa0916310:CDS 30.0%
!!! AGTAGTTGAATGTTGCTTTT+GGG + chr6_2:35813285-35813304 Msa0916310:CDS 30.0%
ATATTGGGGCTCAAAATATA+CGG - chr6_2:35813317-35813336 None:intergenic 30.0%
TTTCCTTGCTTGAGAATATT+GGG - chr6_2:35813332-35813351 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - chr6_2:35813333-35813352 None:intergenic 30.0%
TAAAGCAACTTCATGTAATC+CGG - chr6_2:35813743-35813762 None:intergenic 30.0%
! GTTGCTTTATAAATCACTCT+TGG + chr6_2:35813754-35813773 Msa0916310:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - chr6_2:35813838-35813857 None:intergenic 30.0%
TGGTTATCAAATGGAAGTTT+AGG + chr6_2:35813972-35813991 Msa0916310:intron 30.0%
! AAAGTATCACCATAATCACT+AGG + chr6_2:35814088-35814107 Msa0916310:intron 30.0%
! TCATGAGGATACATTTTTCT+TGG - chr6_2:35814114-35814133 None:intergenic 30.0%
AAGAAAAATGTATCATCGTG+AGG + chr6_2:35814268-35814287 Msa0916310:intron 30.0%
TGCAAAAAACTTATTGTCCA+TGG + chr6_2:35814347-35814366 Msa0916310:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - chr6_2:35814367-35814386 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + chr6_2:35814644-35814663 Msa0916310:CDS 30.0%
CACATATCAACAATATCAAG+TGG + chr6_2:35814675-35814694 Msa0916310:CDS 30.0%
GACAAAAGACATCTTTGATT+GGG + chr6_2:35814746-35814765 Msa0916310:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + chr6_2:35814984-35815003 Msa0916310:CDS 30.0%
TGAGGGAATATGATATGAAT+AGG + chr6_2:35815001-35815020 Msa0916310:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + chr6_2:35815002-35815021 Msa0916310:CDS 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - chr6_2:35815034-35815053 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - chr6_2:35815047-35815066 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG + chr6_2:35815046-35815065 Msa0916310:CDS 30.0%
! TGCAAAACCGATTTCTCATT+AGG - chr6_2:35811579-35811598 None:intergenic 35.0%
TCCTTATGCTTCAGAATCTA+TGG + chr6_2:35811647-35811666 Msa0916310:CDS 35.0%
!! ACCATAGATTCTGAAGCATA+AGG - chr6_2:35811651-35811670 None:intergenic 35.0%
GGAACCTGATATGAATATTG+CGG + chr6_2:35811881-35811900 Msa0916310:intron 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG + chr6_2:35812105-35812124 Msa0916310:CDS 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG + chr6_2:35812106-35812125 Msa0916310:CDS 35.0%
AGGAAACTTCAGTGAAACAT+TGG + chr6_2:35812787-35812806 Msa0916310:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+GGG - chr6_2:35812941-35812960 None:intergenic 35.0%
! TTTTACTTGTGTTGCAAGAG+AGG - chr6_2:35812942-35812961 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG + chr6_2:35813057-35813076 Msa0916310:CDS 35.0%
TTGTCTTTATATACAGGTGG+TGG + chr6_2:35813218-35813237 Msa0916310:intron 35.0%
!!! GAGTAGTTGAATGTTGCTTT+TGG + chr6_2:35813284-35813303 Msa0916310:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG - chr6_2:35813331-35813350 None:intergenic 35.0%
TAGGTGGGATATTAATTGCT+TGG + chr6_2:35813709-35813728 Msa0916310:intron 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + chr6_2:35813794-35813813 Msa0916310:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - chr6_2:35813831-35813850 None:intergenic 35.0%
! TTTTCTTGGCCTAGTGATTA+TGG - chr6_2:35814100-35814119 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG + chr6_2:35814605-35814624 Msa0916310:CDS 35.0%
ATAGTTAGCATTCAGCCATT+TGG - chr6_2:35814631-35814650 None:intergenic 35.0%
TACGACTTCTTACATTGGAA+TGG + chr6_2:35814713-35814732 Msa0916310:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + chr6_2:35814714-35814733 Msa0916310:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + chr6_2:35814745-35814764 Msa0916310:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG - chr6_2:35814783-35814802 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG + chr6_2:35814949-35814968 Msa0916310:intron 35.0%
CGTACTTGGAATGTTATATG+AGG + chr6_2:35814983-35815002 Msa0916310:CDS 35.0%
CGCTTGGAAAGATATAAATC+AGG + chr6_2:35815062-35815081 Msa0916310:CDS 35.0%
AAAAATCTCCCCAAACGCTA+GGG - chr6_2:35811623-35811642 None:intergenic 40.0%
AAAAAATCTCCCCAAACGCT+AGG - chr6_2:35811624-35811643 None:intergenic 40.0%
TGTGCCGCAATATTCATATC+AGG - chr6_2:35811888-35811907 None:intergenic 40.0%
CTCAAAAACAGAGAAACCCA+TGG + chr6_2:35811947-35811966 Msa0916310:CDS 40.0%
ATAGCACAGCAAGAGAATGA+AGG - chr6_2:35812103-35812122 None:intergenic 40.0%
CATGGACTTTATGTTTCACC+TGG + chr6_2:35812140-35812159 Msa0916310:CDS 40.0%
AGACGTGTTCAACCAATTCA+AGG + chr6_2:35812757-35812776 Msa0916310:intron 40.0%
AACATTGGTCGTAGATGTTG+AGG + chr6_2:35812802-35812821 Msa0916310:CDS 40.0%
ACATTGGTCGTAGATGTTGA+GGG + chr6_2:35812803-35812822 Msa0916310:CDS 40.0%
GTATGAAGCCTCACATATGA+TGG + chr6_2:35812838-35812857 Msa0916310:CDS 40.0%
ACCATGAACCATCATATGTG+AGG - chr6_2:35812849-35812868 None:intergenic 40.0%
!!! GAGGCTTTGGCTTTTACTTA+TGG + chr6_2:35812884-35812903 Msa0916310:CDS 40.0%
GGATGAATCTTGCTCATAGA+TGG - chr6_2:35813026-35813045 None:intergenic 40.0%
! ATTCCTTTTGATGCAGGCTT+TGG - chr6_2:35813096-35813115 None:intergenic 40.0%
AGCCTGCATCAAAAGGAATT+TGG + chr6_2:35813097-35813116 Msa0916310:CDS 40.0%
! GTCCAAATTCCTTTTGATGC+AGG - chr6_2:35813102-35813121 None:intergenic 40.0%
!! CTTTATATACAGGTGGTGGA+AGG + chr6_2:35813222-35813241 Msa0916310:intron 40.0%
ACTACTCTATCTCGTGCATA+CGG - chr6_2:35813271-35813290 None:intergenic 40.0%
GATGACACATACGATGCATA+TGG + chr6_2:35813388-35813407 Msa0916310:CDS 40.0%
TTAGCGACCAAGATTGAAGA+TGG - chr6_2:35813586-35813605 None:intergenic 40.0%
GTGGGATATTAATTGCTTGG+AGG + chr6_2:35813712-35813731 Msa0916310:CDS 40.0%
TAATTGCTTGGAGGATCTTC+CGG + chr6_2:35813721-35813740 Msa0916310:CDS 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - chr6_2:35813832-35813851 None:intergenic 40.0%
CTTATATGAGTGAGGCCAAA+TGG + chr6_2:35814613-35814632 Msa0916310:CDS 40.0%
TTGGCTACGACTTCTTACAT+TGG + chr6_2:35814708-35814727 Msa0916310:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG + chr6_2:35814800-35814819 Msa0916310:CDS 40.0%
GGATGAAATTGTGTCAAGTG+AGG + chr6_2:35814821-35814840 Msa0916310:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + chr6_2:35814969-35814988 Msa0916310:CDS 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - chr6_2:35815099-35815118 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - chr6_2:35815111-35815130 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - chr6_2:35815117-35815136 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG + chr6_2:35815134-35815153 Msa0916310:CDS 40.0%
GATAACTACACACACTCTGA+CGG + chr6_2:35815174-35815193 Msa0916310:CDS 40.0%
AGATTTCCACCCTAGCGTTT+GGG + chr6_2:35811611-35811630 Msa0916310:CDS 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + chr6_2:35812114-35812133 Msa0916310:CDS 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + chr6_2:35812122-35812141 Msa0916310:CDS 45.0%
AACCAATTCAAGGACGAGCA+AGG + chr6_2:35812767-35812786 Msa0916310:CDS 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - chr6_2:35812772-35812791 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG + chr6_2:35812845-35812864 Msa0916310:CDS 45.0%
TTATGGTCACCTTGAGTCGA+TGG + chr6_2:35812901-35812920 Msa0916310:CDS 45.0%
TTGCAAGAGAGGGACTCAAT+CGG - chr6_2:35812931-35812950 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - chr6_2:35812985-35813004 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG + chr6_2:35812985-35813004 Msa0916310:CDS 45.0%
! TAACTTCTTGCCACTAGCCT+AGG - chr6_2:35812998-35813017 None:intergenic 45.0%
AGCCCCAATATTCTCAAGCA+AGG + chr6_2:35813326-35813345 Msa0916310:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG - chr6_2:35814611-35814630 None:intergenic 45.0%
TGCATGTACTCCTCTGTTGT+TGG - chr6_2:35814657-35814676 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + chr6_2:35814689-35814708 Msa0916310:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - chr6_2:35814704-35814723 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - chr6_2:35814705-35814724 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG + chr6_2:35814793-35814812 Msa0916310:CDS 45.0%
CTGCTATACATTGCAGGCTT+AGG + chr6_2:35814799-35814818 Msa0916310:CDS 45.0%
!!! ATTTTATAATAATAAAAGAT+AGG + chr6_2:35812368-35812387 Msa0916310:intron 5.0%
CAGATTTCCACCCTAGCGTT+TGG + chr6_2:35811610-35811629 Msa0916310:CDS 50.0%
GATTTCCACCCTAGCGTTTG+GGG + chr6_2:35811612-35811631 Msa0916310:CDS 50.0%
TGCAAGAGAGGGACTCAATC+GGG - chr6_2:35812930-35812949 None:intergenic 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + chr6_2:35812978-35812997 Msa0916310:CDS 50.0%
GCTCCAAAGCCTGCATCAAA+AGG + chr6_2:35813090-35813109 Msa0916310:CDS 50.0%
!! ATACAGGTGGTGGAAGGAGT+TGG + chr6_2:35813228-35813247 Msa0916310:intron 50.0%
AATCTCCCCAAACGCTAGGG+TGG - chr6_2:35811620-35811639 None:intergenic 55.0%
AAGAGAGGGACTCAATCGGG+GGG - chr6_2:35812927-35812946 None:intergenic 55.0%
CAAGAGAGGGACTCAATCGG+GGG - chr6_2:35812928-35812947 None:intergenic 55.0%
GCAAGAGAGGGACTCAATCG+GGG - chr6_2:35812929-35812948 None:intergenic 55.0%
!! ATCGGGGGGCCATCGACTCA+AGG - chr6_2:35812913-35812932 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 35811552 35815248 35811552 ID=Msa0916310;Name=Msa0916310
chr6_2 mRNA 35811552 35815248 35811552 ID=Msa0916310-mRNA-1;Parent=Msa0916310;Name=Msa0916310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|7|0|556
chr6_2 exon 35811552 35811668 35811552 ID=Msa0916310-mRNA-1:exon:6262;Parent=Msa0916310-mRNA-1
chr6_2 exon 35811882 35812161 35811882 ID=Msa0916310-mRNA-1:exon:6263;Parent=Msa0916310-mRNA-1
chr6_2 exon 35812759 35813131 35812759 ID=Msa0916310-mRNA-1:exon:6264;Parent=Msa0916310-mRNA-1
chr6_2 exon 35813234 35813452 35813234 ID=Msa0916310-mRNA-1:exon:6265;Parent=Msa0916310-mRNA-1
chr6_2 exon 35813712 35813850 35813712 ID=Msa0916310-mRNA-1:exon:6266;Parent=Msa0916310-mRNA-1
chr6_2 exon 35814594 35814842 35814594 ID=Msa0916310-mRNA-1:exon:6267;Parent=Msa0916310-mRNA-1
chr6_2 exon 35814955 35815248 35814955 ID=Msa0916310-mRNA-1:exon:6268;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35811552 35811668 35811552 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35811882 35812161 35811882 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35812759 35813131 35812759 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35813234 35813452 35813234 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35813712 35813850 35813712 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35814594 35814842 35814594 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
chr6_2 CDS 35814955 35815248 35814955 ID=Msa0916310-mRNA-1:cds;Parent=Msa0916310-mRNA-1
Gene Sequence

>Msa0916310

ATGTCTTCAGTAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTTTGGGGAGATTTTTTCATTCCTTATGCTTCAGAATCTATGGAACCTGATATGAATATTGCGGCACAAATTGATAAACTTAAAAAGGAGGTTAGACAAATGCTTGTCTCAAAAACAGAGAAACCCATGGAAAAAGTCAACTTGATTGATTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCTCTTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTATGTTTCACCTGACGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACATTGGTCGTAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCTTTGGCTTTTACTTATGGTCACCTTGAGTCGATGGCCCCCCGATTGAGTCCCTCTCTTGCAACACAAGTAAAACAAAGCTTAAGACAATCTCTCCGCAAAAACTTGCCTAGGCTAGTGGCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTGCATTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTGCATCAAAAGGAATTTGGACACATTAGCAAGTGGTGGAAGGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTTGAATGTTGCTTTTGGGTTATGACCGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATACGATGCATATGGAACTATTGATGAATTAGAACTTTTTACTAAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAAATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGATTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGTGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTGGAATGTTATATGAGGGAATATGATATGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGAAGTTCCGTTACCTATTCTGACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGACTAATGAAGACATATATTAATGATTTGCTGGTCAATCCTTTAGAAATTTGA
Protein sequence

>Msa0916310

MSSVDYINPNEKSVLQRNVADFHPSVWGDFFIPYASESMEPDMNIAAQIDKLKKEVRQMLVSKTEKPMEKVNLIDSICRLGVSYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSLAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETLVVDVEGMLNLYEASHMMVHGEKILEEALAFTYGHLESMAPRLSPSLATQVKQSLRQSLRKNLPRLVARSYISIYEQDSSHNEILLALAKLDFNMLQSLHQKEFGHISKWWKELDIAQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTKAIERWDINCLEDLPDYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEAKWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDMNREAAIQECQKKIDNAWKDINQECLKPTEVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPLEI*