AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0894100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0894100 MtrunA17_Chr6g0466051 69.964 556 164 1 1 556 1 553 0.0 820
Msa0894100 MtrunA17_Chr7g0236991 69.604 556 166 1 1 556 1 553 0.0 820
Msa0894100 MtrunA17_Chr7g0237001 69.424 556 167 1 1 556 1 553 0.0 819
Msa0894100 MtrunA17_Chr7g0237041 69.424 556 167 1 1 556 1 553 0.0 819
Msa0894100 MtrunA17_Chr7g0237081 69.424 556 167 1 1 556 1 553 0.0 819
Msa0894100 MtrunA17_Chr7g0237051 69.424 556 167 1 1 556 1 553 0.0 819
Msa0894100 MtrunA17_Chr6g0465911 69.784 556 165 1 1 556 1 553 0.0 818
Msa0894100 MtrunA17_Chr5g0425371 68.705 556 171 1 1 556 1 553 0.0 803
Msa0894100 MtrunA17_Chr6g0465441 67.806 556 176 1 1 556 1 553 0.0 797
Msa0894100 MtrunA17_Chr6g0451711 66.248 557 187 1 1 556 1 557 0.0 786
Msa0894100 MtrunA17_Chr3g0105071 66.607 557 185 1 1 556 1 557 0.0 779
Msa0894100 MtrunA17_Chr6g0465851 70.849 518 151 0 39 556 1 518 0.0 775
Msa0894100 MtrunA17_Chr4g0024691 66.485 549 184 0 8 556 13 561 0.0 768
Msa0894100 MtrunA17_Chr3g0082691 66.300 546 183 1 12 556 8 553 0.0 764
Msa0894100 MtrunA17_Chr7g0236961 70.884 498 145 0 59 556 1 498 0.0 755
Msa0894100 MtrunA17_Chr7g0237011 70.884 498 145 0 59 556 1 498 0.0 754
Msa0894100 MtrunA17_Chr5g0431571 66.912 544 179 1 12 554 4 547 0.0 753
Msa0894100 MtrunA17_Chr5g0431651 65.625 544 185 2 13 554 7 550 0.0 742
Msa0894100 MtrunA17_Chr4g0042111 58.364 550 226 2 9 556 14 562 0.0 675
Msa0894100 MtrunA17_Chr7g0236971 69.825 401 121 0 156 556 1 401 0.0 604
Msa0894100 MtrunA17_Chr6g0465981 72.074 376 102 1 1 376 1 373 0.0 565
Msa0894100 MtrunA17_Chr6g0465871 72.074 376 102 1 1 376 1 373 0.0 565
Msa0894100 MtrunA17_Chr6g0466081 72.074 376 102 1 1 376 1 373 0.0 565
Msa0894100 MtrunA17_Chr6g0466111 73.964 338 88 0 39 376 1 338 0.0 522
Msa0894100 MtrunA17_Chr6g0465931 73.669 338 89 0 39 376 1 338 0.0 519
Msa0894100 MtrunA17_Chr2g0319041 44.891 548 294 8 15 556 12 557 2.93e-171 496
Msa0894100 MtrunA17_Chr7g0236951 73.163 313 84 0 59 371 1 313 5.28e-171 486
Msa0894100 MtrunA17_Chr7g0237031 73.163 313 84 0 59 371 1 313 1.61e-170 485
Msa0894100 MtrunA17_Chr8g0336181 44.545 550 297 6 13 556 9 556 3.13e-168 489
Msa0894100 MtrunA17_Chr2g0319051 43.470 513 284 6 48 556 4 514 3.29e-158 461
Msa0894100 MtrunA17_Chr6g0466031 65.769 260 89 0 297 556 1 260 1.17e-122 361
Msa0894100 MtrunA17_Chr4g0008621 44.750 400 217 4 15 410 19 418 7.63e-120 360
Msa0894100 MtrunA17_Chr5g0445511 66.946 239 79 0 151 389 1 239 2.20e-115 342
Msa0894100 MtrunA17_Chr4g0023911 34.615 546 346 4 13 554 41 579 1.50e-114 352
Msa0894100 MtrunA17_Chr2g0319071 36.240 516 277 11 43 554 20 487 2.15e-111 340
Msa0894100 MtrunA17_Chr7g0237061 61.923 260 76 2 297 556 1 237 9.62e-109 325
Msa0894100 MtrunA17_Chr2g0310331 36.900 542 328 9 17 554 53 584 1.13e-105 329
Msa0894100 MtrunA17_Chr2g0323151 36.111 468 284 4 71 534 4 460 1.57e-101 315
Msa0894100 MtrunA17_Chr2g0323131 34.442 511 316 7 49 554 67 563 2.53e-101 317
Msa0894100 MtrunA17_Chr6g0466021 70.588 204 57 1 1 204 1 201 2.06e-99 299
Msa0894100 MtrunA17_Chr7g0237071 70.792 202 59 0 59 260 1 202 8.08e-97 293
Msa0894100 MtrunA17_Chr8g0357411 32.909 550 360 6 7 554 45 587 1.84e-95 302
Msa0894100 MtrunA17_Chr4g0048921 33.268 511 328 6 44 550 64 565 1.34e-88 284
Msa0894100 MtrunA17_Chr7g0237021 69.186 172 53 0 385 556 1 172 1.50e-85 263
Msa0894100 MtrunA17_Chr7g0236941 69.186 172 53 0 385 556 1 172 1.50e-85 263
Msa0894100 MtrunA17_Chr4g0048911 30.876 502 333 7 55 548 61 556 1.82e-81 265
Msa0894100 MtrunA17_Chr6g0465941 65.116 172 60 0 385 556 1 172 8.03e-79 245
Msa0894100 MtrunA17_Chr6g0466121 65.116 172 60 0 385 556 1 172 8.03e-79 245
Msa0894100 MtrunA17_Chr6g0465991 65.116 172 60 0 385 556 1 172 8.03e-79 245
Msa0894100 MtrunA17_Chr6g0466091 65.116 172 60 0 385 556 1 172 8.03e-79 245
Msa0894100 MtrunA17_Chr6g0465881 64.535 172 61 0 385 556 1 172 3.76e-78 243
Msa0894100 MtrunA17_Chr2g0319081 39.450 327 176 8 233 556 120 427 2.99e-75 245
Msa0894100 MtrunA17_Chr2g0319081 36.232 138 85 2 1 135 3 140 1.89e-22 100
Msa0894100 MtrunA17_Chr5g0445501 62.209 172 65 0 385 556 1 172 1.30e-74 234
Msa0894100 MtrunA17_Chr2g0310401 32.944 428 282 4 130 554 5 430 2.00e-72 238
Msa0894100 MtrunA17_Chr2g0280581 28.764 518 344 8 47 547 9 518 6.40e-71 236
Msa0894100 MtrunA17_Chr7g0236921 63.924 158 53 1 403 556 1 158 7.22e-70 221
Msa0894100 MtrunA17_Chr3g0108941 28.916 498 343 8 61 550 19 513 4.44e-69 231
Msa0894100 MtrunA17_Chr3g0105691 29.495 495 335 6 54 534 37 531 2.51e-68 230
Msa0894100 MtrunA17_Chr3g0109031 29.209 493 329 8 54 529 4 493 5.68e-68 228
Msa0894100 MtrunA17_Chr3g0109001 29.897 485 326 8 55 529 14 494 8.73e-68 228
Msa0894100 MtrunA17_Chr3g0109021 29.412 493 328 8 54 529 4 493 2.32e-67 227
Msa0894100 MtrunA17_Chr6g0477111 29.314 481 328 7 68 539 1 478 3.86e-66 223
Msa0894100 MtrunA17_Chr3g0108981 29.299 471 322 5 68 529 1 469 8.65e-66 222
Msa0894100 MtrunA17_Chr3g0108961 29.299 471 322 5 68 529 1 469 8.65e-66 222
Msa0894100 MtrunA17_Chr3g0108991 28.629 496 338 8 54 534 4 498 5.14e-65 220
Msa0894100 MtrunA17_Chr3g0108951 28.629 496 338 8 54 534 4 498 5.14e-65 220
Msa0894100 MtrunA17_Chr3g0099031 29.175 497 342 8 61 550 19 512 8.68e-65 220
Msa0894100 MtrunA17_Chr7g0236931 61.039 154 57 1 403 556 1 151 2.79e-64 206
Msa0894100 MtrunA17_Chr3g0108971 28.692 474 330 7 68 534 1 473 1.10e-63 216
Msa0894100 MtrunA17_Chr3g0109011 28.571 476 328 7 68 534 1 473 2.19e-63 215
Msa0894100 MtrunA17_Chr6g0477121 29.136 405 276 6 133 529 10 411 1.43e-56 195
Msa0894100 MtrunA17_Chr7g0236981 65.185 135 44 1 1 135 1 132 6.86e-56 184
Msa0894100 MtrunA17_Chr7g0233861 64.444 135 39 1 196 330 33 158 9.15e-53 177
Msa0894100 MtrunA17_Chr7g0217361 32.890 301 201 1 255 554 8 308 3.71e-49 172
Msa0894100 MtrunA17_Chr8g0357221 35.743 249 153 4 10 257 48 290 1.99e-40 148
Msa0894100 MtrunA17_Chr5g0445521 65.306 98 34 0 1 98 1 98 1.04e-38 137
Msa0894100 MtrunA17_Chr3g0101681 25.241 519 340 15 70 554 276 780 8.79e-36 142
Msa0894100 MtrunA17_Chr8g0357231 29.457 258 180 2 298 554 1 257 2.99e-34 130
Msa0894100 MtrunA17_Chr2g0310121 24.138 522 342 16 70 554 275 779 3.35e-34 138
Msa0894100 MtrunA17_Chr5g0445401 70.213 94 24 2 167 257 2 94 1.28e-33 123
Msa0894100 MtrunA17_Chr3g0082711 49.138 116 42 1 441 556 1 99 3.71e-32 119
Msa0894100 MtrunA17_Chr7g0259881 27.273 275 168 6 68 313 227 498 1.42e-23 105
Msa0894100 MtrunA17_Chr7g0218001 29.562 274 161 6 68 310 344 616 4.77e-23 103
Msa0894100 MtrunA17_Chr7g0217351 29.493 217 144 5 46 258 62 273 1.20e-20 92.8
Msa0894100 MtrunA17_Chr2g0281651 24.390 328 234 9 233 554 43 362 4.35e-19 89.7
Msa0894100 MtrunA17_Chr7g0218041 30.380 237 140 6 120 332 3 238 9.51e-14 73.6
Msa0894100 MtrunA17_Chr2g0310411 32.787 122 74 3 10 131 51 164 6.28e-13 67.0
Msa0894100 MtrunA17_Chr4g0008631 36.145 83 51 2 475 556 1 82 9.91e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0894100 AT5G23960.2 39.383 551 319 7 13 556 3 545 4.36e-144 427
Msa0894100 AT5G23960.1 39.350 554 317 9 13 556 3 547 1.44e-142 423
Msa0894100 AT1G70080.1 37.071 553 338 7 8 552 57 607 1.13e-129 392
Msa0894100 AT3G14490.1 37.729 546 330 5 17 556 60 601 5.76e-126 382
Msa0894100 AT3G14520.1 35.860 541 337 5 22 556 68 604 3.54e-123 375
Msa0894100 AT1G31950.1 35.860 541 337 5 22 556 70 606 3.50e-121 370
Msa0894100 AT1G31950.3 35.401 548 331 6 22 556 70 607 3.61e-121 370
Msa0894100 AT3G14540.1 36.111 540 337 4 22 556 65 601 1.32e-120 369
Msa0894100 AT3G29410.1 35.649 547 338 5 17 556 64 603 2.72e-118 362
Msa0894100 AT5G44630.1 35.219 548 338 7 18 554 14 555 4.67e-116 355
Msa0894100 AT1G33750.1 34.579 535 344 4 24 556 73 603 8.14e-115 353
Msa0894100 AT3G32030.1 33.571 560 358 7 2 556 54 604 1.70e-113 350
Msa0894100 AT4G20210.1 33.942 548 349 7 17 556 58 600 8.29e-113 348
Msa0894100 AT3G29410.2 36.327 490 308 3 69 556 11 498 2.00e-112 344
Msa0894100 AT4G20200.1 35.328 518 321 8 48 556 92 604 7.99e-111 343
Msa0894100 AT4G13300.1 34.694 539 341 7 25 556 20 554 3.79e-110 340
Msa0894100 AT4G15870.1 34.566 541 328 9 25 556 75 598 1.78e-107 334
Msa0894100 AT3G29190.1 33.333 519 330 7 48 556 89 601 4.06e-105 328
Msa0894100 AT4G13280.2 34.078 537 343 7 27 556 22 554 9.49e-105 326
Msa0894100 AT3G14540.2 37.444 446 272 3 22 463 65 507 2.78e-103 320
Msa0894100 AT1G31950.2 36.285 463 272 6 22 471 70 522 5.05e-103 320
Msa0894100 AT2G23230.2 34.182 550 347 9 16 555 55 599 1.80e-102 322
Msa0894100 AT4G20230.1 33.658 514 328 7 48 552 92 601 2.21e-101 319
Msa0894100 AT4G20230.2 33.658 514 328 7 48 552 104 613 2.81e-101 319
Msa0894100 AT3G29110.1 33.883 546 348 8 17 554 55 595 1.54e-100 316
Msa0894100 AT2G23230.1 34.000 550 343 10 16 555 55 594 7.64e-100 315
Msa0894100 AT1G66020.1 32.657 542 356 6 17 552 56 594 9.14e-98 309
Msa0894100 AT1G48800.1 32.117 548 352 10 17 552 63 602 2.39e-95 303
Msa0894100 AT4G16730.1 32.044 543 346 10 28 554 2 537 3.41e-94 298
Msa0894100 AT4G13280.1 33.147 537 318 9 27 556 22 524 5.09e-93 295
Msa0894100 AT4G16730.2 32.465 499 316 8 73 556 1 493 7.67e-92 290
Msa0894100 AT4G16740.1 31.900 558 353 13 12 556 21 564 1.45e-88 284
Msa0894100 AT1G61680.1 32.530 498 324 4 55 546 78 569 2.79e-88 283
Msa0894100 AT2G24210.1 31.429 560 363 11 10 556 39 590 7.57e-88 283
Msa0894100 AT5G48110.1 37.901 343 208 5 215 556 1 339 4.14e-85 268
Msa0894100 AT1G61680.2 32.129 498 319 5 55 546 78 562 7.08e-85 275
Msa0894100 AT1G48820.1 30.983 539 322 11 17 549 63 557 1.83e-82 268
Msa0894100 AT3G25810.1 30.357 560 365 11 15 556 45 597 1.48e-80 264
Msa0894100 AT3G25820.1 30.125 561 362 13 15 556 45 594 3.67e-80 263
Msa0894100 AT3G25830.1 30.125 561 362 13 15 556 45 594 3.67e-80 263
Msa0894100 AT4G16740.2 34.565 379 227 8 14 381 23 391 1.67e-68 226
Msa0894100 AT1G66020.2 34.688 369 232 6 17 379 56 421 2.95e-67 224
Msa0894100 AT3G25820.2 32.216 388 240 9 15 389 45 422 1.33e-61 210
Msa0894100 AT4G16740.4 34.451 328 195 7 14 330 23 341 5.14e-57 196
Msa0894100 AT4G16740.3 34.451 328 195 7 14 330 23 341 5.14e-57 196
Msa0894100 AT3G25820.4 32.622 328 200 7 15 330 45 363 4.58e-53 186
Msa0894100 AT3G25820.3 32.622 328 200 7 15 330 45 363 4.58e-53 186
Msa0894100 AT1G79460.1 25.243 515 332 19 70 546 274 773 6.58e-31 128
Msa0894100 AT1G61120.1 23.242 512 357 10 68 556 286 784 1.85e-25 111
Msa0894100 AT4G02780.1 28.462 260 158 5 68 300 329 587 1.95e-22 102

Find 92 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTGCTGTGCTATTT+AGG 0.103456 6_1:+79247349 Msa0894100:CDS
TCTACTTGCATTGGCAAAAT+TGG 0.119753 6_1:+79248318 Msa0894100:CDS
TTCTCTTGCTGTGCTATTTA+GGG 0.189824 6_1:+79247350 Msa0894100:CDS
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_1:-79248590 None:intergenic
ATGCAAGTAGAATTTCATTA+TGG 0.248221 6_1:-79248306 None:intergenic
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_1:+79247300 Msa0894100:CDS
TCCTTATGCTTCAGAATCTA+TGG 0.272455 6_1:+79246492 Msa0894100:CDS
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_1:+79250061 Msa0894100:CDS
TGCAAAATCGATTTCTCATT+AGG 0.288919 6_1:-79246421 None:intergenic
AGCCTGCATCAAAAGGAATT+TGG 0.290423 6_1:+79248358 Msa0894100:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_1:+79247269 Msa0894100:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_1:-79248632 None:intergenic
CAGATTTCCACCCTAGCGTT+TGG 0.311610 6_1:+79246455 Msa0894100:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.325288 6_1:+79246456 Msa0894100:CDS
TAATTGCCTGGAGGATCTTC+CGG 0.335446 6_1:+79248982 Msa0894100:CDS
TGAGGGAATATGATATGAAT+AGG 0.340079 6_1:+79250263 Msa0894100:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_1:-79248030 None:intergenic
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6_1:+79248545 Msa0894100:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_1:+79250055 Msa0894100:CDS
TGTGCCGCAGTATTCATATC+AGG 0.354426 6_1:-79247129 None:intergenic
AGGACATGTTTCTTCGTACT+TGG 0.361077 6_1:+79250231 Msa0894100:CDS
TGCAAGTAGAATTTCATTAT+GGG 0.387262 6_1:-79248305 None:intergenic
CGTACTTGGAATGTTATATG+AGG 0.388936 6_1:+79250245 Msa0894100:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6_1:-79248284 None:intergenic
GATTGACTCAATATGTCGTT+TGG 0.390339 6_1:+79247227 Msa0894100:CDS
CGACAAAAGACATCTTTGAT+TGG 0.390521 6_1:+79250007 Msa0894100:CDS
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_1:+79249015 Msa0894100:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_1:-79249916 None:intergenic
TAAAGCAACTTCATGTAATC+CGG 0.421098 6_1:-79249001 None:intergenic
ATAAATACTCAAATTTCTAA+AGG 0.433133 6_1:-79250496 None:intergenic
GCCTCACATATGACGGTTCA+TGG 0.441110 6_1:+79248106 Msa0894100:CDS
GACAAAAGACATCTTTGATT+GGG 0.442878 6_1:+79250008 Msa0894100:CDS
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_1:+79250308 Msa0894100:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_1:+79250062 Msa0894100:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6_1:+79249975 Msa0894100:CDS
AATTTCGTCTTCAAAATGAT+AGG 0.458833 6_1:-79247256 None:intergenic
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6_1:-79249890 None:intergenic
TAATGAAATTCTACTTGCAT+TGG 0.460272 6_1:+79248309 Msa0894100:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_1:+79249976 Msa0894100:CDS
GCTCCAAAGCCTGCATCAAA+AGG 0.461740 6_1:+79248351 Msa0894100:CDS
GATGACACATATGATGCATA+TGG 0.467097 6_1:+79248649 Msa0894100:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_1:+79249055 Msa0894100:CDS
TAGGTGGGATATTAATTGCC+TGG 0.473504 6_1:+79248970 Msa0894100:intron
ATTGACTCAATATGTCGTTT+GGG 0.473862 6_1:+79247228 Msa0894100:CDS
GAGGGAATATGATATGAATA+GGG 0.475500 6_1:+79250264 Msa0894100:CDS
TTGCAAGAGAAGGACTCAAT+CGG 0.484754 6_1:-79248189 None:intergenic
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_1:+79250324 Msa0894100:CDS
TTCTGGTCACCTTGAGTCGA+TGG 0.501829 6_1:+79248162 Msa0894100:CDS
CTGTGCTATTTAGGGTGTTG+AGG 0.502767 6_1:+79247358 Msa0894100:CDS
TTGAGAACACACGTCAGAAT+AGG 0.502783 6_1:-79250376 None:intergenic
CATGGACTTTACGTTTCACC+TGG 0.512238 6_1:+79247384 Msa0894100:CDS
ATACAGGTGGTGGAAGGAGT+TGG 0.512387 6_1:+79248489 Msa0894100:intron
TTAACATGCCCTCAACATCT+AGG 0.512692 6_1:-79248072 None:intergenic
AGATGTGTTCAACCAATTCA+AGG 0.513117 6_1:+79248018 Msa0894100:intron
ACCATAGATTCTGAAGCATA+AGG 0.518574 6_1:-79246493 None:intergenic
TAACTTCTTGCCACTAGCCT+AGG 0.521919 6_1:-79248256 None:intergenic
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_1:-79249964 None:intergenic
TGGCCTCACTCATATAAGCT+TGG 0.531321 6_1:-79249870 None:intergenic
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_1:-79248589 None:intergenic
AACATTGGTCCTAGATGTTG+AGG 0.536563 6_1:+79248063 Msa0894100:CDS
ATAGGTAACGGAACTTCAGT+TGG 0.538099 6_1:-79250358 None:intergenic
AAACAGTTTGAGCAGAAAAG+AGG 0.539017 6_1:+79250211 Msa0894100:intron
TGCAAGAGAAGGACTCAATC+GGG 0.546913 6_1:-79248188 None:intergenic
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_1:+79248587 Msa0894100:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6_1:+79249875 Msa0894100:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_1:+79247366 Msa0894100:CDS
TTTACTTGTGTTGCAAGAGA+AGG 0.558925 6_1:-79248199 None:intergenic
ATCGGGTGGCCATCGACTCA+AGG 0.563910 6_1:-79248171 None:intergenic
TGTAATCCGGAAGATCCTCC+AGG 0.566106 6_1:-79248988 None:intergenic
GTACTTGGAATGTTATATGA+GGG 0.567173 6_1:+79250246 Msa0894100:CDS
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_1:+79249951 Msa0894100:CDS
ATAGCACAGCAAGAGAATGA+AGG 0.572946 6_1:-79247344 None:intergenic
CTTTATATACAGGTGGTGGA+AGG 0.574461 6_1:+79248483 Msa0894100:intron
AGGAAACTTCAGTGAAACAT+TGG 0.576091 6_1:+79248048 Msa0894100:CDS
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_1:+79249970 Msa0894100:CDS
ACTACTCTATCTCGTGCATA+CGG 0.590301 6_1:-79248529 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_1:+79249937 Msa0894100:CDS
GATTTCCACCCTAGCGTTTG+GGG 0.596026 6_1:+79246457 Msa0894100:CDS
AATCTCCCCAAACGCTAGGG+TGG 0.601357 6_1:-79246462 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_1:+79250436 Msa0894100:CDS
ACCATGAACCGTCATATGTG+AGG 0.611383 6_1:-79248107 None:intergenic
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_1:-79249963 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_1:+79248028 Msa0894100:CDS
ACATTGGTCCTAGATGTTGA+GGG 0.639888 6_1:+79248064 Msa0894100:CDS
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_1:+79249867 Msa0894100:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.666273 6_1:+79250083 Msa0894100:CDS
GTATGAAGCCTCACATATGA+CGG 0.667235 6_1:+79248099 Msa0894100:CDS
ACACACGTCAGAATAGGTAA+CGG 0.688917 6_1:-79250370 None:intergenic
AAGAGAAGGACTCAATCGGG+TGG 0.695745 6_1:-79248185 None:intergenic
GGAACCTGATATGAATACTG+CGG 0.696636 6_1:+79247125 Msa0894100:intron
GTGGGATATTAATTGCCTGG+AGG 0.699903 6_1:+79248973 Msa0894100:CDS
TAACTATATACCAACAACAG+AGG 0.703519 6_1:+79249906 Msa0894100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGACTATTTA+AGG - chr6_1:79246848-79246867 None:intergenic 10.0%
!!! CATTTTTTATGTTTTTAATT+TGG + chr6_1:79247440-79247459 Msa0894100:intron 10.0%
!! GAAAAAAAATTACATAAAAT+AGG + chr6_1:79247635-79247654 Msa0894100:intron 10.0%
!! TGATTATAAAGTAATATTAA+TGG + chr6_1:79247751-79247770 Msa0894100:intron 10.0%
!!! AATTTCATTTAAATTTTTTG+TGG + chr6_1:79249213-79249232 Msa0894100:intron 10.0%
!!! TAATTACATAGTTTTTTTTT+TGG + chr6_1:79249788-79249807 Msa0894100:intron 10.0%
!! CATATAAAATAAATGTTAAT+AGG - chr6_1:79249821-79249840 None:intergenic 10.0%
!!! CTATTAACATTTATTTTATA+TGG + chr6_1:79249819-79249838 Msa0894100:intron 10.0%
!! AAAAAAAAAAAGACTATTTA+AGG - chr6_1:79246848-79246867 None:intergenic 10.0%
!!! CATTTTTTATGTTTTTAATT+TGG + chr6_1:79247440-79247459 Msa0894100:intron 10.0%
!! GAAAAAAAATTACATAAAAT+AGG + chr6_1:79247635-79247654 Msa0894100:intron 10.0%
!! TGATTATAAAGTAATATTAA+TGG + chr6_1:79247751-79247770 Msa0894100:intron 10.0%
!!! AATTTCATTTAAATTTTTTG+TGG + chr6_1:79249213-79249232 Msa0894100:intron 10.0%
!!! TAATTACATAGTTTTTTTTT+TGG + chr6_1:79249788-79249807 Msa0894100:intron 10.0%
!! CATATAAAATAAATGTTAAT+AGG - chr6_1:79249821-79249840 None:intergenic 10.0%
!!! CTATTAACATTTATTTTATA+TGG + chr6_1:79249819-79249838 Msa0894100:intron 10.0%
!! TATATATAACCTTTCAAATA+AGG - chr6_1:79246779-79246798 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG - chr6_1:79246987-79247006 None:intergenic 15.0%
!! TATTATGAATGTCTAAAAAA+TGG + chr6_1:79247566-79247585 Msa0894100:intron 15.0%
!!! ATTGTTGTTTAATATTATTG+TGG + chr6_1:79247977-79247996 Msa0894100:intron 15.0%
!! TATAAAGACAAAAATAGTAT+AGG - chr6_1:79248470-79248489 None:intergenic 15.0%
!!! AAACATTTTTACATCATTTT+AGG + chr6_1:79249314-79249333 Msa0894100:intron 15.0%
!! TCATAGAATTAATATTACAA+AGG - chr6_1:79249694-79249713 None:intergenic 15.0%
!! TATATATAACCTTTCAAATA+AGG - chr6_1:79246779-79246798 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG - chr6_1:79246987-79247006 None:intergenic 15.0%
!! TATTATGAATGTCTAAAAAA+TGG + chr6_1:79247566-79247585 Msa0894100:intron 15.0%
!!! ATTGTTGTTTAATATTATTG+TGG + chr6_1:79247977-79247996 Msa0894100:intron 15.0%
!! TATAAAGACAAAAATAGTAT+AGG - chr6_1:79248470-79248489 None:intergenic 15.0%
!!! AAACATTTTTACATCATTTT+AGG + chr6_1:79249314-79249333 Msa0894100:intron 15.0%
!! TCATAGAATTAATATTACAA+AGG - chr6_1:79249694-79249713 None:intergenic 15.0%
!!! TAAAATTAGCCTTATTTGAA+AGG + chr6_1:79246767-79246786 Msa0894100:intron 20.0%
!! ATATTATGAAAAGTGATTGA+AGG + chr6_1:79246796-79246815 Msa0894100:intron 20.0%
!! TATTATGAAAAGTGATTGAA+GGG + chr6_1:79246797-79246816 Msa0894100:intron 20.0%
!! AATTGATAAACTAAAAACGA+AGG + chr6_1:79247152-79247171 Msa0894100:CDS 20.0%
!! TTGAGTAAAACAAATTAGAT+TGG + chr6_1:79247471-79247490 Msa0894100:intron 20.0%
!!! AATTCTCTTTTTACTAAAAG+TGG - chr6_1:79247596-79247615 None:intergenic 20.0%
!! AAAAAAGGTTCTTACTTAAT+AGG - chr6_1:79247791-79247810 None:intergenic 20.0%
!!! CTATTTTTGTCTTTATATAC+AGG + chr6_1:79248473-79248492 Msa0894100:intron 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + chr6_1:79248681-79248700 Msa0894100:CDS 20.0%
!!! TATTGTTTATGTCTAAAGTT+TGG - chr6_1:79248764-79248783 None:intergenic 20.0%
!!! TGATTCTTTTAATAGAGTAA+TGG + chr6_1:79248922-79248941 Msa0894100:intron 20.0%
!!! TTGCAATCAAAATGATTTTT+AGG + chr6_1:79248951-79248970 Msa0894100:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + chr6_1:79248955-79248974 Msa0894100:intron 20.0%
!!! AATTTTTTGTGGTTATCAAA+TGG + chr6_1:79249224-79249243 Msa0894100:intron 20.0%
!! TGTAAAAAACTTATTATCCA+TGG + chr6_1:79249452-79249471 Msa0894100:intron 20.0%
!!! TATCTTGACATTTTAATTAC+TGG + chr6_1:79249720-79249739 Msa0894100:intron 20.0%
!!! TAAAATTAGCCTTATTTGAA+AGG + chr6_1:79246767-79246786 Msa0894100:intron 20.0%
!! ATATTATGAAAAGTGATTGA+AGG + chr6_1:79246796-79246815 Msa0894100:intron 20.0%
!! TATTATGAAAAGTGATTGAA+GGG + chr6_1:79246797-79246816 Msa0894100:intron 20.0%
!! AATTGATAAACTAAAAACGA+AGG + chr6_1:79247152-79247171 Msa0894100:CDS 20.0%
!! TTGAGTAAAACAAATTAGAT+TGG + chr6_1:79247471-79247490 Msa0894100:intron 20.0%
!!! AATTCTCTTTTTACTAAAAG+TGG - chr6_1:79247596-79247615 None:intergenic 20.0%
!! AAAAAAGGTTCTTACTTAAT+AGG - chr6_1:79247791-79247810 None:intergenic 20.0%
!!! CTATTTTTGTCTTTATATAC+AGG + chr6_1:79248473-79248492 Msa0894100:intron 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + chr6_1:79248681-79248700 Msa0894100:CDS 20.0%
!!! TATTGTTTATGTCTAAAGTT+TGG - chr6_1:79248764-79248783 None:intergenic 20.0%
!!! TGATTCTTTTAATAGAGTAA+TGG + chr6_1:79248922-79248941 Msa0894100:intron 20.0%
!!! TTGCAATCAAAATGATTTTT+AGG + chr6_1:79248951-79248970 Msa0894100:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + chr6_1:79248955-79248974 Msa0894100:intron 20.0%
!!! AATTTTTTGTGGTTATCAAA+TGG + chr6_1:79249224-79249243 Msa0894100:intron 20.0%
!! TGTAAAAAACTTATTATCCA+TGG + chr6_1:79249452-79249471 Msa0894100:intron 20.0%
!!! TATCTTGACATTTTAATTAC+TGG + chr6_1:79249720-79249739 Msa0894100:intron 20.0%
! AATTCTTTAAATCAACAGCA+AGG + chr6_1:79246520-79246539 Msa0894100:intron 25.0%
!! AGACTGTAAATATTGTTGTT+TGG - chr6_1:79246635-79246654 None:intergenic 25.0%
!!! ATGTAAGTTGCTTTGTTTTT+AGG - chr6_1:79246694-79246713 None:intergenic 25.0%
! TTAGTTTCAGTTATCATGAT+TGG - chr6_1:79246750-79246769 None:intergenic 25.0%
!! ATGACACTTAATTGTTGTTA+TGG - chr6_1:79247060-79247079 None:intergenic 25.0%
!!! TGTATGTTTTGAATACATAC+AGG + chr6_1:79247104-79247123 Msa0894100:intron 25.0%
! AATTTCGTCTTCAAAATGAT+AGG - chr6_1:79247259-79247278 None:intergenic 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + chr6_1:79247269-79247288 Msa0894100:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG + chr6_1:79247300-79247319 Msa0894100:CDS 25.0%
!! TAAGTTGAGATATATATACC+AGG - chr6_1:79247405-79247424 None:intergenic 25.0%
!! GTAATATTTGACTTTGTCAT+GGG + chr6_1:79247537-79247556 Msa0894100:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - chr6_1:79247688-79247707 None:intergenic 25.0%
! AATATTAATGGCATACATGT+AGG + chr6_1:79247763-79247782 Msa0894100:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG - chr6_1:79248308-79248327 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG - chr6_1:79248309-79248328 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG + chr6_1:79248309-79248328 Msa0894100:CDS 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + chr6_1:79248476-79248495 Msa0894100:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG - chr6_1:79248635-79248654 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr6_1:79248692-79248711 Msa0894100:CDS 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + chr6_1:79248793-79248812 Msa0894100:intron 25.0%
! AATATATCCATCTTCAATCT+TGG + chr6_1:79248837-79248856 Msa0894100:intron 25.0%
!!! CAATCAAAATGATTTTTAGG+TGG + chr6_1:79248954-79248973 Msa0894100:intron 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG - chr6_1:79249100-79249119 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG - chr6_1:79249101-79249120 None:intergenic 25.0%
! TTCAATCAAATAACTTCATG+AGG - chr6_1:79249390-79249409 None:intergenic 25.0%
! AACTCAGTTAATAAAATCCA+TGG - chr6_1:79249472-79249491 None:intergenic 25.0%
! AATTCTTTAAATCAACAGCA+AGG + chr6_1:79246520-79246539 Msa0894100:intron 25.0%
!! AGACTGTAAATATTGTTGTT+TGG - chr6_1:79246635-79246654 None:intergenic 25.0%
!!! ATGTAAGTTGCTTTGTTTTT+AGG - chr6_1:79246694-79246713 None:intergenic 25.0%
! TTAGTTTCAGTTATCATGAT+TGG - chr6_1:79246750-79246769 None:intergenic 25.0%
!! ATGACACTTAATTGTTGTTA+TGG - chr6_1:79247060-79247079 None:intergenic 25.0%
!!! TGTATGTTTTGAATACATAC+AGG + chr6_1:79247104-79247123 Msa0894100:intron 25.0%
! AATTTCGTCTTCAAAATGAT+AGG - chr6_1:79247259-79247278 None:intergenic 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + chr6_1:79247269-79247288 Msa0894100:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG + chr6_1:79247300-79247319 Msa0894100:CDS 25.0%
!! TAAGTTGAGATATATATACC+AGG - chr6_1:79247405-79247424 None:intergenic 25.0%
!! GTAATATTTGACTTTGTCAT+GGG + chr6_1:79247537-79247556 Msa0894100:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - chr6_1:79247688-79247707 None:intergenic 25.0%
! AATATTAATGGCATACATGT+AGG + chr6_1:79247763-79247782 Msa0894100:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG - chr6_1:79248308-79248327 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG - chr6_1:79248309-79248328 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG + chr6_1:79248309-79248328 Msa0894100:CDS 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + chr6_1:79248476-79248495 Msa0894100:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG - chr6_1:79248635-79248654 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr6_1:79248692-79248711 Msa0894100:CDS 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + chr6_1:79248793-79248812 Msa0894100:intron 25.0%
! AATATATCCATCTTCAATCT+TGG + chr6_1:79248837-79248856 Msa0894100:intron 25.0%
!!! CAATCAAAATGATTTTTAGG+TGG + chr6_1:79248954-79248973 Msa0894100:intron 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG - chr6_1:79249100-79249119 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG - chr6_1:79249101-79249120 None:intergenic 25.0%
! TTCAATCAAATAACTTCATG+AGG - chr6_1:79249390-79249409 None:intergenic 25.0%
! AACTCAGTTAATAAAATCCA+TGG - chr6_1:79249472-79249491 None:intergenic 25.0%
! TGCAAAATCGATTTCTCATT+AGG - chr6_1:79246424-79246443 None:intergenic 30.0%
TTACAGTCTATACAAGATCA+AGG + chr6_1:79246646-79246665 Msa0894100:intron 30.0%
TACAGTCTATACAAGATCAA+GGG + chr6_1:79246647-79246666 Msa0894100:intron 30.0%
!!! AAGTTGCTTTGTTTTTAGGT+GGG - chr6_1:79246690-79246709 None:intergenic 30.0%
!!! TAAGTTGCTTTGTTTTTAGG+TGG - chr6_1:79246691-79246710 None:intergenic 30.0%
AAAACAAAGCAACTTACATG+TGG + chr6_1:79246695-79246714 Msa0894100:intron 30.0%
GGAATGAAACTTGATATTCT+AGG + chr6_1:79246882-79246901 Msa0894100:intron 30.0%
!!! ATCAAGTTGACTTTTTCCAA+GGG - chr6_1:79247210-79247229 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+AGG - chr6_1:79247211-79247230 None:intergenic 30.0%
! ATTGACTCAATATGTCGTTT+GGG + chr6_1:79247228-79247247 Msa0894100:CDS 30.0%
! CGTAATATTTGACTTTGTCA+TGG + chr6_1:79247536-79247555 Msa0894100:intron 30.0%
!! GTGTTTCTGAAGTACAAAAA+AGG - chr6_1:79247806-79247825 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG + chr6_1:79248120-79248139 Msa0894100:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG + chr6_1:79248126-79248145 Msa0894100:CDS 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG + chr6_1:79248546-79248565 Msa0894100:CDS 30.0%
TTTCCTTGCTTGAGAATATT+GGG - chr6_1:79248593-79248612 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - chr6_1:79248594-79248613 None:intergenic 30.0%
TAAAGCAACTTCATGTAATC+CGG - chr6_1:79249004-79249023 None:intergenic 30.0%
! GTTGCTTTATAAATCACTCT+TGG + chr6_1:79249015-79249034 Msa0894100:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - chr6_1:79249099-79249118 None:intergenic 30.0%
TGGTTATCAAATGGAAGTTT+AGG + chr6_1:79249233-79249252 Msa0894100:intron 30.0%
! AAAGTATCACCATAATCACT+TGG + chr6_1:79249349-79249368 Msa0894100:intron 30.0%
! TCATGAGGATACATTTTTCT+TGG - chr6_1:79249375-79249394 None:intergenic 30.0%
TGCAAAAAACTTATTGTCCA+TGG + chr6_1:79249608-79249627 Msa0894100:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - chr6_1:79249628-79249647 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + chr6_1:79249906-79249925 Msa0894100:CDS 30.0%
CACATATCAACAATATCAAG+TGG + chr6_1:79249937-79249956 Msa0894100:CDS 30.0%
GACAAAAGACATCTTTGATT+GGG + chr6_1:79250008-79250027 Msa0894100:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + chr6_1:79250246-79250265 Msa0894100:CDS 30.0%
TGAGGGAATATGATATGAAT+AGG + chr6_1:79250263-79250282 Msa0894100:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + chr6_1:79250264-79250283 Msa0894100:CDS 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - chr6_1:79250296-79250315 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - chr6_1:79250309-79250328 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG + chr6_1:79250308-79250327 Msa0894100:CDS 30.0%
! TGCAAAATCGATTTCTCATT+AGG - chr6_1:79246424-79246443 None:intergenic 30.0%
TTACAGTCTATACAAGATCA+AGG + chr6_1:79246646-79246665 Msa0894100:intron 30.0%
TACAGTCTATACAAGATCAA+GGG + chr6_1:79246647-79246666 Msa0894100:intron 30.0%
!!! AAGTTGCTTTGTTTTTAGGT+GGG - chr6_1:79246690-79246709 None:intergenic 30.0%
!!! TAAGTTGCTTTGTTTTTAGG+TGG - chr6_1:79246691-79246710 None:intergenic 30.0%
AAAACAAAGCAACTTACATG+TGG + chr6_1:79246695-79246714 Msa0894100:intron 30.0%
GGAATGAAACTTGATATTCT+AGG + chr6_1:79246882-79246901 Msa0894100:intron 30.0%
!!! ATCAAGTTGACTTTTTCCAA+GGG - chr6_1:79247210-79247229 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+AGG - chr6_1:79247211-79247230 None:intergenic 30.0%
! ATTGACTCAATATGTCGTTT+GGG + chr6_1:79247228-79247247 Msa0894100:CDS 30.0%
! CGTAATATTTGACTTTGTCA+TGG + chr6_1:79247536-79247555 Msa0894100:intron 30.0%
!! GTGTTTCTGAAGTACAAAAA+AGG - chr6_1:79247806-79247825 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG + chr6_1:79248120-79248139 Msa0894100:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG + chr6_1:79248126-79248145 Msa0894100:CDS 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG + chr6_1:79248546-79248565 Msa0894100:CDS 30.0%
TTTCCTTGCTTGAGAATATT+GGG - chr6_1:79248593-79248612 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - chr6_1:79248594-79248613 None:intergenic 30.0%
TAAAGCAACTTCATGTAATC+CGG - chr6_1:79249004-79249023 None:intergenic 30.0%
! GTTGCTTTATAAATCACTCT+TGG + chr6_1:79249015-79249034 Msa0894100:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - chr6_1:79249099-79249118 None:intergenic 30.0%
TGGTTATCAAATGGAAGTTT+AGG + chr6_1:79249233-79249252 Msa0894100:intron 30.0%
! AAAGTATCACCATAATCACT+TGG + chr6_1:79249349-79249368 Msa0894100:intron 30.0%
! TCATGAGGATACATTTTTCT+TGG - chr6_1:79249375-79249394 None:intergenic 30.0%
TGCAAAAAACTTATTGTCCA+TGG + chr6_1:79249608-79249627 Msa0894100:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - chr6_1:79249628-79249647 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + chr6_1:79249906-79249925 Msa0894100:CDS 30.0%
CACATATCAACAATATCAAG+TGG + chr6_1:79249937-79249956 Msa0894100:CDS 30.0%
GACAAAAGACATCTTTGATT+GGG + chr6_1:79250008-79250027 Msa0894100:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + chr6_1:79250246-79250265 Msa0894100:CDS 30.0%
TGAGGGAATATGATATGAAT+AGG + chr6_1:79250263-79250282 Msa0894100:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + chr6_1:79250264-79250283 Msa0894100:CDS 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - chr6_1:79250296-79250315 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - chr6_1:79250309-79250328 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG + chr6_1:79250308-79250327 Msa0894100:CDS 30.0%
TCCTTATGCTTCAGAATCTA+TGG + chr6_1:79246492-79246511 Msa0894100:CDS 35.0%
!! ACCATAGATTCTGAAGCATA+AGG - chr6_1:79246496-79246515 None:intergenic 35.0%
TTCTTTGCATGTCTTATGCA+GGG - chr6_1:79246608-79246627 None:intergenic 35.0%
ATTCTTTGCATGTCTTATGC+AGG - chr6_1:79246609-79246628 None:intergenic 35.0%
GTTTCAGTTATCATGATTGG+TGG - chr6_1:79246747-79246766 None:intergenic 35.0%
AATCCTGGGCTAATATTAAG+CGG - chr6_1:79246947-79246966 None:intergenic 35.0%
ATGAGAGTAACTTGAATCCT+GGG - chr6_1:79246961-79246980 None:intergenic 35.0%
AATGAGAGTAACTTGAATCC+TGG - chr6_1:79246962-79246981 None:intergenic 35.0%
! TTTTGCTTAATGCAGTCCAT+AGG + chr6_1:79247029-79247048 Msa0894100:intron 35.0%
TGTTGTTATGGATCAACCTA+TGG - chr6_1:79247048-79247067 None:intergenic 35.0%
CTTAAAAACAGAGAAACCCT+TGG + chr6_1:79247191-79247210 Msa0894100:CDS 35.0%
! GATTGACTCAATATGTCGTT+TGG + chr6_1:79247227-79247246 Msa0894100:CDS 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG + chr6_1:79247349-79247368 Msa0894100:CDS 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG + chr6_1:79247350-79247369 Msa0894100:CDS 35.0%
AGATGTGTTCAACCAATTCA+AGG + chr6_1:79248018-79248037 Msa0894100:intron 35.0%
AGGAAACTTCAGTGAAACAT+TGG + chr6_1:79248048-79248067 Msa0894100:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG - chr6_1:79248202-79248221 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG + chr6_1:79248318-79248337 Msa0894100:CDS 35.0%
! TTCCAAATTCCTTTTGATGC+AGG - chr6_1:79248363-79248382 None:intergenic 35.0%
TTGTCTTTATATACAGGTGG+TGG + chr6_1:79248479-79248498 Msa0894100:intron 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG + chr6_1:79248545-79248564 Msa0894100:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG - chr6_1:79248592-79248611 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG + chr6_1:79248649-79248668 Msa0894100:CDS 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + chr6_1:79249055-79249074 Msa0894100:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - chr6_1:79249092-79249111 None:intergenic 35.0%
! TTTTCTTGGCCAAGTGATTA+TGG - chr6_1:79249361-79249380 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG + chr6_1:79249867-79249886 Msa0894100:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG + chr6_1:79249975-79249994 Msa0894100:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + chr6_1:79249976-79249995 Msa0894100:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + chr6_1:79250007-79250026 Msa0894100:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG - chr6_1:79250045-79250064 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG + chr6_1:79250211-79250230 Msa0894100:intron 35.0%
CGTACTTGGAATGTTATATG+AGG + chr6_1:79250245-79250264 Msa0894100:CDS 35.0%
CGCTTGGAAAGATATAAATC+AGG + chr6_1:79250324-79250343 Msa0894100:CDS 35.0%
TCCTTATGCTTCAGAATCTA+TGG + chr6_1:79246492-79246511 Msa0894100:CDS 35.0%
!! ACCATAGATTCTGAAGCATA+AGG - chr6_1:79246496-79246515 None:intergenic 35.0%
TTCTTTGCATGTCTTATGCA+GGG - chr6_1:79246608-79246627 None:intergenic 35.0%
ATTCTTTGCATGTCTTATGC+AGG - chr6_1:79246609-79246628 None:intergenic 35.0%
GTTTCAGTTATCATGATTGG+TGG - chr6_1:79246747-79246766 None:intergenic 35.0%
AATCCTGGGCTAATATTAAG+CGG - chr6_1:79246947-79246966 None:intergenic 35.0%
ATGAGAGTAACTTGAATCCT+GGG - chr6_1:79246961-79246980 None:intergenic 35.0%
AATGAGAGTAACTTGAATCC+TGG - chr6_1:79246962-79246981 None:intergenic 35.0%
! TTTTGCTTAATGCAGTCCAT+AGG + chr6_1:79247029-79247048 Msa0894100:intron 35.0%
TGTTGTTATGGATCAACCTA+TGG - chr6_1:79247048-79247067 None:intergenic 35.0%
CTTAAAAACAGAGAAACCCT+TGG + chr6_1:79247191-79247210 Msa0894100:CDS 35.0%
! GATTGACTCAATATGTCGTT+TGG + chr6_1:79247227-79247246 Msa0894100:CDS 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG + chr6_1:79247349-79247368 Msa0894100:CDS 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG + chr6_1:79247350-79247369 Msa0894100:CDS 35.0%
AGATGTGTTCAACCAATTCA+AGG + chr6_1:79248018-79248037 Msa0894100:intron 35.0%
AGGAAACTTCAGTGAAACAT+TGG + chr6_1:79248048-79248067 Msa0894100:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG - chr6_1:79248202-79248221 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG + chr6_1:79248318-79248337 Msa0894100:CDS 35.0%
! TTCCAAATTCCTTTTGATGC+AGG - chr6_1:79248363-79248382 None:intergenic 35.0%
TTGTCTTTATATACAGGTGG+TGG + chr6_1:79248479-79248498 Msa0894100:intron 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG + chr6_1:79248545-79248564 Msa0894100:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG - chr6_1:79248592-79248611 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG + chr6_1:79248649-79248668 Msa0894100:CDS 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + chr6_1:79249055-79249074 Msa0894100:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - chr6_1:79249092-79249111 None:intergenic 35.0%
! TTTTCTTGGCCAAGTGATTA+TGG - chr6_1:79249361-79249380 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG + chr6_1:79249867-79249886 Msa0894100:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG + chr6_1:79249975-79249994 Msa0894100:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + chr6_1:79249976-79249995 Msa0894100:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + chr6_1:79250007-79250026 Msa0894100:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG - chr6_1:79250045-79250064 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG + chr6_1:79250211-79250230 Msa0894100:intron 35.0%
CGTACTTGGAATGTTATATG+AGG + chr6_1:79250245-79250264 Msa0894100:CDS 35.0%
CGCTTGGAAAGATATAAATC+AGG + chr6_1:79250324-79250343 Msa0894100:CDS 35.0%
AAAAATCTCCCCAAACGCTA+GGG - chr6_1:79246468-79246487 None:intergenic 40.0%
AAAAAATCTCCCCAAACGCT+AGG - chr6_1:79246469-79246488 None:intergenic 40.0%
AAACACCCTGTCCTTTGTAT+GGG - chr6_1:79246724-79246743 None:intergenic 40.0%
GGAACCTGATATGAATACTG+CGG + chr6_1:79247125-79247144 Msa0894100:intron 40.0%
ATAGCACAGCAAGAGAATGA+AGG - chr6_1:79247347-79247366 None:intergenic 40.0%
AACATTGGTCCTAGATGTTG+AGG + chr6_1:79248063-79248082 Msa0894100:CDS 40.0%
ACATTGGTCCTAGATGTTGA+GGG + chr6_1:79248064-79248083 Msa0894100:CDS 40.0%
TTAACATGCCCTCAACATCT+AGG - chr6_1:79248075-79248094 None:intergenic 40.0%
GTATGAAGCCTCACATATGA+CGG + chr6_1:79248099-79248118 Msa0894100:CDS 40.0%
!!! GAGGCTTTAGCTTTTACTTC+TGG + chr6_1:79248145-79248164 Msa0894100:CDS 40.0%
TTGCAAGAGAAGGACTCAAT+CGG - chr6_1:79248192-79248211 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG - chr6_1:79248287-79248306 None:intergenic 40.0%
! ATTCCTTTTGATGCAGGCTT+TGG - chr6_1:79248357-79248376 None:intergenic 40.0%
AGCCTGCATCAAAAGGAATT+TGG + chr6_1:79248358-79248377 Msa0894100:CDS 40.0%
!! CTTTATATACAGGTGGTGGA+AGG + chr6_1:79248483-79248502 Msa0894100:intron 40.0%
ACTACTCTATCTCGTGCATA+CGG - chr6_1:79248532-79248551 None:intergenic 40.0%
TTAGCGACCAAGATTGAAGA+TGG - chr6_1:79248847-79248866 None:intergenic 40.0%
TAGGTGGGATATTAATTGCC+TGG + chr6_1:79248970-79248989 Msa0894100:intron 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - chr6_1:79249093-79249112 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG - chr6_1:79249893-79249912 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG + chr6_1:79249970-79249989 Msa0894100:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG + chr6_1:79250062-79250081 Msa0894100:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + chr6_1:79250231-79250250 Msa0894100:CDS 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - chr6_1:79250361-79250380 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - chr6_1:79250373-79250392 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - chr6_1:79250379-79250398 None:intergenic 40.0%
GATAACTACACACACTCTGA+CGG + chr6_1:79250436-79250455 Msa0894100:CDS 40.0%
AAAAATCTCCCCAAACGCTA+GGG - chr6_1:79246468-79246487 None:intergenic 40.0%
AAAAAATCTCCCCAAACGCT+AGG - chr6_1:79246469-79246488 None:intergenic 40.0%
AAACACCCTGTCCTTTGTAT+GGG - chr6_1:79246724-79246743 None:intergenic 40.0%
GGAACCTGATATGAATACTG+CGG + chr6_1:79247125-79247144 Msa0894100:intron 40.0%
ATAGCACAGCAAGAGAATGA+AGG - chr6_1:79247347-79247366 None:intergenic 40.0%
AACATTGGTCCTAGATGTTG+AGG + chr6_1:79248063-79248082 Msa0894100:CDS 40.0%
ACATTGGTCCTAGATGTTGA+GGG + chr6_1:79248064-79248083 Msa0894100:CDS 40.0%
TTAACATGCCCTCAACATCT+AGG - chr6_1:79248075-79248094 None:intergenic 40.0%
GTATGAAGCCTCACATATGA+CGG + chr6_1:79248099-79248118 Msa0894100:CDS 40.0%
!!! GAGGCTTTAGCTTTTACTTC+TGG + chr6_1:79248145-79248164 Msa0894100:CDS 40.0%
TTGCAAGAGAAGGACTCAAT+CGG - chr6_1:79248192-79248211 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG - chr6_1:79248287-79248306 None:intergenic 40.0%
! ATTCCTTTTGATGCAGGCTT+TGG - chr6_1:79248357-79248376 None:intergenic 40.0%
AGCCTGCATCAAAAGGAATT+TGG + chr6_1:79248358-79248377 Msa0894100:CDS 40.0%
!! CTTTATATACAGGTGGTGGA+AGG + chr6_1:79248483-79248502 Msa0894100:intron 40.0%
ACTACTCTATCTCGTGCATA+CGG - chr6_1:79248532-79248551 None:intergenic 40.0%
TTAGCGACCAAGATTGAAGA+TGG - chr6_1:79248847-79248866 None:intergenic 40.0%
TAGGTGGGATATTAATTGCC+TGG + chr6_1:79248970-79248989 Msa0894100:intron 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - chr6_1:79249093-79249112 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG - chr6_1:79249893-79249912 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG + chr6_1:79249970-79249989 Msa0894100:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG + chr6_1:79250062-79250081 Msa0894100:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + chr6_1:79250231-79250250 Msa0894100:CDS 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - chr6_1:79250361-79250380 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - chr6_1:79250373-79250392 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - chr6_1:79250379-79250398 None:intergenic 40.0%
GATAACTACACACACTCTGA+CGG + chr6_1:79250436-79250455 Msa0894100:CDS 40.0%
AGATTTCCACCCTAGCGTTT+GGG + chr6_1:79246456-79246475 Msa0894100:CDS 45.0%
GCAGGGTGAATCAAATCAGT+TGG - chr6_1:79246591-79246610 None:intergenic 45.0%
!!! TTGTTTTTAGGTGGGTGTCG+TGG - chr6_1:79246682-79246701 None:intergenic 45.0%
ACATGTGGACACCCATACAA+AGG + chr6_1:79246710-79246729 Msa0894100:intron 45.0%
GAAACACCCTGTCCTTTGTA+TGG - chr6_1:79246725-79246744 None:intergenic 45.0%
CTGGGCTAATATTAAGCGGT+TGG - chr6_1:79246943-79246962 None:intergenic 45.0%
CAACCGCTTAATATTAGCCC+AGG + chr6_1:79246941-79246960 Msa0894100:intron 45.0%
TGTGCCGCAGTATTCATATC+AGG - chr6_1:79247132-79247151 None:intergenic 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + chr6_1:79247358-79247377 Msa0894100:CDS 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + chr6_1:79247366-79247385 Msa0894100:CDS 45.0%
CATGGACTTTACGTTTCACC+TGG + chr6_1:79247384-79247403 Msa0894100:CDS 45.0%
AACCAATTCAAGGACGAGCA+AGG + chr6_1:79248028-79248047 Msa0894100:CDS 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - chr6_1:79248033-79248052 None:intergenic 45.0%
ACCATGAACCGTCATATGTG+AGG - chr6_1:79248110-79248129 None:intergenic 45.0%
TGCAAGAGAAGGACTCAATC+GGG - chr6_1:79248191-79248210 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - chr6_1:79248246-79248265 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG + chr6_1:79248246-79248265 Msa0894100:CDS 45.0%
! TAACTTCTTGCCACTAGCCT+AGG - chr6_1:79248259-79248278 None:intergenic 45.0%
AGCCCCAATATTCTCAAGCA+AGG + chr6_1:79248587-79248606 Msa0894100:CDS 45.0%
GTGGGATATTAATTGCCTGG+AGG + chr6_1:79248973-79248992 Msa0894100:CDS 45.0%
TAATTGCCTGGAGGATCTTC+CGG + chr6_1:79248982-79249001 Msa0894100:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG - chr6_1:79249873-79249892 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG + chr6_1:79249875-79249894 Msa0894100:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG - chr6_1:79249919-79249938 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + chr6_1:79249951-79249970 Msa0894100:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - chr6_1:79249966-79249985 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - chr6_1:79249967-79249986 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG + chr6_1:79250055-79250074 Msa0894100:CDS 45.0%
CTGCTATACATTGCAGGCTT+AGG + chr6_1:79250061-79250080 Msa0894100:CDS 45.0%
GGATGAAATTGTGTCAAGCG+AGG + chr6_1:79250083-79250102 Msa0894100:CDS 45.0%
! CAATCTCTCGCGTTTTATCG+AGG + chr6_1:79250396-79250415 Msa0894100:CDS 45.0%
AGATTTCCACCCTAGCGTTT+GGG + chr6_1:79246456-79246475 Msa0894100:CDS 45.0%
GCAGGGTGAATCAAATCAGT+TGG - chr6_1:79246591-79246610 None:intergenic 45.0%
!!! TTGTTTTTAGGTGGGTGTCG+TGG - chr6_1:79246682-79246701 None:intergenic 45.0%
ACATGTGGACACCCATACAA+AGG + chr6_1:79246710-79246729 Msa0894100:intron 45.0%
GAAACACCCTGTCCTTTGTA+TGG - chr6_1:79246725-79246744 None:intergenic 45.0%
CTGGGCTAATATTAAGCGGT+TGG - chr6_1:79246943-79246962 None:intergenic 45.0%
CAACCGCTTAATATTAGCCC+AGG + chr6_1:79246941-79246960 Msa0894100:intron 45.0%
TGTGCCGCAGTATTCATATC+AGG - chr6_1:79247132-79247151 None:intergenic 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + chr6_1:79247358-79247377 Msa0894100:CDS 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + chr6_1:79247366-79247385 Msa0894100:CDS 45.0%
CATGGACTTTACGTTTCACC+TGG + chr6_1:79247384-79247403 Msa0894100:CDS 45.0%
AACCAATTCAAGGACGAGCA+AGG + chr6_1:79248028-79248047 Msa0894100:CDS 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - chr6_1:79248033-79248052 None:intergenic 45.0%
ACCATGAACCGTCATATGTG+AGG - chr6_1:79248110-79248129 None:intergenic 45.0%
TGCAAGAGAAGGACTCAATC+GGG - chr6_1:79248191-79248210 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - chr6_1:79248246-79248265 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG + chr6_1:79248246-79248265 Msa0894100:CDS 45.0%
! TAACTTCTTGCCACTAGCCT+AGG - chr6_1:79248259-79248278 None:intergenic 45.0%
AGCCCCAATATTCTCAAGCA+AGG + chr6_1:79248587-79248606 Msa0894100:CDS 45.0%
GTGGGATATTAATTGCCTGG+AGG + chr6_1:79248973-79248992 Msa0894100:CDS 45.0%
TAATTGCCTGGAGGATCTTC+CGG + chr6_1:79248982-79249001 Msa0894100:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG - chr6_1:79249873-79249892 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG + chr6_1:79249875-79249894 Msa0894100:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG - chr6_1:79249919-79249938 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + chr6_1:79249951-79249970 Msa0894100:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - chr6_1:79249966-79249985 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - chr6_1:79249967-79249986 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG + chr6_1:79250055-79250074 Msa0894100:CDS 45.0%
CTGCTATACATTGCAGGCTT+AGG + chr6_1:79250061-79250080 Msa0894100:CDS 45.0%
GGATGAAATTGTGTCAAGCG+AGG + chr6_1:79250083-79250102 Msa0894100:CDS 45.0%
! CAATCTCTCGCGTTTTATCG+AGG + chr6_1:79250396-79250415 Msa0894100:CDS 45.0%
!!! TTTTTTTTTTTTTTATCTAT+AGG + chr6_1:79246861-79246880 Msa0894100:intron 5.0%
!!! ATTTTATAATAATAAAAGAT+AGG + chr6_1:79247613-79247632 Msa0894100:intron 5.0%
!!! TTTTTTTTTTTTTTATCTAT+AGG + chr6_1:79246861-79246880 Msa0894100:intron 5.0%
!!! ATTTTATAATAATAAAAGAT+AGG + chr6_1:79247613-79247632 Msa0894100:intron 5.0%
CAGATTTCCACCCTAGCGTT+TGG + chr6_1:79246455-79246474 Msa0894100:CDS 50.0%
GATTTCCACCCTAGCGTTTG+GGG + chr6_1:79246457-79246476 Msa0894100:CDS 50.0%
TGGACACCCATACAAAGGAC+AGG + chr6_1:79246715-79246734 Msa0894100:intron 50.0%
GGACACCCATACAAAGGACA+GGG + chr6_1:79246716-79246735 Msa0894100:intron 50.0%
GCCTCACATATGACGGTTCA+TGG + chr6_1:79248106-79248125 Msa0894100:CDS 50.0%
TTCTGGTCACCTTGAGTCGA+TGG + chr6_1:79248162-79248181 Msa0894100:CDS 50.0%
AAGAGAAGGACTCAATCGGG+TGG - chr6_1:79248188-79248207 None:intergenic 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + chr6_1:79248239-79248258 Msa0894100:CDS 50.0%
GCTCCAAAGCCTGCATCAAA+AGG + chr6_1:79248351-79248370 Msa0894100:CDS 50.0%
!! ATACAGGTGGTGGAAGGAGT+TGG + chr6_1:79248489-79248508 Msa0894100:intron 50.0%
TGTAATCCGGAAGATCCTCC+AGG - chr6_1:79248991-79249010 None:intergenic 50.0%
CAGATTTCCACCCTAGCGTT+TGG + chr6_1:79246455-79246474 Msa0894100:CDS 50.0%
GATTTCCACCCTAGCGTTTG+GGG + chr6_1:79246457-79246476 Msa0894100:CDS 50.0%
TGGACACCCATACAAAGGAC+AGG + chr6_1:79246715-79246734 Msa0894100:intron 50.0%
GGACACCCATACAAAGGACA+GGG + chr6_1:79246716-79246735 Msa0894100:intron 50.0%
GCCTCACATATGACGGTTCA+TGG + chr6_1:79248106-79248125 Msa0894100:CDS 50.0%
TTCTGGTCACCTTGAGTCGA+TGG + chr6_1:79248162-79248181 Msa0894100:CDS 50.0%
AAGAGAAGGACTCAATCGGG+TGG - chr6_1:79248188-79248207 None:intergenic 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + chr6_1:79248239-79248258 Msa0894100:CDS 50.0%
GCTCCAAAGCCTGCATCAAA+AGG + chr6_1:79248351-79248370 Msa0894100:CDS 50.0%
!! ATACAGGTGGTGGAAGGAGT+TGG + chr6_1:79248489-79248508 Msa0894100:intron 50.0%
TGTAATCCGGAAGATCCTCC+AGG - chr6_1:79248991-79249010 None:intergenic 50.0%
AATCTCCCCAAACGCTAGGG+TGG - chr6_1:79246465-79246484 None:intergenic 55.0%
! GGTGGGTGTCGTGGTTCTTT+AGG - chr6_1:79246673-79246692 None:intergenic 55.0%
AATCTCCCCAAACGCTAGGG+TGG - chr6_1:79246465-79246484 None:intergenic 55.0%
! GGTGGGTGTCGTGGTTCTTT+AGG - chr6_1:79246673-79246692 None:intergenic 55.0%
!! ATCGGGTGGCCATCGACTCA+AGG - chr6_1:79248174-79248193 None:intergenic 60.0%
!! ATCGGGTGGCCATCGACTCA+AGG - chr6_1:79248174-79248193 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 79246397 79250510 79246397 ID=Msa0894100;Name=Msa0894100
chr6_1 mRNA 79246397 79250510 79246397 ID=Msa0894100-mRNA-1;Parent=Msa0894100;Name=Msa0894100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|7|0|556
chr6_1 exon 79246397 79246513 79246397 ID=Msa0894100-mRNA-1:exon:13271;Parent=Msa0894100-mRNA-1
chr6_1 exon 79247126 79247405 79247126 ID=Msa0894100-mRNA-1:exon:13272;Parent=Msa0894100-mRNA-1
chr6_1 exon 79248020 79248392 79248020 ID=Msa0894100-mRNA-1:exon:13273;Parent=Msa0894100-mRNA-1
chr6_1 exon 79248495 79248713 79248495 ID=Msa0894100-mRNA-1:exon:13274;Parent=Msa0894100-mRNA-1
chr6_1 exon 79248973 79249111 79248973 ID=Msa0894100-mRNA-1:exon:13275;Parent=Msa0894100-mRNA-1
chr6_1 exon 79249856 79250104 79249856 ID=Msa0894100-mRNA-1:exon:13276;Parent=Msa0894100-mRNA-1
chr6_1 exon 79250217 79250510 79250217 ID=Msa0894100-mRNA-1:exon:13277;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79246397 79246513 79246397 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79247126 79247405 79247126 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79248020 79248392 79248020 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79248495 79248713 79248495 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79248973 79249111 79248973 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79249856 79250104 79249856 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
chr6_1 CDS 79250217 79250510 79250217 ID=Msa0894100-mRNA-1:cds;Parent=Msa0894100-mRNA-1
Gene Sequence

>Msa0894100

ATGTCTTCAGCAGATTACATCAATCCTAATGAGAAATCGATTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTTTGGGGAGATTTTTTCATTCCTTATGCTTCAGAATCTATGGAACCTGATATGAATACTGCGGCACAAATTGATAAACTAAAAACGAAGGTTAGACAAATGCTTGTCTTAAAAACAGAGAAACCCTTGGAAAAAGTCAACTTGATTGACTCAATATGTCGTTTGGGTGTGACCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCTCTTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTACGTTTCACCTGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACATTGGTCCTAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGACGGTTCATGGTGAAAAAATATTGGAAGAGGCTTTAGCTTTTACTTCTGGTCACCTTGAGTCGATGGCCACCCGATTGAGTCCTTCTCTTGCAACACAAGTAAAACAAAGCTTAAGACAATCTCTCCGCAAAAACTTGCCTAGGCTAGTGGCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTGCATTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTGCATCAAAAGGAATTTGGAAACATTAGCAAGTGGTGGAAGGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTAGAATGTTGCTTTTGGGTTATGACAGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATATGATGCATATGGAACTATTGATGAATTAGAACTTTTTACTAAGGCAATTGAAAGGTGGGATATTAATTGCCTGGAGGATCTTCCGGATTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGATTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTGGAATGTTATATGAGGGAATATGATATGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGAAGTTCCGTTACCTATTCTGACGTGTGTTCTCAATCTCTCGCGTTTTATCGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGACTAATGAAGACATATATTAATGATTTGCTTGTCAATCCTTTAGAAATTTGA
Protein sequence

>Msa0894100

MSSADYINPNEKSILQRNVADFHPSVWGDFFIPYASESMEPDMNTAAQIDKLKTKVRQMLVLKTEKPLEKVNLIDSICRLGVTYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSLAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETLVLDVEGMLNLYEASHMTVHGEKILEEALAFTSGHLESMATRLSPSLATQVKQSLRQSLRKNLPRLVARSYISIYEQDSSHNEILLALAKLDFNMLQSLHQKEFGNISKWWKELDIAQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTKAIERWDINCLEDLPDYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDMNREAAIQECQKKIDNAWKDINQECLKPTEVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPLEI*