Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035380 | XP_013469313.1 | 91.456 | 515 | 38 | 1 | 1 | 509 | 1 | 515 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0035380 | 0.868273 | 7.380293e-66 | -8.615850e-47 |
| Msa0005020 | Msa0035380 | 0.811431 | 7.025927e-51 | -8.615850e-47 |
| Msa0014770 | Msa0035380 | 0.803361 | 3.616398e-49 | -8.615850e-47 |
| Msa0015570 | Msa0035380 | 0.820294 | 7.401474e-53 | -8.615850e-47 |
| Msa0016040 | Msa0035380 | 0.808377 | 3.191759e-50 | -8.615850e-47 |
| Msa0017670 | Msa0035380 | 0.805575 | 1.249118e-49 | -8.615850e-47 |
| Msa0019930 | Msa0035380 | 0.803573 | 3.268983e-49 | -8.615850e-47 |
| Msa0025160 | Msa0035380 | 0.850136 | 2.064311e-60 | -8.615850e-47 |
| Msa0025580 | Msa0035380 | 0.873245 | 1.706639e-67 | -8.615850e-47 |
| Msa0027280 | Msa0035380 | 0.821549 | 3.806718e-53 | -8.615850e-47 |
| Msa0032460 | Msa0035380 | 0.848950 | 4.421412e-60 | -8.615850e-47 |
| Msa0034210 | Msa0035380 | 0.801417 | 9.095499e-49 | -8.615850e-47 |
| Msa0035140 | Msa0035380 | 0.819579 | 1.078559e-52 | -8.615850e-47 |
| Msa0035270 | Msa0035380 | 0.937490 | 3.182560e-98 | -8.615850e-47 |
| Msa0035340 | Msa0035380 | 0.972920 | 1.467101e-135 | -8.615850e-47 |
| Msa0035380 | Msa0037740 | 0.803022 | 4.251048e-49 | -8.615850e-47 |
| Msa0035380 | Msa0042640 | 0.804599 | 1.999440e-49 | -8.615850e-47 |
| Msa0035380 | Msa0048510 | 0.811369 | 7.245233e-51 | -8.615850e-47 |
| Msa0035380 | Msa0050660 | 0.845492 | 3.927836e-59 | -8.615850e-47 |
| Msa0035380 | Msa0050700 | 0.846190 | 2.537424e-59 | -8.615850e-47 |
| Msa0035380 | Msa0050790 | 0.842425 | 2.605832e-58 | -8.615850e-47 |
| Msa0035380 | Msa0053070 | 0.822701 | 2.057801e-53 | -8.615850e-47 |
| Msa0035380 | Msa0056180 | 0.810537 | 1.097025e-50 | -8.615850e-47 |
| Msa0035380 | Msa0067060 | 0.824326 | 8.576625e-54 | -8.615850e-47 |
| Msa0035380 | Msa0067330 | 0.806438 | 8.225862e-50 | -8.615850e-47 |
| Msa0035380 | Msa0072520 | 0.824580 | 7.475423e-54 | -8.615850e-47 |
| Msa0035380 | Msa0073120 | 0.850281 | 1.878785e-60 | -8.615850e-47 |
| Msa0035380 | Msa0075530 | 0.826387 | 2.789098e-54 | -8.615850e-47 |
| Msa0035380 | Msa0077560 | 0.813734 | 2.202866e-51 | -8.615850e-47 |
| Msa0035380 | Msa0081980 | 0.816579 | 5.141986e-52 | -8.615850e-47 |
| Msa0035380 | Msa0090400 | 0.815225 | 1.030852e-51 | -8.615850e-47 |
| Msa0035380 | Msa0094790 | 0.815066 | 1.118034e-51 | -8.615850e-47 |
| Msa0035380 | Msa0098410 | 0.831763 | 1.387870e-55 | -8.615850e-47 |
| Msa0035380 | Msa0113340 | 0.802268 | 6.082529e-49 | -8.615850e-47 |
| Msa0035380 | Msa0115550 | 0.802177 | 6.350183e-49 | -8.615850e-47 |
| Msa0035380 | Msa0121330 | 0.870611 | 1.280522e-66 | -8.615850e-47 |
| Msa0035380 | Msa0123070 | 0.826364 | 2.824634e-54 | -8.615850e-47 |
| Msa0035380 | Msa0126210 | 0.812963 | 3.254828e-51 | -8.615850e-47 |
| Msa0035380 | Msa0128310 | 0.803044 | 4.206460e-49 | -8.615850e-47 |
| Msa0035380 | Msa0129380 | 0.853698 | 2.011332e-61 | -8.615850e-47 |
| Msa0035380 | Msa0137880 | 0.813109 | 3.023047e-51 | -8.615850e-47 |
| Msa0035380 | Msa0140130 | 0.812148 | 4.903937e-51 | -8.615850e-47 |
| Msa0035380 | Msa0140280 | 0.845432 | 4.076739e-59 | -8.615850e-47 |
| Msa0035380 | Msa0140380 | 0.800430 | 1.446931e-48 | -8.615850e-47 |
| Msa0035380 | Msa0141640 | 0.823608 | 1.264082e-53 | -8.615850e-47 |
| Msa0035380 | Msa0146650 | 0.864141 | 1.505603e-64 | -8.615850e-47 |
| Msa0035380 | Msa0149350 | 0.814633 | 1.395049e-51 | -8.615850e-47 |
| Msa0035380 | Msa0154620 | 0.834446 | 2.983087e-56 | -8.615850e-47 |
| Msa0035380 | Msa0156050 | 0.815063 | 1.120086e-51 | -8.615850e-47 |
| Msa0035380 | Msa0156090 | 0.808653 | 2.786056e-50 | -8.615850e-47 |
| Msa0035380 | Msa0161930 | 0.816910 | 4.334208e-52 | -8.615850e-47 |
| Msa0035380 | Msa0166170 | 0.827839 | 1.253316e-54 | -8.615850e-47 |
| Msa0035380 | Msa0168050 | 0.807133 | 5.865620e-50 | -8.615850e-47 |
| Msa0035380 | Msa0173290 | 0.824626 | 7.290695e-54 | -8.615850e-47 |
| Msa0035380 | Msa0174290 | 0.830892 | 2.273497e-55 | -8.615850e-47 |
| Msa0035380 | Msa0174440 | 0.807599 | 4.671613e-50 | -8.615850e-47 |
| Msa0035380 | Msa0174650 | 0.803382 | 3.580849e-49 | -8.615850e-47 |
| Msa0035380 | Msa0176060 | 0.933566 | 1.542519e-95 | -8.615850e-47 |
| Msa0035380 | Msa0185960 | 0.813086 | 3.058585e-51 | -8.615850e-47 |
| Msa0035380 | Msa0188610 | 0.808629 | 2.819423e-50 | -8.615850e-47 |
| Msa0035380 | Msa0190570 | 0.808369 | 3.203957e-50 | -8.615850e-47 |
| Msa0035380 | Msa0200050 | 0.832331 | 1.004788e-55 | -8.615850e-47 |
| Msa0035380 | Msa0209980 | 0.806185 | 9.302444e-50 | -8.615850e-47 |
| Msa0035380 | Msa0213610 | 0.803935 | 2.748826e-49 | -8.615850e-47 |
| Msa0035380 | Msa0218020 | 0.815077 | 1.112211e-51 | -8.615850e-47 |
| Msa0035380 | Msa0230800 | 0.816016 | 6.872413e-52 | -8.615850e-47 |
| Msa0035380 | Msa0230870 | 0.815395 | 9.448357e-52 | -8.615850e-47 |
| Msa0035380 | Msa0233020 | 0.800280 | 1.552198e-48 | -8.615850e-47 |
| Msa0035380 | Msa0270340 | 0.829856 | 4.073637e-55 | -8.615850e-47 |
| Msa0035380 | Msa0284800 | 0.808521 | 2.973773e-50 | -8.615850e-47 |
| Msa0035380 | Msa0293040 | 0.806585 | 7.657953e-50 | -8.615850e-47 |
| Msa0035380 | Msa0298470 | 0.810045 | 1.401052e-50 | -8.615850e-47 |
| Msa0035380 | Msa0307670 | 0.811951 | 5.413247e-51 | -8.615850e-47 |
| Msa0035380 | Msa0330520 | 0.814537 | 1.464869e-51 | -8.615850e-47 |
| Msa0035380 | Msa0334660 | 0.806320 | 8.711331e-50 | -8.615850e-47 |
| Msa0035380 | Msa0347530 | 0.822401 | 2.415643e-53 | -8.615850e-47 |
| Msa0035380 | Msa0367520 | 0.840795 | 7.012699e-58 | -8.615850e-47 |
| Msa0035380 | Msa0367690 | 0.818859 | 1.572951e-52 | -8.615850e-47 |
| Msa0035380 | Msa0380670 | 0.852745 | 3.772988e-61 | -8.615850e-47 |
| Msa0035380 | Msa0381730 | 0.836135 | 1.117097e-56 | -8.615850e-47 |
| Msa0035380 | Msa0382390 | 0.807745 | 4.351173e-50 | -8.615850e-47 |
| Msa0035380 | Msa0382770 | 0.813559 | 2.407464e-51 | -8.615850e-47 |
| Msa0035380 | Msa0383000 | 0.801026 | 1.093514e-48 | -8.615850e-47 |
| Msa0035380 | Msa0389950 | 0.821672 | 3.564358e-53 | -8.615850e-47 |
| Msa0035380 | Msa0415450 | 0.814890 | 1.223547e-51 | -8.615850e-47 |
| Msa0035380 | Msa0415600 | 0.803464 | 3.443780e-49 | -8.615850e-47 |
| Msa0035380 | Msa0422050 | 0.840561 | 8.074759e-58 | -8.615850e-47 |
| Msa0035380 | Msa0426530 | 0.806101 | 9.688876e-50 | -8.615850e-47 |
| Msa0035380 | Msa0430300 | 0.843968 | 1.010739e-58 | -8.615850e-47 |
| Msa0035380 | Msa0430480 | 0.810600 | 1.063476e-50 | -8.615850e-47 |
| Msa0035380 | Msa0431200 | 0.847456 | 1.143327e-59 | -8.615850e-47 |
| Msa0035380 | Msa0432010 | 0.822420 | 2.392131e-53 | -8.615850e-47 |
| Msa0035380 | Msa0447750 | 0.809032 | 2.311533e-50 | -8.615850e-47 |
| Msa0035380 | Msa0457570 | 0.817763 | 2.785444e-52 | -8.615850e-47 |
| Msa0035380 | Msa0460070 | 0.801517 | 8.672884e-49 | -8.615850e-47 |
| Msa0035380 | Msa0466880 | 0.807034 | 6.155490e-50 | -8.615850e-47 |
| Msa0035380 | Msa0468700 | 0.825154 | 5.471669e-54 | -8.615850e-47 |
| Msa0035380 | Msa0476280 | 0.831739 | 1.406917e-55 | -8.615850e-47 |
| Msa0035380 | Msa0479320 | 0.802211 | 6.248600e-49 | -8.615850e-47 |
| Msa0035380 | Msa0481890 | 0.810451 | 1.145023e-50 | -8.615850e-47 |
| Msa0035380 | Msa0484570 | 0.812723 | 3.673428e-51 | -8.615850e-47 |
| Msa0035380 | Msa0495550 | 0.804839 | 1.781765e-49 | -8.615850e-47 |
| Msa0035380 | Msa0504720 | 0.817587 | 3.052452e-52 | -8.615850e-47 |
| Msa0035380 | Msa0514580 | 0.825095 | 5.648715e-54 | -8.615850e-47 |
| Msa0035380 | Msa0517250 | 0.823962 | 1.044368e-53 | -8.615850e-47 |
| Msa0035380 | Msa0520260 | 0.847944 | 8.392533e-60 | -8.615850e-47 |
| Msa0035380 | Msa0520870 | 0.821932 | 3.103250e-53 | -8.615850e-47 |
| Msa0035380 | Msa0520990 | 0.802111 | 6.549373e-49 | -8.615850e-47 |
| Msa0035380 | Msa0525000 | 0.800171 | 1.633248e-48 | -8.615850e-47 |
| Msa0035380 | Msa0529030 | 0.803636 | 3.171402e-49 | -8.615850e-47 |
| Msa0035380 | Msa0530780 | 0.824067 | 9.865645e-54 | -8.615850e-47 |
| Msa0035380 | Msa0531960 | 0.839883 | 1.213485e-57 | -8.615850e-47 |
| Msa0035380 | Msa0532050 | 0.837796 | 4.208325e-57 | -8.615850e-47 |
| Msa0035380 | Msa0541300 | 0.802018 | 6.846163e-49 | -8.615850e-47 |
| Msa0035380 | Msa0550590 | 0.828571 | 8.350358e-55 | -8.615850e-47 |
| Msa0035380 | Msa0561560 | 0.803262 | 3.791890e-49 | -8.615850e-47 |
| Msa0035380 | Msa0563940 | 0.830700 | 2.533728e-55 | -8.615850e-47 |
| Msa0035380 | Msa0567170 | 0.832281 | 1.033665e-55 | -8.615850e-47 |
| Msa0035380 | Msa0570010 | 0.854896 | 9.066825e-62 | -8.615850e-47 |
| Msa0035380 | Msa0571620 | 0.807828 | 4.176763e-50 | -8.615850e-47 |
| Msa0035380 | Msa0580200 | 0.827541 | 1.477997e-54 | -8.615850e-47 |
| Msa0035380 | Msa0580370 | 0.808760 | 2.643239e-50 | -8.615850e-47 |
| Msa0035380 | Msa0580810 | 0.801397 | 9.179207e-49 | -8.615850e-47 |
| Msa0035380 | Msa0585340 | 0.808425 | 3.116601e-50 | -8.615850e-47 |
| Msa0035380 | Msa0588920 | 0.802805 | 4.712024e-49 | -8.615850e-47 |
| Msa0035380 | Msa0590200 | 0.826374 | 2.810093e-54 | -8.615850e-47 |
| Msa0035380 | Msa0591170 | 0.801888 | 7.278946e-49 | -8.615850e-47 |
| Msa0035380 | Msa0606100 | 0.827607 | 1.425196e-54 | -8.615850e-47 |
| Msa0035380 | Msa0606580 | 0.817867 | 2.638796e-52 | -8.615850e-47 |
| Msa0035380 | Msa0607800 | 0.829976 | 3.806752e-55 | -8.615850e-47 |
| Msa0035380 | Msa0609650 | 0.801603 | 8.328958e-49 | -8.615850e-47 |
| Msa0035380 | Msa0619710 | 0.876272 | 1.593113e-68 | -8.615850e-47 |
| Msa0035380 | Msa0620500 | 0.802654 | 5.064422e-49 | -8.615850e-47 |
| Msa0035380 | Msa0621710 | 0.836505 | 8.995024e-57 | -8.615850e-47 |
| Msa0035380 | Msa0625340 | 0.808858 | 2.519117e-50 | -8.615850e-47 |
| Msa0035380 | Msa0625620 | 0.825346 | 4.927416e-54 | -8.615850e-47 |
| Msa0035380 | Msa0630660 | 0.811772 | 5.921754e-51 | -8.615850e-47 |
| Msa0035380 | Msa0647050 | 0.817756 | 2.796039e-52 | -8.615850e-47 |
| Msa0035380 | Msa0647280 | 0.814910 | 1.211012e-51 | -8.615850e-47 |
| Msa0035380 | Msa0648040 | 0.819106 | 1.382519e-52 | -8.615850e-47 |
| Msa0035380 | Msa0657700 | 0.832439 | 9.445888e-56 | -8.615850e-47 |
| Msa0035380 | Msa0658640 | 0.822658 | 2.105977e-53 | -8.615850e-47 |
| Msa0035380 | Msa0661150 | 0.802210 | 6.251502e-49 | -8.615850e-47 |
| Msa0035380 | Msa0666700 | 0.844833 | 5.915941e-59 | -8.615850e-47 |
| Msa0035380 | Msa0668900 | 0.847947 | 8.375459e-60 | -8.615850e-47 |
| Msa0035380 | Msa0686800 | 0.804671 | 1.931339e-49 | -8.615850e-47 |
| Msa0035380 | Msa0687090 | 0.856375 | 3.356836e-62 | -8.615850e-47 |
| Msa0035380 | Msa0690740 | 0.821847 | 3.247593e-53 | -8.615850e-47 |
| Msa0035380 | Msa0698730 | 0.823488 | 1.348075e-53 | -8.615850e-47 |
| Msa0035380 | Msa0700460 | 0.832087 | 1.154384e-55 | -8.615850e-47 |
| Msa0035380 | Msa0702810 | 0.818706 | 1.704215e-52 | -8.615850e-47 |
| Msa0035380 | Msa0703600 | 0.819534 | 1.104196e-52 | -8.615850e-47 |
| Msa0035380 | Msa0706150 | 0.860716 | 1.700859e-63 | -8.615850e-47 |
| Msa0035380 | Msa0709200 | 0.820971 | 5.173252e-53 | -8.615850e-47 |
| Msa0035380 | Msa0709440 | 0.814459 | 1.524285e-51 | -8.615850e-47 |
| Msa0035380 | Msa0711010 | 0.813205 | 2.880206e-51 | -8.615850e-47 |
| Msa0035380 | Msa0716480 | 0.814112 | 1.818364e-51 | -8.615850e-47 |
| Msa0035380 | Msa0720410 | 0.800559 | 1.361481e-48 | -8.615850e-47 |
| Msa0035380 | Msa0735780 | 0.833448 | 5.302967e-56 | -8.615850e-47 |
| Msa0035380 | Msa0736890 | 0.829278 | 5.628148e-55 | -8.615850e-47 |
| Msa0035380 | Msa0740710 | 0.844512 | 7.221551e-59 | -8.615850e-47 |
| Msa0035380 | Msa0747000 | 0.940887 | 1.079950e-100 | -8.615850e-47 |
| Msa0035380 | Msa0747740 | 0.833219 | 6.045923e-56 | -8.615850e-47 |
| Msa0035380 | Msa0756490 | 0.823883 | 1.089927e-53 | -8.615850e-47 |
| Msa0035380 | Msa0756820 | 0.801898 | 7.246110e-49 | -8.615850e-47 |
| Msa0035380 | Msa0773630 | 0.826325 | 2.886953e-54 | -8.615850e-47 |
| Msa0035380 | Msa0778550 | 0.823418 | 1.399879e-53 | -8.615850e-47 |
| Msa0035380 | Msa0780910 | 0.846074 | 2.728901e-59 | -8.615850e-47 |
| Msa0035380 | Msa0792370 | 0.817055 | 4.020153e-52 | -8.615850e-47 |
| Msa0035380 | Msa0795870 | 0.805615 | 1.225403e-49 | -8.615850e-47 |
| Msa0035380 | Msa0811020 | 0.802589 | 5.221034e-49 | -8.615850e-47 |
| Msa0035380 | Msa0815920 | 0.823082 | 1.677469e-53 | -8.615850e-47 |
| Msa0035380 | Msa0815970 | 0.801580 | 8.421157e-49 | -8.615850e-47 |
| Msa0035380 | Msa0818880 | 0.805217 | 1.484976e-49 | -8.615850e-47 |
| Msa0035380 | Msa0821160 | 0.835628 | 1.502653e-56 | -8.615850e-47 |
| Msa0035380 | Msa0824450 | 0.807230 | 5.594436e-50 | -8.615850e-47 |
| Msa0035380 | Msa0828970 | 0.817307 | 3.529821e-52 | -8.615850e-47 |
| Msa0035380 | Msa0833650 | 0.811143 | 8.112512e-51 | -8.615850e-47 |
| Msa0035380 | Msa0837460 | 0.812552 | 4.002405e-51 | -8.615850e-47 |
| Msa0035380 | Msa0863620 | 0.806687 | 7.288838e-50 | -8.615850e-47 |
| Msa0035380 | Msa0894790 | 0.804546 | 2.051275e-49 | -8.615850e-47 |
| Msa0035380 | Msa0900760 | 0.801873 | 7.333023e-49 | -8.615850e-47 |
| Msa0035380 | Msa0909760 | 0.847356 | 1.218158e-59 | -8.615850e-47 |
| Msa0035380 | Msa0915520 | 0.819133 | 1.362876e-52 | -8.615850e-47 |
| Msa0035380 | Msa0921590 | 0.818152 | 2.275735e-52 | -8.615850e-47 |
| Msa0035380 | Msa0931590 | 0.813529 | 2.444669e-51 | -8.615850e-47 |
| Msa0035380 | Msa0956350 | 0.803393 | 3.561269e-49 | -8.615850e-47 |
| Msa0035380 | Msa0966320 | 0.809120 | 2.213352e-50 | -8.615850e-47 |
| Msa0035380 | Msa1002640 | 0.802445 | 5.591743e-49 | -8.615850e-47 |
| Msa0035380 | Msa1009950 | 0.811252 | 7.683313e-51 | -8.615850e-47 |
| Msa0035380 | Msa1011460 | 0.819101 | 1.386050e-52 | -8.615850e-47 |
| Msa0035380 | Msa1021590 | 0.827948 | 1.179745e-54 | -8.615850e-47 |
| Msa0035380 | Msa1025560 | 0.805977 | 1.028687e-49 | -8.615850e-47 |
| Msa0035380 | Msa1029530 | 0.814909 | 1.211633e-51 | -8.615850e-47 |
| Msa0035380 | Msa1034600 | 0.846662 | 1.886925e-59 | -8.615850e-47 |
| Msa0035380 | Msa1035570 | 0.802448 | 5.583047e-49 | -8.615850e-47 |
| Msa0035380 | Msa1035610 | 0.819117 | 1.374591e-52 | -8.615850e-47 |
| Msa0035380 | Msa1042160 | 0.851298 | 9.718533e-61 | -8.615850e-47 |
| Msa0035380 | Msa1042190 | 0.855236 | 7.221600e-62 | -8.615850e-47 |
| Msa0035380 | Msa1042880 | 0.805347 | 1.394944e-49 | -8.615850e-47 |
| Msa0035380 | Msa1044680 | 0.822468 | 2.330882e-53 | -8.615850e-47 |
| Msa0035380 | Msa1059020 | 0.819808 | 9.562478e-53 | -8.615850e-47 |
| Msa0035380 | Msa1064370 | 0.821807 | 3.318111e-53 | -8.615850e-47 |
| Msa0035380 | Msa1074370 | 0.813855 | 2.072193e-51 | -8.615850e-47 |
| Msa0035380 | Msa1076820 | 0.821618 | 3.668109e-53 | -8.615850e-47 |
| Msa0035380 | Msa1077990 | 0.800885 | 1.168193e-48 | -8.615850e-47 |
| Msa0035380 | Msa1078820 | 0.837705 | 4.440285e-57 | -8.615850e-47 |
| Msa0035380 | Msa1078880 | 0.852257 | 5.198625e-61 | -8.615850e-47 |
| Msa0035380 | Msa1078970 | 0.855834 | 4.834705e-62 | -8.615850e-47 |
| Msa0035380 | Msa1080000 | 0.830764 | 2.443623e-55 | -8.615850e-47 |
| Msa0035380 | Msa1081390 | 0.824118 | 9.595129e-54 | -8.615850e-47 |
| Msa0035380 | Msa1081690 | 0.831255 | 1.851596e-55 | -8.615850e-47 |
| Msa0035380 | Msa1082200 | 0.805398 | 1.360884e-49 | -8.615850e-47 |
| Msa0035380 | Msa1082380 | 0.815007 | 1.152411e-51 | -8.615850e-47 |
| Msa0035380 | Msa1084530 | 0.813389 | 2.624320e-51 | -8.615850e-47 |
| Msa0035380 | Msa1090140 | 0.839831 | 1.252120e-57 | -8.615850e-47 |
| Msa0035380 | Msa1105640 | 0.828107 | 1.080289e-54 | -8.615850e-47 |
| Msa0035380 | Msa1116220 | 0.836848 | 7.357273e-57 | -8.615850e-47 |
| Msa0035380 | Msa1116660 | 0.821829 | 3.278636e-53 | -8.615850e-47 |
| Msa0035380 | Msa1123970 | 0.839814 | 1.265401e-57 | -8.615850e-47 |
| Msa0035380 | Msa1125820 | 0.820884 | 5.418333e-53 | -8.615850e-47 |
| Msa0035380 | Msa1125990 | 0.822831 | 1.919173e-53 | -8.615850e-47 |
| Msa0035380 | Msa1127280 | 0.808221 | 3.445801e-50 | -8.615850e-47 |
| Msa0035380 | Msa1132530 | 0.826945 | 2.052526e-54 | -8.615850e-47 |
| Msa0035380 | Msa1132840 | 0.807669 | 4.514732e-50 | -8.615850e-47 |
| Msa0035380 | Msa1139050 | 0.806623 | 7.519016e-50 | -8.615850e-47 |
| Msa0035380 | Msa1148960 | 0.812711 | 3.694531e-51 | -8.615850e-47 |
| Msa0035380 | Msa1154100 | 0.803984 | 2.684733e-49 | -8.615850e-47 |
| Msa0035380 | Msa1162880 | 0.804441 | 2.156988e-49 | -8.615850e-47 |
| Msa0035380 | Msa1164190 | 0.813175 | 2.923852e-51 | -8.615850e-47 |
| Msa0035380 | Msa1165480 | 0.809960 | 1.461408e-50 | -8.615850e-47 |
| Msa0035380 | Msa1166190 | 0.823356 | 1.447837e-53 | -8.615850e-47 |
| Msa0035380 | Msa1166290 | 0.808280 | 3.347587e-50 | -8.615850e-47 |
| Msa0035380 | Msa1167470 | 0.855778 | 5.022153e-62 | -8.615850e-47 |
| Msa0035380 | Msa1169190 | 0.850607 | 1.521723e-60 | -8.615850e-47 |
| Msa0035380 | Msa1169650 | 0.840819 | 6.910148e-58 | -8.615850e-47 |
| Msa0035380 | Msa1171290 | 0.805861 | 1.088316e-49 | -8.615850e-47 |
| Msa0035380 | Msa1171780 | 0.813265 | 2.793448e-51 | -8.615850e-47 |
| Msa0035380 | Msa1190390 | 0.803789 | 2.948506e-49 | -8.615850e-47 |
| Msa0035380 | Msa1192560 | 0.804869 | 1.755906e-49 | -8.615850e-47 |
| Msa0035380 | Msa1192590 | 0.803672 | 3.118009e-49 | -8.615850e-47 |
| Msa0035380 | Msa1214350 | 0.825488 | 4.561668e-54 | -8.615850e-47 |
| Msa0035380 | Msa1215870 | 0.816419 | 5.585389e-52 | -8.615850e-47 |
| Msa0035380 | Msa1215980 | 0.803836 | 2.882181e-49 | -8.615850e-47 |
| Msa0035380 | Msa1216090 | 0.801289 | 9.659351e-49 | -8.615850e-47 |
| Msa0035380 | Msa1216110 | 0.810875 | 9.273656e-51 | -8.615850e-47 |
| Msa0035380 | Msa1216340 | 0.804981 | 1.663720e-49 | -8.615850e-47 |
| Msa0035380 | Msa1218820 | 0.817912 | 2.577566e-52 | -8.615850e-47 |
| Msa0035380 | Msa1221120 | 0.806699 | 7.245084e-50 | -8.615850e-47 |
| Msa0035380 | Msa1226520 | 0.823653 | 1.233597e-53 | -8.615850e-47 |
| Msa0035380 | Msa1228580 | 0.800105 | 1.684678e-48 | -8.615850e-47 |
| Msa0035380 | Msa1228630 | 0.801715 | 7.899104e-49 | -8.615850e-47 |
| Msa0035380 | Msa1240770 | 0.851713 | 7.420301e-61 | -8.615850e-47 |
| Msa0035380 | Msa1244240 | 0.833507 | 5.124424e-56 | -8.615850e-47 |
| Msa0035380 | Msa1254540 | 0.831567 | 1.551734e-55 | -8.615850e-47 |
| Msa0035380 | Msa1260710 | 0.813713 | 2.226500e-51 | -8.615850e-47 |
| Msa0035380 | Msa1262590 | 0.822900 | 1.849731e-53 | -8.615850e-47 |
| Msa0035380 | Msa1263740 | 0.802097 | 6.595284e-49 | -8.615850e-47 |
| Msa0035380 | Msa1263780 | 0.832736 | 7.973144e-56 | -8.615850e-47 |
| Msa0035380 | Msa1265450 | 0.804356 | 2.246835e-49 | -8.615850e-47 |
| Msa0035380 | Msa1276830 | 0.808924 | 2.438387e-50 | -8.615850e-47 |
| Msa0035380 | Msa1282260 | 0.837575 | 4.794243e-57 | -8.615850e-47 |
| Msa0035380 | Msa1298220 | 0.800456 | 1.429048e-48 | -8.615850e-47 |
| Msa0035380 | Msa1300460 | 0.817433 | 3.306662e-52 | -8.615850e-47 |
| Msa0035380 | Msa1306340 | 0.809180 | 2.149363e-50 | -8.615850e-47 |
| Msa0035380 | Msa1306570 | 0.822074 | 2.877813e-53 | -8.615850e-47 |
| Msa0035380 | Msa1308850 | 0.800103 | 1.685892e-48 | -8.615850e-47 |
| Msa0035380 | Msa1315160 | 0.812268 | 4.617611e-51 | -8.615850e-47 |
| Msa0035380 | Msa1321340 | 0.833728 | 4.514242e-56 | -8.615850e-47 |
| Msa0035380 | Msa1321530 | 0.804494 | 2.102626e-49 | -8.615850e-47 |
| Msa0035380 | Msa1332950 | 0.808538 | 2.949065e-50 | -8.615850e-47 |
| Msa0035380 | Msa1342810 | 0.819724 | 9.995852e-53 | -8.615850e-47 |
| Msa0035380 | Msa1343180 | 0.829739 | 4.348028e-55 | -8.615850e-47 |
| Msa0035380 | Msa1349690 | 0.805093 | 1.576215e-49 | -8.615850e-47 |
| Msa0035380 | Msa1358290 | 0.817171 | 3.786060e-52 | -8.615850e-47 |
| Msa0035380 | Msa1359690 | 0.801853 | 7.402457e-49 | -8.615850e-47 |
| Msa0035380 | Msa1359980 | 0.809088 | 2.248568e-50 | -8.615850e-47 |
| Msa0035380 | Msa1364410 | 0.811922 | 5.492740e-51 | -8.615850e-47 |
| Msa0035380 | Msa1368750 | 0.819025 | 1.442575e-52 | -8.615850e-47 |
| Msa0035380 | Msa1374790 | 0.828859 | 7.110849e-55 | -8.615850e-47 |
| Msa0035380 | Msa1375350 | 0.831362 | 1.742898e-55 | -8.615850e-47 |
| Msa0035380 | Msa1383310 | 0.842319 | 2.781411e-58 | -8.615850e-47 |
| Msa0035380 | Msa1392740 | 0.801472 | 8.860605e-49 | -8.615850e-47 |
| Msa0035380 | Msa1393780 | 0.808381 | 3.185388e-50 | -8.615850e-47 |
| Msa0035380 | Msa1405460 | 0.800206 | 1.606639e-48 | -8.615850e-47 |
| Msa0035380 | Msa1406720 | 0.802037 | 6.782908e-49 | -8.615850e-47 |
| Msa0035380 | Msa1407840 | 0.804405 | 2.194461e-49 | -8.615850e-47 |
| Msa0035380 | Msa1409410 | 0.855281 | 7.010890e-62 | -8.615850e-47 |
| Msa0035380 | Msa1410160 | 0.812788 | 3.553893e-51 | -8.615850e-47 |
| Msa0035380 | Msa1413940 | 0.805426 | 1.342897e-49 | -8.615850e-47 |
| Msa0035380 | Msa1414170 | 0.835006 | 2.156989e-56 | -8.615850e-47 |
| Msa0035380 | Msa1417370 | 0.814903 | 1.215620e-51 | -8.615850e-47 |
| Msa0035380 | Msa1426110 | 0.841540 | 4.466968e-58 | -8.615850e-47 |
| Msa0035380 | Msa1431480 | 0.802212 | 6.244869e-49 | -8.615850e-47 |
| Msa0035380 | Msa1437810 | 0.806665 | 7.365978e-50 | -8.615850e-47 |
| Msa0035380 | Msa1440630 | 0.842445 | 2.574189e-58 | -8.615850e-47 |
| Msa0035380 | Msa1447170 | 0.810653 | 1.035797e-50 | -8.615850e-47 |
| Msa0035380 | Msa1450190 | 0.807903 | 4.027083e-50 | -8.615850e-47 |
| Msa0035380 | Msa1451820 | 0.826877 | 2.130808e-54 | -8.615850e-47 |
| Msa0035380 | Msa1452140 | 0.804713 | 1.893108e-49 | -8.615850e-47 |
| Msa0035380 | Msa1462490 | 0.840074 | 1.082477e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035380 | MtrunA17_Chr1g0197601 | 91.456 | 515 | 38 | 1 | 1 | 509 | 1 | 515 | 0.0 | 947 |
| Msa0035380 | MtrunA17_Chr6g0478171 | 50.769 | 65 | 32 | 0 | 21 | 85 | 56 | 120 | 3.66e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035380 | AT3G52170.3 | 54.400 | 125 | 55 | 1 | 2 | 126 | 1 | 123 | 1.38e-30 | 124 |
| Msa0035380 | AT3G52170.4 | 54.400 | 125 | 55 | 1 | 2 | 126 | 1 | 123 | 1.38e-30 | 124 |
| Msa0035380 | AT5G58210.1 | 51.786 | 56 | 23 | 1 | 30 | 85 | 48 | 99 | 4.73e-12 | 68.2 |
| Msa0035380 | AT5G58210.4 | 51.786 | 56 | 23 | 1 | 30 | 85 | 48 | 99 | 4.73e-12 | 68.2 |
| Msa0035380 | AT5G58210.2 | 51.786 | 56 | 23 | 1 | 30 | 85 | 48 | 99 | 4.73e-12 | 68.2 |
| Msa0035380 | AT5G58210.3 | 51.786 | 56 | 23 | 1 | 30 | 85 | 48 | 99 | 4.73e-12 | 68.2 |
Find 132 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAGCGAGGGTTTGGATTT+TGG | 0.126338 | 1_1:-63549286 | Msa0035380:five_prime_UTR |
| CGCAGATAATTCTAATTTAC+TGG | 0.215505 | 1_1:-63546864 | Msa0035380:CDS |
| CCTTGTTAGTCAAATCTAAA+TGG | 0.252894 | 1_1:+63547506 | None:intergenic |
| CAGTTGTGTTGATTCTTCTC+TGG | 0.258782 | 1_1:+63546290 | None:intergenic |
| CTCTTGTTCGACATTCAGTT+TGG | 0.300579 | 1_1:+63547096 | None:intergenic |
| GACAATGGGCATGTCGTAAA+TGG | 0.303801 | 1_1:-63547421 | Msa0035380:CDS |
| CTTCTTTATATCCTTCTCTA+AGG | 0.313422 | 1_1:+63546934 | None:intergenic |
| TCTGGAACTTTCTTGAGTTC+AGG | 0.316178 | 1_1:+63547619 | None:intergenic |
| GTTTCTGATGGGCATTATAC+TGG | 0.323187 | 1_1:-63547352 | Msa0035380:CDS |
| TCCTGCTAAATTCAACTTGC+AGG | 0.334858 | 1_1:-63547737 | Msa0035380:CDS |
| AAAGCCATTGTCAATGCCTT+TGG | 0.335893 | 1_1:-63546065 | Msa0035380:CDS |
| CGAGTAGCGTAGCGAGGGTT+TGG | 0.350834 | 1_1:-63549293 | Msa0035380:five_prime_UTR |
| ATGATGCATTCTGTTGTAAA+AGG | 0.367939 | 1_1:-63548861 | Msa0035380:CDS |
| ATGCACTGACTTGTTCTTTG+TGG | 0.392523 | 1_1:+63546753 | None:intergenic |
| AGTTGTGTTGATTCTTCTCT+GGG | 0.392668 | 1_1:+63546291 | None:intergenic |
| TTATGTGTAAGAGTAATTGA+TGG | 0.394119 | 1_1:+63547832 | None:intergenic |
| GCTGATAAATATAGGCTTGA+TGG | 0.400710 | 1_1:-63546331 | Msa0035380:CDS |
| AGCAGTGGGTCATTTGTATC+TGG | 0.405639 | 1_1:+63547601 | None:intergenic |
| TGCACTGACTTGTTCTTTGT+GGG | 0.406260 | 1_1:+63546754 | None:intergenic |
| CCTTGTTTGTCATGTCTACC+TGG | 0.406365 | 1_1:+63547284 | None:intergenic |
| AAGCCATTGTCAATGCCTTT+GGG | 0.408921 | 1_1:-63546064 | Msa0035380:CDS |
| CAAGGAATCTGTTGAAGCTT+CGG | 0.412916 | 1_1:-63547266 | Msa0035380:CDS |
| GGTTTACTTACCTGCATCTC+AGG | 0.415129 | 1_1:+63547127 | None:intergenic |
| CAATAGAGCGAAAAGAGGAT+TGG | 0.415556 | 1_1:+63546088 | None:intergenic |
| CTCAGGTATAGTAGCTTCAA+TGG | 0.415944 | 1_1:+63547144 | None:intergenic |
| TCTTGTTCGACATTCAGTTT+GGG | 0.422344 | 1_1:+63547097 | None:intergenic |
| AGGAATAGCAATGGAATAGA+AGG | 0.440749 | 1_1:-63546986 | Msa0035380:CDS |
| TTATACTGAAGCTGAGCATC+AGG | 0.444025 | 1_1:-63547560 | Msa0035380:CDS |
| AGTTTCCACTGTTTGACTCT+TGG | 0.444341 | 1_1:+63547857 | None:intergenic |
| TTATACTGAAACTGAGCATC+AGG | 0.445424 | 1_1:-63547449 | Msa0035380:CDS |
| GAAGCTTCTGTTGTTTCTGA+TGG | 0.445970 | 1_1:-63547364 | Msa0035380:CDS |
| AGCAATGGAATAGAAGGTTC+AGG | 0.448760 | 1_1:-63546980 | Msa0035380:CDS |
| AACTTGCAATTGAACCCAAC+GGG | 0.449823 | 1_1:+63547683 | None:intergenic |
| CACTTTCCGTATCATGCCTA+GGG | 0.451455 | 1_1:+63546789 | None:intergenic |
| AGCTTGAGATTGTTGACAAA+GGG | 0.454249 | 1_1:-63547210 | Msa0035380:CDS |
| AATAGAGCGAAAAGAGGATT+GGG | 0.454588 | 1_1:+63546089 | None:intergenic |
| TCCTGCAAGTTGAATTTAGC+AGG | 0.458783 | 1_1:+63547736 | None:intergenic |
| TGAAACATATAACCAAAGTC+AGG | 0.459332 | 1_1:-63546708 | Msa0035380:intron |
| GATGCACTGAGAAAATGTTC+AGG | 0.461766 | 1_1:+63547658 | None:intergenic |
| GCACTTTCCGTATCATGCCT+AGG | 0.462980 | 1_1:+63546788 | None:intergenic |
| TGCATGAAGCTGATAAATAT+AGG | 0.464650 | 1_1:-63546339 | Msa0035380:CDS |
| GTGTGAAATCAGTGTGAAGA+AGG | 0.467565 | 1_1:+63549256 | None:intergenic |
| AATCCGAGTCTTTCTCCCTT+CGG | 0.470466 | 1_1:+63548797 | None:intergenic |
| GACATTCAGTTTGGGTTCTG+TGG | 0.471769 | 1_1:+63547105 | None:intergenic |
| GAATCAACACAACTGTAGAT+AGG | 0.471897 | 1_1:-63546282 | Msa0035380:CDS |
| GTGGCTCTTTCTACACTGTA+AGG | 0.472014 | 1_1:-63547801 | Msa0035380:CDS |
| AATTCAAGAAAATAGAGTGC+TGG | 0.476605 | 1_1:-63547761 | Msa0035380:CDS |
| CTCAGTGCATCATCAAATGA+AGG | 0.476801 | 1_1:-63547646 | Msa0035380:CDS |
| ACATTCAGTTTGGGTTCTGT+GGG | 0.477504 | 1_1:+63547106 | None:intergenic |
| ATCAGAAACAACAGAAGCTT+CGG | 0.480753 | 1_1:+63547366 | None:intergenic |
| TAGAAGGTTCAGGAGAATTG+AGG | 0.482054 | 1_1:-63546970 | Msa0035380:CDS |
| AGCGACAACAGTGGCTTCAA+TGG | 0.482213 | 1_1:+63547480 | None:intergenic |
| AGCATCAGGTGGTTGACAAT+GGG | 0.489034 | 1_1:-63547435 | Msa0035380:CDS |
| GAGAAATTTGAGAGTCCCCT+TGG | 0.490832 | 1_1:-63546839 | Msa0035380:CDS |
| AGAAGGTTCAGGAGAATTGA+GGG | 0.492321 | 1_1:-63546969 | Msa0035380:CDS |
| GGTTGTGTGGTATGACTATG+AGG | 0.492424 | 1_1:-63545861 | Msa0035380:three_prime_UTR |
| AAGCTTCTGTTGTTTCTGAT+GGG | 0.493641 | 1_1:-63547363 | Msa0035380:CDS |
| AGCTCAAGGTTGTTGACAAA+GGG | 0.499242 | 1_1:-63547324 | Msa0035380:CDS |
| AGAGAAGGATATAAAGAAGT+TGG | 0.501128 | 1_1:-63546930 | Msa0035380:CDS |
| TATAGGCTTGATGGTCAACT+TGG | 0.501804 | 1_1:-63546322 | Msa0035380:CDS |
| ATGTGAAGTTATTCTTCAGC+AGG | 0.504378 | 1_1:+63545952 | None:intergenic |
| ACACTGTAAGGGAGATTGTA+CGG | 0.505294 | 1_1:-63547789 | Msa0035380:CDS |
| TTTGTCAACAACCTTGAGCT+CGG | 0.510556 | 1_1:+63547327 | None:intergenic |
| GACAAAGGGCATGGCATCGA+TGG | 0.513666 | 1_1:-63547196 | Msa0035380:CDS |
| TATATTTATCAGCTTCATGC+AGG | 0.514009 | 1_1:+63546341 | None:intergenic |
| TTCCGTATCATGCCTAGGGT+TGG | 0.517395 | 1_1:+63546793 | None:intergenic |
| ACATTTCCATTGAGATCTGT+TGG | 0.519105 | 1_1:-63547010 | Msa0035380:CDS |
| ATTCAAGAAAATAGAGTGCT+GGG | 0.524858 | 1_1:-63547760 | Msa0035380:CDS |
| AGCTACTATACCTGAGATGC+AGG | 0.526391 | 1_1:-63547137 | Msa0035380:CDS |
| TCGGATTCGACGCTCTAAAG+AGG | 0.528962 | 1_1:-63548781 | Msa0035380:CDS |
| TTCCTACCAACAGATCTCAA+TGG | 0.530928 | 1_1:+63547004 | None:intergenic |
| CTCCAACCCTAGGCATGATA+CGG | 0.531026 | 1_1:-63546795 | Msa0035380:CDS |
| CTGTTGTAAAAGGTGGTTGG+AGG | 0.534279 | 1_1:-63548851 | Msa0035380:CDS |
| GTTTCACTGCAGAGAGTCAT+GGG | 0.534713 | 1_1:-63546144 | Msa0035380:intron |
| GGCAGCTACCACAGTACCAT+TGG | 0.536413 | 1_1:-63547071 | Msa0035380:CDS |
| CCATTTAGATTTGACTAACA+AGG | 0.536765 | 1_1:-63547506 | Msa0035380:CDS |
| GGTTTCACTGCAGAGAGTCA+TGG | 0.537898 | 1_1:-63546145 | Msa0035380:intron |
| AGAGCATTTACTTTAGCCAA+TGG | 0.543934 | 1_1:+63547055 | None:intergenic |
| GAACTTTCTTGAGTTCAGGA+TGG | 0.544040 | 1_1:+63547623 | None:intergenic |
| TCAGGAGAATTGAGGGACTC+TGG | 0.544330 | 1_1:-63546962 | Msa0035380:CDS |
| CTCTGGTAATTCCTTAGAGA+AGG | 0.546329 | 1_1:-63546945 | Msa0035380:CDS |
| GCTATTATCTACGCTGATTG+TGG | 0.546802 | 1_1:-63545990 | Msa0035380:three_prime_UTR |
| TCAGGTATAGTAGCTTCAAT+GGG | 0.548881 | 1_1:+63547145 | None:intergenic |
| GAGCATCAGGTGGTTGACAA+TGG | 0.551435 | 1_1:-63547436 | Msa0035380:CDS |
| AGCATCAGGTGGTTGACGAT+GGG | 0.552915 | 1_1:-63547546 | Msa0035380:CDS |
| ACGCTCTAAAGAGGAAAGAA+AGG | 0.556254 | 1_1:-63548772 | Msa0035380:CDS |
| TAAAGGAAATCTCCAACCCT+AGG | 0.557511 | 1_1:-63546805 | Msa0035380:CDS |
| TGCTTGGCAAGAGCAAATGT+TGG | 0.557759 | 1_1:+63548828 | None:intergenic |
| GCGCAGCATAGATACTAGCC+AGG | 0.560011 | 1_1:-63547302 | Msa0035380:CDS |
| GAGATTGTTGACAAAGGGCA+TGG | 0.567220 | 1_1:-63547205 | Msa0035380:CDS |
| CACTGTAAGGGAGATTGTAC+GGG | 0.570068 | 1_1:-63547788 | Msa0035380:CDS |
| GCTTTCAATAGAGCGAAAAG+AGG | 0.573031 | 1_1:+63546083 | None:intergenic |
| ACTGAATGTCGAACAAGAGT+TGG | 0.573820 | 1_1:-63547092 | Msa0035380:CDS |
| AGGCTTGATGGTCAACTTGG+TGG | 0.575093 | 1_1:-63546319 | Msa0035380:CDS |
| TTCCATTGAGATCTGTTGGT+AGG | 0.575819 | 1_1:-63547006 | Msa0035380:CDS |
| GAGCATCAGGTGGTTGACGA+TGG | 0.577300 | 1_1:-63547547 | Msa0035380:CDS |
| ATGCACTGAGAAAATGTTCA+GGG | 0.577392 | 1_1:+63547659 | None:intergenic |
| TTTCCCAAAGGCATTGACAA+TGG | 0.578706 | 1_1:+63546061 | None:intergenic |
| GAGCTCAAGGTTGTTGACAA+AGG | 0.582128 | 1_1:-63547325 | Msa0035380:CDS |
| TTATACTGGAACCGAGCTCA+AGG | 0.590294 | 1_1:-63547338 | Msa0035380:CDS |
| GCCAAGCAAAATGATTCCGA+AGG | 0.591551 | 1_1:-63548813 | Msa0035380:CDS |
| TGTGGTATGACTATGAGGGC+AGG | 0.594180 | 1_1:-63545856 | Msa0035380:three_prime_UTR |
| TGTTGTTTGTCACATCGACA+TGG | 0.596080 | 1_1:+63547395 | None:intergenic |
| CCAGGTAGACATGACAAACA+AGG | 0.596454 | 1_1:-63547284 | Msa0035380:CDS |
| TGCTGAAGAATAACTTCACA+TGG | 0.603325 | 1_1:-63545950 | Msa0035380:three_prime_UTR |
| TAAAGAGGAAAGAAAGGCAA+TGG | 0.604920 | 1_1:-63548766 | Msa0035380:CDS |
| CGCGGTAGATGTGATAAACA+AGG | 0.605122 | 1_1:-63547170 | Msa0035380:CDS |
| TGGCTCTTTCTACACTGTAA+GGG | 0.609781 | 1_1:-63547800 | Msa0035380:CDS |
| CAACTTGCAATTGAACCCAA+CGG | 0.609972 | 1_1:+63547682 | None:intergenic |
| TATTGTCGAGTAGCGTAGCG+AGG | 0.610584 | 1_1:-63549299 | Msa0035380:five_prime_UTR |
| TCTGTTGGTAGGAATAGCAA+TGG | 0.614572 | 1_1:-63546995 | Msa0035380:CDS |
| ATTCCGAAGGGAGAAAGACT+CGG | 0.621876 | 1_1:-63548800 | Msa0035380:CDS |
| TATCAGAAACAGAAAGCAGT+GGG | 0.627200 | 1_1:+63547587 | None:intergenic |
| ACTCTTACACATAAAGAAGT+CGG | 0.628566 | 1_1:-63547823 | Msa0035380:CDS |
| GAGCTTGAGATTGTTGACAA+AGG | 0.629639 | 1_1:-63547211 | Msa0035380:CDS |
| GATGGGCATGTCATAGATGT+TGG | 0.629886 | 1_1:-63547529 | Msa0035380:CDS |
| ATTGTCGAGTAGCGTAGCGA+GGG | 0.630230 | 1_1:-63549298 | Msa0035380:five_prime_UTR |
| TACTTTAGCCAATGGTACTG+TGG | 0.635115 | 1_1:+63547063 | None:intergenic |
| GTGGTATGACTATGAGGGCA+GGG | 0.637413 | 1_1:-63545855 | Msa0035380:three_prime_UTR |
| TACTGAAGCTGAGCATCAGG+TGG | 0.639952 | 1_1:-63547557 | Msa0035380:CDS |
| CCAAGCAAAATGATTCCGAA+GGG | 0.647968 | 1_1:-63548812 | Msa0035380:CDS |
| ATTCTGTTGTAAAAGGTGGT+TGG | 0.651800 | 1_1:-63548854 | Msa0035380:CDS |
| ATGCATTCTGTTGTAAAAGG+TGG | 0.653181 | 1_1:-63548858 | Msa0035380:CDS |
| TACTGAAACTGAGCATCAGG+TGG | 0.657285 | 1_1:-63547446 | Msa0035380:CDS |
| GTTGTGTGGTATGACTATGA+GGG | 0.680122 | 1_1:-63545860 | Msa0035380:three_prime_UTR |
| CTTACACATAAAGAAGTCGG+TGG | 0.685561 | 1_1:-63547820 | Msa0035380:CDS |
| AGGTACCAAGAGTCAAACAG+TGG | 0.692269 | 1_1:-63547862 | Msa0035380:CDS |
| TTATCAGAAACAGAAAGCAG+TGG | 0.699398 | 1_1:+63547586 | None:intergenic |
| ACTCTCATCAGCGACAACAG+TGG | 0.699689 | 1_1:+63547471 | None:intergenic |
| ACGCTACTCGACAATAGTGA+CGG | 0.701418 | 1_1:+63549306 | None:intergenic |
| CAGTAAATTAGAATTATCTG+CGG | 0.719411 | 1_1:+63546865 | None:intergenic |
| GCATGGCATCGATGGCAGCG+CGG | 0.725070 | 1_1:-63547188 | Msa0035380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTAAAAAGTAAAAG+GGG | + | chr1_1:63546500-63546519 | None:intergenic | 10.0% |
| !!! | CATAAATTTTAAAAAGTAAA+AGG | + | chr1_1:63546502-63546521 | None:intergenic | 10.0% |
| !! | TTCTATTATAAATACAAATA+AGG | + | chr1_1:63547071-63547090 | None:intergenic | 10.0% |
| !!! | ATAATCTAAAATTTTAGAAA+GGG | + | chr1_1:63549237-63549256 | None:intergenic | 10.0% |
| !!! | AATAATCTAAAATTTTAGAA+AGG | + | chr1_1:63549238-63549257 | None:intergenic | 10.0% |
| !! | AATTCAATTAAATAAGTATC+CGG | + | chr1_1:63546134-63546153 | None:intergenic | 15.0% |
| !! | ACAAATTGTTAAAATCAATT+AGG | + | chr1_1:63547167-63547186 | None:intergenic | 15.0% |
| !!! | GATTTTAACAATTTGTTTAA+AGG | - | chr1_1:63547171-63547190 | Msa0035380:CDS | 15.0% |
| !! | AAACTAAATTATGGATAAAA+AGG | + | chr1_1:63548463-63548482 | None:intergenic | 15.0% |
| !! | TGAAGTAAAGTTAATTAAAT+TGG | - | chr1_1:63548940-63548959 | Msa0035380:intron | 15.0% |
| !!! | TAATCTAAAATTTTAGAAAG+GGG | + | chr1_1:63549236-63549255 | None:intergenic | 15.0% |
| !! | GCGAAAATAAAAAAGAAAAT+GGG | + | chr1_1:63545990-63546009 | None:intergenic | 20.0% |
| !! | AGCGAAAATAAAAAAGAAAA+TGG | + | chr1_1:63545991-63546010 | None:intergenic | 20.0% |
| !! | AAATGAAAGAGAGAAATTAT+GGG | + | chr1_1:63546073-63546092 | None:intergenic | 20.0% |
| !! | AAAATGAAAGAGAGAAATTA+TGG | + | chr1_1:63546074-63546093 | None:intergenic | 20.0% |
| !! | ATTCAATTAAATAAGTATCC+GGG | + | chr1_1:63546133-63546152 | None:intergenic | 20.0% |
| !!! | AAGAAATTACTTTTGAATGA+AGG | + | chr1_1:63546407-63546426 | None:intergenic | 20.0% |
| !!! | AAACAATGAAAACTTTGTTT+TGG | - | chr1_1:63546606-63546625 | Msa0035380:intron | 20.0% |
| !! | TACACAAATAATAACACAAT+GGG | + | chr1_1:63547004-63547023 | None:intergenic | 20.0% |
| !!! | GTTTTGTTCTAAAAATTGAT+CGG | + | chr1_1:63547439-63547458 | None:intergenic | 20.0% |
| !!! | AATTACTTTCTTTCTAGTTA+TGG | - | chr1_1:63548710-63548729 | Msa0035380:intron | 20.0% |
| !!! | ATTACTTTCTTTCTAGTTAT+GGG | - | chr1_1:63548711-63548730 | Msa0035380:intron | 20.0% |
| !! | CTTTACTTCATTAAACTAAA+TGG | + | chr1_1:63548930-63548949 | None:intergenic | 20.0% |
| !!! | AATCTAAAATTTTAGAAAGG+GGG | + | chr1_1:63549235-63549254 | None:intergenic | 20.0% |
| !! | TAGGTTAGTTGAATGAAAAT+GGG | + | chr1_1:63546041-63546060 | None:intergenic | 25.0% |
| !! | TTAGGTTAGTTGAATGAAAA+TGG | + | chr1_1:63546042-63546061 | None:intergenic | 25.0% |
| !!! | ATTACTTTTGAATGAAGGAT+TGG | + | chr1_1:63546402-63546421 | None:intergenic | 25.0% |
| !! | AATTACTCATGTTTTATGCT+TGG | - | chr1_1:63546432-63546451 | Msa0035380:intron | 25.0% |
| ! | TTATATTGCTAACAAACGAA+TGG | - | chr1_1:63546525-63546544 | Msa0035380:intron | 25.0% |
| ! | AAAATTGTACAAGAAAACAG+TGG | - | chr1_1:63546667-63546686 | Msa0035380:intron | 25.0% |
| ! | AAATTGTACAAGAAAACAGT+GGG | - | chr1_1:63546668-63546687 | Msa0035380:intron | 25.0% |
| ! | TTAGCCTAAGTTTGATATAT+AGG | - | chr1_1:63546815-63546834 | Msa0035380:CDS | 25.0% |
| ! | CTACACAAATAATAACACAA+TGG | + | chr1_1:63547005-63547024 | None:intergenic | 25.0% |
| ! | TTATGTGTAAGAGTAATTGA+TGG | + | chr1_1:63547312-63547331 | None:intergenic | 25.0% |
| ! | CAGTAAATTAGAATTATCTG+CGG | + | chr1_1:63548279-63548298 | None:intergenic | 25.0% |
| !!! | TTTAACTTTTTGTTTCCAAG+GGG | + | chr1_1:63548320-63548339 | None:intergenic | 25.0% |
| !!! | CTTTAACTTTTTGTTTCCAA+GGG | + | chr1_1:63548321-63548340 | None:intergenic | 25.0% |
| ! | TTATCACCACTAAGAAAATT+TGG | - | chr1_1:63548489-63548508 | Msa0035380:intron | 25.0% |
| ! | TATCACCACTAAGAAAATTT+GGG | - | chr1_1:63548490-63548509 | Msa0035380:intron | 25.0% |
| ! | TAAACGATTCTGTATTGTAT+GGG | + | chr1_1:63548672-63548691 | None:intergenic | 25.0% |
| ! | ATAAACGATTCTGTATTGTA+TGG | + | chr1_1:63548673-63548692 | None:intergenic | 25.0% |
| ATGATGCATTCTGTTGTAAA+AGG | - | chr1_1:63546280-63546299 | Msa0035380:CDS | 30.0% | |
| TTCTGATAGATAGAAGAAGA+TGG | - | chr1_1:63546567-63546586 | Msa0035380:intron | 30.0% | |
| TCTGATAGATAGAAGAAGAT+GGG | - | chr1_1:63546568-63546587 | Msa0035380:intron | 30.0% | |
| AAAACAGTGGGAAAAATACT+GGG | - | chr1_1:63546680-63546699 | Msa0035380:intron | 30.0% | |
| AAATACTGGGAAATGATAAC+AGG | - | chr1_1:63546693-63546712 | Msa0035380:intron | 30.0% | |
| TGAATTGAAAGAAGCAATAC+TGG | - | chr1_1:63546785-63546804 | Msa0035380:CDS | 30.0% | |
| CACTCCTATATATCAAACTT+AGG | + | chr1_1:63546822-63546841 | None:intergenic | 30.0% | |
| GTGAATACGTTTAGCAAATA+CGG | + | chr1_1:63546915-63546934 | None:intergenic | 30.0% | |
| AAATAATAACACAATGGGAG+GGG | + | chr1_1:63546999-63547018 | None:intergenic | 30.0% | |
| CAAATAATAACACAATGGGA+GGG | + | chr1_1:63547000-63547019 | None:intergenic | 30.0% | |
| ACAAATAATAACACAATGGG+AGG | + | chr1_1:63547001-63547020 | None:intergenic | 30.0% | |
| CTATATAGTTACTTGTCTTC+AGG | - | chr1_1:63547259-63547278 | Msa0035380:CDS | 30.0% | |
| ACTCTTACACATAAAGAAGT+CGG | - | chr1_1:63547318-63547337 | Msa0035380:CDS | 30.0% | |
| AATTCAAGAAAATAGAGTGC+TGG | - | chr1_1:63547380-63547399 | Msa0035380:CDS | 30.0% | |
| ! | ATTCAAGAAAATAGAGTGCT+GGG | - | chr1_1:63547381-63547400 | Msa0035380:CDS | 30.0% |
| !!! | ATTTTTAGAACAAAACCCGT+TGG | - | chr1_1:63547443-63547462 | Msa0035380:CDS | 30.0% |
| !!! | TTTTTAGAACAAAACCCGTT+GGG | - | chr1_1:63547444-63547463 | Msa0035380:CDS | 30.0% |
| CCTTGTTAGTCAAATCTAAA+TGG | + | chr1_1:63547638-63547657 | None:intergenic | 30.0% | |
| CCATTTAGATTTGACTAACA+AGG | - | chr1_1:63547635-63547654 | Msa0035380:CDS | 30.0% | |
| CTTCTTTATATCCTTCTCTA+AGG | + | chr1_1:63548210-63548229 | None:intergenic | 30.0% | |
| AGAGAAGGATATAAAGAAGT+TGG | - | chr1_1:63548211-63548230 | Msa0035380:intron | 30.0% | |
| CGCAGATAATTCTAATTTAC+TGG | - | chr1_1:63548277-63548296 | Msa0035380:intron | 30.0% | |
| !! | CCTTTAACTTTTTGTTTCCA+AGG | + | chr1_1:63548322-63548341 | None:intergenic | 30.0% |
| CCTTGGAAACAAAAAGTTAA+AGG | - | chr1_1:63548319-63548338 | Msa0035380:intron | 30.0% | |
| TGAAACATATAACCAAAGTC+AGG | - | chr1_1:63548433-63548452 | Msa0035380:intron | 30.0% | |
| ATCACCACTAAGAAAATTTG+GGG | - | chr1_1:63548491-63548510 | Msa0035380:intron | 30.0% | |
| ! | GGAAGTAGTTTATATGCTTT+TGG | - | chr1_1:63548513-63548532 | Msa0035380:intron | 30.0% |
| CAAGAAAACACAACACAAAT+CGG | + | chr1_1:63548587-63548606 | None:intergenic | 30.0% | |
| ATAAATTGATGCAGTTACTG+AGG | + | chr1_1:63548619-63548638 | None:intergenic | 30.0% | |
| TCTGAAAATATTCAGACTCA+TGG | - | chr1_1:63548644-63548663 | Msa0035380:intron | 30.0% | |
| TATATTTATCAGCTTCATGC+AGG | + | chr1_1:63548803-63548822 | None:intergenic | 30.0% | |
| TGCATGAAGCTGATAAATAT+AGG | - | chr1_1:63548802-63548821 | Msa0035380:CDS | 30.0% | |
| ATCCAAGAATTCAGCAAAAA+AGG | - | chr1_1:63549027-63549046 | Msa0035380:intron | 30.0% | |
| !!! | TTCCTTTTTTGCTGAATTCT+TGG | + | chr1_1:63549032-63549051 | None:intergenic | 30.0% |
| TTCTGACAAAAATTTCCCAA+AGG | + | chr1_1:63549095-63549114 | None:intergenic | 30.0% | |
| !! | AAAATTTTAGAAAGGGGGAA+GGG | + | chr1_1:63549230-63549249 | None:intergenic | 30.0% |
| !! | TAAAATTTTAGAAAGGGGGA+AGG | + | chr1_1:63549231-63549250 | None:intergenic | 30.0% |
| !!! | TGATCTTGTTTTGATTGACT+TGG | - | chr1_1:63549259-63549278 | Msa0035380:five_prime_UTR | 30.0% |
| GAAGAAGAAGAAGAAGAAGA+GGG | + | chr1_1:63545915-63545934 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | + | chr1_1:63545916-63545935 | None:intergenic | 35.0% | |
| TAAATAAGTATCCGGGACTT+GGG | + | chr1_1:63546126-63546145 | None:intergenic | 35.0% | |
| TTAAATAAGTATCCGGGACT+TGG | + | chr1_1:63546127-63546146 | None:intergenic | 35.0% | |
| GATATGTTATGTAACCACTC+TGG | - | chr1_1:63546204-63546223 | Msa0035380:intron | 35.0% | |
| ATGCATTCTGTTGTAAAAGG+TGG | - | chr1_1:63546283-63546302 | Msa0035380:CDS | 35.0% | |
| ATTCTGTTGTAAAAGGTGGT+TGG | - | chr1_1:63546287-63546306 | Msa0035380:CDS | 35.0% | |
| TAAAGAGGAAAGAAAGGCAA+TGG | - | chr1_1:63546375-63546394 | Msa0035380:intron | 35.0% | |
| GAAAACAGTGGGAAAAATAC+TGG | - | chr1_1:63546679-63546698 | Msa0035380:intron | 35.0% | |
| AGAATGTAGATCTGTGTGAA+TGG | - | chr1_1:63547025-63547044 | Msa0035380:CDS | 35.0% | |
| ATGCACTGAGAAAATGTTCA+GGG | + | chr1_1:63547485-63547504 | None:intergenic | 35.0% | |
| TATCAGAAACAGAAAGCAGT+GGG | + | chr1_1:63547557-63547576 | None:intergenic | 35.0% | |
| TTATCAGAAACAGAAAGCAG+TGG | + | chr1_1:63547558-63547577 | None:intergenic | 35.0% | |
| TTATACTGAAACTGAGCATC+AGG | - | chr1_1:63547692-63547711 | Msa0035380:CDS | 35.0% | |
| ATCAGAAACAACAGAAGCTT+CGG | + | chr1_1:63547778-63547797 | None:intergenic | 35.0% | |
| !! | AAGCTTCTGTTGTTTCTGAT+GGG | - | chr1_1:63547778-63547797 | Msa0035380:CDS | 35.0% |
| AGCTTGAGATTGTTGACAAA+GGG | - | chr1_1:63547931-63547950 | Msa0035380:intron | 35.0% | |
| TCAGGTATAGTAGCTTCAAT+GGG | + | chr1_1:63547999-63548018 | None:intergenic | 35.0% | |
| TCTTGTTCGACATTCAGTTT+GGG | + | chr1_1:63548047-63548066 | None:intergenic | 35.0% | |
| ! | AGAGCATTTACTTTAGCCAA+TGG | + | chr1_1:63548089-63548108 | None:intergenic | 35.0% |
| ACATTTCCATTGAGATCTGT+TGG | - | chr1_1:63548131-63548150 | Msa0035380:intron | 35.0% | |
| AGGAATAGCAATGGAATAGA+AGG | - | chr1_1:63548155-63548174 | Msa0035380:intron | 35.0% | |
| TAAAAAGGCTAACCTGACTT+TGG | + | chr1_1:63548448-63548467 | None:intergenic | 35.0% | |
| TCACCACTAAGAAAATTTGG+GGG | - | chr1_1:63548492-63548511 | Msa0035380:intron | 35.0% | |
| !! | ACTTTCTTTCTAGTTATGGG+AGG | - | chr1_1:63548714-63548733 | Msa0035380:intron | 35.0% |
| GCTGATAAATATAGGCTTGA+TGG | - | chr1_1:63548810-63548829 | Msa0035380:CDS | 35.0% | |
| !! | AGTTGTGTTGATTCTTCTCT+GGG | + | chr1_1:63548853-63548872 | None:intergenic | 35.0% |
| GAATCAACACAACTGTAGAT+AGG | - | chr1_1:63548859-63548878 | Msa0035380:CDS | 35.0% | |
| AGCTAACTTGACCTTTCTAA+TGG | - | chr1_1:63548975-63548994 | Msa0035380:intron | 35.0% | |
| AATAGAGCGAAAAGAGGATT+GGG | + | chr1_1:63549055-63549074 | None:intergenic | 35.0% | |
| ATGTGAAGTTATTCTTCAGC+AGG | + | chr1_1:63549192-63549211 | None:intergenic | 35.0% | |
| TGCTGAAGAATAACTTCACA+TGG | - | chr1_1:63549191-63549210 | Msa0035380:intron | 35.0% | |
| !! | AAATTTTAGAAAGGGGGAAG+GGG | + | chr1_1:63549229-63549248 | None:intergenic | 35.0% |
| !!! | TTTTGATTGACTTGGTTGTG+TGG | - | chr1_1:63549267-63549286 | Msa0035380:five_prime_UTR | 35.0% |
| GTGTGAAATCAGTGTGAAGA+AGG | + | chr1_1:63545888-63545907 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCTTCTTCG+AGG | - | chr1_1:63545922-63545941 | Msa0035380:three_prime_UTR | 40.0% | |
| AAATTATGGGCGACAGACTT+AGG | + | chr1_1:63546060-63546079 | None:intergenic | 40.0% | |
| CATACAGTAAGTATCCAGAG+TGG | + | chr1_1:63546221-63546240 | None:intergenic | 40.0% | |
| TCTGGATACTTACTGTATGC+AGG | - | chr1_1:63546222-63546241 | Msa0035380:intron | 40.0% | |
| CCAAGCAAAATGATTCCGAA+GGG | - | chr1_1:63546329-63546348 | Msa0035380:CDS | 40.0% | |
| !! | ACGCTCTAAAGAGGAAAGAA+AGG | - | chr1_1:63546369-63546388 | Msa0035380:intron | 40.0% |
| GATAGATAGAAGAAGATGGG+AGG | - | chr1_1:63546571-63546590 | Msa0035380:intron | 40.0% | |
| AAACGTGCCTGACTTATTGT+AGG | - | chr1_1:63546729-63546748 | Msa0035380:CDS | 40.0% | |
| AACGTGCCTGACTTATTGTA+GGG | - | chr1_1:63546730-63546749 | Msa0035380:CDS | 40.0% | |
| AATACCCCCTACAATAAGTC+AGG | + | chr1_1:63546739-63546758 | None:intergenic | 40.0% | |
| AGTTTCCACTGTTTGACTCT+TGG | + | chr1_1:63547287-63547306 | None:intergenic | 40.0% | |
| CTTACACATAAAGAAGTCGG+TGG | - | chr1_1:63547321-63547340 | Msa0035380:CDS | 40.0% | |
| TGGCTCTTTCTACACTGTAA+GGG | - | chr1_1:63547341-63547360 | Msa0035380:CDS | 40.0% | |
| ACACTGTAAGGGAGATTGTA+CGG | - | chr1_1:63547352-63547371 | Msa0035380:CDS | 40.0% | |
| TCCTGCTAAATTCAACTTGC+AGG | - | chr1_1:63547404-63547423 | Msa0035380:CDS | 40.0% | |
| ! | TCCTGCAAGTTGAATTTAGC+AGG | + | chr1_1:63547408-63547427 | None:intergenic | 40.0% |
| AACTTGCAATTGAACCCAAC+GGG | + | chr1_1:63547461-63547480 | None:intergenic | 40.0% | |
| CAACTTGCAATTGAACCCAA+CGG | + | chr1_1:63547462-63547481 | None:intergenic | 40.0% | |
| GATGCACTGAGAAAATGTTC+AGG | + | chr1_1:63547486-63547505 | None:intergenic | 40.0% | |
| CTCAGTGCATCATCAAATGA+AGG | - | chr1_1:63547495-63547514 | Msa0035380:CDS | 40.0% | |
| GAACTTTCTTGAGTTCAGGA+TGG | + | chr1_1:63547521-63547540 | None:intergenic | 40.0% | |
| ! | TCTGGAACTTTCTTGAGTTC+AGG | + | chr1_1:63547525-63547544 | None:intergenic | 40.0% |
| TTATACTGAAGCTGAGCATC+AGG | - | chr1_1:63547581-63547600 | Msa0035380:CDS | 40.0% | |
| ! | TGTTGTTTGTCACATCGACA+TGG | + | chr1_1:63547749-63547768 | None:intergenic | 40.0% |
| !! | GAAGCTTCTGTTGTTTCTGA+TGG | - | chr1_1:63547777-63547796 | Msa0035380:CDS | 40.0% |
| ! | GTTTCTGATGGGCATTATAC+TGG | - | chr1_1:63547789-63547808 | Msa0035380:CDS | 40.0% |
| TTTGTCAACAACCTTGAGCT+CGG | + | chr1_1:63547817-63547836 | None:intergenic | 40.0% | |
| AGCTCAAGGTTGTTGACAAA+GGG | - | chr1_1:63547817-63547836 | Msa0035380:CDS | 40.0% | |
| CAAGGAATCTGTTGAAGCTT+CGG | - | chr1_1:63547875-63547894 | Msa0035380:intron | 40.0% | |
| GAGCTTGAGATTGTTGACAA+AGG | - | chr1_1:63547930-63547949 | Msa0035380:intron | 40.0% | |
| CTCAGGTATAGTAGCTTCAA+TGG | + | chr1_1:63548000-63548019 | None:intergenic | 40.0% | |
| ! | ACATTCAGTTTGGGTTCTGT+GGG | + | chr1_1:63548038-63548057 | None:intergenic | 40.0% |
| CTCTTGTTCGACATTCAGTT+TGG | + | chr1_1:63548048-63548067 | None:intergenic | 40.0% | |
| ACTGAATGTCGAACAAGAGT+TGG | - | chr1_1:63548049-63548068 | Msa0035380:intron | 40.0% | |
| TACTTTAGCCAATGGTACTG+TGG | + | chr1_1:63548081-63548100 | None:intergenic | 40.0% | |
| TTCCATTGAGATCTGTTGGT+AGG | - | chr1_1:63548135-63548154 | Msa0035380:intron | 40.0% | |
| TTCCTACCAACAGATCTCAA+TGG | + | chr1_1:63548140-63548159 | None:intergenic | 40.0% | |
| ! | TCTGTTGGTAGGAATAGCAA+TGG | - | chr1_1:63548146-63548165 | Msa0035380:intron | 40.0% |
| AGCAATGGAATAGAAGGTTC+AGG | - | chr1_1:63548161-63548180 | Msa0035380:intron | 40.0% | |
| TAGAAGGTTCAGGAGAATTG+AGG | - | chr1_1:63548171-63548190 | Msa0035380:intron | 40.0% | |
| AGAAGGTTCAGGAGAATTGA+GGG | - | chr1_1:63548172-63548191 | Msa0035380:intron | 40.0% | |
| CTCTGGTAATTCCTTAGAGA+AGG | - | chr1_1:63548196-63548215 | Msa0035380:intron | 40.0% | |
| TAAAGGAAATCTCCAACCCT+AGG | - | chr1_1:63548336-63548355 | Msa0035380:intron | 40.0% | |
| !! | TGCACTGACTTGTTCTTTGT+GGG | + | chr1_1:63548390-63548409 | None:intergenic | 40.0% |
| !! | ATGCACTGACTTGTTCTTTG+TGG | + | chr1_1:63548391-63548410 | None:intergenic | 40.0% |
| ! | CTTCCCCCAAATTTTCTTAG+TGG | + | chr1_1:63548498-63548517 | None:intergenic | 40.0% |
| ! | TATAGGCTTGATGGTCAACT+TGG | - | chr1_1:63548819-63548838 | Msa0035380:CDS | 40.0% |
| !! | CAGTTGTGTTGATTCTTCTC+TGG | + | chr1_1:63548854-63548873 | None:intergenic | 40.0% |
| CTGCAGTGAAACCATTAGAA+AGG | + | chr1_1:63548989-63549008 | None:intergenic | 40.0% | |
| CAATAGAGCGAAAAGAGGAT+TGG | + | chr1_1:63549056-63549075 | None:intergenic | 40.0% | |
| GCTTTCAATAGAGCGAAAAG+AGG | + | chr1_1:63549061-63549080 | None:intergenic | 40.0% | |
| AAAGCCATTGTCAATGCCTT+TGG | - | chr1_1:63549076-63549095 | Msa0035380:intron | 40.0% | |
| AAGCCATTGTCAATGCCTTT+GGG | - | chr1_1:63549077-63549096 | Msa0035380:intron | 40.0% | |
| !! | TTTCCCAAAGGCATTGACAA+TGG | + | chr1_1:63549083-63549102 | None:intergenic | 40.0% |
| ! | GCTATTATCTACGCTGATTG+TGG | - | chr1_1:63549151-63549170 | Msa0035380:intron | 40.0% |
| GTTGTGTGGTATGACTATGA+GGG | - | chr1_1:63549281-63549300 | Msa0035380:five_prime_UTR | 40.0% | |
| ACGCTACTCGACAATAGTGA+CGG | + | chr1_1:63545838-63545857 | None:intergenic | 45.0% | |
| ! | GTAGCGAGGGTTTGGATTTT+GGG | - | chr1_1:63545856-63545875 | Msa0035380:three_prime_UTR | 45.0% |
| ! | TAGCGAGGGTTTGGATTTTG+GGG | - | chr1_1:63545857-63545876 | Msa0035380:three_prime_UTR | 45.0% |
| CTACAAACTAACCCAAGTCC+CGG | - | chr1_1:63546112-63546131 | Msa0035380:CDS | 45.0% | |
| CTGTTGTAAAAGGTGGTTGG+AGG | - | chr1_1:63546290-63546309 | Msa0035380:CDS | 45.0% | |
| TGCTTGGCAAGAGCAAATGT+TGG | + | chr1_1:63546316-63546335 | None:intergenic | 45.0% | |
| GCCAAGCAAAATGATTCCGA+AGG | - | chr1_1:63546328-63546347 | Msa0035380:CDS | 45.0% | |
| ! | CCCTTCGGAATCATTTTGCT+TGG | + | chr1_1:63546332-63546351 | None:intergenic | 45.0% |
| ATTCCGAAGGGAGAAAGACT+CGG | - | chr1_1:63546341-63546360 | Msa0035380:CDS | 45.0% | |
| AATCCGAGTCTTTCTCCCTT+CGG | + | chr1_1:63546347-63546366 | None:intergenic | 45.0% | |
| AGATAGAAGAAGATGGGAGG+CGG | - | chr1_1:63546574-63546593 | Msa0035380:intron | 45.0% | |
| ACGTGCCTGACTTATTGTAG+GGG | - | chr1_1:63546731-63546750 | Msa0035380:CDS | 45.0% | |
| AGGTACCAAGAGTCAAACAG+TGG | - | chr1_1:63547279-63547298 | Msa0035380:CDS | 45.0% | |
| GTGGCTCTTTCTACACTGTA+AGG | - | chr1_1:63547340-63547359 | Msa0035380:CDS | 45.0% | |
| CACTGTAAGGGAGATTGTAC+GGG | - | chr1_1:63547353-63547372 | Msa0035380:CDS | 45.0% | |
| AGCAGTGGGTCATTTGTATC+TGG | + | chr1_1:63547543-63547562 | None:intergenic | 45.0% | |
| GATGGGCATGTCATAGATGT+TGG | - | chr1_1:63547612-63547631 | Msa0035380:CDS | 45.0% | |
| TACTGAAACTGAGCATCAGG+TGG | - | chr1_1:63547695-63547714 | Msa0035380:CDS | 45.0% | |
| AGCATCAGGTGGTTGACAAT+GGG | - | chr1_1:63547706-63547725 | Msa0035380:CDS | 45.0% | |
| GACAATGGGCATGTCGTAAA+TGG | - | chr1_1:63547720-63547739 | Msa0035380:CDS | 45.0% | |
| TTATACTGGAACCGAGCTCA+AGG | - | chr1_1:63547803-63547822 | Msa0035380:CDS | 45.0% | |
| GAGCTCAAGGTTGTTGACAA+AGG | - | chr1_1:63547816-63547835 | Msa0035380:CDS | 45.0% | |
| ! | CCTTGTTTGTCATGTCTACC+TGG | + | chr1_1:63547860-63547879 | None:intergenic | 45.0% |
| CCAGGTAGACATGACAAACA+AGG | - | chr1_1:63547857-63547876 | Msa0035380:CDS | 45.0% | |
| GAGATTGTTGACAAAGGGCA+TGG | - | chr1_1:63547936-63547955 | Msa0035380:intron | 45.0% | |
| CGCGGTAGATGTGATAAACA+AGG | - | chr1_1:63547971-63547990 | Msa0035380:intron | 45.0% | |
| AGCTACTATACCTGAGATGC+AGG | - | chr1_1:63548004-63548023 | Msa0035380:intron | 45.0% | |
| GGTTTACTTACCTGCATCTC+AGG | + | chr1_1:63548017-63548036 | None:intergenic | 45.0% | |
| ! | GACATTCAGTTTGGGTTCTG+TGG | + | chr1_1:63548039-63548058 | None:intergenic | 45.0% |
| GAGAAATTTGAGAGTCCCCT+TGG | - | chr1_1:63548302-63548321 | Msa0035380:intron | 45.0% | |
| CACTTTCCGTATCATGCCTA+GGG | + | chr1_1:63548355-63548374 | None:intergenic | 45.0% | |
| GATGCAGTTACTGAGGTATG+AGG | + | chr1_1:63548612-63548631 | None:intergenic | 45.0% | |
| GTTTCACTGCAGAGAGTCAT+GGG | - | chr1_1:63548997-63549016 | Msa0035380:intron | 45.0% | |
| GGTTGTGTGGTATGACTATG+AGG | - | chr1_1:63549280-63549299 | Msa0035380:five_prime_UTR | 45.0% | |
| !!! | ATAAATTTTAAAAAGTAAAA+GGG | + | chr1_1:63546501-63546520 | None:intergenic | 5.0% |
| !!! | TAATTTTAAAAACTAAATTA+TGG | + | chr1_1:63548472-63548491 | None:intergenic | 5.0% |
| TATTGTCGAGTAGCGTAGCG+AGG | - | chr1_1:63545842-63545861 | Msa0035380:three_prime_UTR | 50.0% | |
| ATTGTCGAGTAGCGTAGCGA+GGG | - | chr1_1:63545843-63545862 | Msa0035380:three_prime_UTR | 50.0% | |
| ! | CGTAGCGAGGGTTTGGATTT+TGG | - | chr1_1:63545855-63545874 | Msa0035380:three_prime_UTR | 50.0% |
| !! | TCGGATTCGACGCTCTAAAG+AGG | - | chr1_1:63546360-63546379 | Msa0035380:CDS | 50.0% |
| CGTGCCTGACTTATTGTAGG+GGG | - | chr1_1:63546732-63546751 | Msa0035380:CDS | 50.0% | |
| TACTGAAGCTGAGCATCAGG+TGG | - | chr1_1:63547584-63547603 | Msa0035380:CDS | 50.0% | |
| AGCATCAGGTGGTTGACGAT+GGG | - | chr1_1:63547595-63547614 | Msa0035380:CDS | 50.0% | |
| AGCGACAACAGTGGCTTCAA+TGG | + | chr1_1:63547664-63547683 | None:intergenic | 50.0% | |
| ACTCTCATCAGCGACAACAG+TGG | + | chr1_1:63547673-63547692 | None:intergenic | 50.0% | |
| GAGCATCAGGTGGTTGACAA+TGG | - | chr1_1:63547705-63547724 | Msa0035380:CDS | 50.0% | |
| TCAGGAGAATTGAGGGACTC+TGG | - | chr1_1:63548179-63548198 | Msa0035380:intron | 50.0% | |
| CTCCAACCCTAGGCATGATA+CGG | - | chr1_1:63548346-63548365 | Msa0035380:intron | 50.0% | |
| TTCCGTATCATGCCTAGGGT+TGG | + | chr1_1:63548351-63548370 | None:intergenic | 50.0% | |
| GCACTTTCCGTATCATGCCT+AGG | + | chr1_1:63548356-63548375 | None:intergenic | 50.0% | |
| ! | AGGCTTGATGGTCAACTTGG+TGG | - | chr1_1:63548822-63548841 | Msa0035380:CDS | 50.0% |
| GGTTTCACTGCAGAGAGTCA+TGG | - | chr1_1:63548996-63549015 | Msa0035380:intron | 50.0% | |
| TGTGGTATGACTATGAGGGC+AGG | - | chr1_1:63549285-63549304 | Msa0035380:five_prime_UTR | 50.0% | |
| GTGGTATGACTATGAGGGCA+GGG | - | chr1_1:63549286-63549305 | Msa0035380:five_prime_UTR | 50.0% | |
| GAGCATCAGGTGGTTGACGA+TGG | - | chr1_1:63547594-63547613 | Msa0035380:CDS | 55.0% | |
| GCGCAGCATAGATACTAGCC+AGG | - | chr1_1:63547839-63547858 | Msa0035380:CDS | 55.0% | |
| ! | GACAAAGGGCATGGCATCGA+TGG | - | chr1_1:63547945-63547964 | Msa0035380:intron | 55.0% |
| GGCAGCTACCACAGTACCAT+TGG | - | chr1_1:63548070-63548089 | Msa0035380:intron | 55.0% | |
| CGAGTAGCGTAGCGAGGGTT+TGG | - | chr1_1:63545848-63545867 | Msa0035380:three_prime_UTR | 60.0% | |
| !! | GCATGGCATCGATGGCAGCG+CGG | - | chr1_1:63547953-63547972 | Msa0035380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 63545831 | 63549332 | 63545831 | ID=Msa0035380;Name=Msa0035380 |
| chr1_1 | mRNA | 63545831 | 63549332 | 63545831 | ID=Msa0035380-mRNA-1;Parent=Msa0035380;Name=Msa0035380-mRNA-1;_AED=0.03;_eAED=0.03;_QI=137|1|1|1|0.75|0.8|5|215|509 |
| chr1_1 | exon | 63545831 | 63546154 | 63545831 | ID=Msa0035380-mRNA-1:exon:20218;Parent=Msa0035380-mRNA-1 |
| chr1_1 | exon | 63546274 | 63546383 | 63546274 | ID=Msa0035380-mRNA-1:exon:20217;Parent=Msa0035380-mRNA-1 |
| chr1_1 | exon | 63546709 | 63547882 | 63546709 | ID=Msa0035380-mRNA-1:exon:20216;Parent=Msa0035380-mRNA-1 |
| chr1_1 | exon | 63548747 | 63548919 | 63548747 | ID=Msa0035380-mRNA-1:exon:20215;Parent=Msa0035380-mRNA-1 |
| chr1_1 | exon | 63549232 | 63549332 | 63549232 | ID=Msa0035380-mRNA-1:exon:20214;Parent=Msa0035380-mRNA-1 |
| chr1_1 | five_prime_UTR | 63549232 | 63549332 | 63549232 | ID=Msa0035380-mRNA-1:five_prime_utr;Parent=Msa0035380-mRNA-1 |
| chr1_1 | five_prime_UTR | 63548884 | 63548919 | 63548884 | ID=Msa0035380-mRNA-1:five_prime_utr;Parent=Msa0035380-mRNA-1 |
| chr1_1 | CDS | 63548747 | 63548883 | 63548747 | ID=Msa0035380-mRNA-1:cds;Parent=Msa0035380-mRNA-1 |
| chr1_1 | CDS | 63546709 | 63547882 | 63546709 | ID=Msa0035380-mRNA-1:cds;Parent=Msa0035380-mRNA-1 |
| chr1_1 | CDS | 63546274 | 63546383 | 63546274 | ID=Msa0035380-mRNA-1:cds;Parent=Msa0035380-mRNA-1 |
| chr1_1 | CDS | 63546046 | 63546154 | 63546046 | ID=Msa0035380-mRNA-1:cds;Parent=Msa0035380-mRNA-1 |
| chr1_1 | three_prime_UTR | 63545831 | 63546045 | 63545831 | ID=Msa0035380-mRNA-1:three_prime_utr;Parent=Msa0035380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
