Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011460 | XP_003621844.1 | 89.590 | 317 | 22 | 3 | 1 | 308 | 1 | 315 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011460 | sp|Q8L719|THO4B_ARATH | 40.796 | 201 | 85 | 3 | 1 | 168 | 1 | 200 | 3.28e-33 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011460 | G7KWS3 | 89.590 | 317 | 22 | 3 | 1 | 308 | 1 | 315 | 0.0 | 569 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025580 | Msa1011460 | 0.810807 | 9.591913e-51 | -8.615850e-47 |
| Msa0035340 | Msa1011460 | 0.839041 | 2.008070e-57 | -8.615850e-47 |
| Msa0035380 | Msa1011460 | 0.819101 | 1.386050e-52 | -8.615850e-47 |
| Msa0815920 | Msa1011460 | 0.823270 | 1.516242e-53 | -8.615850e-47 |
| Msa0136650 | Msa1011460 | 0.815085 | 1.107757e-51 | -8.615850e-47 |
| Msa0380620 | Msa1011460 | 0.814138 | 1.794704e-51 | -8.615850e-47 |
| Msa0430260 | Msa1011460 | 0.813160 | 2.946576e-51 | -8.615850e-47 |
| Msa0981320 | Msa1011460 | 0.809014 | 2.333074e-50 | -8.615850e-47 |
| Msa1011460 | Msa1037640 | 0.801859 | 7.379839e-49 | -8.615850e-47 |
| Msa1011460 | Msa1045140 | 0.833468 | 5.241916e-56 | -8.615850e-47 |
| Msa1011460 | Msa1053080 | 0.870810 | 1.101554e-66 | -8.615850e-47 |
| Msa1011460 | Msa1113340 | 0.801215 | 1.000352e-48 | -8.615850e-47 |
| Msa1011460 | Msa1160910 | 0.832088 | 1.154189e-55 | -8.615850e-47 |
| Msa1011460 | Msa1167470 | 0.804318 | 2.287835e-49 | -8.615850e-47 |
| Msa1011460 | Msa1321340 | 0.801170 | 1.021530e-48 | -8.615850e-47 |
| Msa1011460 | Msa1462490 | 0.815117 | 1.089544e-51 | -8.615850e-47 |
| Msa0283800 | Msa1011460 | 0.802424 | 5.646657e-49 | -8.615850e-47 |
| Msa0292400 | Msa1011460 | 0.804407 | 2.192692e-49 | -8.615850e-47 |
| Msa0304930 | Msa1011460 | 0.817175 | 3.779210e-52 | -8.615850e-47 |
| Msa0530780 | Msa1011460 | 0.816939 | 4.270700e-52 | -8.615850e-47 |
| Msa0869780 | Msa1011460 | 0.821078 | 4.888250e-53 | -8.615850e-47 |
| Msa0903180 | Msa1011460 | 0.812252 | 4.654139e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011460 | MtrunA17_Chr7g0223041 | 89.590 | 317 | 22 | 3 | 1 | 308 | 1 | 315 | 0.0 | 569 |
| Msa1011460 | MtrunA17_Chr4g0031081 | 62.500 | 88 | 33 | 0 | 76 | 163 | 94 | 181 | 1.97e-33 | 123 |
| Msa1011460 | MtrunA17_Chr3g0110401 | 56.989 | 93 | 40 | 0 | 76 | 168 | 29 | 121 | 1.18e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011460 | AT5G02530.1 | 40.796 | 201 | 85 | 3 | 1 | 168 | 1 | 200 | 3.33e-34 | 126 |
| Msa1011460 | AT5G02530.2 | 40.796 | 201 | 85 | 3 | 1 | 168 | 1 | 200 | 3.93e-34 | 126 |
| Msa1011460 | AT5G59950.4 | 42.246 | 187 | 75 | 6 | 1 | 165 | 1 | 176 | 1.01e-32 | 120 |
| Msa1011460 | AT5G59950.3 | 42.703 | 185 | 75 | 6 | 1 | 165 | 1 | 174 | 1.19e-32 | 121 |
| Msa1011460 | AT5G59950.5 | 42.246 | 187 | 75 | 6 | 1 | 165 | 1 | 176 | 1.98e-32 | 120 |
| Msa1011460 | AT5G59950.1 | 42.246 | 187 | 75 | 6 | 1 | 165 | 1 | 176 | 2.00e-32 | 120 |
| Msa1011460 | AT5G59950.2 | 61.111 | 90 | 34 | 1 | 76 | 165 | 22 | 110 | 1.44e-31 | 116 |
| Msa1011460 | AT5G37720.2 | 53.409 | 88 | 39 | 1 | 76 | 163 | 93 | 178 | 4.19e-24 | 99.4 |
| Msa1011460 | AT5G37720.1 | 53.409 | 88 | 39 | 1 | 76 | 163 | 93 | 178 | 4.78e-24 | 99.4 |
| Msa1011460 | AT1G66260.2 | 45.361 | 97 | 52 | 1 | 76 | 171 | 107 | 203 | 4.88e-23 | 97.1 |
| Msa1011460 | AT1G66260.1 | 45.361 | 97 | 52 | 1 | 76 | 171 | 107 | 203 | 4.88e-23 | 97.1 |
Find 100 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTCATTATGATCAATT+TGG | 0.135951 | 7_1:+15742351 | Msa1011460:CDS |
| ATGCTATTAGTTACCGAATT+TGG | 0.165877 | 7_1:+15743382 | Msa1011460:three_prime_UTR |
| TACAGGGAAGAAAGAAAATT+TGG | 0.190188 | 7_1:+15742981 | Msa1011460:intron |
| TTTGGCAGATTTAATGTCTT+TGG | 0.207264 | 7_1:+15743341 | Msa1011460:three_prime_UTR |
| GTCTAGGCCGGCTGGCATTT+TGG | 0.219083 | 7_1:-15739361 | None:intergenic |
| ATTTGGTTCGGGCGCTTAAA+AGG | 0.224350 | 7_1:+15743399 | Msa1011460:three_prime_UTR |
| GGGCGCTTAAAAGGTATATT+TGG | 0.235209 | 7_1:+15743408 | Msa1011460:three_prime_UTR |
| ATTTGTCTAACTTGGATCAT+AGG | 0.238262 | 7_1:+15739687 | Msa1011460:CDS |
| AGGATTATGGTCATATGTTT+TGG | 0.240436 | 7_1:+15743245 | Msa1011460:three_prime_UTR |
| TATGAGCTCTGGAACAAATT+TGG | 0.244923 | 7_1:+15742593 | Msa1011460:CDS |
| CGTGTATGGTCATTCTTTCT+TGG | 0.293872 | 7_1:-15743050 | None:intergenic |
| CACTTGAAACTTCAAAGTTT+TGG | 0.298618 | 7_1:+15743323 | Msa1011460:three_prime_UTR |
| CACCTTGCAAAGACATCATT+TGG | 0.314256 | 7_1:-15742549 | None:intergenic |
| CCATTCATTATGATCAATTT+GGG | 0.320300 | 7_1:+15742352 | Msa1011460:CDS |
| CACCTTGCAAAGACATCATT+TGG | 0.323688 | 7_1:-15742663 | None:intergenic |
| ACTCCTGCTGCTGCGCCTCT+TGG | 0.343069 | 7_1:+15742504 | Msa1011460:CDS |
| TGTTCCTCAAGAAATGGTTT+TGG | 0.343432 | 7_1:+15739628 | Msa1011460:CDS |
| TTAAGCGCCCGAACCAAATT+CGG | 0.346404 | 7_1:-15743395 | None:intergenic |
| TGAGCTTGTTGGAGCAAGTT+TGG | 0.346832 | 7_1:+15742479 | Msa1011460:CDS |
| CACCTTACAAAGACATCATT+TGG | 0.348640 | 7_1:-15742738 | None:intergenic |
| AAGTATTGGATAAAGGATTA+TGG | 0.355186 | 7_1:+15743232 | Msa1011460:three_prime_UTR |
| CATGAGCTATGGAACAAGTT+TGG | 0.358886 | 7_1:+15742707 | Msa1011460:CDS |
| TCTTGGTCGAAGTAGCTTAC+TGG | 0.368386 | 7_1:+15742635 | Msa1011460:CDS |
| TCGCAGACACCGTTGGAATC+TGG | 0.370912 | 7_1:-15743085 | None:intergenic |
| GACCTATTTACTCATATAAT+CGG | 0.373037 | 7_1:-15743205 | None:intergenic |
| CAAGTTAGACAAATAGAGTT+TGG | 0.373882 | 7_1:-15739678 | None:intergenic |
| CAAACTCTATTTGTCTAACT+TGG | 0.383083 | 7_1:+15739679 | Msa1011460:CDS |
| GTATCGCTCAGAGGCTATAA+AGG | 0.384686 | 7_1:+15743133 | Msa1011460:CDS |
| ATTAGTTACCGAATTTGGTT+CGG | 0.387530 | 7_1:+15743387 | Msa1011460:three_prime_UTR |
| CTTGGACAAAGTAGCTTACT+AGG | 0.389224 | 7_1:+15742522 | Msa1011460:CDS |
| GTCAGAAAAGTATTGGATAA+AGG | 0.392012 | 7_1:+15743225 | Msa1011460:three_prime_UTR |
| TTAGTTACCGAATTTGGTTC+GGG | 0.396580 | 7_1:+15743388 | Msa1011460:three_prime_UTR |
| TACAACAATATGAAGCTTGA+TGG | 0.409513 | 7_1:+15742441 | Msa1011460:CDS |
| ACAGCTGTTGTTCTCGGAAG+AGG | 0.419689 | 7_1:+15742311 | Msa1011460:intron |
| GATCAATTTGGGAGATCAAA+AGG | 0.422082 | 7_1:+15742363 | Msa1011460:CDS |
| ACATTGCAAATTGAGCTTGT+TGG | 0.429062 | 7_1:+15742468 | Msa1011460:CDS |
| GACAAATAGAGTTTGGTGAT+AGG | 0.440244 | 7_1:-15739671 | None:intergenic |
| TTTGTCTAACTTGGATCATA+GGG | 0.444838 | 7_1:+15739688 | Msa1011460:CDS |
| GGTCATTCTTTCTTGGAAGA+TGG | 0.446766 | 7_1:-15743043 | None:intergenic |
| GAAAACAAAGGAAAAGGAAA+GGG | 0.450056 | 7_1:+15743155 | Msa1011460:CDS |
| CCCAAATTGATCATAATGAA+TGG | 0.454862 | 7_1:-15742352 | None:intergenic |
| TTCCGATTATATGAGTAAAT+AGG | 0.461828 | 7_1:+15743203 | Msa1011460:three_prime_UTR |
| TGTCCAAGAGGCGCAGCAGC+AGG | 0.466031 | 7_1:-15742507 | None:intergenic |
| CAGCAGAAGTTGTCTTTACA+AGG | 0.468637 | 7_1:+15742388 | Msa1011460:CDS |
| AGTCCTGGTCTTATGAGCTC+TGG | 0.470269 | 7_1:+15742582 | Msa1011460:CDS |
| TAAATAGGTCAGAAAAGTAT+TGG | 0.472122 | 7_1:+15743218 | Msa1011460:three_prime_UTR |
| AAGTACCTGAGAGTGAGAAA+TGG | 0.473990 | 7_1:-15739484 | None:intergenic |
| AGGAGAACGGGAGTAAGAGT+AGG | 0.474294 | 7_1:-15739338 | None:intergenic |
| AGGTGTCAAATTCCGACTCC+TGG | 0.478241 | 7_1:+15742681 | Msa1011460:CDS |
| GGAGAACGGGAGTAAGAGTA+GGG | 0.480728 | 7_1:-15739337 | None:intergenic |
| GTGGCGAGTTGGTCTGTGGT+TGG | 0.480813 | 7_1:-15739421 | None:intergenic |
| ATAAAGGAAAACAAAGGAAA+AGG | 0.481850 | 7_1:+15743149 | Msa1011460:CDS |
| GCAAACATATTGGCTTTAGC+TGG | 0.487973 | 7_1:-15743431 | None:intergenic |
| ACTCCTGCTGATATGCCTCT+TGG | 0.494809 | 7_1:+15742618 | Msa1011460:CDS |
| TGATGATGTTCCTCAAGAAA+TGG | 0.502259 | 7_1:+15739622 | Msa1011460:CDS |
| GTACTCCATTTCTCACTCTC+AGG | 0.503892 | 7_1:+15739479 | Msa1011460:CDS |
| TAATACATGAATGTCTTCGT+TGG | 0.505479 | 7_1:-15739714 | None:intergenic |
| AAAGAAAATTTGGAGGTAGC+AGG | 0.508686 | 7_1:+15742991 | Msa1011460:CDS |
| AGGTGCAAAATTCCAAGTCC+TGG | 0.511611 | 7_1:+15742567 | Msa1011460:CDS |
| GTTGGAGGTGCGGCGGTGAG+TGG | 0.513530 | 7_1:-15739403 | None:intergenic |
| GAGCTCATAAGACCAGGACT+TGG | 0.514703 | 7_1:-15742579 | None:intergenic |
| AGGGAAGAAAGAAAATTTGG+AGG | 0.515320 | 7_1:+15742984 | Msa1011460:intron |
| GACCAAATGATGTCTTTGTA+AGG | 0.515429 | 7_1:+15742736 | Msa1011460:CDS |
| CTTGGTCGAAGTAGCTTACT+GGG | 0.517273 | 7_1:+15742636 | Msa1011460:CDS |
| CAGCTGTTGTTCTCGGAAGA+GGG | 0.519739 | 7_1:+15742312 | Msa1011460:intron |
| GGAAAACAAAGGAAAAGGAA+AGG | 0.524023 | 7_1:+15743154 | Msa1011460:CDS |
| CTTGGAAGATGGCCATGTGT+TGG | 0.526872 | 7_1:-15743032 | None:intergenic |
| AGTGACATGTCTAGGCCGGC+TGG | 0.531260 | 7_1:-15739369 | None:intergenic |
| ACTCCTGGTTTCATGAGCTA+TGG | 0.536177 | 7_1:+15742696 | Msa1011460:CDS |
| CGACCAAGAGGCATATCAGC+AGG | 0.536972 | 7_1:-15742621 | None:intergenic |
| GTCTGTGGTTGGAGGTGCGG+CGG | 0.537574 | 7_1:-15739410 | None:intergenic |
| AGATCTTTCGCAGACACCGT+TGG | 0.563012 | 7_1:-15743092 | None:intergenic |
| TTTCGTCGAGTGACATGTCT+AGG | 0.564360 | 7_1:-15739377 | None:intergenic |
| TGATCCAAAACCATTTCTTG+AGG | 0.565878 | 7_1:-15739632 | None:intergenic |
| GTTCTCGGAAGAGGGTGAGT+TGG | 0.566196 | 7_1:+15742320 | Msa1011460:CDS |
| GCGAGTTGGTCTGTGGTTGG+AGG | 0.570792 | 7_1:-15739418 | None:intergenic |
| GTCGAGTGACATGTCTAGGC+CGG | 0.574701 | 7_1:-15739373 | None:intergenic |
| TTGGTCTGTGGTTGGAGGTG+CGG | 0.578364 | 7_1:-15739413 | None:intergenic |
| TTCTCCTCCAAAATGCCAGC+CGG | 0.579942 | 7_1:+15739354 | Msa1011460:exon |
| TGAGAGTGAGAAATGGAGTA+CGG | 0.588394 | 7_1:-15739477 | None:intergenic |
| TGTCTTTACAAGGCAGTCTG+AGG | 0.591733 | 7_1:+15742398 | Msa1011460:CDS |
| CACAGACCAACTCGCCACCT+CGG | 0.593169 | 7_1:+15739426 | Msa1011460:CDS |
| CGAACGCCGAGGTGGCGAGT+TGG | 0.593959 | 7_1:-15739432 | None:intergenic |
| GTTCCATAGCTCATGAAACC+AGG | 0.598365 | 7_1:-15742699 | None:intergenic |
| GAAAGATCTTGATGAAGACT+TGG | 0.606384 | 7_1:+15743106 | Msa1011460:CDS |
| AACCAAATGATGTCTTTGCA+AGG | 0.608753 | 7_1:+15742547 | Msa1011460:CDS |
| GTTCCAGAGCTCATAAGACC+AGG | 0.611855 | 7_1:-15742585 | None:intergenic |
| AGCCAAATGATGTCTTTGCA+AGG | 0.612404 | 7_1:+15742661 | Msa1011460:CDS |
| AGGCTTTAGCAGCTCTCAAG+AGG | 0.614864 | 7_1:+15742418 | Msa1011460:CDS |
| TTTGGATTCTGATTTACATG+AGG | 0.615711 | 7_1:+15743263 | Msa1011460:three_prime_UTR |
| GAGGCTATAAAGGAAAACAA+AGG | 0.623218 | 7_1:+15743143 | Msa1011460:CDS |
| ATCTTGATGAAGACTTGGAG+AGG | 0.624037 | 7_1:+15743111 | Msa1011460:CDS |
| AGTAAGCTACTTTGTCCAAG+AGG | 0.629482 | 7_1:-15742519 | None:intergenic |
| AGCAAAACGCCAGATTCCAA+CGG | 0.644000 | 7_1:+15743076 | Msa1011460:CDS |
| TAGCTCATGAAACCAGGAGT+CGG | 0.649403 | 7_1:-15742693 | None:intergenic |
| CTTGGAGAGGTATCGCTCAG+AGG | 0.658554 | 7_1:+15743124 | Msa1011460:CDS |
| AGTAAGCTACTTCGACCAAG+AGG | 0.658801 | 7_1:-15742633 | None:intergenic |
| CGAGGTGGCGAGTTGGTCTG+TGG | 0.663681 | 7_1:-15739425 | None:intergenic |
| AGTTGCTGCGAACGCCGAGG+TGG | 0.671552 | 7_1:-15739440 | None:intergenic |
| AATAGCTTTACACCAACACA+TGG | 0.696198 | 7_1:+15743020 | Msa1011460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTCATATTATATTGA+TGG | + | chr7_1:15740340-15740359 | Msa1011460:intron | 10.0% |
| !!! | TATTTTTCATATTATATTGA+TGG | + | chr7_1:15740340-15740359 | Msa1011460:intron | 10.0% |
| !! | GATGAAAATAATAAAAATAA+AGG | - | chr7_1:15741373-15741392 | None:intergenic | 10.0% |
| !!! | TTTTTTTACAACAAAAAAAA+AGG | - | chr7_1:15742232-15742251 | None:intergenic | 10.0% |
| !!! | CTTATTTATATCTGTAATTT+TGG | + | chr7_1:15739977-15739996 | Msa1011460:intron | 15.0% |
| !!! | CAAATTTATATGAAATTTTG+TGG | - | chr7_1:15740372-15740391 | None:intergenic | 15.0% |
| !!! | TTAATAGATTTTCTTTCATA+AGG | + | chr7_1:15741585-15741604 | Msa1011460:intron | 15.0% |
| !!! | TTTTGTTGTAAAAAAATACT+AGG | + | chr7_1:15742236-15742255 | Msa1011460:intron | 15.0% |
| !!! | TTGATACTATTTTTTTTTAC+AGG | + | chr7_1:15742964-15742983 | Msa1011460:intron | 15.0% |
| !!! | TGATACTATTTTTTTTTACA+GGG | + | chr7_1:15742965-15742984 | Msa1011460:intron | 15.0% |
| !!! | ACAACAAGTCATTTTTTTAA+CGG | - | chr7_1:15739892-15739911 | None:intergenic | 20.0% |
| !!! | AGAAACTTATGATACATTTT+TGG | + | chr7_1:15740445-15740464 | Msa1011460:intron | 20.0% |
| !! | CTAAATAAAATCTTATCAAG+TGG | - | chr7_1:15740492-15740511 | None:intergenic | 20.0% |
| !!! | ATAAGATTTTATTTAGTAGC+TGG | + | chr7_1:15740496-15740515 | Msa1011460:intron | 20.0% |
| !! | GATGGAAATAATAAAAATAG+AGG | - | chr7_1:15740601-15740620 | None:intergenic | 20.0% |
| !!! | TATAGTTTTTATTATGTGAG+AGG | + | chr7_1:15741050-15741069 | Msa1011460:intron | 20.0% |
| !!! | ATAGTTTTTATTATGTGAGA+GGG | + | chr7_1:15741051-15741070 | Msa1011460:intron | 20.0% |
| !!! | GCAAATTATATGAAATTTTG+TGG | - | chr7_1:15741186-15741205 | None:intergenic | 20.0% |
| !! | ACTACTAAAATCTTATTAAG+TGG | - | chr7_1:15741269-15741288 | None:intergenic | 20.0% |
| !!! | CTTAATAAGATTTTAGTAGT+TGG | + | chr7_1:15741269-15741288 | Msa1011460:intron | 20.0% |
| ! | TGATTACATTGAATTGTGTT+AGG | + | chr7_1:15740146-15740165 | Msa1011460:intron | 25.0% |
| ! | GATTACATTGAATTGTGTTA+GGG | + | chr7_1:15740147-15740166 | Msa1011460:intron | 25.0% |
| ! | AATCTATCATCTATGATACA+CGG | - | chr7_1:15740206-15740225 | None:intergenic | 25.0% |
| !!! | TATTGTTGTTATTTTGTGAG+AGG | + | chr7_1:15740236-15740255 | Msa1011460:intron | 25.0% |
| !!! | ATTGTTGTTATTTTGTGAGA+GGG | + | chr7_1:15740237-15740256 | Msa1011460:intron | 25.0% |
| ! | TCTACAACTAAGTAATATTG+TGG | + | chr7_1:15740395-15740414 | Msa1011460:intron | 25.0% |
| !!! | ATTTTATTTAGTAGCTGGAA+TGG | + | chr7_1:15740501-15740520 | Msa1011460:intron | 25.0% |
| ! | AATTAAGTAGTAGTACATCA+GGG | + | chr7_1:15740750-15740769 | Msa1011460:intron | 25.0% |
| !! | TCTAATGGTTTTCTTTCATA+AGG | + | chr7_1:15740815-15740834 | Msa1011460:intron | 25.0% |
| !! | TAGTTTTTATTATGTGAGAG+GGG | + | chr7_1:15741052-15741071 | Msa1011460:intron | 25.0% |
| ! | TTGTTAAATAGCATCTATAG+CGG | - | chr7_1:15741127-15741146 | None:intergenic | 25.0% |
| !!! | GAAGCTTATGATACATTTTT+TGG | + | chr7_1:15741223-15741242 | Msa1011460:intron | 25.0% |
| !!! | TAAGATTTTAGTAGTTGGAT+TGG | + | chr7_1:15741274-15741293 | Msa1011460:intron | 25.0% |
| ! | GATATGACTTATGAGAAATT+TGG | - | chr7_1:15741413-15741432 | None:intergenic | 25.0% |
| ! | AAAAAATATACCAGAGTATG+TGG | - | chr7_1:15741616-15741635 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTCTCTGCATTAT+TGG | + | chr7_1:15741852-15741871 | Msa1011460:intron | 25.0% |
| ! | TGGTGTATGAATCTTAATTT+GGG | + | chr7_1:15742026-15742045 | Msa1011460:intron | 25.0% |
| !! | TCTTTTATGTCCTCTTTTAA+AGG | + | chr7_1:15742068-15742087 | Msa1011460:intron | 25.0% |
| !! | CTTTGATTTACCTTTAAAAG+AGG | - | chr7_1:15742081-15742100 | None:intergenic | 25.0% |
| !!! | AAAAAGGTTCTGAAAAGAAA+GGG | - | chr7_1:15742216-15742235 | None:intergenic | 25.0% |
| !!! | AAAAAAGGTTCTGAAAAGAA+AGG | - | chr7_1:15742217-15742236 | None:intergenic | 25.0% |
| ! | TCCATTCATTATGATCAATT+TGG | + | chr7_1:15742351-15742370 | Msa1011460:CDS | 25.0% |
| ! | CCATTCATTATGATCAATTT+GGG | + | chr7_1:15742352-15742371 | Msa1011460:CDS | 25.0% |
| ! | AGTTTATTAGATGTTACACA+AGG | - | chr7_1:15742843-15742862 | None:intergenic | 25.0% |
| ! | ATAAAGGAAAACAAAGGAAA+AGG | + | chr7_1:15743149-15743168 | Msa1011460:CDS | 25.0% |
| ! | TTCCGATTATATGAGTAAAT+AGG | + | chr7_1:15743203-15743222 | Msa1011460:three_prime_UTR | 25.0% |
| ! | GACCTATTTACTCATATAAT+CGG | - | chr7_1:15743208-15743227 | None:intergenic | 25.0% |
| !! | TAAATAGGTCAGAAAAGTAT+TGG | + | chr7_1:15743218-15743237 | Msa1011460:three_prime_UTR | 25.0% |
| !!! | AAGTATTGGATAAAGGATTA+TGG | + | chr7_1:15743232-15743251 | Msa1011460:three_prime_UTR | 25.0% |
| !!! | AGTTTGGTGATAGGATTTTT+TGG | - | chr7_1:15739665-15739684 | None:intergenic | 30.0% |
| CAAGTTAGACAAATAGAGTT+TGG | - | chr7_1:15739681-15739700 | None:intergenic | 30.0% | |
| CAAACTCTATTTGTCTAACT+TGG | + | chr7_1:15739679-15739698 | Msa1011460:CDS | 30.0% | |
| ATTTGTCTAACTTGGATCAT+AGG | + | chr7_1:15739687-15739706 | Msa1011460:CDS | 30.0% | |
| TTTGTCTAACTTGGATCATA+GGG | + | chr7_1:15739688-15739707 | Msa1011460:CDS | 30.0% | |
| TAATACATGAATGTCTTCGT+TGG | - | chr7_1:15739717-15739736 | None:intergenic | 30.0% | |
| TTGTTAAATAGCATCCATAG+CGG | - | chr7_1:15740313-15740332 | None:intergenic | 30.0% | |
| GACTGAATAACACAAATAGA+TGG | - | chr7_1:15740619-15740638 | None:intergenic | 30.0% | |
| GGTATGACTTATGAGAAATT+TGG | - | chr7_1:15740641-15740660 | None:intergenic | 30.0% | |
| CAATTAAGTAGTAGTACATC+AGG | + | chr7_1:15740749-15740768 | Msa1011460:intron | 30.0% | |
| CTGTGCATTTCATATTCTAA+TGG | + | chr7_1:15740800-15740819 | Msa1011460:intron | 30.0% | |
| ! | TAGATGCTATTTAACAACAC+TGG | + | chr7_1:15741130-15741149 | Msa1011460:intron | 30.0% |
| GTTATTGAGCCAAAATAACT+TGG | + | chr7_1:15741317-15741336 | Msa1011460:intron | 30.0% | |
| ! | ACCTTTAAGCCAAGTTATTT+TGG | - | chr7_1:15741329-15741348 | None:intergenic | 30.0% |
| TCATAAGTCATATCAGTCTT+TGG | + | chr7_1:15741419-15741438 | Msa1011460:intron | 30.0% | |
| !!! | CATATCAGTCTTTGGTTTTA+TGG | + | chr7_1:15741427-15741446 | Msa1011460:intron | 30.0% |
| ATCTTGATGAATGAAGTACA+CGG | + | chr7_1:15740712-15740731 | Msa1011460:intron | 30.0% | |
| !!! | TTTTAGCTTCTCTGCATTAT+TGG | + | chr7_1:15741754-15741773 | Msa1011460:intron | 30.0% |
| TTCATACACCAGATTGATAT+GGG | - | chr7_1:15742017-15742036 | None:intergenic | 30.0% | |
| ATTCATACACCAGATTGATA+TGG | - | chr7_1:15742018-15742037 | None:intergenic | 30.0% | |
| CTGGTGTATGAATCTTAATT+TGG | + | chr7_1:15742025-15742044 | Msa1011460:intron | 30.0% | |
| GAGTCATTATTGCAATTAGA+AGG | + | chr7_1:15742100-15742119 | Msa1011460:intron | 30.0% | |
| GATGAAGATGAAGATCAATT+GGG | - | chr7_1:15742174-15742193 | None:intergenic | 30.0% | |
| TGATGAAGATGAAGATCAAT+TGG | - | chr7_1:15742175-15742194 | None:intergenic | 30.0% | |
| !! | AAAAGGTTCTGAAAAGAAAG+GGG | - | chr7_1:15742215-15742234 | None:intergenic | 30.0% |
| ! | TATTTTACAGCTGTTGTTCT+CGG | + | chr7_1:15742305-15742324 | Msa1011460:intron | 30.0% |
| CCCAAATTGATCATAATGAA+TGG | - | chr7_1:15742355-15742374 | None:intergenic | 30.0% | |
| TACAACAATATGAAGCTTGA+TGG | + | chr7_1:15742441-15742460 | Msa1011460:CDS | 30.0% | |
| TACAGGGAAGAAAGAAAATT+TGG | + | chr7_1:15742981-15743000 | Msa1011460:intron | 30.0% | |
| GAAAACAAAGGAAAAGGAAA+GGG | + | chr7_1:15743155-15743174 | Msa1011460:CDS | 30.0% | |
| !! | GTCAGAAAAGTATTGGATAA+AGG | + | chr7_1:15743225-15743244 | Msa1011460:three_prime_UTR | 30.0% |
| ! | AGGATTATGGTCATATGTTT+TGG | + | chr7_1:15743245-15743264 | Msa1011460:three_prime_UTR | 30.0% |
| TTTGGATTCTGATTTACATG+AGG | + | chr7_1:15743263-15743282 | Msa1011460:three_prime_UTR | 30.0% | |
| ! | CACTTGAAACTTCAAAGTTT+TGG | + | chr7_1:15743323-15743342 | Msa1011460:three_prime_UTR | 30.0% |
| TTTGGCAGATTTAATGTCTT+TGG | + | chr7_1:15743341-15743360 | Msa1011460:three_prime_UTR | 30.0% | |
| ATGCTATTAGTTACCGAATT+TGG | + | chr7_1:15743382-15743401 | Msa1011460:three_prime_UTR | 30.0% | |
| ATTAGTTACCGAATTTGGTT+CGG | + | chr7_1:15743387-15743406 | Msa1011460:three_prime_UTR | 30.0% | |
| ATTCATGAAAATGCAGATGC+TGG | + | chr7_1:15739571-15739590 | Msa1011460:intron | 35.0% | |
| ! | TGATGATGTTCCTCAAGAAA+TGG | + | chr7_1:15739622-15739641 | Msa1011460:CDS | 35.0% |
| ! | TGTTCCTCAAGAAATGGTTT+TGG | + | chr7_1:15739628-15739647 | Msa1011460:CDS | 35.0% |
| TGATCCAAAACCATTTCTTG+AGG | - | chr7_1:15739635-15739654 | None:intergenic | 35.0% | |
| !!! | GTGATAGGATTTTTTGGTTG+AGG | - | chr7_1:15739659-15739678 | None:intergenic | 35.0% |
| ! | GACAAATAGAGTTTGGTGAT+AGG | - | chr7_1:15739674-15739693 | None:intergenic | 35.0% |
| ATCATGTGTCAATGTCATGT+TGG | - | chr7_1:15740098-15740117 | None:intergenic | 35.0% | |
| AGCTAAGTAACTTGGCTTAA+AGG | + | chr7_1:15740553-15740572 | Msa1011460:intron | 35.0% | |
| TCATAAGTCATACCAGTCTT+TGG | + | chr7_1:15740647-15740666 | Msa1011460:intron | 35.0% | |
| !!! | CATACCAGTCTTTGGTTTTA+TGG | + | chr7_1:15740655-15740674 | Msa1011460:intron | 35.0% |
| !! | CACTATCGGTTTCACATTAT+CGG | + | chr7_1:15740966-15740985 | Msa1011460:intron | 35.0% |
| CAATAGCAATCTATGATGCA+CGG | - | chr7_1:15741027-15741046 | None:intergenic | 35.0% | |
| !! | GTAGTTGGATTGGTAAAGTT+TGG | + | chr7_1:15741284-15741303 | Msa1011460:intron | 35.0% |
| GCCAAAATAACTTGGCTTAA+AGG | + | chr7_1:15741325-15741344 | Msa1011460:intron | 35.0% | |
| TTGACAAGTAGTAGTACATC+AGG | + | chr7_1:15741518-15741537 | Msa1011460:intron | 35.0% | |
| TGACAAGTAGTAGTACATCA+GGG | + | chr7_1:15741519-15741538 | Msa1011460:intron | 35.0% | |
| TAAGGATAATCCACATACTC+TGG | + | chr7_1:15741603-15741622 | Msa1011460:intron | 35.0% | |
| GCAAATTGTTGCAGTAACAA+GGG | - | chr7_1:15741695-15741714 | None:intergenic | 35.0% | |
| AGCAAATTGTTGCAGTAACA+AGG | - | chr7_1:15741696-15741715 | None:intergenic | 35.0% | |
| TCATACACCAGATTGATATG+GGG | - | chr7_1:15742016-15742035 | None:intergenic | 35.0% | |
| GATCAATTTGGGAGATCAAA+AGG | + | chr7_1:15742363-15742382 | Msa1011460:CDS | 35.0% | |
| ACATTGCAAATTGAGCTTGT+TGG | + | chr7_1:15742468-15742487 | Msa1011460:CDS | 35.0% | |
| AACCAAATGATGTCTTTGCA+AGG | + | chr7_1:15742547-15742566 | Msa1011460:CDS | 35.0% | |
| !! | TATGAGCTCTGGAACAAATT+TGG | + | chr7_1:15742593-15742612 | Msa1011460:CDS | 35.0% |
| GACCAAATGATGTCTTTGTA+AGG | + | chr7_1:15742736-15742755 | Msa1011460:CDS | 35.0% | |
| CACCTTACAAAGACATCATT+TGG | - | chr7_1:15742741-15742760 | None:intergenic | 35.0% | |
| GAACAGAACTTGAGATTTCA+TGG | - | chr7_1:15742889-15742908 | None:intergenic | 35.0% | |
| AGGGAAGAAAGAAAATTTGG+AGG | + | chr7_1:15742984-15743003 | Msa1011460:intron | 35.0% | |
| AAAGAAAATTTGGAGGTAGC+AGG | + | chr7_1:15742991-15743010 | Msa1011460:CDS | 35.0% | |
| ! | AATAGCTTTACACCAACACA+TGG | + | chr7_1:15743020-15743039 | Msa1011460:CDS | 35.0% |
| GAAAGATCTTGATGAAGACT+TGG | + | chr7_1:15743106-15743125 | Msa1011460:CDS | 35.0% | |
| GAGGCTATAAAGGAAAACAA+AGG | + | chr7_1:15743143-15743162 | Msa1011460:CDS | 35.0% | |
| GGAAAACAAAGGAAAAGGAA+AGG | + | chr7_1:15743154-15743173 | Msa1011460:CDS | 35.0% | |
| ! | TTAGTTACCGAATTTGGTTC+GGG | + | chr7_1:15743388-15743407 | Msa1011460:three_prime_UTR | 35.0% |
| TGAGAGTGAGAAATGGAGTA+CGG | - | chr7_1:15739480-15739499 | None:intergenic | 40.0% | |
| AAGTACCTGAGAGTGAGAAA+TGG | - | chr7_1:15739487-15739506 | None:intergenic | 40.0% | |
| ACACAAACTACACACTGAGA+CGG | + | chr7_1:15739855-15739874 | Msa1011460:intron | 40.0% | |
| ! | ACGTCTTTCATCAGAAGTGT+CGG | + | chr7_1:15739929-15739948 | Msa1011460:intron | 40.0% |
| ATGTGTCAATGTCATGTTGG+TGG | - | chr7_1:15740095-15740114 | None:intergenic | 40.0% | |
| AGTCCTTGAGCTAAGTAACT+TGG | + | chr7_1:15740545-15740564 | Msa1011460:intron | 40.0% | |
| AAGCCAAGTTACTTAGCTCA+AGG | - | chr7_1:15740551-15740570 | None:intergenic | 40.0% | |
| AACGCCATAAAACCAAAGAC+TGG | - | chr7_1:15740662-15740681 | None:intergenic | 40.0% | |
| CTAGCTCATCATGTAAAACG+TGG | + | chr7_1:15740683-15740702 | Msa1011460:intron | 40.0% | |
| ! | CTTTTGTGAGCGTACACTAT+CGG | + | chr7_1:15740952-15740971 | Msa1011460:intron | 40.0% |
| CTAGCTCATCATGTAAAACG+TGG | + | chr7_1:15740683-15740702 | Msa1011460:intron | 40.0% | |
| ! | TGTTGATGCTTGCTACTGTT+TGG | + | chr7_1:15741939-15741958 | Msa1011460:intron | 40.0% |
| ATGTCAACCCCATATCAATC+TGG | + | chr7_1:15742006-15742025 | Msa1011460:intron | 40.0% | |
| !! | TAGGGGTGAATTTGGTGTTT+GGG | - | chr7_1:15742137-15742156 | None:intergenic | 40.0% |
| ATTAGTGGTAGGGGTGAATT+TGG | - | chr7_1:15742145-15742164 | None:intergenic | 40.0% | |
| TCAATTGGGCGTAACATTAG+TGG | - | chr7_1:15742160-15742179 | None:intergenic | 40.0% | |
| CAGCAGAAGTTGTCTTTACA+AGG | + | chr7_1:15742388-15742407 | Msa1011460:CDS | 40.0% | |
| ! | AGTAAGCTACTTTGTCCAAG+AGG | - | chr7_1:15742522-15742541 | None:intergenic | 40.0% |
| CTTGGACAAAGTAGCTTACT+AGG | + | chr7_1:15742522-15742541 | Msa1011460:CDS | 40.0% | |
| CACCTTGCAAAGACATCATT+TGG | - | chr7_1:15742552-15742571 | None:intergenic | 40.0% | |
| AGCCAAATGATGTCTTTGCA+AGG | + | chr7_1:15742661-15742680 | Msa1011460:CDS | 40.0% | |
| CACCTTGCAAAGACATCATT+TGG | - | chr7_1:15742552-15742571 | None:intergenic | 40.0% | |
| CATGAGCTATGGAACAAGTT+TGG | + | chr7_1:15742707-15742726 | Msa1011460:CDS | 40.0% | |
| AGCTAAGAGCTCATAAGATC+AGG | - | chr7_1:15742777-15742796 | None:intergenic | 40.0% | |
| TTCTGTTCATGTGTGTGTCA+TGG | + | chr7_1:15742901-15742920 | Msa1011460:intron | 40.0% | |
| TCATGTGTGTGTCATGGATA+AGG | + | chr7_1:15742907-15742926 | Msa1011460:intron | 40.0% | |
| GGTCATTCTTTCTTGGAAGA+TGG | - | chr7_1:15743046-15743065 | None:intergenic | 40.0% | |
| CGTGTATGGTCATTCTTTCT+TGG | - | chr7_1:15743053-15743072 | None:intergenic | 40.0% | |
| ATCTTGATGAAGACTTGGAG+AGG | + | chr7_1:15743111-15743130 | Msa1011460:CDS | 40.0% | |
| ! | GGGCGCTTAAAAGGTATATT+TGG | + | chr7_1:15743408-15743427 | Msa1011460:three_prime_UTR | 40.0% |
| TTTCGTCGAGTGACATGTCT+AGG | - | chr7_1:15739380-15739399 | None:intergenic | 45.0% | |
| GTACTCCATTTCTCACTCTC+AGG | + | chr7_1:15739479-15739498 | Msa1011460:CDS | 45.0% | |
| TTTGTGTCTGGTGTCTGTGT+TGG | - | chr7_1:15739842-15739861 | None:intergenic | 45.0% | |
| ! | CTCAGTGTGTAGTTTGTGTC+TGG | - | chr7_1:15739854-15739873 | None:intergenic | 45.0% |
| GCACAGACACTTCTGATTGA+AGG | + | chr7_1:15740043-15740062 | Msa1011460:intron | 45.0% | |
| ! | TGTCAATGTCATGTTGGTGG+CGG | - | chr7_1:15740092-15740111 | None:intergenic | 45.0% |
| GTCAATGTCCATGTCGTGTA+TGG | + | chr7_1:15740177-15740196 | Msa1011460:intron | 45.0% | |
| AGTAGTAGTACATCAGGGCA+TGG | + | chr7_1:15740755-15740774 | Msa1011460:intron | 45.0% | |
| GTCAATGTCCATGTCGTGTT+TGG | + | chr7_1:15740998-15741017 | Msa1011460:intron | 45.0% | |
| AGTGTACGCTCACAAAAGCT+TGG | - | chr7_1:15740950-15740969 | None:intergenic | 45.0% | |
| !! | GTAGGGGTGAATTTGGTGTT+TGG | - | chr7_1:15742138-15742157 | None:intergenic | 45.0% |
| TGGGCGTAACATTAGTGGTA+GGG | - | chr7_1:15742155-15742174 | None:intergenic | 45.0% | |
| TTGGGCGTAACATTAGTGGT+AGG | - | chr7_1:15742156-15742175 | None:intergenic | 45.0% | |
| !! | GTTCTGAAAAGAAAGGGGTG+AGG | - | chr7_1:15742210-15742229 | None:intergenic | 45.0% |
| TGTCTTTACAAGGCAGTCTG+AGG | + | chr7_1:15742398-15742417 | Msa1011460:CDS | 45.0% | |
| !! | TGAGCTTGTTGGAGCAAGTT+TGG | + | chr7_1:15742479-15742498 | Msa1011460:CDS | 45.0% |
| AGGTGCAAAATTCCAAGTCC+TGG | + | chr7_1:15742567-15742586 | Msa1011460:CDS | 45.0% | |
| AGTAAGCTACTTCGACCAAG+AGG | - | chr7_1:15742636-15742655 | None:intergenic | 45.0% | |
| TCTTGGTCGAAGTAGCTTAC+TGG | + | chr7_1:15742635-15742654 | Msa1011460:CDS | 45.0% | |
| CTTGGTCGAAGTAGCTTACT+GGG | + | chr7_1:15742636-15742655 | Msa1011460:CDS | 45.0% | |
| TAGCTCATGAAACCAGGAGT+CGG | - | chr7_1:15742696-15742715 | None:intergenic | 45.0% | |
| ACTCCTGGTTTCATGAGCTA+TGG | + | chr7_1:15742696-15742715 | Msa1011460:CDS | 45.0% | |
| GTTCCATAGCTCATGAAACC+AGG | - | chr7_1:15742702-15742721 | None:intergenic | 45.0% | |
| !! | GGCGTTTTGCTTTTCGTGTA+TGG | - | chr7_1:15743067-15743086 | None:intergenic | 45.0% |
| AGCAAAACGCCAGATTCCAA+CGG | + | chr7_1:15743076-15743095 | Msa1011460:CDS | 45.0% | |
| GTATCGCTCAGAGGCTATAA+AGG | + | chr7_1:15743133-15743152 | Msa1011460:CDS | 45.0% | |
| TTAAGCGCCCGAACCAAATT+CGG | - | chr7_1:15743398-15743417 | None:intergenic | 45.0% | |
| !! | ATTTGGTTCGGGCGCTTAAA+AGG | + | chr7_1:15743399-15743418 | Msa1011460:three_prime_UTR | 45.0% |
| GGAGAACGGGAGTAAGAGTA+GGG | - | chr7_1:15739340-15739359 | None:intergenic | 50.0% | |
| AGGAGAACGGGAGTAAGAGT+AGG | - | chr7_1:15739341-15739360 | None:intergenic | 50.0% | |
| !! | CTGGCATTTTGGAGGAGAAC+GGG | - | chr7_1:15739353-15739372 | None:intergenic | 50.0% |
| !! | GCTGGCATTTTGGAGGAGAA+CGG | - | chr7_1:15739354-15739373 | None:intergenic | 50.0% |
| TTCTCCTCCAAAATGCCAGC+CGG | + | chr7_1:15739354-15739373 | Msa1011460:exon | 50.0% | |
| !! | CAGAAGTGTCGGTGCTACAA+AGG | + | chr7_1:15739940-15739959 | Msa1011460:intron | 50.0% |
| ACTTACCTATTGCGCCGCTA+TGG | + | chr7_1:15740296-15740315 | Msa1011460:intron | 50.0% | |
| GCTCACAAAAGCTTGACAGC+AGG | - | chr7_1:15740943-15740962 | None:intergenic | 50.0% | |
| AGCATCTATAGCGGCACAGT+AGG | - | chr7_1:15741118-15741137 | None:intergenic | 50.0% | |
| AGTAGTAGTACATCAGGGCG+TGG | + | chr7_1:15741524-15741543 | Msa1011460:intron | 50.0% | |
| GGGCGTAACATTAGTGGTAG+GGG | - | chr7_1:15742154-15742173 | None:intergenic | 50.0% | |
| ACAGCTGTTGTTCTCGGAAG+AGG | + | chr7_1:15742311-15742330 | Msa1011460:intron | 50.0% | |
| CAGCTGTTGTTCTCGGAAGA+GGG | + | chr7_1:15742312-15742331 | Msa1011460:intron | 50.0% | |
| ! | AGGCTTTAGCAGCTCTCAAG+AGG | + | chr7_1:15742418-15742437 | Msa1011460:CDS | 50.0% |
| GAGCTCATAAGACCAGGACT+TGG | - | chr7_1:15742582-15742601 | None:intergenic | 50.0% | |
| !! | AGTCCTGGTCTTATGAGCTC+TGG | + | chr7_1:15742582-15742601 | Msa1011460:CDS | 50.0% |
| GTTCCAGAGCTCATAAGACC+AGG | - | chr7_1:15742588-15742607 | None:intergenic | 50.0% | |
| ACTCCTGCTGATATGCCTCT+TGG | + | chr7_1:15742618-15742637 | Msa1011460:CDS | 50.0% | |
| AGGTGTCAAATTCCGACTCC+TGG | + | chr7_1:15742681-15742700 | Msa1011460:CDS | 50.0% | |
| CTTGGAAGATGGCCATGTGT+TGG | - | chr7_1:15743035-15743054 | None:intergenic | 50.0% | |
| AGATCTTTCGCAGACACCGT+TGG | - | chr7_1:15743095-15743114 | None:intergenic | 50.0% | |
| GTCGAGTGACATGTCTAGGC+CGG | - | chr7_1:15739376-15739395 | None:intergenic | 55.0% | |
| TTGGTCTGTGGTTGGAGGTG+CGG | - | chr7_1:15739416-15739435 | None:intergenic | 55.0% | |
| CACGGACACCATACACGACA+TGG | - | chr7_1:15740188-15740207 | None:intergenic | 55.0% | |
| AGCATCCATAGCGGCGCAAT+AGG | - | chr7_1:15740304-15740323 | None:intergenic | 55.0% | |
| CACGGACACCAAACACGACA+TGG | - | chr7_1:15741009-15741028 | None:intergenic | 55.0% | |
| GCTCACAAAAGCTTGGCAGC+AGG | - | chr7_1:15741719-15741738 | None:intergenic | 55.0% | |
| GTTCTCGGAAGAGGGTGAGT+TGG | + | chr7_1:15742320-15742339 | Msa1011460:CDS | 55.0% | |
| ! | CGACCAAGAGGCATATCAGC+AGG | - | chr7_1:15742624-15742643 | None:intergenic | 55.0% |
| TCGCAGACACCGTTGGAATC+TGG | - | chr7_1:15743088-15743107 | None:intergenic | 55.0% | |
| !! | CTTGGAGAGGTATCGCTCAG+AGG | + | chr7_1:15743124-15743143 | Msa1011460:CDS | 55.0% |
| ! | TAGGCCGGCTGGCATTTTGG+AGG | - | chr7_1:15739361-15739380 | None:intergenic | 60.0% |
| ! | GTCTAGGCCGGCTGGCATTT+TGG | - | chr7_1:15739364-15739383 | None:intergenic | 60.0% |
| AGTGACATGTCTAGGCCGGC+TGG | - | chr7_1:15739372-15739391 | None:intergenic | 60.0% | |
| !! | GCGAGTTGGTCTGTGGTTGG+AGG | - | chr7_1:15739421-15739440 | None:intergenic | 60.0% |
| !! | GTGGCGAGTTGGTCTGTGGT+TGG | - | chr7_1:15739424-15739443 | None:intergenic | 60.0% |
| CACAGACCAACTCGCCACCT+CGG | + | chr7_1:15739426-15739445 | Msa1011460:CDS | 60.0% | |
| ! | TTGAGTTGCTGCGAACGCCG+AGG | - | chr7_1:15739446-15739465 | None:intergenic | 60.0% |
| ! | GTCTGTGGTTGGAGGTGCGG+CGG | - | chr7_1:15739413-15739432 | None:intergenic | 65.0% |
| !! | CGAGGTGGCGAGTTGGTCTG+TGG | - | chr7_1:15739428-15739447 | None:intergenic | 65.0% |
| AGTTGCTGCGAACGCCGAGG+TGG | - | chr7_1:15739443-15739462 | None:intergenic | 65.0% | |
| ACTCCTGCTGCTGCGCCTCT+TGG | + | chr7_1:15742504-15742523 | Msa1011460:CDS | 65.0% | |
| ! | TGTCCAAGAGGCGCAGCAGC+AGG | - | chr7_1:15742510-15742529 | None:intergenic | 65.0% |
| ! | GTTGGAGGTGCGGCGGTGAG+TGG | - | chr7_1:15739406-15739425 | None:intergenic | 70.0% |
| CGAACGCCGAGGTGGCGAGT+TGG | - | chr7_1:15739435-15739454 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 15739293 | 15743441 | 15739293 | ID=Msa1011460;Name=Msa1011460 |
| chr7_1 | mRNA | 15739293 | 15743441 | 15739293 | ID=Msa1011460-mRNA-1;Parent=Msa1011460;Name=Msa1011460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=73|1|1|1|1|1|4|251|308 |
| chr7_1 | exon | 15739293 | 15739500 | 15739293 | ID=Msa1011460-mRNA-1:exon:4060;Parent=Msa1011460-mRNA-1 |
| chr7_1 | exon | 15739587 | 15739730 | 15739587 | ID=Msa1011460-mRNA-1:exon:4061;Parent=Msa1011460-mRNA-1 |
| chr7_1 | exon | 15742315 | 15742757 | 15742315 | ID=Msa1011460-mRNA-1:exon:4062;Parent=Msa1011460-mRNA-1 |
| chr7_1 | exon | 15742986 | 15743441 | 15742986 | ID=Msa1011460-mRNA-1:exon:4063;Parent=Msa1011460-mRNA-1 |
| chr7_1 | five_prime_UTR | 15739293 | 15739365 | 15739293 | ID=Msa1011460-mRNA-1:five_prime_utr;Parent=Msa1011460-mRNA-1 |
| chr7_1 | CDS | 15739366 | 15739500 | 15739366 | ID=Msa1011460-mRNA-1:cds;Parent=Msa1011460-mRNA-1 |
| chr7_1 | CDS | 15739587 | 15739730 | 15739587 | ID=Msa1011460-mRNA-1:cds;Parent=Msa1011460-mRNA-1 |
| chr7_1 | CDS | 15742315 | 15742757 | 15742315 | ID=Msa1011460-mRNA-1:cds;Parent=Msa1011460-mRNA-1 |
| chr7_1 | CDS | 15742986 | 15743190 | 15742986 | ID=Msa1011460-mRNA-1:cds;Parent=Msa1011460-mRNA-1 |
| chr7_1 | three_prime_UTR | 15743191 | 15743441 | 15743191 | ID=Msa1011460-mRNA-1:three_prime_utr;Parent=Msa1011460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
