AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1013880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013880 MtrunA17_Chr7g0226291 99.358 934 6 0 1 934 225 1158 0.0 1918
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013880 AT3G01780.1 80.733 955 160 5 1 934 225 1176 0.0 1548
Msa1013880 AT3G01780.2 84.091 616 96 1 1 614 225 840 0.0 1040

Find 247 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCCTCGTCATCGGATTT+TGG 0.159277 7_1:-21244129 None:intergenic
ATCTAGTCTCATTCAAAATT+TGG 0.164251 7_1:-21237769 None:intergenic
GTTAATTTGTGATGGCTAAA+TGG 0.170578 7_1:-21239482 None:intergenic
ACAACACCACTGCCATAAAA+TGG 0.192881 7_1:-21242849 None:intergenic
AGCCTCCTCGGCAGTTAATT+TGG 0.211870 7_1:-21244223 None:intergenic
GAATATTGGCCCGACTTATA+TGG 0.215911 7_1:+21238759 Msa1013880:CDS
ACTTGGCATGGTGGCTTCTT+GGG 0.216119 7_1:+21243835 Msa1013880:CDS
ATCTGGTGCATTATATTATA+TGG 0.227704 7_1:+21240249 Msa1013880:CDS
GAAGAAACGTAGGGCGTTAA+TGG 0.228821 7_1:+21236196 Msa1013880:CDS
TGGGATTAATATGTTGTATT+TGG 0.242766 7_1:+21236463 Msa1013880:CDS
AACTTGGCATGGTGGCTTCT+TGG 0.245933 7_1:+21243834 Msa1013880:CDS
TCACTCTGGCATCTTCAAAA+AGG 0.246327 7_1:-21237403 None:intergenic
TTTGTCGGCCTTGTGTTAAA+TGG 0.260377 7_1:+21237630 Msa1013880:CDS
TGTGTTTCCGGTTGTTTATT+CGG 0.264667 7_1:+21236259 Msa1013880:CDS
GCTACTTGAAGTTGCTTGTT+AGG 0.266834 7_1:+21237684 Msa1013880:CDS
GGAGATTGGGTCAGATCTTC+AGG 0.268433 7_1:+21243969 Msa1013880:CDS
ATATGAAGGGAGTGGCTTTC+AGG 0.273356 7_1:+21243088 Msa1013880:CDS
CTTTGAAAGATGTGCCCTTT+GGG 0.288026 7_1:+21242809 Msa1013880:CDS
AAAACTCGACAGGTGATATT+TGG 0.289162 7_1:-21243013 None:intergenic
CTGGTTATGGTGCATTAAAT+TGG 0.301683 7_1:+21237579 Msa1013880:CDS
CTAAAGAACTTGAAGAGTTT+AGG 0.309378 7_1:+21238996 Msa1013880:CDS
GCCGATTTCACTTCATCTTC+AGG 0.310893 7_1:-21244033 None:intergenic
TCGGTTAAAGCTGTTGCTTC+GGG 0.311592 7_1:+21236278 Msa1013880:CDS
CCTACTGCAAATACTTTAAC+TGG 0.314056 7_1:+21239653 Msa1013880:CDS
AATCACGGGTTCACCTAATT+CGG 0.318225 7_1:-21242940 None:intergenic
TCAGATACCGGACAGTTTCT+TGG 0.329413 7_1:-21244458 None:intergenic
CTATCCTTTCCATTGATATT+CGG 0.333589 7_1:-21244071 None:intergenic
TTCGGTTAAAGCTGTTGCTT+CGG 0.337636 7_1:+21236277 Msa1013880:CDS
CGGGCGGGGTTGAGGTTATT+CGG 0.338905 7_1:+21236297 Msa1013880:CDS
GAGGATAACTCTGCATTTAA+AGG 0.339924 7_1:+21239730 Msa1013880:CDS
GTCATTGGAGCTTTGGCATA+TGG 0.345189 7_1:+21237554 Msa1013880:CDS
GGAAAGGATAGCCTTGTTAA+AGG 0.349186 7_1:+21244083 Msa1013880:CDS
ACTTTGAAAGATGTGCCCTT+TGG 0.351108 7_1:+21242808 Msa1013880:CDS
TTTGGTTTCATCGTTGGAAC+CGG 0.354301 7_1:+21236424 Msa1013880:CDS
GGATAGAAAGTTGGAAGGTT+TGG 0.355407 7_1:+21239535 Msa1013880:CDS
TGATGCTAATGCTGAGAAAT+TGG 0.355770 7_1:+21236364 Msa1013880:CDS
CTGCTAGAGAGAGTATTGTT+AGG 0.356489 7_1:+21236570 Msa1013880:CDS
AGTAAGTAGAAATGTGGATT+TGG 0.361165 7_1:+21243882 Msa1013880:CDS
AGTTGATGCTACTTCACTTA+AGG 0.361527 7_1:+21239625 Msa1013880:CDS
AGTCAAAGATGGAGCTTCTC+AGG 0.361908 7_1:+21237745 Msa1013880:CDS
TTTGAAATAATGACATTAAG+AGG 0.362114 7_1:-21238845 None:intergenic
AGAAGCTTAAGGCCCGAATT+AGG 0.364047 7_1:+21242927 Msa1013880:CDS
TTCGGATGTGGTTACACATT+TGG 0.364244 7_1:+21236394 Msa1013880:CDS
TTCTACAATAGCTGGCAAAC+TGG 0.365437 7_1:-21243048 None:intergenic
TCTTATATCTGCTCAAAGAT+TGG 0.365846 7_1:+21238940 Msa1013880:CDS
TTGGCATATGGAACTGGTTA+TGG 0.373929 7_1:+21237566 Msa1013880:CDS
TCTAATTTGTATAAGAAAAG+AGG 0.379571 7_1:-21244418 None:intergenic
TGAGAAATTGGTTGGTGTTT+CGG 0.381055 7_1:+21236376 Msa1013880:CDS
TAACCGAGCTCGAACTAAAT+CGG 0.382857 7_1:+21240206 Msa1013880:CDS
CAAAGAATCAAATATGCTTC+AGG 0.384897 7_1:+21239070 Msa1013880:CDS
GGTTAATACACCAAGAATAT+TGG 0.387994 7_1:+21238745 Msa1013880:intron
TGTTGCTTCGGGCGGGGTTG+AGG 0.391870 7_1:+21236289 Msa1013880:CDS
GAGCAGGGTCATTGGAGCTT+TGG 0.394409 7_1:+21237547 Msa1013880:CDS
CGGCGTTGATTTATGAGGTT+GGG 0.394759 7_1:+21236444 Msa1013880:CDS
TTGTATTTGGCTGATGTGCC+TGG 0.395394 7_1:+21236476 Msa1013880:CDS
TTAATTTGTGATGGCTAAAT+GGG 0.395583 7_1:-21239481 None:intergenic
GATGTACGTGTTGGATTATC+TGG 0.396049 7_1:+21240232 Msa1013880:CDS
TATGCTGCATATTTGATACT+AGG 0.396455 7_1:+21237708 Msa1013880:CDS
CATATTATCCGCACAGTGGC+AGG 0.396478 7_1:+21243197 Msa1013880:CDS
ATAAGTCGGGCCAATATTCT+TGG 0.397079 7_1:-21238755 None:intergenic
TAATATTCGTACCTACTATC+AGG 0.400442 7_1:-21239097 None:intergenic
CAACTCCTTTAGTCAGCAAA+AGG 0.402044 7_1:-21239607 None:intergenic
ATGACATTAAGAGGATCATC+TGG 0.405842 7_1:-21238836 None:intergenic
CAGCAAAAGGGTTAGTTCAC+TGG 0.406173 7_1:-21239594 None:intergenic
TTAAAGCTGTTGCTTCGGGC+GGG 0.408866 7_1:+21236282 Msa1013880:CDS
GCATCTATTACTAAGGAGAT+TGG 0.410459 7_1:+21243955 Msa1013880:CDS
TGGAGTCTTGGGTCGTGGTT+GGG 0.414750 7_1:-21244109 None:intergenic
AGTGATCCTTGCTATGTTGA+AGG 0.415041 7_1:+21239680 Msa1013880:CDS
CTTATATCTGCTCAAAGATT+GGG 0.415387 7_1:+21238941 Msa1013880:CDS
TTATGAAGCATCTGCTGCTC+AGG 0.420077 7_1:+21239514 Msa1013880:CDS
TTGGAGTCTTGGGTCGTGGT+TGG 0.422329 7_1:-21244110 None:intergenic
GGCATGGAGAGCAGGGTCAT+TGG 0.422630 7_1:+21237539 Msa1013880:CDS
TTCCTCATCTTCCTCGTCAT+CGG 0.422961 7_1:-21244136 None:intergenic
CAGATACCGGACAGTTTCTT+GGG 0.423148 7_1:-21244457 None:intergenic
TGCGATCAGATTCTGCTCTC+AGG 0.425044 7_1:-21237274 None:intergenic
GGAGGAGTTAGTTGCTTCAC+TGG 0.427549 7_1:+21237466 Msa1013880:CDS
AAAACTCGGGCATGGAGAGC+AGG 0.431676 7_1:+21237531 Msa1013880:CDS
ATCACGGGTTCACCTAATTC+GGG 0.432187 7_1:-21242939 None:intergenic
GTTAATTTGGATAGAGTTGA+AGG 0.432722 7_1:-21244210 None:intergenic
GCTACTGCAGCACAGCAGTA+TGG 0.434340 7_1:+21243110 Msa1013880:CDS
AGAGTTTAGGACCAATGCTT+TGG 0.435003 7_1:+21239009 Msa1013880:CDS
ATCTGATGCATCTATTACTA+AGG 0.442411 7_1:+21243948 Msa1013880:CDS
GGAGCTTTGGCATATGGAAC+TGG 0.444107 7_1:+21237560 Msa1013880:CDS
TTGTCGGCCTTGTGTTAAAT+GGG 0.446077 7_1:+21237631 Msa1013880:CDS
AATATTGGCCCGACTTATAT+GGG 0.451051 7_1:+21238760 Msa1013880:CDS
GTAAGTAGAAATGTGGATTT+GGG 0.455286 7_1:+21243883 Msa1013880:CDS
CTTGGCATGGTGGCTTCTTG+GGG 0.455488 7_1:+21243836 Msa1013880:CDS
TCTTCTAGTGTAGGTGGTGG+GGG 0.455883 7_1:+21236332 Msa1013880:CDS
CTCTTCTGTCTCATGACTTG+AGG 0.458622 7_1:-21242906 None:intergenic
TCTTACACTGTGGGATAGAC+AGG 0.458798 7_1:+21236538 Msa1013880:CDS
CGAGAGGTTTCTGACCTCTT+CGG 0.458989 7_1:-21237361 None:intergenic
CAACACCACTGCCATAAAAT+GGG 0.461271 7_1:-21242848 None:intergenic
TAAAGCTGTTGCTTCGGGCG+GGG 0.461441 7_1:+21236283 Msa1013880:CDS
TGCTAGAGAGAGTATTGTTA+GGG 0.461903 7_1:+21236571 Msa1013880:CDS
GTAAGTAACTGTCCAGCTCT+AGG 0.463428 7_1:-21238974 None:intergenic
AAGATCAAGCAGATGAAGAT+TGG 0.465070 7_1:-21236603 None:intergenic
GCACATAGATATAGAAGGAT+TGG 0.465484 7_1:+21238793 Msa1013880:CDS
TAGAAGTGGTGGAAGTTTGT+CGG 0.468417 7_1:+21237615 Msa1013880:CDS
GCGGAGCACATAGATATAGA+AGG 0.471048 7_1:+21238788 Msa1013880:CDS
CTTCAGGTCATCCTGATAGT+AGG 0.473808 7_1:+21239086 Msa1013880:CDS
TGATTCTTTGCAATATCAAA+CGG 0.473960 7_1:-21239057 None:intergenic
ATAAAGAGAAAAGGAAGGAC+GGG 0.474690 7_1:+21244163 Msa1013880:CDS
GCCTGAAGATGAAGTGAAAT+CGG 0.475296 7_1:+21244032 Msa1013880:CDS
GTGAACTTGTGAAGAACTTA+CGG 0.478342 7_1:+21237807 Msa1013880:CDS
GCCTGGAGGGAAAACGGAAT+GGG 0.482786 7_1:+21236493 Msa1013880:CDS
AGCAAAAGGGTTAGTTCACT+GGG 0.482862 7_1:-21239593 None:intergenic
ATTGGTTGGTGTTTCGGATG+TGG 0.483912 7_1:+21236382 Msa1013880:CDS
CATCTATTACTAAGGAGATT+GGG 0.485965 7_1:+21243956 Msa1013880:CDS
ACCGGTACATATACATATGA+AGG 0.486666 7_1:+21243074 Msa1013880:CDS
ACTTCCACCACTTCTAAAGA+AGG 0.487613 7_1:-21237608 None:intergenic
GGAACCGGCGTTGATTTATG+AGG 0.487715 7_1:+21236439 Msa1013880:CDS
GTCTTCTAGTGTAGGTGGTG+GGG 0.488329 7_1:+21236331 Msa1013880:CDS
AGGGTTAGTTCACTGGGGTC+AGG 0.488523 7_1:-21239587 None:intergenic
GCTAAATGGGTAATCACCTC+TGG 0.488759 7_1:-21239468 None:intergenic
TCTGCTTGATCTTAATATGC+AGG 0.489036 7_1:+21236613 Msa1013880:CDS
CATTTAGCAGATTCAAGTGA+TGG 0.489773 7_1:+21239707 Msa1013880:CDS
ATGCTGCATATTTGATACTA+GGG 0.492565 7_1:+21237709 Msa1013880:CDS
ATTGAACAGTTAATTTGTGA+TGG 0.494125 7_1:-21239490 None:intergenic
AACCGAGCTCGAACTAAATC+GGG 0.497303 7_1:+21240207 Msa1013880:CDS
GATCATCTGGGTCGTCTGCT+AGG 0.498061 7_1:-21238823 None:intergenic
GTTGCGTAATCTTGTTTCAC+AGG 0.499213 7_1:+21240297 Msa1013880:CDS
TTGTGTGGATCTATTTGCTA+AGG 0.499652 7_1:+21237331 Msa1013880:CDS
AGTCTTCTAGTGTAGGTGGT+GGG 0.500932 7_1:+21236330 Msa1013880:CDS
CCGGCGTTGATTTATGAGGT+TGG 0.501021 7_1:+21236443 Msa1013880:CDS
TAATATGTGAACAAACTTTG+TGG 0.502421 7_1:-21243181 None:intergenic
AAATAGAGTTCAAGATGTAC+AGG 0.503922 7_1:+21238913 Msa1013880:CDS
CCGGTGTATTCTACAATAGC+TGG 0.504125 7_1:-21243056 None:intergenic
GTAGCCCGAAAATTCTCAAC+CGG 0.505696 7_1:-21236236 None:intergenic
GATAAAGAGAAAAGGAAGGA+CGG 0.506759 7_1:+21244162 Msa1013880:CDS
CGCAATAGCCCATATAAGTC+GGG 0.507179 7_1:-21238768 None:intergenic
TGCTGCTCAGGATAGAAAGT+TGG 0.512012 7_1:+21239526 Msa1013880:CDS
AGGAAGAGGATAAAGAGAAA+AGG 0.512548 7_1:+21244154 Msa1013880:CDS
ACAAACTTTGTGGAATGGCT+TGG 0.516819 7_1:-21243171 None:intergenic
CCAGTTAAAGTATTTGCAGT+AGG 0.516852 7_1:-21239653 None:intergenic
GGATCACGCCACCCTAGAGC+TGG 0.518975 7_1:+21238962 Msa1013880:CDS
ACTGTTACACTGCACAGCAC+TGG 0.519547 7_1:-21242774 None:intergenic
TGAACTTGTGAAGAACTTAC+GGG 0.521521 7_1:+21237808 Msa1013880:CDS
CTAATTTGTATAAGAAAAGA+GGG 0.522055 7_1:-21244417 None:intergenic
AAGTCTTCTAGTGTAGGTGG+TGG 0.522517 7_1:+21236329 Msa1013880:CDS
TCTACAATAGCTGGCAAACT+GGG 0.523526 7_1:-21243047 None:intergenic
AACTCTATTTGTTGTATCTG+CGG 0.524499 7_1:-21238900 None:intergenic
GTTAAAGCTGTTGCTTCGGG+CGG 0.525623 7_1:+21236281 Msa1013880:CDS
GCTTTAACCGAATAAACAAC+CGG 0.525739 7_1:-21236266 None:intergenic
CACCCGATTTAGTTCGAGCT+CGG 0.528080 7_1:-21240209 None:intergenic
TGCTTGATGCTCAGCCTCCT+CGG 0.528571 7_1:-21244235 None:intergenic
GACTGAACCTTCTTTAGAAG+TGG 0.529974 7_1:+21237601 Msa1013880:CDS
AAAAGAATACACTCAGATAC+CGG 0.530520 7_1:-21244470 None:intergenic
AACCATGATGTGCAAGTTTG+TGG 0.530660 7_1:+21243918 Msa1013880:CDS
TGTGTTATGCTGCTAAAACT+TGG 0.531973 7_1:+21243818 Msa1013880:CDS
AACTCCTTTAGTCAGCAAAA+GGG 0.534817 7_1:-21239606 None:intergenic
TGCCTGGAGGGAAAACGGAA+TGG 0.536102 7_1:+21236492 Msa1013880:CDS
TGACGAGGAAGATGAGGAAG+AGG 0.538000 7_1:+21244140 Msa1013880:CDS
TGATGATCTAACTGATGGTG+GGG 0.538441 7_1:+21243999 Msa1013880:CDS
TATTGCTATTCTTACACTGT+GGG 0.538581 7_1:+21236529 Msa1013880:CDS
AGAGGATAAAGAGAAAAGGA+AGG 0.539664 7_1:+21244158 Msa1013880:CDS
TGAGACAGAAGAGAAGCTTA+AGG 0.542919 7_1:+21242916 Msa1013880:CDS
GGTGCATTATATTATATGGA+TGG 0.543026 7_1:+21240253 Msa1013880:CDS
GTTAAAGTATTTGCAGTAGG+AGG 0.545607 7_1:-21239650 None:intergenic
TGAACCTTCTTTAGAAGTGG+TGG 0.546030 7_1:+21237604 Msa1013880:CDS
GTGATGATCTAACTGATGGT+GGG 0.546182 7_1:+21243998 Msa1013880:CDS
CTTTCGAAGTCTTCTAGTGT+AGG 0.546456 7_1:+21236323 Msa1013880:CDS
TACCACAAACTTGCACATCA+TGG 0.547122 7_1:-21243920 None:intergenic
GATTTCAGTCCACTCAAGAA+AGG 0.547452 7_1:-21243140 None:intergenic
TAAGTAACTGTCCAGCTCTA+GGG 0.547522 7_1:-21238973 None:intergenic
TTGGGTCAGATCTTCAGGGT+TGG 0.547572 7_1:+21243974 Msa1013880:CDS
TGATGTGCCTGGAGGGAAAA+CGG 0.552507 7_1:+21236487 Msa1013880:CDS
CCCTTCATATGTATATGTAC+CGG 0.552969 7_1:-21243075 None:intergenic
GAGATTGGGTCAGATCTTCA+GGG 0.556946 7_1:+21243970 Msa1013880:CDS
ATACAACACTTGAACCCAAA+GGG 0.558462 7_1:-21242823 None:intergenic
TACAGAATCAGCCAAAGCAT+TGG 0.560578 7_1:-21239020 None:intergenic
ACTTCGCCCAAGAAACTGTC+CGG 0.563364 7_1:+21244451 Msa1013880:three_prime_UTR
AGAGGTCAGAAACCTCTCGC+TGG 0.564639 7_1:+21237365 Msa1013880:CDS
ATCCGATGACGAGGAAGATG+AGG 0.565308 7_1:+21244134 Msa1013880:CDS
TGGTTGGGCTGCCTTTAACA+AGG 0.566030 7_1:-21244094 None:intergenic
GTGGAATGGCTTGGAAGACA+AGG 0.572334 7_1:-21243162 None:intergenic
ATTTAGCAGATTCAAGTGAT+GGG 0.576560 7_1:+21239708 Msa1013880:CDS
GGTTGACATCTCAAAATCAC+GGG 0.579470 7_1:-21242954 None:intergenic
TTTGCAATATCAAACGGCAC+TGG 0.583661 7_1:-21239051 None:intergenic
GGTGCGTCACCTTTCTTGAG+TGG 0.584149 7_1:+21243131 Msa1013880:CDS
TGAAGTGAAATCGGCTGCTG+CGG 0.585339 7_1:+21244041 Msa1013880:CDS
GGAGAGACTCCGAATATCAA+TGG 0.587157 7_1:+21244062 Msa1013880:CDS
CATTATTTCAAATATTCGCA+AGG 0.589606 7_1:+21238856 Msa1013880:CDS
GGCATATGCTCTGCAAGGAT+AGG 0.590247 7_1:+21244283 Msa1013880:CDS
AATCGGGTGGATGTACGTGT+TGG 0.590768 7_1:+21240223 Msa1013880:CDS
AAACTCGGGCATGGAGAGCA+GGG 0.591196 7_1:+21237532 Msa1013880:CDS
TTGTAGAACAGCTCTTTGTG+TGG 0.591335 7_1:+21237316 Msa1013880:CDS
AAATAGTTAGTTAACTTCAG+TGG 0.591740 7_1:-21244307 None:intergenic
CCGCAATAGCCCATATAAGT+CGG 0.592567 7_1:-21238769 None:intergenic
TGATAACCTTCAACATAGCA+AGG 0.593849 7_1:-21239686 None:intergenic
AAAGGGCACATCTTTCAAAG+TGG 0.594211 7_1:-21242806 None:intergenic
TGTGATGATCTAACTGATGG+TGG 0.594828 7_1:+21243997 Msa1013880:CDS
ACATATACATATGAAGGGAG+TGG 0.595377 7_1:+21243080 Msa1013880:CDS
TGTAGGTTTCACTCTTCAAG+AGG 0.595902 7_1:+21237231 Msa1013880:intron
TCGAAGTCTTCTAGTGTAGG+TGG 0.596445 7_1:+21236326 Msa1013880:CDS
CAAGTAGCAGTCAATTGCAT+AGG 0.597362 7_1:-21237669 None:intergenic
GACTCCGAATATCAATGGAA+AGG 0.597412 7_1:+21244067 Msa1013880:CDS
TGTGAACAAACTTTGTGGAA+TGG 0.598234 7_1:-21243176 None:intergenic
AAGGGCACATCTTTCAAAGT+GGG 0.599992 7_1:-21242805 None:intergenic
AGGTTGACATCTCAAAATCA+CGG 0.602289 7_1:-21242955 None:intergenic
CCGACTTATATGGGCTATTG+CGG 0.603364 7_1:+21238769 Msa1013880:CDS
CTGGCAAACTGGGCCACAGT+CGG 0.603514 7_1:-21243037 None:intergenic
TGAAGGTGACTATGCTGAGG+AGG 0.607190 7_1:+21242881 Msa1013880:CDS
TCTGGGTCGTCTGCTAGGAG+TGG 0.607555 7_1:-21238818 None:intergenic
TAAAGAGAAAAGGAAGGACG+GGG 0.609459 7_1:+21244164 Msa1013880:CDS
CCGGTACATATACATATGAA+GGG 0.609607 7_1:+21243075 Msa1013880:CDS
TGGTGTGATGATCTAACTGA+TGG 0.613361 7_1:+21243994 Msa1013880:CDS
AAGTGAAGTAAGTAGAAATG+TGG 0.614298 7_1:+21243876 Msa1013880:CDS
GGTAGAAGTAGCTCAGTCAA+TGG 0.616340 7_1:-21242987 None:intergenic
TGTGTTAAATGGGATTGTGA+TGG 0.616729 7_1:+21237641 Msa1013880:CDS
AGCAGTCAATTGCATAGGTG+CGG 0.627920 7_1:-21237664 None:intergenic
TGCTGCATATTTGATACTAG+GGG 0.628062 7_1:+21237710 Msa1013880:CDS
ATATTATCCGCACAGTGGCA+GGG 0.628489 7_1:+21243198 Msa1013880:CDS
GTTAAGATCATCACTCACTC+TGG 0.629408 7_1:-21237417 None:intergenic
GCAATATCAGTTCCAGCGAG+AGG 0.633112 7_1:-21237377 None:intergenic
GACTCCAAAATCCGATGACG+AGG 0.633917 7_1:+21244125 Msa1013880:CDS
TGACATTAAGAGGATCATCT+GGG 0.639148 7_1:-21238835 None:intergenic
GCTCAGGATAGAAAGTTGGA+AGG 0.639628 7_1:+21239530 Msa1013880:CDS
GCTAATGCTGAGAAATTGGT+TGG 0.641411 7_1:+21236368 Msa1013880:CDS
GCTGCTAAAACTTGGCATGG+TGG 0.642339 7_1:+21243826 Msa1013880:CDS
TATGCTGCTAAAACTTGGCA+TGG 0.642883 7_1:+21243823 Msa1013880:CDS
ATCCAAATTAACTGCCGAGG+AGG 0.645005 7_1:+21244221 Msa1013880:CDS
GTGCTGTGCAGTGTAACAGT+TGG 0.645590 7_1:+21242777 Msa1013880:CDS
GGTGTTGTTGGAGACTATGA+AGG 0.645680 7_1:+21242864 Msa1013880:CDS
TAGCAGATTCAAGTGATGGG+AGG 0.646543 7_1:+21239711 Msa1013880:CDS
GTAACTGTCCAGCTCTAGGG+TGG 0.647951 7_1:-21238970 None:intergenic
AAGCAGCAGTACTACAAGAG+TGG 0.648117 7_1:+21244262 Msa1013880:CDS
AATACAACACTTGAACCCAA+AGG 0.650354 7_1:-21242824 None:intergenic
CTATGAAGGTGACTATGCTG+AGG 0.650850 7_1:+21242878 Msa1013880:CDS
ATTTGGCTGATGTGCCTGGA+GGG 0.650868 7_1:+21236480 Msa1013880:CDS
TCTATCCAAATTAACTGCCG+AGG 0.652728 7_1:+21244218 Msa1013880:CDS
TGATCTAACTGATGGTGGGG+TGG 0.654754 7_1:+21244002 Msa1013880:CDS
CCAGCTATTGTAGAATACAC+CGG 0.655504 7_1:+21243056 Msa1013880:CDS
AGAGTGGCATATGCTCTGCA+AGG 0.657481 7_1:+21244278 Msa1013880:CDS
TGCATATTTGATACTAGGGG+CGG 0.660256 7_1:+21237713 Msa1013880:CDS
TATTTGGCTGATGTGCCTGG+AGG 0.660452 7_1:+21236479 Msa1013880:CDS
GGTGTAAAGAGAGTCAAAGA+TGG 0.662188 7_1:+21237734 Msa1013880:CDS
TCACAATCCCATTTAACACA+AGG 0.667274 7_1:-21237638 None:intergenic
CCTGAAACCCTGCCACTGTG+CGG 0.667866 7_1:-21243205 None:intergenic
GCTGGTGTTACAGCAGCCAG+AGG 0.683064 7_1:+21239452 Msa1013880:CDS
CTATTGCTATTCTTACACTG+TGG 0.693944 7_1:+21236528 Msa1013880:CDS
CCAACCTCATAAATCAACGC+CGG 0.695201 7_1:-21236443 None:intergenic
GCTAAGGAAAGTGTCCGAAG+AGG 0.695446 7_1:+21237347 Msa1013880:CDS
TCGACAGGTGATATTTGGTG+CGG 0.696911 7_1:-21243008 None:intergenic
TTCACATATTATCCGCACAG+TGG 0.732061 7_1:+21243193 Msa1013880:CDS
ATGGTTCTTCTCAAGCAGTG+CGG 0.747276 7_1:+21240272 Msa1013880:CDS
ACTTGTGAAGAACTTACGGG+AGG 0.765515 7_1:+21237811 Msa1013880:CDS
GCAAAAGGGTTAGTTCACTG+GGG 0.793022 7_1:-21239592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATTATCACATAAAA+GGG - chr7_1:21239211-21239230 None:intergenic 10.0%
!!! AAAGGATATTATTTATTTTA+TGG + chr7_1:21240118-21240137 Msa1013880:intron 10.0%
!! TAATAATAAATATAGTCTAT+AGG - chr7_1:21240865-21240884 None:intergenic 10.0%
!!! AAATTTCATGATCAATTTTT+TGG - chr7_1:21238229-21238248 None:intergenic 15.0%
!! TTGTATAAGTGATAAAATAA+AGG - chr7_1:21238603-21238622 None:intergenic 15.0%
!! CAATAAAATTATCACATAAA+AGG - chr7_1:21239212-21239231 None:intergenic 15.0%
!! AATGAATTAAATCTATGATT+TGG - chr7_1:21239373-21239392 None:intergenic 15.0%
!! TACAAATTCCAAAAAAAATT+TGG + chr7_1:21239904-21239923 Msa1013880:intron 15.0%
!! ATGTAAGAAAATATGAATTT+GGG - chr7_1:21239963-21239982 None:intergenic 15.0%
!!! TATTTGGTGAAAATAATTTA+AGG + chr7_1:21240692-21240711 Msa1013880:intron 15.0%
!! GTTATTATTCTCTTAAATTA+CGG + chr7_1:21240794-21240813 Msa1013880:intron 15.0%
!! GACTATATTTATTATTAAGT+TGG + chr7_1:21240868-21240887 Msa1013880:intron 15.0%
!! AACAAAAAAAAAAACACAAA+CGG + chr7_1:21241504-21241523 Msa1013880:intron 15.0%
!! ATGTATAAATAAAAGTAAGA+GGG + chr7_1:21242349-21242368 Msa1013880:intron 15.0%
!! AACAAATTAATACAGAAAAA+AGG - chr7_1:21244334-21244353 None:intergenic 15.0%
!!! TATGATTTTTTTGTGTAATG+TGG + chr7_1:21236715-21236734 Msa1013880:intron 20.0%
!! AAACAAATCAAAGTTTCAAA+TGG - chr7_1:21236871-21236890 None:intergenic 20.0%
!!! CTTTGAACTATGTATATTTT+TGG + chr7_1:21237014-21237033 Msa1013880:intron 20.0%
!!! TTACAAGTAAAAGCATTTTT+AGG + chr7_1:21237444-21237463 Msa1013880:CDS 20.0%
!!! TACAAGTAAAAGCATTTTTA+GGG + chr7_1:21237445-21237464 Msa1013880:CDS 20.0%
!! GTGAAAAAGAAATCTTTATA+TGG - chr7_1:21237873-21237892 None:intergenic 20.0%
!! TATATAAAAAAATGTCCTAG+AGG - chr7_1:21238178-21238197 None:intergenic 20.0%
!! AAAACTAATTTAGCATACTA+TGG - chr7_1:21238305-21238324 None:intergenic 20.0%
!!! ACAAATCAATTTTACATGAT+TGG + chr7_1:21238619-21238638 Msa1013880:intron 20.0%
!! CTTCAATTCTTGTATATTAA+TGG + chr7_1:21238708-21238727 Msa1013880:intron 20.0%
!!! TTTGAAATAATGACATTAAG+AGG - chr7_1:21238848-21238867 None:intergenic 20.0%
!!! ATCTATGATTTGGATAATAA+AGG - chr7_1:21239363-21239382 None:intergenic 20.0%
!!! AAATGTTTTAAAATGCCATA+TGG - chr7_1:21239801-21239820 None:intergenic 20.0%
!!! TATGGCATTTTAAAACATTT+AGG + chr7_1:21239801-21239820 Msa1013880:intron 20.0%
!!! TTTTAGTGTGAATAATATTC+CGG + chr7_1:21239869-21239888 Msa1013880:intron 20.0%
!!! TTTTTTGGAATTTGTAAACT+TGG - chr7_1:21239900-21239919 None:intergenic 20.0%
!! AAATTCCAAAAAAAATTTGG+TGG + chr7_1:21239907-21239926 Msa1013880:intron 20.0%
!! CATGTAAGAAAATATGAATT+TGG - chr7_1:21239964-21239983 None:intergenic 20.0%
!!! CCTTTTTTTTTTTCAATCAA+AGG - chr7_1:21240032-21240051 None:intergenic 20.0%
!! CCTTTGATTGAAAAAAAAAA+AGG + chr7_1:21240029-21240048 Msa1013880:intron 20.0%
!! TGATTGAAAAAAAAAAAGGA+AGG + chr7_1:21240033-21240052 Msa1013880:intron 20.0%
!!! CTCAATAGTTTCAATTTTAA+TGG + chr7_1:21240069-21240088 Msa1013880:intron 20.0%
!!! ACATGTCTAGAAATTTTTTA+CGG + chr7_1:21240410-21240429 Msa1013880:intron 20.0%
!!! TAACATTAACTTGTATATGA+AGG + chr7_1:21240649-21240668 Msa1013880:intron 20.0%
!!! TATTATTAAGTTGGATTTAC+TGG + chr7_1:21240877-21240896 Msa1013880:intron 20.0%
!! AAGATGAAAAATCTATATAC+AGG - chr7_1:21241019-21241038 None:intergenic 20.0%
!! AACAAAATTGTATAAAGTGA+GGG - chr7_1:21241882-21241901 None:intergenic 20.0%
!!! ACTTTATACAATTTTGTTCT+CGG + chr7_1:21241884-21241903 Msa1013880:intron 20.0%
!! TATAAGAACTACAAAATGTA+AGG - chr7_1:21242163-21242182 None:intergenic 20.0%
!!! ACTTTTATTTATACATGTCT+AGG - chr7_1:21242345-21242364 None:intergenic 20.0%
!! CATGTATAAATAAAAGTAAG+AGG + chr7_1:21242348-21242367 Msa1013880:intron 20.0%
!! TGTATAAATAAAAGTAAGAG+GGG + chr7_1:21242350-21242369 Msa1013880:intron 20.0%
!! TTAAATAGTTGTACTATTCA+AGG + chr7_1:21242656-21242675 Msa1013880:intron 20.0%
!! TGTATAATAAAGAGATAATG+TGG + chr7_1:21243383-21243402 Msa1013880:intron 20.0%
!!! AAATAAGTTGAAAACAACAT+AGG + chr7_1:21243467-21243486 Msa1013880:intron 20.0%
!!! TGTTTTTTTTCTCTTCTTTT+GGG + chr7_1:21244360-21244379 Msa1013880:three_prime_UTR 20.0%
!!! CTAATTTGTATAAGAAAAGA+GGG - chr7_1:21244420-21244439 None:intergenic 20.0%
!!! TCTAATTTGTATAAGAAAAG+AGG - chr7_1:21244421-21244440 None:intergenic 20.0%
!!! TGTTTGAAATGTCAATTTTT+TGG + chr7_1:21244584-21244603 Msa1013880:three_prime_UTR 20.0%
! TGGGATTAATATGTTGTATT+TGG + chr7_1:21236463-21236482 Msa1013880:CDS 25.0%
! ATTTGTTTCAATGTTACGAT+TGG + chr7_1:21236676-21236695 Msa1013880:intron 25.0%
! ATAAATTCCGACAACAAATA+TGG - chr7_1:21236780-21236799 None:intergenic 25.0%
! TATCATTTCCTAAATTGTGA+AGG + chr7_1:21236911-21236930 Msa1013880:intron 25.0%
! AAAATAAGCCTTCACAATTT+AGG - chr7_1:21236922-21236941 None:intergenic 25.0%
!! TAAATTGTGAAGGCTTATTT+TGG + chr7_1:21236921-21236940 Msa1013880:intron 25.0%
!! CATTTATGTTTTGTCATTAG+TGG + chr7_1:21237066-21237085 Msa1013880:intron 25.0%
! ATCTAGTCTCATTCAAAATT+TGG - chr7_1:21237772-21237791 None:intergenic 25.0%
! CTGGTATTATATGAATTCAT+TGG + chr7_1:21238073-21238092 Msa1013880:intron 25.0%
! TATCTTGCAAGTTCAAAAAA+AGG - chr7_1:21238145-21238164 None:intergenic 25.0%
!! AAATATTTTATGAGTCCTCT+AGG + chr7_1:21238340-21238359 Msa1013880:intron 25.0%
!! AATTTTGTATAGAACCTCAA+GGG + chr7_1:21238378-21238397 Msa1013880:intron 25.0%
!! AAACGAACAGAAATTTTCTT+TGG - chr7_1:21238470-21238489 None:intergenic 25.0%
! GATAAGTTTCTTAACATAGA+TGG + chr7_1:21238502-21238521 Msa1013880:intron 25.0%
! AGCAATGAACAAATGTATAA+GGG - chr7_1:21238579-21238598 None:intergenic 25.0%
! AAGCAATGAACAAATGTATA+AGG - chr7_1:21238580-21238599 None:intergenic 25.0%
! TATAAAAGTTCAAGTGTTTG+AGG - chr7_1:21238650-21238669 None:intergenic 25.0%
! CATTATTTCAAATATTCGCA+AGG + chr7_1:21238856-21238875 Msa1013880:CDS 25.0%
! TGATTCTTTGCAATATCAAA+CGG - chr7_1:21239060-21239079 None:intergenic 25.0%
!!! TTAATTTGTGATGGCTAAAT+GGG - chr7_1:21239484-21239503 None:intergenic 25.0%
!!! ATTGAACAGTTAATTTGTGA+TGG - chr7_1:21239493-21239512 None:intergenic 25.0%
!! ATACTTCGTTCTCAATTTTT+AGG + chr7_1:21239772-21239791 Msa1013880:intron 25.0%
!! TACTTCGTTCTCAATTTTTA+GGG + chr7_1:21239773-21239792 Msa1013880:intron 25.0%
!!! ATTTGTAAACTTGGTTTTAC+CGG - chr7_1:21239891-21239910 None:intergenic 25.0%
!!! AAGTACCACCAAATTTTTTT+TGG - chr7_1:21239915-21239934 None:intergenic 25.0%
! GGACAAAAGAAAAATAATCA+AGG - chr7_1:21240011-21240030 None:intergenic 25.0%
! AAGATTATGTAGATTGACAA+TGG + chr7_1:21240093-21240112 Msa1013880:intron 25.0%
! ATTACAATTGAAAATGCTTC+AGG + chr7_1:21240174-21240193 Msa1013880:intron 25.0%
! ATCTGGTGCATTATATTATA+TGG + chr7_1:21240249-21240268 Msa1013880:CDS 25.0%
! TTCTAGACATGTAAAACAAA+AGG - chr7_1:21240402-21240421 None:intergenic 25.0%
!!! CATGTCTAGAAATTTTTTAC+GGG + chr7_1:21240411-21240430 Msa1013880:intron 25.0%
! TCATACGTCCAAAAATATTA+GGG - chr7_1:21240479-21240498 None:intergenic 25.0%
! AGCAAAACCAACTAAATAAA+TGG - chr7_1:21240568-21240587 None:intergenic 25.0%
!!! TTTATTTAGTTGGTTTTGCT+TGG + chr7_1:21240568-21240587 Msa1013880:intron 25.0%
! AGGATGTAGAAAAACTAATA+TGG + chr7_1:21240712-21240731 Msa1013880:intron 25.0%
! ATTTGAAGAAGTCTAACAAA+AGG + chr7_1:21240924-21240943 Msa1013880:intron 25.0%
! TTTGAAGAAGTCTAACAAAA+GGG + chr7_1:21240925-21240944 Msa1013880:intron 25.0%
! AAGTTCATGCATATCTTAAA+AGG + chr7_1:21241101-21241120 Msa1013880:intron 25.0%
!! AGGAAATATGCCAAATTTTT+AGG + chr7_1:21241121-21241140 Msa1013880:intron 25.0%
!! ACATCTTTTGCCTAAAAATT+TGG - chr7_1:21241134-21241153 None:intergenic 25.0%
!!! ATAATTGTCAGGTATTGAAA+TGG - chr7_1:21241232-21241251 None:intergenic 25.0%
! AAAAAAAACACAAACGGATA+TGG + chr7_1:21241510-21241529 Msa1013880:intron 25.0%
!! ATTATGGAAGTTTTTGCAAA+AGG + chr7_1:21241560-21241579 Msa1013880:intron 25.0%
!!! TTAGTTAGTTATGTTTTGAG+AGG + chr7_1:21241672-21241691 Msa1013880:intron 25.0%
!!! TAGTTAGTTATGTTTTGAGA+GGG + chr7_1:21241673-21241692 Msa1013880:intron 25.0%
! CCAAAGAATATAACAGTAAA+AGG - chr7_1:21241805-21241824 None:intergenic 25.0%
!! CCTTTTACTGTTATATTCTT+TGG + chr7_1:21241802-21241821 Msa1013880:intron 25.0%
!! ATATTCTTTGGTTTCTTTCT+AGG + chr7_1:21241814-21241833 Msa1013880:intron 25.0%
!! TATTCTTTGGTTTCTTTCTA+GGG + chr7_1:21241815-21241834 Msa1013880:intron 25.0%
! GAACAAAATTGTATAAAGTG+AGG - chr7_1:21241883-21241902 None:intergenic 25.0%
!! CTTTATACAATTTTGTTCTC+GGG + chr7_1:21241885-21241904 Msa1013880:intron 25.0%
!! TCTTACAAATGATGGAATTA+GGG + chr7_1:21241960-21241979 Msa1013880:intron 25.0%
!! GTGCATCATGTTATTTAAAA+TGG - chr7_1:21241994-21242013 None:intergenic 25.0%
!! TTCTAACTTGTCTTCATTAT+CGG - chr7_1:21242227-21242246 None:intergenic 25.0%
! TAACAAGATATAACAAAAGC+AGG - chr7_1:21242281-21242300 None:intergenic 25.0%
! GTATAAATAAAAGTAAGAGG+GGG + chr7_1:21242351-21242370 Msa1013880:intron 25.0%
! TTAGACAAAAGAAAAGATAG+TGG - chr7_1:21242476-21242495 None:intergenic 25.0%
! CTAAGATATGTTATATAGTC+CGG - chr7_1:21242546-21242565 None:intergenic 25.0%
!! TCAGTCAATGGAATTTTATA+AGG - chr7_1:21242978-21242997 None:intergenic 25.0%
! TAATATGTGAACAAACTTTG+TGG - chr7_1:21243184-21243203 None:intergenic 25.0%
! AAGAACTTGTGTAAAAGTTT+GGG - chr7_1:21243530-21243549 None:intergenic 25.0%
! TAAGAACTTGTGTAAAAGTT+TGG - chr7_1:21243531-21243550 None:intergenic 25.0%
!! TTTTCCTGAAACAGTTAATA+TGG + chr7_1:21243671-21243690 Msa1013880:intron 25.0%
! TAACATAGGATAATAAGCAA+TGG + chr7_1:21243722-21243741 Msa1013880:intron 25.0%
! AAATAGTTAGTTAACTTCAG+TGG - chr7_1:21244310-21244329 None:intergenic 25.0%
!!! GTGTTTTTTTTCTCTTCTTT+TGG + chr7_1:21244359-21244378 Msa1013880:three_prime_UTR 25.0%
!!! GTTTTTTTTCTCTTCTTTTG+GGG + chr7_1:21244361-21244380 Msa1013880:three_prime_UTR 25.0%
! TTTCCTGAAAAATTTGGAAA+GGG - chr7_1:21244504-21244523 None:intergenic 25.0%
!! CTTCTATGGTTGATTTTGTT+TGG + chr7_1:21236174-21236193 Msa1013880:exon 30.0%
!! ATTTTGTTTGGAAGAAACGT+AGG + chr7_1:21236186-21236205 Msa1013880:CDS 30.0%
!! TTTTGTTTGGAAGAAACGTA+GGG + chr7_1:21236187-21236206 Msa1013880:CDS 30.0%
! TATTGCTATTCTTACACTGT+GGG + chr7_1:21236529-21236548 Msa1013880:CDS 30.0%
!! ACATCAACCATATTTGTTGT+CGG + chr7_1:21236770-21236789 Msa1013880:intron 30.0%
GTTTCAAATGGTAATTACAG+TGG - chr7_1:21236859-21236878 None:intergenic 30.0%
TGACACAGTTCATAATTCAT+AGG - chr7_1:21236947-21236966 None:intergenic 30.0%
TCTGTATCTTGTGATACTTT+CGG + chr7_1:21237129-21237148 Msa1013880:intron 30.0%
!! GTCTATAAATGACTTGTTGT+AGG + chr7_1:21237214-21237233 Msa1013880:intron 30.0%
!!! AAGTAAAAGCATTTTTAGGG+AGG + chr7_1:21237448-21237467 Msa1013880:CDS 30.0%
TATGCTGCATATTTGATACT+AGG + chr7_1:21237708-21237727 Msa1013880:CDS 30.0%
ATGCTGCATATTTGATACTA+GGG + chr7_1:21237709-21237728 Msa1013880:CDS 30.0%
CAATGGAAAAAGCTTAAGTA+GGG - chr7_1:21237996-21238015 None:intergenic 30.0%
ACAATGGAAAAAGCTTAAGT+AGG - chr7_1:21237997-21238016 None:intergenic 30.0%
!! TACTTAAGCTTTTTCCATTG+TGG + chr7_1:21237996-21238015 Msa1013880:intron 30.0%
! AGTTTCATTGTCAGTTTTCT+TGG - chr7_1:21238050-21238069 None:intergenic 30.0%
ATAACCCTCAATTAAGACAT+CGG + chr7_1:21238195-21238214 Msa1013880:intron 30.0%
ATAACCGATGTCTTAATTGA+GGG - chr7_1:21238202-21238221 None:intergenic 30.0%
TATAACCGATGTCTTAATTG+AGG - chr7_1:21238203-21238222 None:intergenic 30.0%
ACTAATTTAGCATACTATGG+AGG - chr7_1:21238302-21238321 None:intergenic 30.0%
! GAATTTTGTATAGAACCTCA+AGG + chr7_1:21238377-21238396 Msa1013880:intron 30.0%
GCAATGAACAAATGTATAAG+GGG - chr7_1:21238578-21238597 None:intergenic 30.0%
ATATACAAGAATTGAAGTCC+AGG - chr7_1:21238705-21238724 None:intergenic 30.0%
GGTTAATACACCAAGAATAT+TGG + chr7_1:21238745-21238764 Msa1013880:intron 30.0%
!! AACTCTATTTGTTGTATCTG+CGG - chr7_1:21238903-21238922 None:intergenic 30.0%
AAATAGAGTTCAAGATGTAC+AGG + chr7_1:21238913-21238932 Msa1013880:CDS 30.0%
TCTTATATCTGCTCAAAGAT+TGG + chr7_1:21238940-21238959 Msa1013880:CDS 30.0%
CTTATATCTGCTCAAAGATT+GGG + chr7_1:21238941-21238960 Msa1013880:CDS 30.0%
CTAAAGAACTTGAAGAGTTT+AGG + chr7_1:21238996-21239015 Msa1013880:CDS 30.0%
CAAAGAATCAAATATGCTTC+AGG + chr7_1:21239070-21239089 Msa1013880:CDS 30.0%
TAATATTCGTACCTACTATC+AGG - chr7_1:21239100-21239119 None:intergenic 30.0%
CACATGAATGAAATAAAGAC+CGG - chr7_1:21239163-21239182 None:intergenic 30.0%
TTACAGCTAAAATTTCGCAA+TGG - chr7_1:21239251-21239270 None:intergenic 30.0%
!!! TTGCGAAATTTTAGCTGTAA+TGG + chr7_1:21239251-21239270 Msa1013880:intron 30.0%
! ATTATTATTACCTTTTCCCC+AGG + chr7_1:21239426-21239445 Msa1013880:intron 30.0%
!! GTTAATTTGTGATGGCTAAA+TGG - chr7_1:21239485-21239504 None:intergenic 30.0%
!!! ACAAAGCTATTTTAGAGCTA+TGG + chr7_1:21239561-21239580 Msa1013880:CDS 30.0%
ATTTAGCAGATTCAAGTGAT+GGG + chr7_1:21239708-21239727 Msa1013880:CDS 30.0%
AACGAAGTATATAATTGAGG+AGG - chr7_1:21239762-21239781 None:intergenic 30.0%
GAGAACGAAGTATATAATTG+AGG - chr7_1:21239765-21239784 None:intergenic 30.0%
!!! TCAATTTTTAGGGTTCCATA+TGG + chr7_1:21239783-21239802 Msa1013880:intron 30.0%
GGTGCATTATATTATATGGA+TGG + chr7_1:21240253-21240272 Msa1013880:CDS 30.0%
CAAAATAGCTATCTCAAACA+GGG - chr7_1:21240353-21240372 None:intergenic 30.0%
! ATTTTGCATTTGCATCTACT+TGG + chr7_1:21240367-21240386 Msa1013880:intron 30.0%
GTCATACGTCCAAAAATATT+AGG - chr7_1:21240480-21240499 None:intergenic 30.0%
! ATTAGCCTGGAAAAAACTTT+GGG - chr7_1:21240515-21240534 None:intergenic 30.0%
CAACTAAATAAATGGTCTAG+AGG - chr7_1:21240560-21240579 None:intergenic 30.0%
CTCTAGACCATTTATTTAGT+TGG + chr7_1:21240558-21240577 Msa1013880:intron 30.0%
AGAAAAAACCCAAACTGATT+AGG + chr7_1:21240758-21240777 Msa1013880:intron 30.0%
GAAAAAACCCAAACTGATTA+GGG + chr7_1:21240759-21240778 Msa1013880:intron 30.0%
!! GACAACTTGTTCATTTTTGT+AGG + chr7_1:21240982-21241001 Msa1013880:intron 30.0%
! AATAGCTCCTTATGTTTTGT+TGG + chr7_1:21241054-21241073 Msa1013880:intron 30.0%
!!! AAACCTTCAGACTAGTTTTT+AGG + chr7_1:21241179-21241198 Msa1013880:intron 30.0%
GTATTGAAATGGAATTGCTT+TGG - chr7_1:21241221-21241240 None:intergenic 30.0%
TAGCTGAGAAAATAATTGTC+AGG - chr7_1:21241243-21241262 None:intergenic 30.0%
! TGACAATTATTTTCTCAGCT+AGG + chr7_1:21241242-21241261 Msa1013880:intron 30.0%
! GACAATTATTTTCTCAGCTA+GGG + chr7_1:21241243-21241262 Msa1013880:intron 30.0%
! ACAATTATTTTCTCAGCTAG+GGG + chr7_1:21241244-21241263 Msa1013880:intron 30.0%
! CAGAGGTAAAAGAGTATAAA+TGG - chr7_1:21241312-21241331 None:intergenic 30.0%
!! TAATTTGTTCGTAAAAGCAG+AGG - chr7_1:21241329-21241348 None:intergenic 30.0%
TTAGAGAAAAGAATGTGACA+AGG + chr7_1:21241440-21241459 Msa1013880:intron 30.0%
TGGAAAATGATGTAAAACTC+TGG + chr7_1:21241530-21241549 Msa1013880:intron 30.0%
AGGAAAAGAATATAGAGAAG+TGG + chr7_1:21241710-21241729 Msa1013880:intron 30.0%
AATATAGAGAAGTGGTATCA+TGG + chr7_1:21241718-21241737 Msa1013880:intron 30.0%
ATATAGAGAAGTGGTATCAT+GGG + chr7_1:21241719-21241738 Msa1013880:intron 30.0%
AAACTTCTGATGAATCTGAT+AGG - chr7_1:21241913-21241932 None:intergenic 30.0%
! GTCTTACAAATGATGGAATT+AGG + chr7_1:21241959-21241978 Msa1013880:intron 30.0%
!! GGTAACATTATCTTTAGAGT+TGG - chr7_1:21242035-21242054 None:intergenic 30.0%
GATAATGAAGACAAGTTAGA+AGG + chr7_1:21242226-21242245 Msa1013880:intron 30.0%
GGTTGCAAATTTGTGATATA+TGG + chr7_1:21242247-21242266 Msa1013880:intron 30.0%
CTAGTGTACACTATTAACTT+GGG - chr7_1:21242318-21242337 None:intergenic 30.0%
ACAAATTCTGTTAACCGTTT+CGG + chr7_1:21242395-21242414 Msa1013880:intron 30.0%
AGTGAGTATTATTGATCAAG+GGG - chr7_1:21242453-21242472 None:intergenic 30.0%
GAGTGAGTATTATTGATCAA+GGG - chr7_1:21242454-21242473 None:intergenic 30.0%
! GTGTTGTATTACCCATTTTA+TGG + chr7_1:21242837-21242856 Msa1013880:CDS 30.0%
GTAGCTGTCTTAAAATTTAG+CGG + chr7_1:21243593-21243612 Msa1013880:intron 30.0%
!! GAGTCATTTTCTCAAACTTA+AGG - chr7_1:21243699-21243718 None:intergenic 30.0%
GAAAATGACTCAGATAACAT+AGG + chr7_1:21243708-21243727 Msa1013880:intron 30.0%
TAATAAGCAATGGACAAAGT+AGG + chr7_1:21243732-21243751 Msa1013880:intron 30.0%
AATAAGCAATGGACAAAGTA+GGG + chr7_1:21243733-21243752 Msa1013880:intron 30.0%
AAGTGAAGTAAGTAGAAATG+TGG + chr7_1:21243876-21243895 Msa1013880:CDS 30.0%
AGTAAGTAGAAATGTGGATT+TGG + chr7_1:21243882-21243901 Msa1013880:CDS 30.0%
GTAAGTAGAAATGTGGATTT+GGG + chr7_1:21243883-21243902 Msa1013880:CDS 30.0%
ATCTGATGCATCTATTACTA+AGG + chr7_1:21243948-21243967 Msa1013880:CDS 30.0%
CATCTATTACTAAGGAGATT+GGG + chr7_1:21243956-21243975 Msa1013880:CDS 30.0%
CTATCCTTTCCATTGATATT+CGG - chr7_1:21244074-21244093 None:intergenic 30.0%
GATGAAGATGAGAAAAAGAA+GGG + chr7_1:21244186-21244205 Msa1013880:CDS 30.0%
! GTTAATTTGGATAGAGTTGA+AGG - chr7_1:21244213-21244232 None:intergenic 30.0%
AAAAGAATACACTCAGATAC+CGG - chr7_1:21244473-21244492 None:intergenic 30.0%
! ATTCCCTTTCCAAATTTTTC+AGG + chr7_1:21244498-21244517 Msa1013880:three_prime_UTR 30.0%
CTTTCCTGAAAAATTTGGAA+AGG - chr7_1:21244505-21244524 None:intergenic 30.0%
!! TTTTGCCGGTTGAGAATTTT+CGG + chr7_1:21236231-21236250 Msa1013880:CDS 35.0%
TGTGTTTCCGGTTGTTTATT+CGG + chr7_1:21236259-21236278 Msa1013880:CDS 35.0%
GCTTTAACCGAATAAACAAC+CGG - chr7_1:21236269-21236288 None:intergenic 35.0%
TGATGCTAATGCTGAGAAAT+TGG + chr7_1:21236364-21236383 Msa1013880:CDS 35.0%
! TGAGAAATTGGTTGGTGTTT+CGG + chr7_1:21236376-21236395 Msa1013880:CDS 35.0%
TCCAACGATGAAACCAAAAA+CGG - chr7_1:21236422-21236441 None:intergenic 35.0%
! CTATTGCTATTCTTACACTG+TGG + chr7_1:21236528-21236547 Msa1013880:CDS 35.0%
!! TGCTAGAGAGAGTATTGTTA+GGG + chr7_1:21236571-21236590 Msa1013880:CDS 35.0%
AAGATCAAGCAGATGAAGAT+TGG - chr7_1:21236606-21236625 None:intergenic 35.0%
TCTGCTTGATCTTAATATGC+AGG + chr7_1:21236613-21236632 Msa1013880:CDS 35.0%
! GTTTATTTCTTTACCTCACC+AGG + chr7_1:21236887-21236906 Msa1013880:intron 35.0%
CAATTTAGGAAATGATAGCC+TGG - chr7_1:21236908-21236927 None:intergenic 35.0%
AGCTTAACTTACTAGCACAA+AGG - chr7_1:21236996-21237015 None:intergenic 35.0%
GGTTTGTCTAAAAGTAGTAC+TGG + chr7_1:21237150-21237169 Msa1013880:intron 35.0%
! TTGTGTGGATCTATTTGCTA+AGG + chr7_1:21237331-21237350 Msa1013880:CDS 35.0%
TTTGCCTGAACAGAAAAACT+CGG + chr7_1:21237517-21237536 Msa1013880:CDS 35.0%
CTGGTTATGGTGCATTAAAT+TGG + chr7_1:21237579-21237598 Msa1013880:CDS 35.0%
TCACAATCCCATTTAACACA+AGG - chr7_1:21237641-21237660 None:intergenic 35.0%
TGTGTTAAATGGGATTGTGA+TGG + chr7_1:21237641-21237660 Msa1013880:CDS 35.0%
TGCTGCATATTTGATACTAG+GGG + chr7_1:21237710-21237729 Msa1013880:CDS 35.0%
GTGAACTTGTGAAGAACTTA+CGG + chr7_1:21237807-21237826 Msa1013880:CDS 35.0%
TGAACTTGTGAAGAACTTAC+GGG + chr7_1:21237808-21237827 Msa1013880:CDS 35.0%
CTTAAGTAGGGTAAAGTTGA+AGG - chr7_1:21237984-21238003 None:intergenic 35.0%
CTTAATAGCAATTGCCACAA+TGG - chr7_1:21238013-21238032 None:intergenic 35.0%
AACTGACAATGAAACTATGC+TGG + chr7_1:21238054-21238073 Msa1013880:intron 35.0%
! AGATATTTTACGAGTCCTCT+AGG + chr7_1:21238160-21238179 Msa1013880:intron 35.0%
TAATTCAAACATTGCCCTTG+AGG - chr7_1:21238395-21238414 None:intergenic 35.0%
!! CTGTTCGTTTTTGATTGAAG+AGG + chr7_1:21238480-21238499 Msa1013880:intron 35.0%
TGTCTTGCATACTCAGATAT+AGG + chr7_1:21238674-21238693 Msa1013880:intron 35.0%
TTAATGGCTGTGAATGTAAC+AGG + chr7_1:21238724-21238743 Msa1013880:intron 35.0%
AATATTGGCCCGACTTATAT+GGG + chr7_1:21238760-21238779 Msa1013880:CDS 35.0%
GCACATAGATATAGAAGGAT+TGG + chr7_1:21238793-21238812 Msa1013880:CDS 35.0%
TGACATTAAGAGGATCATCT+GGG - chr7_1:21238838-21238857 None:intergenic 35.0%
ATGACATTAAGAGGATCATC+TGG - chr7_1:21238839-21238858 None:intergenic 35.0%
CTGTCTATTCATATTGTCAC+CGG + chr7_1:21239141-21239160 Msa1013880:intron 35.0%
!!! AATTTTAGCTGTAATGGTGC+TGG + chr7_1:21239257-21239276 Msa1013880:intron 35.0%
AGAGCAGGAATAAAATGACA+GGG - chr7_1:21239296-21239315 None:intergenic 35.0%
TAGAGCAGGAATAAAATGAC+AGG - chr7_1:21239297-21239316 None:intergenic 35.0%
AACTCCTTTAGTCAGCAAAA+GGG - chr7_1:21239609-21239628 None:intergenic 35.0%
! AGTTGATGCTACTTCACTTA+AGG + chr7_1:21239625-21239644 Msa1013880:CDS 35.0%
! GTTAAAGTATTTGCAGTAGG+AGG - chr7_1:21239653-21239672 None:intergenic 35.0%
! CCAGTTAAAGTATTTGCAGT+AGG - chr7_1:21239656-21239675 None:intergenic 35.0%
CCTACTGCAAATACTTTAAC+TGG + chr7_1:21239653-21239672 Msa1013880:CDS 35.0%
TGATAACCTTCAACATAGCA+AGG - chr7_1:21239689-21239708 None:intergenic 35.0%
CATTTAGCAGATTCAAGTGA+TGG + chr7_1:21239707-21239726 Msa1013880:CDS 35.0%
GAGGATAACTCTGCATTTAA+AGG + chr7_1:21239730-21239749 Msa1013880:CDS 35.0%
TGGTGGTACTTATTCTATTC+AGG + chr7_1:21239924-21239943 Msa1013880:intron 35.0%
TGTAGATTGACAATGGACAA+AGG + chr7_1:21240100-21240119 Msa1013880:intron 35.0%
GCAAAATAGCTATCTCAAAC+AGG - chr7_1:21240354-21240373 None:intergenic 35.0%
ATATTAGGGCTACAGCATAT+GGG - chr7_1:21240465-21240484 None:intergenic 35.0%
AATATTAGGGCTACAGCATA+TGG - chr7_1:21240466-21240485 None:intergenic 35.0%
! TGCTGTAGCCCTAATATTTT+TGG + chr7_1:21240468-21240487 Msa1013880:intron 35.0%
! TTTTTGGACGTATGACAACA+TGG + chr7_1:21240484-21240503 Msa1013880:intron 35.0%
!! GATTAGCCTGGAAAAAACTT+TGG - chr7_1:21240516-21240535 None:intergenic 35.0%
TTAATTACAACAGTGAGCTG+CGG - chr7_1:21240632-21240651 None:intergenic 35.0%
! TGTATATGAAGGAGTGTGTT+TGG + chr7_1:21240660-21240679 Msa1013880:intron 35.0%
! GTATATGAAGGAGTGTGTTT+GGG + chr7_1:21240661-21240680 Msa1013880:intron 35.0%
! TGTTTGGGTTAGGACTTATT+TGG + chr7_1:21240676-21240695 Msa1013880:intron 35.0%
TAAATTACGGAAGTGATTGC+AGG + chr7_1:21240807-21240826 Msa1013880:intron 35.0%
AAGAAGTCTAACAAAAGGGA+AGG + chr7_1:21240929-21240948 Msa1013880:intron 35.0%
AGAAGTCTAACAAAAGGGAA+GGG + chr7_1:21240930-21240949 Msa1013880:intron 35.0%
CCAAACTCCAACAAAACATA+AGG - chr7_1:21241064-21241083 None:intergenic 35.0%
!! CCTTATGTTTTGTTGGAGTT+TGG + chr7_1:21241061-21241080 Msa1013880:intron 35.0%
!! TTTTGTTGGAGTTTGGAATG+TGG + chr7_1:21241068-21241087 Msa1013880:intron 35.0%
! TGTCCTAAAAACTAGTCTGA+AGG - chr7_1:21241185-21241204 None:intergenic 35.0%
!!! AGACTAGTTTTTAGGACAGT+GGG + chr7_1:21241187-21241206 Msa1013880:intron 35.0%
! CAATTATTTTCTCAGCTAGG+GGG + chr7_1:21241245-21241264 Msa1013880:intron 35.0%
ATAAAAAGCTAGTCCAGCAT+AGG + chr7_1:21241354-21241373 Msa1013880:intron 35.0%
TGATGCATAGTAGATTGAAC+TGG + chr7_1:21241399-21241418 Msa1013880:intron 35.0%
ATAGTAGATTGAACTGGACT+AGG + chr7_1:21241405-21241424 Msa1013880:intron 35.0%
!! AAACTCTGGCTCTTGAATTA+TGG + chr7_1:21241544-21241563 Msa1013880:intron 35.0%
GGGTAGTAAATACATTCTGA+TGG - chr7_1:21241608-21241627 None:intergenic 35.0%
TATAGAGAAGTGGTATCATG+GGG + chr7_1:21241720-21241739 Msa1013880:intron 35.0%
CCTCTTCAAACTTAAATAGC+TGG - chr7_1:21241940-21241959 None:intergenic 35.0%
! CCAGCTATTTAAGTTTGAAG+AGG + chr7_1:21241937-21241956 Msa1013880:intron 35.0%
TGAAGAGGTCTTACAAATGA+TGG + chr7_1:21241952-21241971 Msa1013880:intron 35.0%
CCTAGTGTACACTATTAACT+TGG - chr7_1:21242319-21242338 None:intergenic 35.0%
CCAAGTTAATAGTGTACACT+AGG + chr7_1:21242316-21242335 Msa1013880:intron 35.0%
GGAGTGAGTATTATTGATCA+AGG - chr7_1:21242455-21242474 None:intergenic 35.0%
! ACATATCTTAGCAGCCTTTT+AGG + chr7_1:21242555-21242574 Msa1013880:intron 35.0%
ATCAGGTAGTAATGCCTAAA+AGG - chr7_1:21242572-21242591 None:intergenic 35.0%
GAAAAGATAACATCATCACC+AGG - chr7_1:21242749-21242768 None:intergenic 35.0%
!! GGTGATGATGTTATCTTTTC+AGG + chr7_1:21242749-21242768 Msa1013880:intron 35.0%
ATACAACACTTGAACCCAAA+GGG - chr7_1:21242826-21242845 None:intergenic 35.0%
AATACAACACTTGAACCCAA+AGG - chr7_1:21242827-21242846 None:intergenic 35.0%
! TATTACCCATTTTATGGCAG+TGG + chr7_1:21242843-21242862 Msa1013880:CDS 35.0%
AGGTTGACATCTCAAAATCA+CGG - chr7_1:21242958-21242977 None:intergenic 35.0%
AAAACTCGACAGGTGATATT+TGG - chr7_1:21243016-21243035 None:intergenic 35.0%
ACCGGTACATATACATATGA+AGG + chr7_1:21243074-21243093 Msa1013880:CDS 35.0%
CCCTTCATATGTATATGTAC+CGG - chr7_1:21243078-21243097 None:intergenic 35.0%
CCGGTACATATACATATGAA+GGG + chr7_1:21243075-21243094 Msa1013880:CDS 35.0%
ACATATACATATGAAGGGAG+TGG + chr7_1:21243080-21243099 Msa1013880:CDS 35.0%
TGTGAACAAACTTTGTGGAA+TGG - chr7_1:21243179-21243198 None:intergenic 35.0%
GGTACCATATTAACTGTTTC+AGG - chr7_1:21243678-21243697 None:intergenic 35.0%
TAACACAACTGTTCCAGAAT+AGG - chr7_1:21243805-21243824 None:intergenic 35.0%
TGTGTTATGCTGCTAAAACT+TGG + chr7_1:21243818-21243837 Msa1013880:CDS 35.0%
!!! TTCTTGGGGTTGATGATTTT+TGG + chr7_1:21243850-21243869 Msa1013880:CDS 35.0%
GCATCTATTACTAAGGAGAT+TGG + chr7_1:21243955-21243974 Msa1013880:CDS 35.0%
AGGAAGAGGATAAAGAGAAA+AGG + chr7_1:21244154-21244173 Msa1013880:CDS 35.0%
AGAGGATAAAGAGAAAAGGA+AGG + chr7_1:21244158-21244177 Msa1013880:CDS 35.0%
GATAAAGAGAAAAGGAAGGA+CGG + chr7_1:21244162-21244181 Msa1013880:CDS 35.0%
ATAAAGAGAAAAGGAAGGAC+GGG + chr7_1:21244163-21244182 Msa1013880:CDS 35.0%
GGATGAAGATGAGAAAAAGA+AGG + chr7_1:21244185-21244204 Msa1013880:CDS 35.0%
AAGCGCTTTCCTGAAAAATT+TGG - chr7_1:21244510-21244529 None:intergenic 35.0%
!! TTTGCCGGTTGAGAATTTTC+GGG + chr7_1:21236232-21236251 Msa1013880:CDS 40.0%
! TTCGGTTAAAGCTGTTGCTT+CGG + chr7_1:21236277-21236296 Msa1013880:CDS 40.0%
CTTTCGAAGTCTTCTAGTGT+AGG + chr7_1:21236323-21236342 Msa1013880:CDS 40.0%
GCTAATGCTGAGAAATTGGT+TGG + chr7_1:21236368-21236387 Msa1013880:CDS 40.0%
TTCGGATGTGGTTACACATT+TGG + chr7_1:21236394-21236413 Msa1013880:CDS 40.0%
!! TACACATTTGGCTCCGTTTT+TGG + chr7_1:21236406-21236425 Msa1013880:CDS 40.0%
!!! TCCGTTTTTGGTTTCATCGT+TGG + chr7_1:21236418-21236437 Msa1013880:CDS 40.0%
! TTTGGTTTCATCGTTGGAAC+CGG + chr7_1:21236424-21236443 Msa1013880:CDS 40.0%
!! CTGCTAGAGAGAGTATTGTT+AGG + chr7_1:21236570-21236589 Msa1013880:CDS 40.0%
!! TGGTAATTACAGTGGACTGA+CGG - chr7_1:21236851-21236870 None:intergenic 40.0%
TGTAGGTTTCACTCTTCAAG+AGG + chr7_1:21237231-21237250 Msa1013880:intron 40.0%
!!! CTTCAAGAGGCTACTTTTGA+TGG + chr7_1:21237244-21237263 Msa1013880:CDS 40.0%
TTGTAGAACAGCTCTTTGTG+TGG + chr7_1:21237316-21237335 Msa1013880:CDS 40.0%
CACTCTGGCATCTTCAAAAA+GGG - chr7_1:21237405-21237424 None:intergenic 40.0%
TCACTCTGGCATCTTCAAAA+AGG - chr7_1:21237406-21237425 None:intergenic 40.0%
GTTAAGATCATCACTCACTC+TGG - chr7_1:21237420-21237439 None:intergenic 40.0%
! GAGTTTTTCTGTTCAGGCAA+AGG - chr7_1:21237518-21237537 None:intergenic 40.0%
TTGCCTGAACAGAAAAACTC+GGG + chr7_1:21237518-21237537 Msa1013880:CDS 40.0%
TTGGCATATGGAACTGGTTA+TGG + chr7_1:21237566-21237585 Msa1013880:CDS 40.0%
! GACTGAACCTTCTTTAGAAG+TGG + chr7_1:21237601-21237620 Msa1013880:CDS 40.0%
! TGAACCTTCTTTAGAAGTGG+TGG + chr7_1:21237604-21237623 Msa1013880:CDS 40.0%
! ACTTCCACCACTTCTAAAGA+AGG - chr7_1:21237611-21237630 None:intergenic 40.0%
! TAGAAGTGGTGGAAGTTTGT+CGG + chr7_1:21237615-21237634 Msa1013880:CDS 40.0%
! TTTGTCGGCCTTGTGTTAAA+TGG + chr7_1:21237630-21237649 Msa1013880:CDS 40.0%
! TTGTCGGCCTTGTGTTAAAT+GGG + chr7_1:21237631-21237650 Msa1013880:CDS 40.0%
CAAGTAGCAGTCAATTGCAT+AGG - chr7_1:21237672-21237691 None:intergenic 40.0%
GCTACTTGAAGTTGCTTGTT+AGG + chr7_1:21237684-21237703 Msa1013880:CDS 40.0%
TGCATATTTGATACTAGGGG+CGG + chr7_1:21237713-21237732 Msa1013880:CDS 40.0%
GGTGTAAAGAGAGTCAAAGA+TGG + chr7_1:21237734-21237753 Msa1013880:CDS 40.0%
TGCGACCAATAGCATTCAAA+CGG + chr7_1:21237904-21237923 Msa1013880:intron 40.0%
TAGCACCGTTTGAATGCTAT+TGG - chr7_1:21237912-21237931 None:intergenic 40.0%
AATCATTCAGCACACCATGA+AGG - chr7_1:21238117-21238136 None:intergenic 40.0%
CAAAAACACAGATGTCCTAG+AGG - chr7_1:21238358-21238377 None:intergenic 40.0%
AGGGCAATGTTTGAATTAGC+AGG + chr7_1:21238397-21238416 Msa1013880:intron 40.0%
ACTCAGATATAGGTGTTTCC+TGG + chr7_1:21238684-21238703 Msa1013880:intron 40.0%
ATAAGTCGGGCCAATATTCT+TGG - chr7_1:21238758-21238777 None:intergenic 40.0%
GAATATTGGCCCGACTTATA+TGG + chr7_1:21238759-21238778 Msa1013880:CDS 40.0%
TAAGTAACTGTCCAGCTCTA+GGG - chr7_1:21238976-21238995 None:intergenic 40.0%
! AGAGTTTAGGACCAATGCTT+TGG + chr7_1:21239009-21239028 Msa1013880:CDS 40.0%
TACAGAATCAGCCAAAGCAT+TGG - chr7_1:21239023-21239042 None:intergenic 40.0%
TTTGCAATATCAAACGGCAC+TGG - chr7_1:21239054-21239073 None:intergenic 40.0%
! ATTATTACCTTTTCCCCAGG+TGG + chr7_1:21239429-21239448 Msa1013880:intron 40.0%
! TTATTACCTTTTCCCCAGGT+GGG + chr7_1:21239430-21239449 Msa1013880:intron 40.0%
GGATAGAAAGTTGGAAGGTT+TGG + chr7_1:21239535-21239554 Msa1013880:CDS 40.0%
!! AGCAAAAGGGTTAGTTCACT+GGG - chr7_1:21239596-21239615 None:intergenic 40.0%
!! CTAACCCTTTTGCTGACTAA+AGG + chr7_1:21239602-21239621 Msa1013880:CDS 40.0%
CAACTCCTTTAGTCAGCAAA+AGG - chr7_1:21239610-21239629 None:intergenic 40.0%
! AGTGATCCTTGCTATGTTGA+AGG + chr7_1:21239680-21239699 Msa1013880:CDS 40.0%
TAACCGAGCTCGAACTAAAT+CGG + chr7_1:21240206-21240225 Msa1013880:CDS 40.0%
GATGTACGTGTTGGATTATC+TGG + chr7_1:21240232-21240251 Msa1013880:CDS 40.0%
! GTTGCGTAATCTTGTTTCAC+AGG + chr7_1:21240297-21240316 Msa1013880:CDS 40.0%
GAATGGAATACGCAGTTAAG+AGG - chr7_1:21240331-21240350 None:intergenic 40.0%
TAGCTATCTCAAACAGGGAA+TGG - chr7_1:21240348-21240367 None:intergenic 40.0%
TAATTACAACAGTGAGCTGC+GGG - chr7_1:21240631-21240650 None:intergenic 40.0%
ACCCAAACTGATTAGGGTAA+AGG + chr7_1:21240765-21240784 Msa1013880:intron 40.0%
CCCTTTACCCTAATCAGTTT+GGG - chr7_1:21240769-21240788 None:intergenic 40.0%
CCCAAACTGATTAGGGTAAA+GGG + chr7_1:21240766-21240785 Msa1013880:intron 40.0%
CCAAACTGATTAGGGTAAAG+GGG + chr7_1:21240767-21240786 Msa1013880:intron 40.0%
!! CTGTTTTGTGCAATGGACTT+TGG + chr7_1:21240836-21240855 Msa1013880:intron 40.0%
!!! CAGACTAGTTTTTAGGACAG+TGG + chr7_1:21241186-21241205 Msa1013880:intron 40.0%
!!! AGTTTTTAGGACAGTGGGTT+TGG + chr7_1:21241192-21241211 Msa1013880:intron 40.0%
TCCAGCATAGGTTTAATGAG+AGG + chr7_1:21241366-21241385 Msa1013880:intron 40.0%
ACCTCTCATTAAACCTATGC+TGG - chr7_1:21241370-21241389 None:intergenic 40.0%
! TTGAACTGGACTAGGACATT+CGG + chr7_1:21241413-21241432 Msa1013880:intron 40.0%
ACCCATTCAGTACAGTTGAT+GGG - chr7_1:21241629-21241648 None:intergenic 40.0%
AACCCATTCAGTACAGTTGA+TGG - chr7_1:21241630-21241649 None:intergenic 40.0%
ATCAACTGTACTGAATGGGT+TGG + chr7_1:21241629-21241648 Msa1013880:intron 40.0%
AGAGCTACTACTACAAGGAT+GGG - chr7_1:21242056-21242075 None:intergenic 40.0%
AAGAGCTACTACTACAAGGA+TGG - chr7_1:21242057-21242076 None:intergenic 40.0%
GGTTAAGAGCTACTACTACA+AGG - chr7_1:21242061-21242080 None:intergenic 40.0%
AAAGTAAGAGGGGGAAACTA+CGG + chr7_1:21242360-21242379 Msa1013880:intron 40.0%
CTTTATACCGCAATCTGTTC+CGG + chr7_1:21242524-21242543 Msa1013880:intron 40.0%
ATATAGTCCGGAACAGATTG+CGG - chr7_1:21242534-21242553 None:intergenic 40.0%
GGCATTACTACCTGATAAGT+TGG + chr7_1:21242576-21242595 Msa1013880:intron 40.0%
GTAATGAAGCAAACTTGCCA+GGG - chr7_1:21242610-21242629 None:intergenic 40.0%
AGTAATGAAGCAAACTTGCC+AGG - chr7_1:21242611-21242630 None:intergenic 40.0%
AACATCATCACCAGGAACAT+GGG - chr7_1:21242741-21242760 None:intergenic 40.0%
TAACATCATCACCAGGAACA+TGG - chr7_1:21242742-21242761 None:intergenic 40.0%
! AAGGGCACATCTTTCAAAGT+GGG - chr7_1:21242808-21242827 None:intergenic 40.0%
! AAAGGGCACATCTTTCAAAG+TGG - chr7_1:21242809-21242828 None:intergenic 40.0%
! ACTTTGAAAGATGTGCCCTT+TGG + chr7_1:21242808-21242827 Msa1013880:CDS 40.0%
! CTTTGAAAGATGTGCCCTTT+GGG + chr7_1:21242809-21242828 Msa1013880:CDS 40.0%
CAACACCACTGCCATAAAAT+GGG - chr7_1:21242851-21242870 None:intergenic 40.0%
ACAACACCACTGCCATAAAA+TGG - chr7_1:21242852-21242871 None:intergenic 40.0%
!!! TTTTATGGCAGTGGTGTTGT+TGG + chr7_1:21242852-21242871 Msa1013880:CDS 40.0%
TGAGACAGAAGAGAAGCTTA+AGG + chr7_1:21242916-21242935 Msa1013880:CDS 40.0%
AATCACGGGTTCACCTAATT+CGG - chr7_1:21242943-21242962 None:intergenic 40.0%
GGTTGACATCTCAAAATCAC+GGG - chr7_1:21242957-21242976 None:intergenic 40.0%
TCTACAATAGCTGGCAAACT+GGG - chr7_1:21243050-21243069 None:intergenic 40.0%
TTCTACAATAGCTGGCAAAC+TGG - chr7_1:21243051-21243070 None:intergenic 40.0%
CCAGCTATTGTAGAATACAC+CGG + chr7_1:21243056-21243075 Msa1013880:CDS 40.0%
GATTTCAGTCCACTCAAGAA+AGG - chr7_1:21243143-21243162 None:intergenic 40.0%
ACAAACTTTGTGGAATGGCT+TGG - chr7_1:21243174-21243193 None:intergenic 40.0%
TTCACATATTATCCGCACAG+TGG + chr7_1:21243193-21243212 Msa1013880:CDS 40.0%
ATTCCAGGAATGGTACAACA+GGG - chr7_1:21243295-21243314 None:intergenic 40.0%
AATTCCAGGAATGGTACAAC+AGG - chr7_1:21243296-21243315 None:intergenic 40.0%
TACCATTCCTGGAATTACCT+AGG + chr7_1:21243300-21243319 Msa1013880:intron 40.0%
ACCATTCCTGGAATTACCTA+GGG + chr7_1:21243301-21243320 Msa1013880:intron 40.0%
CTTGTGTAAAAGTTTGGGAG+AGG - chr7_1:21243525-21243544 None:intergenic 40.0%
AGGGTCAGCAAATTCATATG+AGG - chr7_1:21243772-21243791 None:intergenic 40.0%
CAGAATAGGACAGAGCAAAA+GGG - chr7_1:21243791-21243810 None:intergenic 40.0%
TATGCTGCTAAAACTTGGCA+TGG + chr7_1:21243823-21243842 Msa1013880:CDS 40.0%
AACCATGATGTGCAAGTTTG+TGG + chr7_1:21243918-21243937 Msa1013880:CDS 40.0%
TACCACAAACTTGCACATCA+TGG - chr7_1:21243923-21243942 None:intergenic 40.0%
TGGTGTGATGATCTAACTGA+TGG + chr7_1:21243994-21244013 Msa1013880:CDS 40.0%
TGTGATGATCTAACTGATGG+TGG + chr7_1:21243997-21244016 Msa1013880:CDS 40.0%
GTGATGATCTAACTGATGGT+GGG + chr7_1:21243998-21244017 Msa1013880:CDS 40.0%
! TGATGATCTAACTGATGGTG+GGG + chr7_1:21243999-21244018 Msa1013880:CDS 40.0%
GCCTGAAGATGAAGTGAAAT+CGG + chr7_1:21244032-21244051 Msa1013880:CDS 40.0%
GACTCCGAATATCAATGGAA+AGG + chr7_1:21244067-21244086 Msa1013880:CDS 40.0%
!! GGAAAGGATAGCCTTGTTAA+AGG + chr7_1:21244083-21244102 Msa1013880:CDS 40.0%
!!! TCATCGGATTTTGGAGTCTT+GGG - chr7_1:21244123-21244142 None:intergenic 40.0%
TAAAGAGAAAAGGAAGGACG+GGG + chr7_1:21244164-21244183 Msa1013880:CDS 40.0%
TCTATCCAAATTAACTGCCG+AGG + chr7_1:21244218-21244237 Msa1013880:CDS 40.0%
! GAAGAAACGTAGGGCGTTAA+TGG + chr7_1:21236196-21236215 Msa1013880:CDS 45.0%
GTAGCCCGAAAATTCTCAAC+CGG - chr7_1:21236239-21236258 None:intergenic 45.0%
!! TTTTCGGGCTACTGTGTTTC+CGG + chr7_1:21236247-21236266 Msa1013880:CDS 45.0%
! TCGGTTAAAGCTGTTGCTTC+GGG + chr7_1:21236278-21236297 Msa1013880:CDS 45.0%
TCGAAGTCTTCTAGTGTAGG+TGG + chr7_1:21236326-21236345 Msa1013880:CDS 45.0%
AAGTCTTCTAGTGTAGGTGG+TGG + chr7_1:21236329-21236348 Msa1013880:CDS 45.0%
AGTCTTCTAGTGTAGGTGGT+GGG + chr7_1:21236330-21236349 Msa1013880:CDS 45.0%
! ATTGGTTGGTGTTTCGGATG+TGG + chr7_1:21236382-21236401 Msa1013880:CDS 45.0%
CCAACCTCATAAATCAACGC+CGG - chr7_1:21236446-21236465 None:intergenic 45.0%
!! CGGCGTTGATTTATGAGGTT+GGG + chr7_1:21236444-21236463 Msa1013880:CDS 45.0%
TTGTATTTGGCTGATGTGCC+TGG + chr7_1:21236476-21236495 Msa1013880:CDS 45.0%
TCTTACACTGTGGGATAGAC+AGG + chr7_1:21236538-21236557 Msa1013880:CDS 45.0%
! GGTTGATGTGATCACAGATG+TGG - chr7_1:21236759-21236778 None:intergenic 45.0%
TAGGAAATGATAGCCTGGTG+AGG - chr7_1:21236903-21236922 None:intergenic 45.0%
! ATGCCCGAGTTTTTCTGTTC+AGG - chr7_1:21237524-21237543 None:intergenic 45.0%
TGAACAGAAAAACTCGGGCA+TGG + chr7_1:21237523-21237542 Msa1013880:CDS 45.0%
! GTCATTGGAGCTTTGGCATA+TGG + chr7_1:21237554-21237573 Msa1013880:CDS 45.0%
AGCAGTCAATTGCATAGGTG+CGG - chr7_1:21237667-21237686 None:intergenic 45.0%
AGTCAAAGATGGAGCTTCTC+AGG + chr7_1:21237745-21237764 Msa1013880:CDS 45.0%
ACTTGTGAAGAACTTACGGG+AGG + chr7_1:21237811-21237830 Msa1013880:CDS 45.0%
! TGGAAGCAGTGCTGAATATG+AGG - chr7_1:21237853-21237872 None:intergenic 45.0%
CACTCAGTTACTCACCTTCA+TGG + chr7_1:21238100-21238119 Msa1013880:intron 45.0%
CGCAATAGCCCATATAAGTC+GGG - chr7_1:21238771-21238790 None:intergenic 45.0%
CCGCAATAGCCCATATAAGT+CGG - chr7_1:21238772-21238791 None:intergenic 45.0%
! CCGACTTATATGGGCTATTG+CGG + chr7_1:21238769-21238788 Msa1013880:CDS 45.0%
GCGGAGCACATAGATATAGA+AGG + chr7_1:21238788-21238807 Msa1013880:CDS 45.0%
GTAAGTAACTGTCCAGCTCT+AGG - chr7_1:21238977-21238996 None:intergenic 45.0%
CTTCAGGTCATCCTGATAGT+AGG + chr7_1:21239086-21239105 Msa1013880:CDS 45.0%
CATTAAGCACGAACTAGAGC+AGG - chr7_1:21239311-21239330 None:intergenic 45.0%
! CTGCTCTAGTTCGTGCTTAA+TGG + chr7_1:21239309-21239328 Msa1013880:intron 45.0%
GCTAAATGGGTAATCACCTC+TGG - chr7_1:21239471-21239490 None:intergenic 45.0%
! TTATGAAGCATCTGCTGCTC+AGG + chr7_1:21239514-21239533 Msa1013880:CDS 45.0%
TGCTGCTCAGGATAGAAAGT+TGG + chr7_1:21239526-21239545 Msa1013880:CDS 45.0%
GCTCAGGATAGAAAGTTGGA+AGG + chr7_1:21239530-21239549 Msa1013880:CDS 45.0%
!! GCAAAAGGGTTAGTTCACTG+GGG - chr7_1:21239595-21239614 None:intergenic 45.0%
!! CAGCAAAAGGGTTAGTTCAC+TGG - chr7_1:21239597-21239616 None:intergenic 45.0%
! TAGCAGATTCAAGTGATGGG+AGG + chr7_1:21239711-21239730 Msa1013880:CDS 45.0%
AACCGAGCTCGAACTAAATC+GGG + chr7_1:21240207-21240226 Msa1013880:CDS 45.0%
ATGGTTCTTCTCAAGCAGTG+CGG + chr7_1:21240272-21240291 Msa1013880:CDS 45.0%
CCTGGAAAAAACTTTGGGCT+AGG - chr7_1:21240510-21240529 None:intergenic 45.0%
!!! CCTAGCCCAAAGTTTTTTCC+AGG + chr7_1:21240507-21240526 Msa1013880:intron 45.0%
! TGAAGGAGTGTGTTTGGGTT+AGG + chr7_1:21240666-21240685 Msa1013880:intron 45.0%
CCCCTTTACCCTAATCAGTT+TGG - chr7_1:21240770-21240789 None:intergenic 45.0%
GAACAAGTTGTCCAATCCAG+TGG - chr7_1:21240974-21240993 None:intergenic 45.0%
ACCCCATCAACTGTACTGAA+TGG + chr7_1:21241624-21241643 Msa1013880:intron 45.0%
! CCCATTCAGTACAGTTGATG+GGG - chr7_1:21241628-21241647 None:intergenic 45.0%
CCCCATCAACTGTACTGAAT+GGG + chr7_1:21241625-21241644 Msa1013880:intron 45.0%
AGAAGTGGTATCATGGGGAA+TGG + chr7_1:21241725-21241744 Msa1013880:intron 45.0%
GAAGTGGTATCATGGGGAAT+GGG + chr7_1:21241726-21241745 Msa1013880:intron 45.0%
AAGTGGTATCATGGGGAATG+GGG + chr7_1:21241727-21241746 Msa1013880:intron 45.0%
! ATGCAGAACCAAGTTTGGTG+GGG - chr7_1:21242203-21242222 None:intergenic 45.0%
CATGCAGAACCAAGTTTGGT+GGG - chr7_1:21242204-21242223 None:intergenic 45.0%
AAGTAAGAGGGGGAAACTAC+GGG + chr7_1:21242361-21242380 Msa1013880:intron 45.0%
CAAGGCAGTTACAACCGAAA+CGG - chr7_1:21242412-21242431 None:intergenic 45.0%
TAACTGCCTTGCAGTTGTGA+AGG + chr7_1:21242421-21242440 Msa1013880:intron 45.0%
AACTGCCTTGCAGTTGTGAA+GGG + chr7_1:21242422-21242441 Msa1013880:intron 45.0%
AATTCCCCTTCACAACTGCA+AGG - chr7_1:21242430-21242449 None:intergenic 45.0%
GGTCTACACTCCAACTTATC+AGG - chr7_1:21242589-21242608 None:intergenic 45.0%
! ATAAGTTGGAGTGTAGACCC+TGG + chr7_1:21242590-21242609 Msa1013880:intron 45.0%
!! GGTGTTGTTGGAGACTATGA+AGG + chr7_1:21242864-21242883 Msa1013880:CDS 45.0%
CTATGAAGGTGACTATGCTG+AGG + chr7_1:21242878-21242897 Msa1013880:CDS 45.0%
CTCTTCTGTCTCATGACTTG+AGG - chr7_1:21242909-21242928 None:intergenic 45.0%
AGAAGCTTAAGGCCCGAATT+AGG + chr7_1:21242927-21242946 Msa1013880:CDS 45.0%
ATCACGGGTTCACCTAATTC+GGG - chr7_1:21242942-21242961 None:intergenic 45.0%
GGTAGAAGTAGCTCAGTCAA+TGG - chr7_1:21242990-21243009 None:intergenic 45.0%
! TCGACAGGTGATATTTGGTG+CGG - chr7_1:21243011-21243030 None:intergenic 45.0%
CCGGTGTATTCTACAATAGC+TGG - chr7_1:21243059-21243078 None:intergenic 45.0%
ATATGAAGGGAGTGGCTTTC+AGG + chr7_1:21243088-21243107 Msa1013880:CDS 45.0%
ATATTATCCGCACAGTGGCA+GGG + chr7_1:21243198-21243217 Msa1013880:CDS 45.0%
ACCCTAGGTAATTCCAGGAA+TGG - chr7_1:21243305-21243324 None:intergenic 45.0%
AATGCACCCTAGGTAATTCC+AGG - chr7_1:21243310-21243329 None:intergenic 45.0%
GGAATTACCTAGGGTGCATT+TGG + chr7_1:21243310-21243329 Msa1013880:intron 45.0%
TGTTTGTCCAAATGCACCCT+AGG - chr7_1:21243320-21243339 None:intergenic 45.0%
CCAGAATAGGACAGAGCAAA+AGG - chr7_1:21243792-21243811 None:intergenic 45.0%
! CCTTTTGCTCTGTCCTATTC+TGG + chr7_1:21243789-21243808 Msa1013880:intron 45.0%
GAGATTGGGTCAGATCTTCA+GGG + chr7_1:21243970-21243989 Msa1013880:CDS 45.0%
! GCCGATTTCACTTCATCTTC+AGG - chr7_1:21244036-21244055 None:intergenic 45.0%
GGAGAGACTCCGAATATCAA+TGG + chr7_1:21244062-21244081 Msa1013880:CDS 45.0%
!!! GTCATCGGATTTTGGAGTCT+TGG - chr7_1:21244124-21244143 None:intergenic 45.0%
! TCTTCCTCGTCATCGGATTT+TGG - chr7_1:21244132-21244151 None:intergenic 45.0%
TTCCTCATCTTCCTCGTCAT+CGG - chr7_1:21244139-21244158 None:intergenic 45.0%
ATCCAAATTAACTGCCGAGG+AGG + chr7_1:21244221-21244240 Msa1013880:CDS 45.0%
AAGCAGCAGTACTACAAGAG+TGG + chr7_1:21244262-21244281 Msa1013880:CDS 45.0%
!!! TCTTTTGGGGCTTTGAGTGA+CGG + chr7_1:21244374-21244393 Msa1013880:three_prime_UTR 45.0%
CAGATACCGGACAGTTTCTT+GGG - chr7_1:21244460-21244479 None:intergenic 45.0%
TCAGATACCGGACAGTTTCT+TGG - chr7_1:21244461-21244480 None:intergenic 45.0%
!!! TTATTTTTTTAATAATATCA+AGG + chr7_1:21236804-21236823 Msa1013880:intron 5.0%
!!! TATTGATTTTTTTTTTTAAT+TGG + chr7_1:21237940-21237959 Msa1013880:intron 5.0%
!!! ATATATATTTTTTTTTGTAA+TGG + chr7_1:21239840-21239859 Msa1013880:intron 5.0%
!!! TTTTTTTTTTTAATAAGAAA+AGG - chr7_1:21242082-21242101 None:intergenic 5.0%
!!! GGCGAGATCGTTGATTTTGC+CGG + chr7_1:21236217-21236236 Msa1013880:CDS 50.0%
! GTTAAAGCTGTTGCTTCGGG+CGG + chr7_1:21236281-21236300 Msa1013880:CDS 50.0%
! TTAAAGCTGTTGCTTCGGGC+GGG + chr7_1:21236282-21236301 Msa1013880:CDS 50.0%
GTCTTCTAGTGTAGGTGGTG+GGG + chr7_1:21236331-21236350 Msa1013880:CDS 50.0%
! TCTTCTAGTGTAGGTGGTGG+GGG + chr7_1:21236332-21236351 Msa1013880:CDS 50.0%
!! GGAACCGGCGTTGATTTATG+AGG + chr7_1:21236439-21236458 Msa1013880:CDS 50.0%
!! CCGGCGTTGATTTATGAGGT+TGG + chr7_1:21236443-21236462 Msa1013880:CDS 50.0%
TATTTGGCTGATGTGCCTGG+AGG + chr7_1:21236479-21236498 Msa1013880:CDS 50.0%
ATTTGGCTGATGTGCCTGGA+GGG + chr7_1:21236480-21236499 Msa1013880:CDS 50.0%
TGATGTGCCTGGAGGGAAAA+CGG + chr7_1:21236487-21236506 Msa1013880:CDS 50.0%
TGCGATCAGATTCTGCTCTC+AGG - chr7_1:21237277-21237296 None:intergenic 50.0%
!! GCTAAGGAAAGTGTCCGAAG+AGG + chr7_1:21237347-21237366 Msa1013880:CDS 50.0%
CGAGAGGTTTCTGACCTCTT+CGG - chr7_1:21237364-21237383 None:intergenic 50.0%
GCAATATCAGTTCCAGCGAG+AGG - chr7_1:21237380-21237399 None:intergenic 50.0%
GGAGGAGTTAGTTGCTTCAC+TGG + chr7_1:21237466-21237485 Msa1013880:CDS 50.0%
! GGAGCTTTGGCATATGGAAC+TGG + chr7_1:21237560-21237579 Msa1013880:CDS 50.0%
! CACCCGATTTAGTTCGAGCT+CGG - chr7_1:21240212-21240231 None:intergenic 50.0%
AATCGGGTGGATGTACGTGT+TGG + chr7_1:21240223-21240242 Msa1013880:CDS 50.0%
TCCAGGCTAATCAAGCACGA+TGG + chr7_1:21240524-21240543 Msa1013880:intron 50.0%
! TCCATCGTGCTTGATTAGCC+TGG - chr7_1:21240528-21240547 None:intergenic 50.0%
TACGGAAGTGATTGCAGGAG+CGG + chr7_1:21240812-21240831 Msa1013880:intron 50.0%
! GAGCGGTCTGTTTTGTGCAA+TGG + chr7_1:21240829-21240848 Msa1013880:intron 50.0%
GTATGTGTCATCACTGCCAC+TGG + chr7_1:21240955-21240974 Msa1013880:intron 50.0%
TGTCATCACTGCCACTGGAT+TGG + chr7_1:21240960-21240979 Msa1013880:intron 50.0%
!! ACTGAATGGGTTGGTCAGAG+AGG + chr7_1:21241638-21241657 Msa1013880:intron 50.0%
! GGTTGGTCAGAGAGGAATGT+GGG + chr7_1:21241646-21241665 Msa1013880:intron 50.0%
TTTGAGAGGGTCTGTCAACG+TGG + chr7_1:21241686-21241705 Msa1013880:intron 50.0%
! ATGGGGAATGGGGAGTATAG+CGG + chr7_1:21241737-21241756 Msa1013880:intron 50.0%
ATTCTGTCCCCCACCAAACT+TGG + chr7_1:21242192-21242211 Msa1013880:intron 50.0%
! TGCAGAACCAAGTTTGGTGG+GGG - chr7_1:21242202-21242221 None:intergenic 50.0%
GCATGCAGAACCAAGTTTGG+TGG - chr7_1:21242205-21242224 None:intergenic 50.0%
TCGGCATGCAGAACCAAGTT+TGG - chr7_1:21242208-21242227 None:intergenic 50.0%
AGTAAGAGGGGGAAACTACG+GGG + chr7_1:21242362-21242381 Msa1013880:intron 50.0%
ACTGCCTTGCAGTTGTGAAG+GGG + chr7_1:21242423-21242442 Msa1013880:intron 50.0%
AGCTACTTGACCCATGTTCC+TGG + chr7_1:21242728-21242747 Msa1013880:intron 50.0%
ACTGTTACACTGCACAGCAC+TGG - chr7_1:21242777-21242796 None:intergenic 50.0%
GTGCTGTGCAGTGTAACAGT+TGG + chr7_1:21242777-21242796 Msa1013880:CDS 50.0%
TGAAGGTGACTATGCTGAGG+AGG + chr7_1:21242881-21242900 Msa1013880:CDS 50.0%
CACAGTCGGAAAAACTCGAC+AGG - chr7_1:21243026-21243045 None:intergenic 50.0%
! CTGTCGAGTTTTTCCGACTG+TGG + chr7_1:21243024-21243043 Msa1013880:CDS 50.0%
! GTGGAATGGCTTGGAAGACA+AGG - chr7_1:21243165-21243184 None:intergenic 50.0%
CATATTATCCGCACAGTGGC+AGG + chr7_1:21243197-21243216 Msa1013880:CDS 50.0%
TGTCCCTGTTGTACCATTCC+TGG + chr7_1:21243289-21243308 Msa1013880:intron 50.0%
GCTGCTAAAACTTGGCATGG+TGG + chr7_1:21243826-21243845 Msa1013880:CDS 50.0%
AACTTGGCATGGTGGCTTCT+TGG + chr7_1:21243834-21243853 Msa1013880:CDS 50.0%
ACTTGGCATGGTGGCTTCTT+GGG + chr7_1:21243835-21243854 Msa1013880:CDS 50.0%
GGAGATTGGGTCAGATCTTC+AGG + chr7_1:21243969-21243988 Msa1013880:CDS 50.0%
TTGGGTCAGATCTTCAGGGT+TGG + chr7_1:21243974-21243993 Msa1013880:CDS 50.0%
!! TGATCTAACTGATGGTGGGG+TGG + chr7_1:21244002-21244021 Msa1013880:CDS 50.0%
TGAAGTGAAATCGGCTGCTG+CGG + chr7_1:21244041-21244060 Msa1013880:CDS 50.0%
TGGTTGGGCTGCCTTTAACA+AGG - chr7_1:21244097-21244116 None:intergenic 50.0%
!!! GATTTTGGAGTCTTGGGTCG+TGG - chr7_1:21244117-21244136 None:intergenic 50.0%
GACTCCAAAATCCGATGACG+AGG + chr7_1:21244125-21244144 Msa1013880:CDS 50.0%
ATCCGATGACGAGGAAGATG+AGG + chr7_1:21244134-21244153 Msa1013880:CDS 50.0%
TGACGAGGAAGATGAGGAAG+AGG + chr7_1:21244140-21244159 Msa1013880:CDS 50.0%
AGCCTCCTCGGCAGTTAATT+TGG - chr7_1:21244226-21244245 None:intergenic 50.0%
AGAGTGGCATATGCTCTGCA+AGG + chr7_1:21244278-21244297 Msa1013880:CDS 50.0%
GGCATATGCTCTGCAAGGAT+AGG + chr7_1:21244283-21244302 Msa1013880:CDS 50.0%
ACTTCGCCCAAGAAACTGTC+CGG + chr7_1:21244451-21244470 Msa1013880:three_prime_UTR 50.0%
! TAAAGCTGTTGCTTCGGGCG+GGG + chr7_1:21236283-21236302 Msa1013880:CDS 55.0%
TGCCTGGAGGGAAAACGGAA+TGG + chr7_1:21236492-21236511 Msa1013880:CDS 55.0%
GCCTGGAGGGAAAACGGAAT+GGG + chr7_1:21236493-21236512 Msa1013880:CDS 55.0%
AGAGGTCAGAAACCTCTCGC+TGG + chr7_1:21237365-21237384 Msa1013880:CDS 55.0%
AAAACTCGGGCATGGAGAGC+AGG + chr7_1:21237531-21237550 Msa1013880:CDS 55.0%
AAACTCGGGCATGGAGAGCA+GGG + chr7_1:21237532-21237551 Msa1013880:CDS 55.0%
GAGCAGGGTCATTGGAGCTT+TGG + chr7_1:21237547-21237566 Msa1013880:CDS 55.0%
GATCATCTGGGTCGTCTGCT+AGG - chr7_1:21238826-21238845 None:intergenic 55.0%
!! GTAACTGTCCAGCTCTAGGG+TGG - chr7_1:21238973-21238992 None:intergenic 55.0%
!! AGGGTTAGTTCACTGGGGTC+AGG - chr7_1:21239590-21239609 None:intergenic 55.0%
CGAGCTCGAACTAAATCGGG+TGG + chr7_1:21240210-21240229 Msa1013880:CDS 55.0%
! ACTGGACTAGGACATTCGGC+TGG + chr7_1:21241417-21241436 Msa1013880:intron 55.0%
!! GGGTTGGTCAGAGAGGAATG+TGG + chr7_1:21241645-21241664 Msa1013880:intron 55.0%
AGAGGGTCTGTCAACGTGGA+AGG + chr7_1:21241690-21241709 Msa1013880:intron 55.0%
GCTACTGCAGCACAGCAGTA+TGG + chr7_1:21243110-21243129 Msa1013880:CDS 55.0%
GGTGCGTCACCTTTCTTGAG+TGG + chr7_1:21243131-21243150 Msa1013880:CDS 55.0%
CTTGGCATGGTGGCTTCTTG+GGG + chr7_1:21243836-21243855 Msa1013880:CDS 55.0%
TGGAGTCTTGGGTCGTGGTT+GGG - chr7_1:21244112-21244131 None:intergenic 55.0%
TTGGAGTCTTGGGTCGTGGT+TGG - chr7_1:21244113-21244132 None:intergenic 55.0%
TGCTTGATGCTCAGCCTCCT+CGG - chr7_1:21244238-21244257 None:intergenic 55.0%
CGGGCGGGGTTGAGGTTATT+CGG + chr7_1:21236297-21236316 Msa1013880:CDS 60.0%
!! TCTAGTGTAGGTGGTGGGGG+TGG + chr7_1:21236335-21236354 Msa1013880:CDS 60.0%
! GCCCATTCCGTTTTCCCTCC+AGG - chr7_1:21236497-21236516 None:intergenic 60.0%
GGCATGGAGAGCAGGGTCAT+TGG + chr7_1:21237539-21237558 Msa1013880:CDS 60.0%
TCTGGGTCGTCTGCTAGGAG+TGG - chr7_1:21238821-21238840 None:intergenic 60.0%
! TACCTTTTCCCCAGGTGGGC+TGG + chr7_1:21239434-21239453 Msa1013880:intron 60.0%
CTGTAACACCAGCCCACCTG+GGG - chr7_1:21239445-21239464 None:intergenic 60.0%
GCTGTAACACCAGCCCACCT+GGG - chr7_1:21239446-21239465 None:intergenic 60.0%
TGCTGTAACACCAGCCCACC+TGG - chr7_1:21239447-21239466 None:intergenic 60.0%
!! GCTGGTGTTACAGCAGCCAG+AGG + chr7_1:21239452-21239471 Msa1013880:CDS 60.0%
CTGGCAAACTGGGCCACAGT+CGG - chr7_1:21243040-21243059 None:intergenic 60.0%
CCTGAAACCCTGCCACTGTG+CGG - chr7_1:21243208-21243227 None:intergenic 60.0%
! TGTTGCTTCGGGCGGGGTTG+AGG + chr7_1:21236289-21236308 Msa1013880:CDS 65.0%
!! TGTAGGTGGTGGGGGTGGTG+AGG + chr7_1:21236340-21236359 Msa1013880:CDS 65.0%
GGATCACGCCACCCTAGAGC+TGG + chr7_1:21238962-21238981 Msa1013880:CDS 65.0%
CACCAGCCCACCTGGGGAAA+AGG - chr7_1:21239439-21239458 None:intergenic 65.0%
CCGCACAGTGGCAGGGTTTC+AGG + chr7_1:21243205-21243224 Msa1013880:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 21236174 21244617 21236174 ID=Msa1013880;Name=Msa1013880
chr7_1 mRNA 21236174 21244617 21236174 ID=Msa1013880-mRNA-1;Parent=Msa1013880;Name=Msa1013880-mRNA-1;_AED=0.04;_eAED=0.04;_QI=5|1|1|1|1|1|7|294|934
chr7_1 exon 21236174 21236634 21236174 ID=Msa1013880-mRNA-1:exon:5070;Parent=Msa1013880-mRNA-1
chr7_1 exon 21237236 21237832 21237236 ID=Msa1013880-mRNA-1:exon:5071;Parent=Msa1013880-mRNA-1
chr7_1 exon 21238746 21239107 21238746 ID=Msa1013880-mRNA-1:exon:5072;Parent=Msa1013880-mRNA-1
chr7_1 exon 21239448 21239751 21239448 ID=Msa1013880-mRNA-1:exon:5073;Parent=Msa1013880-mRNA-1
chr7_1 exon 21240196 21240318 21240196 ID=Msa1013880-mRNA-1:exon:5074;Parent=Msa1013880-mRNA-1
chr7_1 exon 21242771 21243226 21242771 ID=Msa1013880-mRNA-1:exon:5075;Parent=Msa1013880-mRNA-1
chr7_1 exon 21243817 21244617 21243817 ID=Msa1013880-mRNA-1:exon:5076;Parent=Msa1013880-mRNA-1
chr7_1 five_prime_UTR 21236174 21236178 21236174 ID=Msa1013880-mRNA-1:five_prime_utr;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21236179 21236634 21236179 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21237236 21237832 21237236 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21238746 21239107 21238746 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21239448 21239751 21239448 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21240196 21240318 21240196 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21242771 21243226 21242771 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 CDS 21243817 21244323 21243817 ID=Msa1013880-mRNA-1:cds;Parent=Msa1013880-mRNA-1
chr7_1 three_prime_UTR 21244324 21244617 21244324 ID=Msa1013880-mRNA-1:three_prime_utr;Parent=Msa1013880-mRNA-1
Gene Sequence

>Msa1013880

ATGGTTGATTTTGTTTGGAAGAAACGTAGGGCGTTAATGGCGAGATCGTTGATTTTGCCGGTTGAGAATTTTCGGGCTACTGTGTTTCCGGTTGTTTATTCGGTTAAAGCTGTTGCTTCGGGCGGGGTTGAGGTTATTCGGAAGCTTTCGAAGTCTTCTAGTGTAGGTGGTGGGGGTGGTGAGGTTGATGCTAATGCTGAGAAATTGGTTGGTGTTTCGGATGTGGTTACACATTTGGCTCCGTTTTTGGTTTCATCGTTGGAACCGGCGTTGATTTATGAGGTTGGGATTAATATGTTGTATTTGGCTGATGTGCCTGGAGGGAAAACGGAATGGGCATCGCAATCGACTATTGCTATTCTTACACTGTGGGATAGACAGGAATTTGCTTCTGCTAGAGAGAGTATTGTTAGGGCTGTTGTTACCAATCTTCATCTGCTTGATCTTAATATGCAGGTTTCACTCTTCAAGAGGCTACTTTTGATGGTAAGAAACCTGAGAGCAGAATCTGATCGCATGCATGCTTTAGCTTGTATTTGTAGAACAGCTCTTTGTGTGGATCTATTTGCTAAGGAAAGTGTCCGAAGAGGTCAGAAACCTCTCGCTGGAACTGATATTGCTTCCCTTTTTGAAGATGCCAGAGTGAGTGATGATCTTAACAGCATTACAAGTAAAAGCATTTTTAGGGAGGAGTTAGTTGCTTCACTGGTTGAAAGTTGCTTTCAGCTGTCTTTGCCTTTGCCTGAACAGAAAAACTCGGGCATGGAGAGCAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATGGTGCATTAAATTGGACTGAACCTTCTTTAGAAGTGGTGGAAGTTTGTCGGCCTTGTGTTAAATGGGATTGTGATGGCCGCACCTATGCAATTGACTGCTACTTGAAGTTGCTTGTTAGGTTATGCTGCATATTTGATACTAGGGGCGGTGTAAAGAGAGTCAAAGATGGAGCTTCTCAGGACCAAATTTTGAATGAGACTAGATTGCAAAACTTGCAACGTGAACTTGTGAAGAACTTACGGGAGGTTAATACACCAAGAATATTGGCCCGACTTATATGGGCTATTGCGGAGCACATAGATATAGAAGGATTGGATCCACTCCTAGCAGACGACCCAGATGATCCTCTTAATGTCATTATTTCAAATATTCGCAAGGTTCTTTTCAATGTTGACTCAACCGCAGATACAACAAATAGAGTTCAAGATGTACAGGCAGTTCTTATATCTGCTCAAAGATTGGGATCACGCCACCCTAGAGCTGGACAGTTACTTACTAAAGAACTTGAAGAGTTTAGGACCAATGCTTTGGCTGATTCTGTAAGCAAGCACCAGTGCCGTTTGATATTGCAAAGAATCAAATATGCTTCAGGTCATCCTGATAGTAGGTGGGCTGGTGTTACAGCAGCCAGAGGTGATTACCCATTTAGCCATCACAAATTAACTGTTCAATTTTATGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGTTTGGTTCACAAAGCTATTTTAGAGCTATGGAGACCTGACCCCAGTGAACTAACCCTTTTGCTGACTAAAGGAGTTGATGCTACTTCACTTAAGGTTCCTCCTACTGCAAATACTTTAACTGGAAGCAGTGATCCTTGCTATGTTGAAGGTTATCATTTAGCAGATTCAAGTGATGGGAGGATAACTCTGCATTTAAAGGTCTTAAATTTAACCGAGCTCGAACTAAATCGGGTGGATGTACGTGTTGGATTATCTGGTGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGCGGCAGTTGCGTAATCTTGTTTCACAGGATCCAGTGCTGTGCAGTGTAACAGTTGGTGTTTCCCACTTTGAAAGATGTGCCCTTTGGGTTCAAGTGTTGTATTACCCATTTTATGGCAGTGGTGTTGTTGGAGACTATGAAGGTGACTATGCTGAGGAGGATCCTCAAGTCATGAGACAGAAGAGAAGCTTAAGGCCCGAATTAGGTGAACCCGTGATTTTGAGATGTCAACCTTATAAAATTCCATTGACTGAGCTACTTCTACCGCACCAAATATCACCTGTCGAGTTTTTCCGACTGTGGCCCAGTTTGCCAGCTATTGTAGAATACACCGGTACATATACATATGAAGGGAGTGGCTTTCAGGCTACTGCAGCACAGCAGTATGGTGCGTCACCTTTCTTGAGTGGACTGAAATCCTTGTCTTCCAAGCCATTCCACAAAGTTTGTTCACATATTATCCGCACAGTGGCAGGGTTTCAGTTGTGTTATGCTGCTAAAACTTGGCATGGTGGCTTCTTGGGGTTGATGATTTTTGGTGCAAGTGAAGTAAGTAGAAATGTGGATTTGGGTGACGAGACGACAACCATGATGTGCAAGTTTGTGGTACGAGCATCTGATGCATCTATTACTAAGGAGATTGGGTCAGATCTTCAGGGTTGGTGTGATGATCTAACTGATGGTGGGGTGGAGTATATGCCTGAAGATGAAGTGAAATCGGCTGCTGCGGAGAGACTCCGAATATCAATGGAAAGGATAGCCTTGTTAAAGGCAGCCCAACCACGACCCAAGACTCCAAAATCCGATGACGAGGAAGATGAGGAAGAGGATAAAGAGAAAAGGAAGGACGGGGATGAAGATGAGAAAAAGAAGGGACCTTCAACTCTATCCAAATTAACTGCCGAGGAGGCTGAGCATCAAGCACTTCAAGCAGCAGTACTACAAGAGTGGCATATGCTCTGCAAGGATAGGACCACTGAAGTTAACTAA

Protein sequence

>Msa1013880

MVDFVWKKRRALMARSLILPVENFRATVFPVVYSVKAVASGGVEVIRKLSKSSSVGGGGGEVDANAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKTEWASQSTIAILTLWDRQEFASARESIVRAVVTNLHLLDLNMQVSLFKRLLLMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPLAGTDIASLFEDARVSDDLNSITSKSIFREELVASLVESCFQLSLPLPEQKNSGMESRVIGALAYGTGYGALNWTEPSLEVVEVCRPCVKWDCDGRTYAIDCYLKLLVRLCCIFDTRGGVKRVKDGASQDQILNETRLQNLQRELVKNLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIRKVLFNVDSTADTTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRTNALADSVSKHQCRLILQRIKYASGHPDSRWAGVTAARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTKGVDATSLKVPPTANTLTGSSDPCYVEGYHLADSSDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRNLVSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSGVVGDYEGDYAEEDPQVMRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAIVEYTGTYTYEGSGFQATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFQLCYAAKTWHGGFLGLMIFGASEVSRNVDLGDETTTMMCKFVVRASDASITKEIGSDLQGWCDDLTDGGVEYMPEDEVKSAAAERLRISMERIALLKAAQPRPKTPKSDDEEDEEEDKEKRKDGDEDEKKKGPSTLSKLTAEEAEHQALQAAVLQEWHMLCKDRTTEVN*