Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383820 | PNX96892.1 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383820 | sp|Q39445|TBB_CICAR | 98.664 | 449 | 6 | 0 | 1 | 449 | 1 | 449 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383820 | A0A2K3N1J7 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013970 | Msa1383820 | 0.836266 | 1.035008e-56 | -8.615850e-47 |
| Msa0040790 | Msa1383820 | 0.823044 | 1.712037e-53 | -8.615850e-47 |
| Msa0057900 | Msa1383820 | 0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa1365820 | Msa1383820 | 0.828986 | 6.626410e-55 | -8.615850e-47 |
| Msa1368390 | Msa1383820 | 0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa1373170 | Msa1383820 | 0.846193 | 2.533557e-59 | -8.615850e-47 |
| Msa1383820 | Msa1404680 | 0.835740 | 1.406966e-56 | -8.615850e-47 |
| Msa1383820 | Msa1455400 | 0.815614 | 8.446047e-52 | -8.615850e-47 |
| Msa1383820 | Msa1457770 | 0.819667 | 1.029649e-52 | -8.615850e-47 |
| Msa1383820 | Msa1464880 | 0.810456 | 1.142663e-50 | -8.615850e-47 |
| Msa0617940 | Msa1383820 | 0.870888 | 1.038013e-66 | -8.615850e-47 |
| Msa0692790 | Msa1383820 | 0.874336 | 7.311168e-68 | -8.615850e-47 |
| Msa0700970 | Msa1383820 | 0.827239 | 1.746011e-54 | -8.615850e-47 |
| Msa0703950 | Msa1383820 | 0.819395 | 1.187969e-52 | -8.615850e-47 |
| Msa0124910 | Msa1383820 | 0.826077 | 3.306776e-54 | -8.615850e-47 |
| Msa0143590 | Msa1383820 | 0.811157 | 8.056167e-51 | -8.615850e-47 |
| Msa0184500 | Msa1383820 | 0.814350 | 1.610847e-51 | -8.615850e-47 |
| Msa0209140 | Msa1383820 | 0.845944 | 2.961288e-59 | -8.615850e-47 |
| Msa0224110 | Msa1383820 | 0.821762 | 3.398770e-53 | -8.615850e-47 |
| Msa1249600 | Msa1383820 | 0.804864 | 1.760687e-49 | -8.615850e-47 |
| Msa1257570 | Msa1383820 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa1323070 | Msa1383820 | 0.810807 | 9.594360e-51 | -8.615850e-47 |
| Msa1326180 | Msa1383820 | 0.815812 | 7.631100e-52 | -8.615850e-47 |
| Msa1331300 | Msa1383820 | 0.814953 | 1.184745e-51 | -8.615850e-47 |
| Msa0380980 | Msa1383820 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
| Msa0385310 | Msa1383820 | 0.987638 | 5.480503e-171 | -8.615850e-47 |
| Msa0386880 | Msa1383820 | 0.809462 | 1.870043e-50 | -8.615850e-47 |
| Msa0387930 | Msa1383820 | 0.825434 | 4.698350e-54 | -8.615850e-47 |
| Msa0389690 | Msa1383820 | 0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa0428210 | Msa1383820 | 0.800678 | 1.287454e-48 | -8.615850e-47 |
| Msa0430230 | Msa1383820 | 0.860448 | 2.050609e-63 | -8.615850e-47 |
| Msa0479420 | Msa1383820 | 0.979092 | 3.248401e-147 | -8.615850e-47 |
| Msa1013190 | Msa1383820 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa1013880 | Msa1383820 | 0.811510 | 6.754372e-51 | -8.615850e-47 |
| Msa1024570 | Msa1383820 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa1031180 | Msa1383820 | 0.802698 | 4.958250e-49 | -8.615850e-47 |
| Msa1031390 | Msa1383820 | 0.817673 | 2.918296e-52 | -8.615850e-47 |
| Msa1045230 | Msa1383820 | 0.808530 | 2.960463e-50 | -8.615850e-47 |
| Msa1045280 | Msa1383820 | 0.816393 | 5.660932e-52 | -8.615850e-47 |
| Msa1070890 | Msa1383820 | 0.859397 | 4.255776e-63 | -8.615850e-47 |
| Msa1078830 | Msa1383820 | 0.823369 | 1.437717e-53 | -8.615850e-47 |
| Msa1078890 | Msa1383820 | 0.851764 | 7.173445e-61 | -8.615850e-47 |
| Msa1088320 | Msa1383820 | 0.824340 | 8.513613e-54 | -8.615850e-47 |
| Msa1101120 | Msa1383820 | 0.819598 | 1.067831e-52 | -8.615850e-47 |
| Msa1104110 | Msa1383820 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0249850 | Msa1383820 | 0.815687 | 8.135427e-52 | -8.615850e-47 |
| Msa0263780 | Msa1383820 | 0.807181 | 5.729569e-50 | -8.615850e-47 |
| Msa0276860 | Msa1383820 | 0.817876 | 2.626438e-52 | -8.615850e-47 |
| Msa0288620 | Msa1383820 | 0.820506 | 6.616255e-53 | -8.615850e-47 |
| Msa0301520 | Msa1383820 | 0.803687 | 3.094900e-49 | -8.615850e-47 |
| Msa0309720 | Msa1383820 | 0.811993 | 5.300889e-51 | -8.615850e-47 |
| Msa0326710 | Msa1383820 | 0.865791 | 4.569540e-65 | -8.615850e-47 |
| Msa0339020 | Msa1383820 | 0.804445 | 2.152525e-49 | -8.615850e-47 |
| Msa1119430 | Msa1383820 | 0.808541 | 2.944013e-50 | -8.615850e-47 |
| Msa1119440 | Msa1383820 | 0.800839 | 1.194078e-48 | -8.615850e-47 |
| Msa1147700 | Msa1383820 | 0.833827 | 4.263418e-56 | -8.615850e-47 |
| Msa1165090 | Msa1383820 | 0.833982 | 3.899415e-56 | -8.615850e-47 |
| Msa1166100 | Msa1383820 | 0.804860 | 1.763891e-49 | -8.615850e-47 |
| Msa1169220 | Msa1383820 | 0.819197 | 1.317647e-52 | -8.615850e-47 |
| Msa1169660 | Msa1383820 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
| Msa1193910 | Msa1383820 | 0.804773 | 1.839184e-49 | -8.615850e-47 |
| Msa0490430 | Msa1383820 | 0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0518590 | Msa1383820 | 0.804135 | 2.498052e-49 | -8.615850e-47 |
| Msa0519150 | Msa1383820 | 0.815045 | 1.130379e-51 | -8.615850e-47 |
| Msa0523110 | Msa1383820 | 0.990040 | 8.737000e-181 | -8.615850e-47 |
| Msa0525880 | Msa1383820 | 0.832239 | 1.058817e-55 | -8.615850e-47 |
| Msa0563090 | Msa1383820 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
| Msa0574900 | Msa1383820 | 0.813041 | 3.128160e-51 | -8.615850e-47 |
| Msa0930770 | Msa1383820 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
| Msa0968360 | Msa1383820 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383820 | MtrunA17_Chr3g0142731 | 99.333 | 450 | 2 | 1 | 1 | 449 | 1 | 450 | 0.0 | 936 |
| Msa1383820 | MtrunA17_Chr2g0292921 | 94.907 | 432 | 20 | 1 | 1 | 432 | 1 | 430 | 0.0 | 839 |
| Msa1383820 | MtrunA17_Chr7g0255791 | 93.750 | 432 | 25 | 1 | 1 | 432 | 1 | 430 | 0.0 | 833 |
| Msa1383820 | MtrunA17_Chr4g0051631 | 93.981 | 432 | 24 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| Msa1383820 | MtrunA17_Chr1g0203181 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa1383820 | MtrunA17_Chr4g0008401 | 92.593 | 432 | 30 | 1 | 1 | 432 | 1 | 430 | 0.0 | 827 |
| Msa1383820 | MtrunA17_Chr4g0008361 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 824 |
| Msa1383820 | MtrunA17_Chr8g0386781 | 92.558 | 430 | 30 | 1 | 1 | 430 | 1 | 428 | 0.0 | 820 |
| Msa1383820 | MtrunA17_Chr4g0007371 | 92.627 | 434 | 28 | 2 | 1 | 432 | 1 | 432 | 0.0 | 820 |
| Msa1383820 | MtrunA17_Chr8g0393021 | 89.640 | 444 | 40 | 3 | 1 | 441 | 1 | 441 | 0.0 | 817 |
| Msa1383820 | MtrunA17_Chr8g0378821 | 40.553 | 434 | 250 | 1 | 1 | 426 | 1 | 434 | 1.01e-124 | 369 |
| Msa1383820 | MtrunA17_Chr1g0206881 | 40.611 | 458 | 244 | 4 | 1 | 447 | 1 | 441 | 7.79e-123 | 365 |
| Msa1383820 | MtrunA17_Chr3g0140821 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 1.23e-122 | 364 |
| Msa1383820 | MtrunA17_Chr4g0054511 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 2.83e-122 | 363 |
| Msa1383820 | MtrunA17_Chr7g0253411 | 39.159 | 452 | 253 | 2 | 1 | 444 | 1 | 438 | 3.63e-122 | 363 |
| Msa1383820 | MtrunA17_Chr6g0461281 | 39.955 | 448 | 259 | 3 | 1 | 438 | 1 | 448 | 4.57e-122 | 363 |
| Msa1383820 | MtrunA17_Chr2g0300671 | 36.830 | 448 | 267 | 4 | 1 | 440 | 1 | 440 | 1.38e-100 | 307 |
| Msa1383820 | MtrunA17_Chr2g0300491 | 36.504 | 452 | 270 | 4 | 1 | 440 | 1 | 447 | 1.28e-99 | 306 |
| Msa1383820 | MtrunA17_Chr7g0275431 | 35.498 | 462 | 267 | 10 | 2 | 444 | 3 | 452 | 1.17e-96 | 298 |
| Msa1383820 | MtrunA17_Chr3g0109241 | 30.370 | 135 | 86 | 1 | 271 | 397 | 4 | 138 | 1.73e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383820 | AT1G75780.1 | 94.676 | 432 | 22 | 1 | 1 | 432 | 1 | 431 | 0.0 | 840 |
| Msa1383820 | AT1G20010.1 | 94.213 | 432 | 24 | 1 | 1 | 432 | 1 | 431 | 0.0 | 836 |
| Msa1383820 | AT5G12250.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| Msa1383820 | AT5G23860.2 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa1383820 | AT5G23860.1 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa1383820 | AT5G62690.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| Msa1383820 | AT5G62700.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| Msa1383820 | AT2G29550.1 | 93.072 | 433 | 28 | 1 | 1 | 433 | 1 | 431 | 0.0 | 825 |
| Msa1383820 | AT5G44340.1 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 820 |
| Msa1383820 | AT4G20890.1 | 93.023 | 430 | 28 | 1 | 1 | 430 | 1 | 428 | 0.0 | 819 |
| Msa1383820 | AT1G64740.1 | 40.092 | 434 | 252 | 1 | 1 | 426 | 1 | 434 | 2.52e-124 | 369 |
| Msa1383820 | AT5G19780.1 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.99e-124 | 368 |
| Msa1383820 | AT5G19770.1 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.99e-124 | 368 |
| Msa1383820 | AT1G50010.1 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.55e-122 | 363 |
| Msa1383820 | AT1G04820.1 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.55e-122 | 363 |
| Msa1383820 | AT4G14960.2 | 40.503 | 437 | 246 | 3 | 1 | 426 | 1 | 434 | 2.67e-121 | 361 |
| Msa1383820 | AT4G14960.1 | 40.360 | 389 | 218 | 3 | 1 | 378 | 1 | 386 | 6.81e-102 | 311 |
| Msa1383820 | AT5G05620.1 | 35.065 | 462 | 269 | 10 | 2 | 444 | 3 | 452 | 1.17e-95 | 296 |
| Msa1383820 | AT3G61650.1 | 34.979 | 466 | 272 | 10 | 2 | 448 | 3 | 456 | 2.05e-95 | 295 |
Find 174 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATGAAGAATGAGATTT+AGG | 0.135702 | tig0020612:-107876 | None:intergenic |
| GGGACAGATAGATTTATTTA+TGG | 0.176111 | tig0020612:-107778 | None:intergenic |
| TCGCTTTGTCTTTGAGAAAA+TGG | 0.195099 | tig0020612:+111375 | Msa1383820:three_prime_UTR |
| CCCAGAATTTGGATCCAATT+TGG | 0.211203 | tig0020612:-107944 | None:intergenic |
| AATCTGGTGCTGGTAATAAT+TGG | 0.217101 | tig0020612:+108189 | Msa1383820:CDS |
| ACCAAATTGGATCCAAATTC+TGG | 0.227415 | tig0020612:+107943 | Msa1383820:CDS |
| GCATATCACCTCCCAGAATT+TGG | 0.235569 | tig0020612:-107955 | None:intergenic |
| TATTACACTTCAAATGAAAT+TGG | 0.243042 | tig0020612:-111220 | None:intergenic |
| GATTTAGGGTTTGGTGTGTT+TGG | 0.246640 | tig0020612:-107861 | None:intergenic |
| CTTGGAGGAGGCACGGGTTC+TGG | 0.250950 | tig0020612:+110068 | Msa1383820:CDS |
| ATTTAGGGTTTGGTGTGTTT+GGG | 0.257151 | tig0020612:-107860 | None:intergenic |
| CACATTTGTTGAGTCAGTTC+CGG | 0.265997 | tig0020612:-110606 | None:intergenic |
| CTTCAATTCAGGAGATGTTT+AGG | 0.278983 | tig0020612:+110862 | Msa1383820:CDS |
| GAATACATTCATAGCTTTAT+AGG | 0.282507 | tig0020612:-111314 | None:intergenic |
| TGGGAACTCAACTTCAATTC+AGG | 0.292593 | tig0020612:+110851 | Msa1383820:CDS |
| ACATGTTGTCTGAGGTTTCC+TGG | 0.293676 | tig0020612:+110456 | Msa1383820:CDS |
| TGTATAGTAATAAAACCATT+AGG | 0.296035 | tig0020612:-111117 | None:intergenic |
| TGTTCCTAGAGCAGTTCTTA+TGG | 0.307963 | tig0020612:+108085 | Msa1383820:CDS |
| GGCCAATGCGGTAACCAAAT+TGG | 0.311892 | tig0020612:+107930 | Msa1383820:CDS |
| GGACGACATCTTCAAATTCT+TGG | 0.312961 | tig0020612:-110820 | None:intergenic |
| ACATTTGTTGAGTCAGTTCC+GGG | 0.324818 | tig0020612:-110605 | None:intergenic |
| GAAGAATGAGATTTAGGGTT+TGG | 0.343322 | tig0020612:-107870 | None:intergenic |
| ATTTCATTTGTTTGTTTGAA+AGG | 0.349341 | tig0020612:-107665 | None:intergenic |
| AGCAGCACACATCATATTCT+TGG | 0.353564 | tig0020612:-110634 | None:intergenic |
| AAGATGAAGAATGAGATTTA+GGG | 0.355346 | tig0020612:-107875 | None:intergenic |
| GATTTGTTCATCAACCTCTT+TGG | 0.362636 | tig0020612:-110715 | None:intergenic |
| CTATTGCATCCTGGTATTGT+TGG | 0.375777 | tig0020612:-111013 | None:intergenic |
| ATTCTTCATACTTTGTTGAA+TGG | 0.376461 | tig0020612:+110757 | Msa1383820:CDS |
| CTCTATTGATATCAAAGATT+AGG | 0.378228 | tig0020612:+110099 | Msa1383820:CDS |
| CCCAGTATACCAATGCAAAA+AGG | 0.378377 | tig0020612:-110925 | None:intergenic |
| CACTTTATGACATTTGCTTC+AGG | 0.383936 | tig0020612:+110270 | Msa1383820:CDS |
| ACACTAGACTTCACATTGTT+GGG | 0.386553 | tig0020612:-110783 | None:intergenic |
| CACACTAGACTTCACATTGT+TGG | 0.390184 | tig0020612:-110784 | None:intergenic |
| CTATCGGGGTAATGCCCTAA+TGG | 0.391267 | tig0020612:+111102 | Msa1383820:three_prime_UTR |
| CGTCCTGATAATTTCGTGTT+CGG | 0.393752 | tig0020612:+108164 | Msa1383820:CDS |
| TCTATTGATATCAAAGATTA+GGG | 0.396270 | tig0020612:+110100 | Msa1383820:CDS |
| CTCATGCTTCATTTGAAAGC+TGG | 0.396801 | tig0020612:+111461 | Msa1383820:three_prime_UTR |
| CAAGTTTGCCACTCCCTTGG+AGG | 0.398051 | tig0020612:+110053 | Msa1383820:CDS |
| AAGAATAAAAGAAAAGCTTA+TGG | 0.400250 | tig0020612:-111171 | None:intergenic |
| AGAGAGTAACATGAATGATT+TGG | 0.405537 | tig0020612:+110980 | Msa1383820:CDS |
| CACTCCCTTGGAGGAGGCAC+GGG | 0.410186 | tig0020612:+110062 | Msa1383820:CDS |
| AATTTCGTGTTCGGACAATC+TGG | 0.410356 | tig0020612:+108173 | Msa1383820:CDS |
| TTTCAAGTTTGCCACTCCCT+TGG | 0.411514 | tig0020612:+110050 | Msa1383820:CDS |
| AGCAGTTTACTGCAATGTTC+CGG | 0.413290 | tig0020612:+110895 | Msa1383820:CDS |
| TGTCCGAACACGAAATTATC+AGG | 0.413771 | tig0020612:-108167 | None:intergenic |
| ATGGAAAGAGAGGGAAATGC+GGG | 0.413953 | tig0020612:-107759 | None:intergenic |
| ACAGATAGTGTAGCATTATA+TGG | 0.417861 | tig0020612:-110197 | None:intergenic |
| GACGACATCTTCAAATTCTT+GGG | 0.419923 | tig0020612:-110819 | None:intergenic |
| AGTCAAGTATCGGCCATGTC+GGG | 0.423301 | tig0020612:-110661 | None:intergenic |
| TCTTGGAGTAAGGGACTTGA+TGG | 0.427904 | tig0020612:-111438 | None:intergenic |
| GTATAGTAATAAAACCATTA+GGG | 0.428564 | tig0020612:-111116 | None:intergenic |
| AGAGAGATCTTGCACGTTCA+AGG | 0.432109 | tig0020612:+107906 | Msa1383820:CDS |
| GTGTATTACAATGAAGCTTC+TGG | 0.433261 | tig0020612:+108053 | Msa1383820:CDS |
| TTTCATTTGTTTGTTTGAAA+GGG | 0.439229 | tig0020612:-107664 | None:intergenic |
| ATCTGGTGCTGGTAATAATT+GGG | 0.444114 | tig0020612:+108190 | Msa1383820:CDS |
| ACAACTGTGTCAGATACCTT+TGG | 0.444799 | tig0020612:-110170 | None:intergenic |
| GGAGGCACGGGTTCTGGCAT+GGG | 0.445967 | tig0020612:+110074 | Msa1383820:CDS |
| AGATTTATTTATGGAAAGAG+AGG | 0.446051 | tig0020612:-107769 | None:intergenic |
| CTGAATGCGTCCTGTCAGAC+AGG | 0.447758 | tig0020612:+111269 | Msa1383820:three_prime_UTR |
| GTCAATCAACTCAGCACCTT+CGG | 0.448375 | tig0020612:-108228 | None:intergenic |
| ACCTTCGGTATAATGACCTT+TGG | 0.450279 | tig0020612:-108213 | None:intergenic |
| GAAGCATGAGTCTTGGAGTA+AGG | 0.450845 | tig0020612:-111448 | None:intergenic |
| GGTTAATATGGTAATAATGG+AGG | 0.455599 | tig0020612:-107736 | None:intergenic |
| GTCAATTGAACTCTGATCTC+AGG | 0.457782 | tig0020612:+110478 | Msa1383820:CDS |
| TTGGTATACTGGGGAGGGAA+TGG | 0.459874 | tig0020612:+110935 | Msa1383820:CDS |
| TTCAAATGAAGCATGAGTCT+TGG | 0.462295 | tig0020612:-111455 | None:intergenic |
| TTCTCAAAGACAAAGCGAAT+AGG | 0.466949 | tig0020612:-111370 | None:intergenic |
| AGTATCAGATCTGGTCCGTT+TGG | 0.467213 | tig0020612:+108131 | Msa1383820:CDS |
| CCACTCCCTTGGAGGAGGCA+CGG | 0.467869 | tig0020612:+110061 | Msa1383820:CDS |
| ATCCAATTTGGTTACCGCAT+TGG | 0.468483 | tig0020612:-107932 | None:intergenic |
| GAAATAGTGTGCACGCCGTT+TGG | 0.469993 | tig0020612:+111500 | Msa1383820:three_prime_UTR |
| CCTCCTCAGCTATTGCATCC+TGG | 0.470174 | tig0020612:-111022 | None:intergenic |
| AAAGTAAGCATCATTCTGTC+TGG | 0.471664 | tig0020612:-110131 | None:intergenic |
| CCAAATTGGATCCAAATTCT+GGG | 0.472580 | tig0020612:+107944 | Msa1383820:CDS |
| AGAAGGTGAGGAACATTATG+AGG | 0.473711 | tig0020612:+111061 | Msa1383820:CDS |
| GAGTCAGTTCCGGGACAGTA+AGG | 0.474292 | tig0020612:-110596 | None:intergenic |
| AGGTGGAAATGATACTCAAT+TGG | 0.476330 | tig0020612:+108019 | Msa1383820:CDS |
| AGGAGGCACGGGTTCTGGCA+TGG | 0.476981 | tig0020612:+110073 | Msa1383820:CDS |
| TACACTATCTGTCCACCAAC+TGG | 0.477941 | tig0020612:+110208 | Msa1383820:CDS |
| TGATTTCTGCAACTATGAGC+GGG | 0.478950 | tig0020612:+110430 | Msa1383820:CDS |
| ACATTATGAGGAGCAGTAGC+TGG | 0.483996 | tig0020612:+111073 | Msa1383820:exon |
| CTGATACTTTCCATGGTACC+AGG | 0.490414 | tig0020612:-108116 | None:intergenic |
| GTAATAATGGAGGGGAGGGA+TGG | 0.490422 | tig0020612:-107726 | None:intergenic |
| TTAATATGGTAATAATGGAG+GGG | 0.494525 | tig0020612:-107734 | None:intergenic |
| GAGAATTGTGATTGCTTGCA+AGG | 0.495773 | tig0020612:+108281 | Msa1383820:CDS |
| TTTGCACCTCTCACTTCTCG+TGG | 0.496790 | tig0020612:+110555 | Msa1383820:CDS |
| GAACACGGCATTGATCCAAC+TGG | 0.497409 | tig0020612:+107981 | Msa1383820:CDS |
| AGTTGAGTTCCCAATAAAAG+TGG | 0.497826 | tig0020612:-110841 | None:intergenic |
| GAAGATGATTATGAAGAAGA+AGG | 0.502318 | tig0020612:+111044 | Msa1383820:CDS |
| AAAAGTGAAGACGAGGGAAT+GGG | 0.507198 | tig0020612:-110521 | None:intergenic |
| AGTAGCTGGATCAAACTATC+GGG | 0.507378 | tig0020612:+111087 | Msa1383820:exon |
| GTGTCAGATACCTTTGGAGA+TGG | 0.509553 | tig0020612:-110164 | None:intergenic |
| GTGTTCGGACAATCTGGTGC+TGG | 0.513250 | tig0020612:+108179 | Msa1383820:CDS |
| CAGTAGCTGGATCAAACTAT+CGG | 0.516295 | tig0020612:+111086 | Msa1383820:exon |
| TTGCATTGGTATACTGGGGA+GGG | 0.517335 | tig0020612:+110930 | Msa1383820:CDS |
| CCGTGCCTCCTCCAAGGGAG+TGG | 0.517493 | tig0020612:-110061 | None:intergenic |
| TTTGGGGAAATGAAATGAAA+TGG | 0.518610 | tig0020612:-107843 | None:intergenic |
| ATAGAATAACCCTGTCTGAC+AGG | 0.525232 | tig0020612:-111279 | None:intergenic |
| TGATTATCTTCTCAACCAAA+CGG | 0.525441 | tig0020612:-111515 | None:intergenic |
| GTTAATATGGTAATAATGGA+GGG | 0.526111 | tig0020612:-107735 | None:intergenic |
| TGGGGAGGGAATGGATGAGA+TGG | 0.529822 | tig0020612:+110944 | Msa1383820:CDS |
| GTTTGCCACTCCCTTGGAGG+AGG | 0.531497 | tig0020612:+110056 | Msa1383820:CDS |
| ACCATGGAAAGTATCAGATC+TGG | 0.532094 | tig0020612:+108122 | Msa1383820:CDS |
| GGAAAATATGTAAGCGAAGG+TGG | 0.533206 | tig0020612:+108002 | Msa1383820:CDS |
| GAACTCTGATCTCAGGAAGC+TGG | 0.535008 | tig0020612:+110485 | Msa1383820:CDS |
| TATGGTAATAATGGAGGGGA+GGG | 0.535178 | tig0020612:-107730 | None:intergenic |
| TGTCAGATACCTTTGGAGAT+GGG | 0.536713 | tig0020612:-110163 | None:intergenic |
| TTTAGGGTTTGGTGTGTTTG+GGG | 0.538731 | tig0020612:-107859 | None:intergenic |
| ATCGAGTGTAAAGCAAAGAC+AGG | 0.539133 | tig0020612:-111414 | None:intergenic |
| TATCTGTCCCTCTCTTCGAT+TGG | 0.540481 | tig0020612:+107791 | Msa1383820:five_prime_UTR |
| CAATTCAGGAGATGTTTAGG+AGG | 0.541715 | tig0020612:+110865 | Msa1383820:CDS |
| CAGAACCCGTGCCTCCTCCA+AGG | 0.541892 | tig0020612:-110067 | None:intergenic |
| CAGTCAAGTATCGGCCATGT+CGG | 0.542390 | tig0020612:-110662 | None:intergenic |
| AGATCCATAAGAACTGCTCT+AGG | 0.542823 | tig0020612:-108089 | None:intergenic |
| GGATCTTGAACCTGGTACCA+TGG | 0.545394 | tig0020612:+108106 | Msa1383820:CDS |
| AGAGGTGATACTTACAGCTA+GGG | 0.546469 | tig0020612:-110310 | None:intergenic |
| AATGGATGAGATGGAGTTCA+CGG | 0.548252 | tig0020612:+110953 | Msa1383820:CDS |
| AAGCATGAGTCTTGGAGTAA+GGG | 0.549329 | tig0020612:-111447 | None:intergenic |
| TATGGAAAGAGAGGGAAATG+CGG | 0.552645 | tig0020612:-107760 | None:intergenic |
| GTATGTATCCCTTACTGTCC+CGG | 0.555378 | tig0020612:+110587 | Msa1383820:CDS |
| TTGCACCTCTCACTTCTCGT+GGG | 0.556219 | tig0020612:+110556 | Msa1383820:CDS |
| AGAAAATGCAGATGAGTGTA+TGG | 0.557071 | tig0020612:+110232 | Msa1383820:CDS |
| CGGAACTGACTCAACAAATG+TGG | 0.558969 | tig0020612:+110607 | Msa1383820:CDS |
| TTGCAGATGCAGTCAAGTAT+CGG | 0.563760 | tig0020612:-110671 | None:intergenic |
| GTTCTTATGGATCTTGAACC+TGG | 0.565674 | tig0020612:+108098 | Msa1383820:CDS |
| GACATCTTCAAATTCTTGGG+TGG | 0.565762 | tig0020612:-110816 | None:intergenic |
| ACATCTTCAAATTCTTGGGT+GGG | 0.570008 | tig0020612:-110815 | None:intergenic |
| TTTGAGAAAATGGTTGCACT+TGG | 0.570956 | tig0020612:+111385 | Msa1383820:three_prime_UTR |
| TTTGCATTGGTATACTGGGG+AGG | 0.575042 | tig0020612:+110929 | Msa1383820:CDS |
| CCAGGATGCAATAGCTGAGG+AGG | 0.575079 | tig0020612:+111022 | Msa1383820:CDS |
| TGATTATGAAGAAGAAGGTG+AGG | 0.578671 | tig0020612:+111049 | Msa1383820:CDS |
| ACCAGATCTGATACTTTCCA+TGG | 0.579539 | tig0020612:-108123 | None:intergenic |
| GCTGGTAATAATTGGGCCAA+AGG | 0.579903 | tig0020612:+108197 | Msa1383820:CDS |
| AACAAATGAAATGAAACGAA+CGG | 0.581159 | tig0020612:+107676 | Msa1383820:five_prime_UTR |
| AGAACCCGTGCCTCCTCCAA+GGG | 0.582447 | tig0020612:-110066 | None:intergenic |
| ATATGGTAATAATGGAGGGG+AGG | 0.584175 | tig0020612:-107731 | None:intergenic |
| GATTTATTTATGGAAAGAGA+GGG | 0.584606 | tig0020612:-107768 | None:intergenic |
| AGATCAGAGTTCAATTGACC+AGG | 0.587313 | tig0020612:-110474 | None:intergenic |
| ACTGCATCTGCAATGTTCAG+AGG | 0.592344 | tig0020612:+110681 | Msa1383820:CDS |
| AGCGGTTCCAATCGAAGAGA+GGG | 0.594080 | tig0020612:-107798 | None:intergenic |
| AATTCAGGAGATGTTTAGGA+GGG | 0.594241 | tig0020612:+110866 | Msa1383820:CDS |
| GCTGTAGTAGATACACAGAT+AGG | 0.595672 | tig0020612:-111149 | None:intergenic |
| GTCAAGTATCGGCCATGTCG+GGG | 0.598025 | tig0020612:-110660 | None:intergenic |
| CTGATTTCTGCAACTATGAG+CGG | 0.598763 | tig0020612:+110429 | Msa1383820:CDS |
| AGCAGAGTACCAACAATACC+AGG | 0.600651 | tig0020612:+111004 | Msa1383820:CDS |
| GCGGGGTTACATGTTGTCTG+AGG | 0.600876 | tig0020612:+110448 | Msa1383820:CDS |
| AGTCAGTTCCGGGACAGTAA+GGG | 0.601789 | tig0020612:-110595 | None:intergenic |
| GAAATGATACTCAATTGGAA+AGG | 0.601847 | tig0020612:+108024 | Msa1383820:CDS |
| GGACGAAAGATCTTACCAAA+CGG | 0.603254 | tig0020612:-108146 | None:intergenic |
| GGAACTGACTCAACAAATGT+GGG | 0.606867 | tig0020612:+110608 | Msa1383820:CDS |
| ACAATGAAGCTTCTGGTGGT+AGG | 0.609506 | tig0020612:+108060 | Msa1383820:CDS |
| GCCAAAGGTCATTATACCGA+AGG | 0.611568 | tig0020612:+108212 | Msa1383820:CDS |
| TCATAGTTGCAGAAATCAGA+TGG | 0.613887 | tig0020612:-110425 | None:intergenic |
| AACAAAAGAATATGATTGAG+CGG | 0.615012 | tig0020612:-107816 | None:intergenic |
| GAGCGGTTCCAATCGAAGAG+AGG | 0.617083 | tig0020612:-107799 | None:intergenic |
| CACGTTCAAGGTGGCCAATG+CGG | 0.629178 | tig0020612:+107918 | Msa1383820:CDS |
| ACTGGAAAATATGTAAGCGA+AGG | 0.632683 | tig0020612:+107999 | Msa1383820:CDS |
| CAAAGACAAAGCGAATAGGT+AGG | 0.633490 | tig0020612:-111366 | None:intergenic |
| TGTGCTGCTGATCCCCGACA+TGG | 0.635297 | tig0020612:+110648 | Msa1383820:CDS |
| TGGAAAGAGAGGGAAATGCG+GGG | 0.638492 | tig0020612:-107758 | None:intergenic |
| AGGAAAGATGAGCACCAAAG+AGG | 0.640000 | tig0020612:+110701 | Msa1383820:CDS |
| TGAGACCCACGAGAAGTGAG+AGG | 0.646294 | tig0020612:-110561 | None:intergenic |
| TGAATGCGTCCTGTCAGACA+GGG | 0.651862 | tig0020612:+111270 | Msa1383820:three_prime_UTR |
| ATTGATATCAAAGATTAGGG+AGG | 0.653042 | tig0020612:+110103 | Msa1383820:CDS |
| GATTTCTGCAACTATGAGCG+GGG | 0.659247 | tig0020612:+110431 | Msa1383820:CDS |
| GGAAAGAGAGGGAAATGCGG+GGG | 0.664393 | tig0020612:-107757 | None:intergenic |
| ATACCAGGATGCAATAGCTG+AGG | 0.682886 | tig0020612:+111019 | Msa1383820:CDS |
| GAGGTGATACTTACAGCTAG+GGG | 0.687744 | tig0020612:-110309 | None:intergenic |
| GTAGCTGGATCAAACTATCG+GGG | 0.708017 | tig0020612:+111088 | Msa1383820:exon |
| GAGGTGATATGCGATGAACA+CGG | 0.708035 | tig0020612:+107966 | Msa1383820:CDS |
| GAGATCTTGCACGTTCAAGG+TGG | 0.713098 | tig0020612:+107909 | Msa1383820:CDS |
| TATTACAATGAAGCTTCTGG+TGG | 0.730410 | tig0020612:+108056 | Msa1383820:CDS |
| AATTGGATCCAAATTCTGGG+AGG | 0.748217 | tig0020612:+107947 | Msa1383820:CDS |
| GGATGAGATGGAGTTCACGG+AGG | 0.764427 | tig0020612:+110956 | Msa1383820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATTTATAAAAT+AGG | + | tig0020612:108840-108859 | Msa1383820:intron | 0.0% |
| !!! | ATTTTTATTTTGTTTTGTTT+TGG | - | tig0020612:107704-107723 | None:intergenic | 10.0% |
| !!! | GAAAAATAATAACTTTTTTT+TGG | - | tig0020612:108944-108963 | None:intergenic | 10.0% |
| !!! | AGAACTAATTTTTATAAAAA+TGG | + | tig0020612:109121-109140 | Msa1383820:intron | 10.0% |
| !!! | CATAAAATCTATTTTTTTAA+AGG | + | tig0020612:109225-109244 | Msa1383820:intron | 10.0% |
| !!! | TTTTTGTGTAATAATAATGA+TGG | + | tig0020612:108660-108679 | Msa1383820:intron | 15.0% |
| !!! | TAATAATGATGGTATATTTT+AGG | + | tig0020612:108671-108690 | Msa1383820:intron | 15.0% |
| !!! | AATAATGATGGTATATTTTA+GGG | + | tig0020612:108672-108691 | Msa1383820:intron | 15.0% |
| !! | AGCAATTATAAAAAAAGTAA+AGG | - | tig0020612:109264-109283 | None:intergenic | 15.0% |
| !! | TATTATTACACAAAAAGTCA+CGG | - | tig0020612:108656-108675 | None:intergenic | 20.0% |
| !!! | AATGGTTTTTTATGAATAGT+AGG | + | tig0020612:109139-109158 | Msa1383820:intron | 20.0% |
| !! | TTCTACCAAAAAAAAAATCA+TGG | + | tig0020612:109352-109371 | Msa1383820:intron | 20.0% |
| !! | AATTCCAATGTTTGTAAAAA+TGG | - | tig0020612:109410-109429 | None:intergenic | 20.0% |
| !! | AAAAAGAACAATATATTTCG+TGG | - | tig0020612:109497-109516 | None:intergenic | 20.0% |
| !!! | AAATTTCATTCAATTTTGTC+AGG | + | tig0020612:110026-110045 | Msa1383820:intron | 20.0% |
| !! | TCTATTGATATCAAAGATTA+GGG | + | tig0020612:110100-110119 | Msa1383820:CDS | 20.0% |
| !! | GTATAGTAATAAAACCATTA+GGG | - | tig0020612:111119-111138 | None:intergenic | 20.0% |
| !! | TGTATAGTAATAAAACCATT+AGG | - | tig0020612:111120-111139 | None:intergenic | 20.0% |
| !! | AAGAATAAAAGAAAAGCTTA+TGG | - | tig0020612:111174-111193 | None:intergenic | 20.0% |
| !! | TATTACACTTCAAATGAAAT+TGG | - | tig0020612:111223-111242 | None:intergenic | 20.0% |
| ! | AACAAATGAAATGAAACGAA+CGG | + | tig0020612:107676-107695 | Msa1383820:five_prime_UTR | 25.0% |
| !! | TTAATATGGTAATAATGGAG+GGG | - | tig0020612:107737-107756 | None:intergenic | 25.0% |
| !! | GTTAATATGGTAATAATGGA+GGG | - | tig0020612:107738-107757 | None:intergenic | 25.0% |
| ! | GATTTATTTATGGAAAGAGA+GGG | - | tig0020612:107771-107790 | None:intergenic | 25.0% |
| ! | AGATTTATTTATGGAAAGAG+AGG | - | tig0020612:107772-107791 | None:intergenic | 25.0% |
| ! | AACAAAAGAATATGATTGAG+CGG | - | tig0020612:107819-107838 | None:intergenic | 25.0% |
| ! | AAGATGAAGAATGAGATTTA+GGG | - | tig0020612:107878-107897 | None:intergenic | 25.0% |
| !! | AGAGGATCTAATTCAATTTT+TGG | + | tig0020612:108531-108550 | Msa1383820:intron | 25.0% |
| !! | GAGGATCTAATTCAATTTTT+GGG | + | tig0020612:108532-108551 | Msa1383820:intron | 25.0% |
| ! | TCATTCTGAGTACAAAATAT+AGG | - | tig0020612:108628-108647 | None:intergenic | 25.0% |
| ! | TTGATATGTCAGATATGATA+CGG | + | tig0020612:108696-108715 | Msa1383820:intron | 25.0% |
| ! | ATGCACTACTATAAAAGATA+AGG | - | tig0020612:108815-108834 | None:intergenic | 25.0% |
| ! | TTAAATAAAACATACCGACA+TGG | + | tig0020612:108885-108904 | Msa1383820:intron | 25.0% |
| ! | GAAAAAAATCTGAATCAAAC+GGG | - | tig0020612:108922-108941 | None:intergenic | 25.0% |
| ! | GGAAAAAAATCTGAATCAAA+CGG | - | tig0020612:108923-108942 | None:intergenic | 25.0% |
| !! | TCATTTCAAAGTGTTTGTTT+AGG | + | tig0020612:108982-109001 | Msa1383820:intron | 25.0% |
| !! | GCTAATAGCTTTTCATTTTA+AGG | - | tig0020612:109049-109068 | None:intergenic | 25.0% |
| ! | TGCCAAAAGAAAAATAATAC+CGG | - | tig0020612:109331-109350 | None:intergenic | 25.0% |
| !!! | TTTTTAAGAAAGTAGACTGA+AGG | + | tig0020612:109594-109613 | Msa1383820:intron | 25.0% |
| !!! | TTTTAAGAAAGTAGACTGAA+GGG | + | tig0020612:109595-109614 | Msa1383820:intron | 25.0% |
| ! | AATAGAGAGAAAATCTTATG+TGG | + | tig0020612:109674-109693 | Msa1383820:intron | 25.0% |
| ! | TTTGTAATATGTCACAGAAT+TGG | + | tig0020612:109906-109925 | Msa1383820:intron | 25.0% |
| ! | TGATCTTTATGTTAGATTTG+TGG | + | tig0020612:109964-109983 | Msa1383820:intron | 25.0% |
| ! | CTCTATTGATATCAAAGATT+AGG | + | tig0020612:110099-110118 | Msa1383820:CDS | 25.0% |
| ! | ATTCTTCATACTTTGTTGAA+TGG | + | tig0020612:110757-110776 | Msa1383820:CDS | 25.0% |
| !!! | GAATACATTCATAGCTTTAT+AGG | - | tig0020612:111317-111336 | None:intergenic | 25.0% |
| ! | AGCTGGAAAAAAAAAATGTA+TGG | + | tig0020612:111478-111497 | Msa1383820:three_prime_UTR | 25.0% |
| ! | TTGAGAAGATAATCAAAAAG+TGG | + | tig0020612:111523-111542 | Msa1383820:three_prime_UTR | 25.0% |
| GGTTAATATGGTAATAATGG+AGG | - | tig0020612:107739-107758 | None:intergenic | 30.0% | |
| GGGACAGATAGATTTATTTA+TGG | - | tig0020612:107781-107800 | None:intergenic | 30.0% | |
| TTTGGGGAAATGAAATGAAA+TGG | - | tig0020612:107846-107865 | None:intergenic | 30.0% | |
| GAAGATGAAGAATGAGATTT+AGG | - | tig0020612:107879-107898 | None:intergenic | 30.0% | |
| GAAATGATACTCAATTGGAA+AGG | + | tig0020612:108024-108043 | Msa1383820:CDS | 30.0% | |
| CTCAATTGTGATTAATGTCT+TGG | + | tig0020612:108329-108348 | Msa1383820:intron | 30.0% | |
| CAGAGGTTAATGATACATAA+AGG | + | tig0020612:108449-108468 | Msa1383820:intron | 30.0% | |
| TACTTCAATTACTATACTGC+AGG | - | tig0020612:108482-108501 | None:intergenic | 30.0% | |
| ! | GAAACATGATGATGATTGAA+AGG | + | tig0020612:108773-108792 | Msa1383820:intron | 30.0% |
| CACTACTATAAAAGATAAGG+TGG | - | tig0020612:108812-108831 | None:intergenic | 30.0% | |
| !! | GACCGGTATTATTTTTCTTT+TGG | + | tig0020612:109326-109345 | Msa1383820:intron | 30.0% |
| !!! | ACGTGCCATGATTTTTTTTT+TGG | - | tig0020612:109360-109379 | None:intergenic | 30.0% |
| CCAATGTTTGTAAAAATGGT+TGG | - | tig0020612:109406-109425 | None:intergenic | 30.0% | |
| !! | CCAACCATTTTTACAAACAT+TGG | + | tig0020612:109403-109422 | Msa1383820:intron | 30.0% |
| ! | TACATTGGTTATTCTACAGA+TGG | - | tig0020612:109471-109490 | None:intergenic | 30.0% |
| TATATTTCGTGGATCTACAT+TGG | - | tig0020612:109486-109505 | None:intergenic | 30.0% | |
| AGTGTTTCTCAACAATAGAA+TGG | + | tig0020612:109855-109874 | Msa1383820:intron | 30.0% | |
| GTGTTTCTCAACAATAGAAT+GGG | + | tig0020612:109856-109875 | Msa1383820:intron | 30.0% | |
| TGTTTCTCAACAATAGAATG+GGG | + | tig0020612:109857-109876 | Msa1383820:intron | 30.0% | |
| ATTGATATCAAAGATTAGGG+AGG | + | tig0020612:110103-110122 | Msa1383820:CDS | 30.0% | |
| ACAGATAGTGTAGCATTATA+TGG | - | tig0020612:110200-110219 | None:intergenic | 30.0% | |
| TCAGTACCTCAATTAATCAA+AGG | + | tig0020612:110339-110358 | Msa1383820:intron | 30.0% | |
| AGACAACCTTTGATTAATTG+AGG | - | tig0020612:110348-110367 | None:intergenic | 30.0% | |
| AGAGAGTAACATGAATGATT+TGG | + | tig0020612:110980-110999 | Msa1383820:CDS | 30.0% | |
| GAAGATGATTATGAAGAAGA+AGG | + | tig0020612:111044-111063 | Msa1383820:CDS | 30.0% | |
| TGATTATCTTCTCAACCAAA+CGG | - | tig0020612:111518-111537 | None:intergenic | 30.0% | |
| GGGGGTTAATATGGTAATAA+TGG | - | tig0020612:107742-107761 | None:intergenic | 35.0% | |
| !! | ATTTAGGGTTTGGTGTGTTT+GGG | - | tig0020612:107863-107882 | None:intergenic | 35.0% |
| ! | GAAGAATGAGATTTAGGGTT+TGG | - | tig0020612:107873-107892 | None:intergenic | 35.0% |
| ACCAAATTGGATCCAAATTC+TGG | + | tig0020612:107943-107962 | Msa1383820:CDS | 35.0% | |
| CCAAATTGGATCCAAATTCT+GGG | + | tig0020612:107944-107963 | Msa1383820:CDS | 35.0% | |
| ! | TCGCTTACATATTTTCCAGT+TGG | - | tig0020612:107999-108018 | None:intergenic | 35.0% |
| ACTGGAAAATATGTAAGCGA+AGG | + | tig0020612:107999-108018 | Msa1383820:CDS | 35.0% | |
| AGGTGGAAATGATACTCAAT+TGG | + | tig0020612:108019-108038 | Msa1383820:CDS | 35.0% | |
| GTGTATTACAATGAAGCTTC+TGG | + | tig0020612:108053-108072 | Msa1383820:CDS | 35.0% | |
| TATTACAATGAAGCTTCTGG+TGG | + | tig0020612:108056-108075 | Msa1383820:CDS | 35.0% | |
| !! | AATCTGGTGCTGGTAATAAT+TGG | + | tig0020612:108189-108208 | Msa1383820:CDS | 35.0% |
| !! | ATCTGGTGCTGGTAATAATT+GGG | + | tig0020612:108190-108209 | Msa1383820:CDS | 35.0% |
| AATCGTCACGATTTCAATCA+TGG | - | tig0020612:108429-108448 | None:intergenic | 35.0% | |
| ATACCGACATGGAGTATATA+GGG | + | tig0020612:108896-108915 | Msa1383820:intron | 35.0% | |
| ATTGCTTGTAGTCACAGAAA+TGG | + | tig0020612:109278-109297 | Msa1383820:intron | 35.0% | |
| TTGCTTGTAGTCACAGAAAT+GGG | + | tig0020612:109279-109298 | Msa1383820:intron | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | + | tig0020612:109698-109717 | Msa1383820:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | - | tig0020612:109818-109837 | None:intergenic | 35.0% | |
| AAGAGAGAAGATAGAGAAGA+GGG | + | tig0020612:109737-109756 | Msa1383820:intron | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | tig0020612:109818-109837 | Msa1383820:intron | 35.0% | |
| ATTGTTGAGAAACACTTGTG+TGG | - | tig0020612:109851-109870 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATTCTGTC+TGG | - | tig0020612:110134-110153 | None:intergenic | 35.0% | |
| AGAAAATGCAGATGAGTGTA+TGG | + | tig0020612:110232-110251 | Msa1383820:CDS | 35.0% | |
| CACTTTATGACATTTGCTTC+AGG | + | tig0020612:110270-110289 | Msa1383820:CDS | 35.0% | |
| !! | TTGAGGTACTGAAAAAGAAG+AGG | - | tig0020612:110331-110350 | None:intergenic | 35.0% |
| CTCATTGTGTAATTGCAGTT+GGG | + | tig0020612:110394-110413 | Msa1383820:intron | 35.0% | |
| TCATTGTGTAATTGCAGTTG+GGG | + | tig0020612:110395-110414 | Msa1383820:intron | 35.0% | |
| TCATAGTTGCAGAAATCAGA+TGG | - | tig0020612:110428-110447 | None:intergenic | 35.0% | |
| CCATAAAAAAGTGAAGACGA+GGG | - | tig0020612:110530-110549 | None:intergenic | 35.0% | |
| ACCATAAAAAAGTGAAGACG+AGG | - | tig0020612:110531-110550 | None:intergenic | 35.0% | |
| !!! | CGTCTTCACTTTTTTATGGT+TGG | + | tig0020612:110531-110550 | Msa1383820:CDS | 35.0% |
| ! | GATTTGTTCATCAACCTCTT+TGG | - | tig0020612:110718-110737 | None:intergenic | 35.0% |
| ACACTAGACTTCACATTGTT+GGG | - | tig0020612:110786-110805 | None:intergenic | 35.0% | |
| ACATCTTCAAATTCTTGGGT+GGG | - | tig0020612:110818-110837 | None:intergenic | 35.0% | |
| GACGACATCTTCAAATTCTT+GGG | - | tig0020612:110822-110841 | None:intergenic | 35.0% | |
| !! | AAGATGTCGTCCACTTTTAT+TGG | + | tig0020612:110831-110850 | Msa1383820:CDS | 35.0% |
| !! | AGATGTCGTCCACTTTTATT+GGG | + | tig0020612:110832-110851 | Msa1383820:CDS | 35.0% |
| AGTTGAGTTCCCAATAAAAG+TGG | - | tig0020612:110844-110863 | None:intergenic | 35.0% | |
| CTTCAATTCAGGAGATGTTT+AGG | + | tig0020612:110862-110881 | Msa1383820:CDS | 35.0% | |
| AATTCAGGAGATGTTTAGGA+GGG | + | tig0020612:110866-110885 | Msa1383820:CDS | 35.0% | |
| !! | CCTTTTTGCATTGGTATACT+GGG | + | tig0020612:110925-110944 | Msa1383820:CDS | 35.0% |
| !! | CTTTTTGCATTGGTATACTG+GGG | + | tig0020612:110926-110945 | Msa1383820:CDS | 35.0% |
| TGATTATGAAGAAGAAGGTG+AGG | + | tig0020612:111049-111068 | Msa1383820:CDS | 35.0% | |
| TTCTCAAAGACAAAGCGAAT+AGG | - | tig0020612:111373-111392 | None:intergenic | 35.0% | |
| ! | TCGCTTTGTCTTTGAGAAAA+TGG | + | tig0020612:111375-111394 | Msa1383820:three_prime_UTR | 35.0% |
| TTTGAGAAAATGGTTGCACT+TGG | + | tig0020612:111385-111404 | Msa1383820:three_prime_UTR | 35.0% | |
| TTCAAATGAAGCATGAGTCT+TGG | - | tig0020612:111458-111477 | None:intergenic | 35.0% | |
| ! | TATGGTAATAATGGAGGGGA+GGG | - | tig0020612:107733-107752 | None:intergenic | 40.0% |
| ! | ATATGGTAATAATGGAGGGG+AGG | - | tig0020612:107734-107753 | None:intergenic | 40.0% |
| TATGGAAAGAGAGGGAAATG+CGG | - | tig0020612:107763-107782 | None:intergenic | 40.0% | |
| !! | TTTAGGGTTTGGTGTGTTTG+GGG | - | tig0020612:107862-107881 | None:intergenic | 40.0% |
| !! | GATTTAGGGTTTGGTGTGTT+TGG | - | tig0020612:107864-107883 | None:intergenic | 40.0% |
| ATCCAATTTGGTTACCGCAT+TGG | - | tig0020612:107935-107954 | None:intergenic | 40.0% | |
| CCCAGAATTTGGATCCAATT+TGG | - | tig0020612:107947-107966 | None:intergenic | 40.0% | |
| AATTGGATCCAAATTCTGGG+AGG | + | tig0020612:107947-107966 | Msa1383820:CDS | 40.0% | |
| GGAAAATATGTAAGCGAAGG+TGG | + | tig0020612:108002-108021 | Msa1383820:CDS | 40.0% | |
| TGTTCCTAGAGCAGTTCTTA+TGG | + | tig0020612:108085-108104 | Msa1383820:CDS | 40.0% | |
| AGATCCATAAGAACTGCTCT+AGG | - | tig0020612:108092-108111 | None:intergenic | 40.0% | |
| GTTCTTATGGATCTTGAACC+TGG | + | tig0020612:108098-108117 | Msa1383820:CDS | 40.0% | |
| !! | ACCATGGAAAGTATCAGATC+TGG | + | tig0020612:108122-108141 | Msa1383820:CDS | 40.0% |
| ACCAGATCTGATACTTTCCA+TGG | - | tig0020612:108126-108145 | None:intergenic | 40.0% | |
| GGACGAAAGATCTTACCAAA+CGG | - | tig0020612:108149-108168 | None:intergenic | 40.0% | |
| CGTCCTGATAATTTCGTGTT+CGG | + | tig0020612:108164-108183 | Msa1383820:CDS | 40.0% | |
| TGTCCGAACACGAAATTATC+AGG | - | tig0020612:108170-108189 | None:intergenic | 40.0% | |
| AATTTCGTGTTCGGACAATC+TGG | + | tig0020612:108173-108192 | Msa1383820:CDS | 40.0% | |
| ACCTTCGGTATAATGACCTT+TGG | - | tig0020612:108216-108235 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | + | tig0020612:108281-108300 | Msa1383820:CDS | 40.0% | |
| TTGAAATCGTGACGATTCAG+AGG | + | tig0020612:108432-108451 | Msa1383820:intron | 40.0% | |
| ! | GTGCACTCTGAAAATTCTAG+AGG | + | tig0020612:108513-108532 | Msa1383820:intron | 40.0% |
| TCCTGACTTTCTGTAGATCT+TGG | + | tig0020612:108750-108769 | Msa1383820:intron | 40.0% | |
| CCTGACTTTCTGTAGATCTT+GGG | + | tig0020612:108751-108770 | Msa1383820:intron | 40.0% | |
| ! | ATGATGATTGAAAGGCATGC+AGG | + | tig0020612:108781-108800 | Msa1383820:intron | 40.0% |
| CATACCGACATGGAGTATAT+AGG | + | tig0020612:108895-108914 | Msa1383820:intron | 40.0% | |
| GAAAAATAATACCGGTCCGT+CGG | - | tig0020612:109323-109342 | None:intergenic | 40.0% | |
| AGTAGTGTTACACAGAGCTA+TGG | + | tig0020612:109627-109646 | Msa1383820:intron | 40.0% | |
| TATGGTCAAGGTTTCCTAAC+TGG | + | tig0020612:109645-109664 | Msa1383820:intron | 40.0% | |
| ATGGTCAAGGTTTCCTAACT+GGG | + | tig0020612:109646-109665 | Msa1383820:intron | 40.0% | |
| TCTCTATTGTTTGCCCAGTT+AGG | - | tig0020612:109662-109681 | None:intergenic | 40.0% | |
| ! | GTGGTCAAGACCAAGAATTT+TGG | + | tig0020612:109693-109712 | Msa1383820:intron | 40.0% |
| GAAGAGAGAAGATAGAGAAG+AGG | + | tig0020612:109736-109755 | Msa1383820:intron | 40.0% | |
| !!! | CTGGACCAAGAATTTTGGTT+TGG | - | tig0020612:109826-109845 | None:intergenic | 40.0% |
| CAAACCAAAATTCTTGGTCC+AGG | + | tig0020612:109824-109843 | Msa1383820:intron | 40.0% | |
| ! | TGTCAGATACCTTTGGAGAT+GGG | - | tig0020612:110166-110185 | None:intergenic | 40.0% |
| ACAACTGTGTCAGATACCTT+TGG | - | tig0020612:110173-110192 | None:intergenic | 40.0% | |
| ! | CATCTGCATTTTCTACCAGT+TGG | - | tig0020612:110226-110245 | None:intergenic | 40.0% |
| AGAGGTGATACTTACAGCTA+GGG | - | tig0020612:110313-110332 | None:intergenic | 40.0% | |
| AAGAGGTGATACTTACAGCT+AGG | - | tig0020612:110314-110333 | None:intergenic | 40.0% | |
| CCAACTGCAATTACACAATG+AGG | - | tig0020612:110396-110415 | None:intergenic | 40.0% | |
| CCTCATTGTGTAATTGCAGT+TGG | + | tig0020612:110393-110412 | Msa1383820:intron | 40.0% | |
| CTGATTTCTGCAACTATGAG+CGG | + | tig0020612:110429-110448 | Msa1383820:CDS | 40.0% | |
| TGATTTCTGCAACTATGAGC+GGG | + | tig0020612:110430-110449 | Msa1383820:CDS | 40.0% | |
| AGATCAGAGTTCAATTGACC+AGG | - | tig0020612:110477-110496 | None:intergenic | 40.0% | |
| GTCAATTGAACTCTGATCTC+AGG | + | tig0020612:110478-110497 | Msa1383820:CDS | 40.0% | |
| AAAAGTGAAGACGAGGGAAT+GGG | - | tig0020612:110524-110543 | None:intergenic | 40.0% | |
| AAAAAGTGAAGACGAGGGAA+TGG | - | tig0020612:110525-110544 | None:intergenic | 40.0% | |
| !!! | CCCTCGTCTTCACTTTTTTA+TGG | + | tig0020612:110527-110546 | Msa1383820:CDS | 40.0% |
| ! | ACATTTGTTGAGTCAGTTCC+GGG | - | tig0020612:110608-110627 | None:intergenic | 40.0% |
| ! | CACATTTGTTGAGTCAGTTC+CGG | - | tig0020612:110609-110628 | None:intergenic | 40.0% |
| ! | GGAACTGACTCAACAAATGT+GGG | + | tig0020612:110608-110627 | Msa1383820:CDS | 40.0% |
| AGCAGCACACATCATATTCT+TGG | - | tig0020612:110637-110656 | None:intergenic | 40.0% | |
| TTGCAGATGCAGTCAAGTAT+CGG | - | tig0020612:110674-110693 | None:intergenic | 40.0% | |
| CACACTAGACTTCACATTGT+TGG | - | tig0020612:110787-110806 | None:intergenic | 40.0% | |
| GACATCTTCAAATTCTTGGG+TGG | - | tig0020612:110819-110838 | None:intergenic | 40.0% | |
| GGACGACATCTTCAAATTCT+TGG | - | tig0020612:110823-110842 | None:intergenic | 40.0% | |
| TGGGAACTCAACTTCAATTC+AGG | + | tig0020612:110851-110870 | Msa1383820:CDS | 40.0% | |
| CAATTCAGGAGATGTTTAGG+AGG | + | tig0020612:110865-110884 | Msa1383820:CDS | 40.0% | |
| AGCAGTTTACTGCAATGTTC+CGG | + | tig0020612:110895-110914 | Msa1383820:CDS | 40.0% | |
| !! | GCCTTTTTGCATTGGTATAC+TGG | + | tig0020612:110924-110943 | Msa1383820:CDS | 40.0% |
| CCCAGTATACCAATGCAAAA+AGG | - | tig0020612:110928-110947 | None:intergenic | 40.0% | |
| AATGGATGAGATGGAGTTCA+CGG | + | tig0020612:110953-110972 | Msa1383820:CDS | 40.0% | |
| CTATTGCATCCTGGTATTGT+TGG | - | tig0020612:111016-111035 | None:intergenic | 40.0% | |
| AGAAGGTGAGGAACATTATG+AGG | + | tig0020612:111061-111080 | Msa1383820:CDS | 40.0% | |
| CAGTAGCTGGATCAAACTAT+CGG | + | tig0020612:111086-111105 | Msa1383820:exon | 40.0% | |
| AGTAGCTGGATCAAACTATC+GGG | + | tig0020612:111087-111106 | Msa1383820:exon | 40.0% | |
| GCTGTAGTAGATACACAGAT+AGG | - | tig0020612:111152-111171 | None:intergenic | 40.0% | |
| ATAGAATAACCCTGTCTGAC+AGG | - | tig0020612:111282-111301 | None:intergenic | 40.0% | |
| CAAAGACAAAGCGAATAGGT+AGG | - | tig0020612:111369-111388 | None:intergenic | 40.0% | |
| ATCGAGTGTAAAGCAAAGAC+AGG | - | tig0020612:111417-111436 | None:intergenic | 40.0% | |
| AAGCATGAGTCTTGGAGTAA+GGG | - | tig0020612:111450-111469 | None:intergenic | 40.0% | |
| CTCATGCTTCATTTGAAAGC+TGG | + | tig0020612:111461-111480 | Msa1383820:three_prime_UTR | 40.0% | |
| ATGGAAAGAGAGGGAAATGC+GGG | - | tig0020612:107762-107781 | None:intergenic | 45.0% | |
| TATCTGTCCCTCTCTTCGAT+TGG | + | tig0020612:107791-107810 | Msa1383820:five_prime_UTR | 45.0% | |
| AGAGAGATCTTGCACGTTCA+AGG | + | tig0020612:107906-107925 | Msa1383820:CDS | 45.0% | |
| GCATATCACCTCCCAGAATT+TGG | - | tig0020612:107958-107977 | None:intergenic | 45.0% | |
| GAGGTGATATGCGATGAACA+CGG | + | tig0020612:107966-107985 | Msa1383820:CDS | 45.0% | |
| ACAATGAAGCTTCTGGTGGT+AGG | + | tig0020612:108060-108079 | Msa1383820:CDS | 45.0% | |
| CTGATACTTTCCATGGTACC+AGG | - | tig0020612:108119-108138 | None:intergenic | 45.0% | |
| AGTATCAGATCTGGTCCGTT+TGG | + | tig0020612:108131-108150 | Msa1383820:CDS | 45.0% | |
| GCTGGTAATAATTGGGCCAA+AGG | + | tig0020612:108197-108216 | Msa1383820:CDS | 45.0% | |
| GCCAAAGGTCATTATACCGA+AGG | + | tig0020612:108212-108231 | Msa1383820:CDS | 45.0% | |
| GTCAATCAACTCAGCACCTT+CGG | - | tig0020612:108231-108250 | None:intergenic | 45.0% | |
| CCCAAGATCTACAGAAAGTC+AGG | - | tig0020612:108754-108773 | None:intergenic | 45.0% | |
| ! | ATGATTGAAAGGCATGCAGG+AGG | + | tig0020612:108784-108803 | Msa1383820:intron | 45.0% |
| ! | TGATTGAAAGGCATGCAGGA+GGG | + | tig0020612:108785-108804 | Msa1383820:intron | 45.0% |
| CCTATGATTACAACCACCGA+CGG | + | tig0020612:109304-109323 | Msa1383820:intron | 45.0% | |
| GTTACACAGAGCTATGGTCA+AGG | + | tig0020612:109633-109652 | Msa1383820:intron | 45.0% | |
| GAGAGAAGAGAAGAGAGAGA+AGG | + | tig0020612:109780-109799 | Msa1383820:intron | 45.0% | |
| ! | TGGACCTGGACCAAGAATTT+TGG | - | tig0020612:109831-109850 | None:intergenic | 45.0% |
| !! | TTTCAAGTTTGCCACTCCCT+TGG | + | tig0020612:110050-110069 | Msa1383820:CDS | 45.0% |
| ! | CTCTGTTTTCCCATCTCCAA+AGG | + | tig0020612:110154-110173 | Msa1383820:CDS | 45.0% |
| ! | GTGTCAGATACCTTTGGAGA+TGG | - | tig0020612:110167-110186 | None:intergenic | 45.0% |
| TACACTATCTGTCCACCAAC+TGG | + | tig0020612:110208-110227 | Msa1383820:CDS | 45.0% | |
| ! | CTGCATTTTCTACCAGTTGG+TGG | - | tig0020612:110223-110242 | None:intergenic | 45.0% |
| GAGGTGATACTTACAGCTAG+GGG | - | tig0020612:110312-110331 | None:intergenic | 45.0% | |
| GATTTCTGCAACTATGAGCG+GGG | + | tig0020612:110431-110450 | Msa1383820:CDS | 45.0% | |
| ! | ACATGTTGTCTGAGGTTTCC+TGG | + | tig0020612:110456-110475 | Msa1383820:CDS | 45.0% |
| GTATGTATCCCTTACTGTCC+CGG | + | tig0020612:110587-110606 | Msa1383820:CDS | 45.0% | |
| ! | CGGAACTGACTCAACAAATG+TGG | + | tig0020612:110607-110626 | Msa1383820:CDS | 45.0% |
| ACTGCATCTGCAATGTTCAG+AGG | + | tig0020612:110681-110700 | Msa1383820:CDS | 45.0% | |
| AGGAAAGATGAGCACCAAAG+AGG | + | tig0020612:110701-110720 | Msa1383820:CDS | 45.0% | |
| AATGCAAAAAGGCTTTGCGC+CGG | - | tig0020612:110917-110936 | None:intergenic | 45.0% | |
| ! | TTTGCATTGGTATACTGGGG+AGG | + | tig0020612:110929-110948 | Msa1383820:CDS | 45.0% |
| ! | TTGCATTGGTATACTGGGGA+GGG | + | tig0020612:110930-110949 | Msa1383820:CDS | 45.0% |
| ! | AGCAGAGTACCAACAATACC+AGG | + | tig0020612:111004-111023 | Msa1383820:CDS | 45.0% |
| ATACCAGGATGCAATAGCTG+AGG | + | tig0020612:111019-111038 | Msa1383820:CDS | 45.0% | |
| ACATTATGAGGAGCAGTAGC+TGG | + | tig0020612:111073-111092 | Msa1383820:exon | 45.0% | |
| GTAGCTGGATCAAACTATCG+GGG | + | tig0020612:111088-111107 | Msa1383820:exon | 45.0% | |
| TCTTGGAGTAAGGGACTTGA+TGG | - | tig0020612:111441-111460 | None:intergenic | 45.0% | |
| GAAGCATGAGTCTTGGAGTA+AGG | - | tig0020612:111451-111470 | None:intergenic | 45.0% | |
| ! | GTAATAATGGAGGGGAGGGA+TGG | - | tig0020612:107729-107748 | None:intergenic | 50.0% |
| GGGAAATGCGGGGGTTAATA+TGG | - | tig0020612:107751-107770 | None:intergenic | 50.0% | |
| TGGAAAGAGAGGGAAATGCG+GGG | - | tig0020612:107761-107780 | None:intergenic | 50.0% | |
| AGCGGTTCCAATCGAAGAGA+GGG | - | tig0020612:107801-107820 | None:intergenic | 50.0% | |
| GAGATCTTGCACGTTCAAGG+TGG | + | tig0020612:107909-107928 | Msa1383820:CDS | 50.0% | |
| GGCCAATGCGGTAACCAAAT+TGG | + | tig0020612:107930-107949 | Msa1383820:CDS | 50.0% | |
| !! | GAACACGGCATTGATCCAAC+TGG | + | tig0020612:107981-108000 | Msa1383820:CDS | 50.0% |
| GGATCTTGAACCTGGTACCA+TGG | + | tig0020612:108106-108125 | Msa1383820:CDS | 50.0% | |
| GGGCCCTATATACTCCATGT+CGG | - | tig0020612:108902-108921 | None:intergenic | 50.0% | |
| CCGTCGGTGGTTGTAATCAT+AGG | - | tig0020612:109307-109326 | None:intergenic | 50.0% | |
| AAATAATACCGGTCCGTCGG+TGG | - | tig0020612:109320-109339 | None:intergenic | 50.0% | |
| GAGAAACACTTGTGTGGACC+TGG | - | tig0020612:109845-109864 | None:intergenic | 50.0% | |
| GAACTCTGATCTCAGGAAGC+TGG | + | tig0020612:110485-110504 | Msa1383820:CDS | 50.0% | |
| TTTGCACCTCTCACTTCTCG+TGG | + | tig0020612:110555-110574 | Msa1383820:CDS | 50.0% | |
| TTGCACCTCTCACTTCTCGT+GGG | + | tig0020612:110556-110575 | Msa1383820:CDS | 50.0% | |
| AGTCAGTTCCGGGACAGTAA+GGG | - | tig0020612:110598-110617 | None:intergenic | 50.0% | |
| !! | AGTCAAGTATCGGCCATGTC+GGG | - | tig0020612:110664-110683 | None:intergenic | 50.0% |
| !! | CAGTCAAGTATCGGCCATGT+CGG | - | tig0020612:110665-110684 | None:intergenic | 50.0% |
| ! | GGCGCAAAGCCTTTTTGCAT+TGG | + | tig0020612:110916-110935 | Msa1383820:CDS | 50.0% |
| TTGGTATACTGGGGAGGGAA+TGG | + | tig0020612:110935-110954 | Msa1383820:CDS | 50.0% | |
| CTATCGGGGTAATGCCCTAA+TGG | + | tig0020612:111102-111121 | Msa1383820:three_prime_UTR | 50.0% | |
| TGAATGCGTCCTGTCAGACA+GGG | + | tig0020612:111270-111289 | Msa1383820:three_prime_UTR | 50.0% | |
| GAAATAGTGTGCACGCCGTT+TGG | + | tig0020612:111500-111519 | Msa1383820:three_prime_UTR | 50.0% | |
| GGAAAGAGAGGGAAATGCGG+GGG | - | tig0020612:107760-107779 | None:intergenic | 55.0% | |
| GAGCGGTTCCAATCGAAGAG+AGG | - | tig0020612:107802-107821 | None:intergenic | 55.0% | |
| CACGTTCAAGGTGGCCAATG+CGG | + | tig0020612:107918-107937 | Msa1383820:CDS | 55.0% | |
| GTGTTCGGACAATCTGGTGC+TGG | + | tig0020612:108179-108198 | Msa1383820:CDS | 55.0% | |
| GATTACAACCACCGACGGAC+CGG | + | tig0020612:109309-109328 | Msa1383820:intron | 55.0% | |
| CAAGTTTGCCACTCCCTTGG+AGG | + | tig0020612:110053-110072 | Msa1383820:CDS | 55.0% | |
| GCGGGGTTACATGTTGTCTG+AGG | + | tig0020612:110448-110467 | Msa1383820:CDS | 55.0% | |
| TGAGACCCACGAGAAGTGAG+AGG | - | tig0020612:110564-110583 | None:intergenic | 55.0% | |
| GAGTCAGTTCCGGGACAGTA+AGG | - | tig0020612:110599-110618 | None:intergenic | 55.0% | |
| !! | GTCAAGTATCGGCCATGTCG+GGG | - | tig0020612:110663-110682 | None:intergenic | 55.0% |
| TGGGGAGGGAATGGATGAGA+TGG | + | tig0020612:110944-110963 | Msa1383820:CDS | 55.0% | |
| GGATGAGATGGAGTTCACGG+AGG | + | tig0020612:110956-110975 | Msa1383820:CDS | 55.0% | |
| CCTCCTCAGCTATTGCATCC+TGG | - | tig0020612:111025-111044 | None:intergenic | 55.0% | |
| CCAGGATGCAATAGCTGAGG+AGG | + | tig0020612:111022-111041 | Msa1383820:CDS | 55.0% | |
| CTGAATGCGTCCTGTCAGAC+AGG | + | tig0020612:111269-111288 | Msa1383820:three_prime_UTR | 55.0% | |
| GTTTGCCACTCCCTTGGAGG+AGG | + | tig0020612:110056-110075 | Msa1383820:CDS | 60.0% | |
| AGAACCCGTGCCTCCTCCAA+GGG | - | tig0020612:110069-110088 | None:intergenic | 60.0% | |
| ! | TGTGCTGCTGATCCCCGACA+TGG | + | tig0020612:110648-110667 | Msa1383820:CDS | 60.0% |
| CCACTCCCTTGGAGGAGGCA+CGG | + | tig0020612:110061-110080 | Msa1383820:CDS | 65.0% | |
| ! | CACTCCCTTGGAGGAGGCAC+GGG | + | tig0020612:110062-110081 | Msa1383820:CDS | 65.0% |
| CAGAACCCGTGCCTCCTCCA+AGG | - | tig0020612:110070-110089 | None:intergenic | 65.0% | |
| ! | CTTGGAGGAGGCACGGGTTC+TGG | + | tig0020612:110068-110087 | Msa1383820:CDS | 65.0% |
| ! | AGGAGGCACGGGTTCTGGCA+TGG | + | tig0020612:110073-110092 | Msa1383820:CDS | 65.0% |
| ! | GGAGGCACGGGTTCTGGCAT+GGG | + | tig0020612:110074-110093 | Msa1383820:CDS | 65.0% |
| CCGTGCCTCCTCCAAGGGAG+TGG | - | tig0020612:110064-110083 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020612 | gene | 107667 | 111561 | 107667 | ID=Msa1383820;Name=Msa1383820 |
| tig0020612 | mRNA | 107667 | 111561 | 107667 | ID=Msa1383820-mRNA-1;Parent=Msa1383820;Name=Msa1383820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=236|1|1|1|1|1|3|470|449 |
| tig0020612 | exon | 107667 | 108302 | 107667 | ID=Msa1383820-mRNA-1:exon:8716;Parent=Msa1383820-mRNA-1 |
| tig0020612 | exon | 110048 | 110317 | 110048 | ID=Msa1383820-mRNA-1:exon:8717;Parent=Msa1383820-mRNA-1 |
| tig0020612 | exon | 110412 | 111561 | 110412 | ID=Msa1383820-mRNA-1:exon:8718;Parent=Msa1383820-mRNA-1 |
| tig0020612 | five_prime_UTR | 107667 | 107902 | 107667 | ID=Msa1383820-mRNA-1:five_prime_utr;Parent=Msa1383820-mRNA-1 |
| tig0020612 | CDS | 107903 | 108302 | 107903 | ID=Msa1383820-mRNA-1:cds;Parent=Msa1383820-mRNA-1 |
| tig0020612 | CDS | 110048 | 110317 | 110048 | ID=Msa1383820-mRNA-1:cds;Parent=Msa1383820-mRNA-1 |
| tig0020612 | CDS | 110412 | 111091 | 110412 | ID=Msa1383820-mRNA-1:cds;Parent=Msa1383820-mRNA-1 |
| tig0020612 | three_prime_UTR | 111092 | 111561 | 111092 | ID=Msa1383820-mRNA-1:three_prime_utr;Parent=Msa1383820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
