AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0525880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0525880 MtrunA17_Chr7g0272641 100.000 78 0 0 1 78 1 78 3.85e-49 164
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0525880 AT3G05420.2 73.333 75 20 0 3 77 1 75 6.64e-34 122
Msa0525880 AT3G05420.1 73.333 75 20 0 3 77 1 75 6.96e-34 122
Msa0525880 AT5G27630.3 71.233 73 21 0 5 77 4 76 5.44e-31 114
Msa0525880 AT5G27630.4 71.233 73 21 0 5 77 4 76 6.02e-31 114
Msa0525880 AT5G27630.1 71.233 73 21 0 5 77 4 76 6.20e-31 114
Msa0525880 AT5G27630.2 71.233 73 21 0 5 77 4 76 7.79e-31 114

Find 194 sgRNAs with CRISPR-Local

Find 622 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGAAGAGCGGTGGATTT+AGG 0.146379 3_4:-79532522 None:intergenic
GGTCAGAAGCTCCAAAATTT+TGG 0.162657 3_4:+79541201 Msa0525880:three_prime_UTR
GAAGAAGAGCGGTGGATTTA+GGG 0.181306 3_4:-79532521 None:intergenic
ATCCATGTTATGTTATTTAT+TGG 0.192924 3_4:-79532160 None:intergenic
AATAAGATTTAGCTTCTATT+TGG 0.195736 3_4:+79541471 Msa0525880:three_prime_UTR
TTTGTAATGTTCCAAAATTT+TGG 0.220477 3_4:-79541212 None:intergenic
CGGGTAGCATTTGTAGCATT+TGG 0.236529 3_4:-79539379 None:intergenic
GTGTTCCCATTCTCAATTAC+TGG 0.248320 3_4:-79534862 None:intergenic
GACCGATACTTACTTATCTT+TGG 0.248494 3_4:+79537269 Msa0525880:three_prime_UTR
AAAACTATTTCCTCTGAAAA+TGG 0.248717 3_4:+79534898 Msa0525880:three_prime_UTR
GGCGTGTGGGGTTGGCTTGC+CGG 0.253275 3_4:+79541315 Msa0525880:three_prime_UTR
CTTGAATGACCTGCATATTC+TGG 0.261804 3_4:+79536893 Msa0525880:three_prime_UTR
AGGACATGAAGGGAAAATTT+TGG 0.262823 3_4:+79539426 Msa0525880:three_prime_UTR
TTCATTTGAACGTCTATTAC+AGG 0.265735 3_4:-79534328 None:intergenic
TTCATTCATCATCTGCATTC+TGG 0.278937 3_4:-79541347 None:intergenic
AAAACCTCATATCGGGCTTT+TGG 0.290754 3_4:-79535021 None:intergenic
CGCGATACAGGATCTGAATT+TGG 0.295314 3_4:+79539400 Msa0525880:three_prime_UTR
CAAGATAAATTGTACATATA+TGG 0.314234 3_4:+79535159 Msa0525880:three_prime_UTR
GTTCTTCTCTCTCAGCCTTC+AGG 0.316569 3_4:-79540090 None:intergenic
TTTGGACGTTGACCAGATAT+TGG 0.327554 3_4:-79535003 None:intergenic
CTGAACAACAATGCTTCATT+TGG 0.327692 3_4:+79541381 Msa0525880:three_prime_UTR
TCCATGTGCTGGCCATTCTT+TGG 0.327874 3_4:+79535510 Msa0525880:three_prime_UTR
GAAGATGTACTTGTATCTTT+TGG 0.331794 3_4:+79539153 Msa0525880:three_prime_UTR
AAGAGATTTAGTTGGAGAAT+TGG 0.336776 3_4:-79532487 None:intergenic
CTCAATTACTGGTTCAACTT+TGG 0.347352 3_4:-79534851 None:intergenic
CGACGAGTCCTCTACAACTT+TGG 0.350805 3_4:+79535486 Msa0525880:three_prime_UTR
GGGTAGCATTTGTAGCATTT+GGG 0.363871 3_4:-79539378 None:intergenic
GTCATTACAGGGCTTGAGTT+TGG 0.367865 3_4:+79539110 Msa0525880:intron
TATTATACCTTGGATACTTT+CGG 0.369378 3_4:-79535692 None:intergenic
TCTTCAATTCAAACTTAACT+TGG 0.369386 3_4:-79532334 None:intergenic
CAGGTGGAGGTTGCTGAATT+AGG 0.373715 3_4:+79541180 Msa0525880:intron
ATAAGATTTAGCTTCTATTT+GGG 0.375495 3_4:+79541472 Msa0525880:three_prime_UTR
TGCAAGGTCGATTTGTGGCT+TGG 0.377894 3_4:-79539310 None:intergenic
GCCGCAGCGTAGAACCGTTC+TGG 0.381048 3_4:-79532441 None:intergenic
GACTGATATGAGATCACCTT+TGG 0.382324 3_4:-79540068 None:intergenic
GCTCAGGTGGCGTGTGGGGT+TGG 0.389166 3_4:+79541307 Msa0525880:three_prime_UTR
TCTCTATAGCTTATATCAAC+AGG 0.390597 3_4:+79532542 Msa0525880:CDS
TTATTGTGTATTAATTAATT+CGG 0.398423 3_4:+79541432 Msa0525880:three_prime_UTR
AGAGACGGTTGTACTGAATA+TGG 0.398869 3_4:+79538910 Msa0525880:three_prime_UTR
TGGATTGCACCTCCAATATC+TGG 0.399536 3_4:+79534991 Msa0525880:three_prime_UTR
GGTTGGCTTGCCGGTACTCC+TGG 0.400632 3_4:+79541324 Msa0525880:three_prime_UTR
TTAGATGTAAGAGATTTAGT+TGG 0.402954 3_4:-79532495 None:intergenic
TTGGTCAAAGCTTGAGGTTA+AGG 0.406832 3_4:+79535459 Msa0525880:three_prime_UTR
GATGTTGTTATGGAAGGCTT+TGG 0.411884 3_4:+79534946 Msa0525880:three_prime_UTR
ACATCCCAGAACCCAGTTCA+TGG 0.419192 3_4:+79533597 Msa0525880:CDS
TTGGTTGTAAGTTCATATAA+TGG 0.423699 3_4:+79539129 Msa0525880:three_prime_UTR
AATAAGCTCCTGTCAATTGC+CGG 0.431161 3_4:+79535652 Msa0525880:three_prime_UTR
ACAAATGCTACCCGCGATAC+AGG 0.439068 3_4:+79539388 Msa0525880:three_prime_UTR
CAGCGGTATGATCAGACCTT+GGG 0.439160 3_4:-79537235 None:intergenic
TGGTCAACTCTAAAGACCTA+TGG 0.439756 3_4:+79536184 Msa0525880:three_prime_UTR
GCGATGGCGAGAGCAAGTTC+TGG 0.441233 3_4:+79532408 Msa0525880:CDS
GCAGGGCTCAGGTGGCGTGT+GGG 0.442660 3_4:+79541302 Msa0525880:three_prime_UTR
TGCATTCTGGCCAGGAGTAC+CGG 0.445380 3_4:-79541334 None:intergenic
CGATACTTACTTATCTTTGG+AGG 0.449279 3_4:+79537272 Msa0525880:three_prime_UTR
GTTGAACCAGTAATTGAGAA+TGG 0.449496 3_4:+79534856 Msa0525880:three_prime_UTR
ATGGAAGGCTTTGGTTCAGT+TGG 0.450341 3_4:+79534955 Msa0525880:three_prime_UTR
ACAGGATAAAGATGTTGTTA+TGG 0.450800 3_4:+79534936 Msa0525880:three_prime_UTR
GCCAATCAGTGTCCCTTGTC+GGG 0.450997 3_4:+79536826 Msa0525880:three_prime_UTR
CAAGAGCCAAAACCTCATAT+CGG 0.452451 3_4:-79535029 None:intergenic
CGAGCTGACCACGTACTGAT+TGG 0.453315 3_4:-79540595 None:intergenic
GTGTGACAGTAGGGGAGAAC+TGG 0.456299 3_4:+79537492 Msa0525880:three_prime_UTR
TGCGGCATCTTACGTCGGTT+TGG 0.458181 3_4:+79532458 Msa0525880:CDS
TTGTGTGGCCGGCAATTGAC+AGG 0.459083 3_4:-79535660 None:intergenic
GGCAGGGCTCAGGTGGCGTG+TGG 0.462148 3_4:+79541301 Msa0525880:three_prime_UTR
GTTTAATACAAACCAAAGAA+TGG 0.462569 3_4:-79535522 None:intergenic
AGCTCGCTGCTGAGCAGTCA+AGG 0.464648 3_4:+79540612 Msa0525880:three_prime_UTR
TTTAAGTGCAAAACAGAGGC+AGG 0.465741 3_4:+79541284 Msa0525880:three_prime_UTR
TGGATTTGAGAAGCTGGACT+TGG 0.465890 3_4:+79535440 Msa0525880:three_prime_UTR
GGGGAGAACTGGTTCATTGT+TGG 0.466702 3_4:+79537503 Msa0525880:three_prime_UTR
CAGTTGGAGTCTATGATCAA+TGG 0.467355 3_4:+79534971 Msa0525880:three_prime_UTR
TGACCTGCATATTCTGGACT+TGG 0.470489 3_4:+79536899 Msa0525880:three_prime_UTR
TGAACTCCTCCAGCGGCAAA+AGG 0.472639 3_4:+79541242 Msa0525880:three_prime_UTR
TCTGAAAATGGAAATCAAGT+TGG 0.477894 3_4:+79534910 Msa0525880:three_prime_UTR
GGCCAATCAGTGTCCCTTGT+CGG 0.478649 3_4:+79536825 Msa0525880:three_prime_UTR
ATCAATTTCGTCCCATGTCA+TGG 0.481723 3_4:-79536925 None:intergenic
ATGTTACCACTGACCAAGCC+AGG 0.482985 3_4:-79538937 None:intergenic
AAATTGTGGAGCATAGCAAA+TGG 0.484561 3_4:+79533621 Msa0525880:CDS
GCATGTCCTGCACGTGGCGT+TGG 0.486099 3_4:-79537467 None:intergenic
TCCCGACAAGGGACACTGAT+TGG 0.489111 3_4:-79536827 None:intergenic
GCATCTTACGTCGGTTTGGA+TGG 0.491314 3_4:+79532462 Msa0525880:CDS
TGGATTGCAAGGTCGATTTG+TGG 0.491543 3_4:-79539315 None:intergenic
GACATGCTGGTGTGACAGTA+GGG 0.492988 3_4:+79537483 Msa0525880:three_prime_UTR
CTGGGTTCTGGGATGTTACA+AGG 0.494600 3_4:-79533590 None:intergenic
GATACTTACTTATCTTTGGA+GGG 0.495002 3_4:+79537273 Msa0525880:three_prime_UTR
CAGGGCTCAGGTGGCGTGTG+GGG 0.498458 3_4:+79541303 Msa0525880:three_prime_UTR
CTTCAATTCAAACTTAACTT+GGG 0.499993 3_4:-79532333 None:intergenic
ACTAGAATCATCACTCAGTA+AGG 0.502282 3_4:+79540111 Msa0525880:three_prime_UTR
GCAAAACAGAGGCAGGGCTC+AGG 0.503036 3_4:+79541291 Msa0525880:three_prime_UTR
CATAATATTATTATTAGTTG+AGG 0.508426 3_4:+79532273 Msa0525880:five_prime_UTR
TCATCATCTGCATTCTGGCC+AGG 0.509974 3_4:-79541342 None:intergenic
TTGAACCAGTAATTGAGAAT+GGG 0.511798 3_4:+79534857 Msa0525880:three_prime_UTR
GGCAGAAACACTGTCTGGTA+TGG 0.512137 3_4:-79539353 None:intergenic
TACTTACTTATCTTTGGAGG+GGG 0.514190 3_4:+79537275 Msa0525880:three_prime_UTR
TAAAAGTAGTTACCTTGTAA+AGG 0.514368 3_4:-79540195 None:intergenic
TTCTGCAGGGGCTTCAGAGA+CGG 0.519356 3_4:+79538895 Msa0525880:intron
TGAATATGGCTACCCTGGCT+TGG 0.523714 3_4:+79538924 Msa0525880:three_prime_UTR
TCAGTGGTAACATCTGTTCA+AGG 0.525727 3_4:+79538947 Msa0525880:three_prime_UTR
CATGAAGATCACTAAGATAA+CGG 0.527182 3_4:-79535197 None:intergenic
GAGAACTGGTTCATTGTTGG+TGG 0.528590 3_4:+79537506 Msa0525880:three_prime_UTR
AACTGGTTCATTGTTGGTGG+CGG 0.528677 3_4:+79537509 Msa0525880:three_prime_UTR
TGGAATCTCACCTTGTTGTG+TGG 0.532017 3_4:-79537447 None:intergenic
CTATGTCACTACAGATTGCA+TGG 0.533076 3_4:+79535626 Msa0525880:intron
GAATTTGGAGCAGGACATGA+AGG 0.533920 3_4:+79539415 Msa0525880:three_prime_UTR
GTCAAGGTGTTTCAAACTTG+AGG 0.536182 3_4:+79540628 Msa0525880:three_prime_UTR
AAGAGCCAAAACCTCATATC+GGG 0.537648 3_4:-79535028 None:intergenic
ATCAGAAATGTCGATGGCGA+TGG 0.538481 3_4:+79532392 Msa0525880:exon
GAGATTCCAACGCCACGTGC+AGG 0.540331 3_4:+79537461 Msa0525880:three_prime_UTR
GGTCAACTCTAAAGACCTAT+GGG 0.540486 3_4:+79536185 Msa0525880:three_prime_UTR
GCGTGTTTCTGTTGCTAGTG+AGG 0.541577 3_4:+79538970 Msa0525880:three_prime_UTR
AATTGTGGAGCATAGCAAAT+GGG 0.542441 3_4:+79533622 Msa0525880:CDS
TTTAGCTTCTATTTGGGCGG+AGG 0.543422 3_4:+79541478 Msa0525880:three_prime_UTR
TGGAGCATAGCAAATGGGCC+AGG 0.543498 3_4:+79533627 Msa0525880:CDS
TCAAAGCTTGAGGTTAAGGC+TGG 0.545236 3_4:+79535463 Msa0525880:three_prime_UTR
AAACAGAGGCAGGGCTCAGG+TGG 0.548572 3_4:+79541294 Msa0525880:three_prime_UTR
GGACGTTGACCAGATATTGG+AGG 0.551930 3_4:-79535000 None:intergenic
ACGTCCAAAAGCCCGATATG+AGG 0.553043 3_4:+79535017 Msa0525880:three_prime_UTR
GATAAAGATGTTGTTATGGA+AGG 0.553076 3_4:+79534940 Msa0525880:three_prime_UTR
CTGGACTTGGTCAAAGCTTG+AGG 0.558338 3_4:+79535453 Msa0525880:three_prime_UTR
AAATTCAGATCCTGTATCGC+GGG 0.560039 3_4:-79539398 None:intergenic
GCAGCGGTATGATCAGACCT+TGG 0.560127 3_4:-79537236 None:intergenic
GATAAATTGTACATATATGG+TGG 0.560376 3_4:+79535162 Msa0525880:three_prime_UTR
ACAGGATCTGAATTTGGAGC+AGG 0.561532 3_4:+79539406 Msa0525880:three_prime_UTR
TTGTCATTTCAGGCTAGTGT+AGG 0.561898 3_4:+79533566 Msa0525880:intron
ATGTAAATCATTGTAGCAAG+TGG 0.562384 3_4:-79537306 None:intergenic
ACAACTTTGGATCCATGTGC+TGG 0.563526 3_4:+79535499 Msa0525880:three_prime_UTR
ACGCCACGTGCAGGACATGC+TGG 0.566577 3_4:+79537470 Msa0525880:three_prime_UTR
ACCAAAGAATGGCCAGCACA+TGG 0.572956 3_4:-79535511 None:intergenic
ATACTTACTTATCTTTGGAG+GGG 0.575466 3_4:+79537274 Msa0525880:three_prime_UTR
GGCTACCCTGGCTTGGTCAG+TGG 0.575689 3_4:+79538931 Msa0525880:three_prime_UTR
CTCCAAAGATAAGTAAGTAT+CGG 0.576573 3_4:-79537271 None:intergenic
GCGGAGTGCCTCCTTCCCCA+AGG 0.579224 3_4:+79537219 Msa0525880:intron
GGGACGGCAGAAACACTGTC+TGG 0.580029 3_4:-79539358 None:intergenic
TGATCTCATATCAGTCCTGA+AGG 0.580681 3_4:+79540075 Msa0525880:three_prime_UTR
ATTGTTGTTCAGTTAAGCCA+AGG 0.581686 3_4:-79541370 None:intergenic
CTGGTTTGCAATATCCAGAA+CGG 0.583439 3_4:+79532427 Msa0525880:CDS
TATGTCACTACAGATTGCAT+GGG 0.589491 3_4:+79535627 Msa0525880:intron
TAATAACTCTGACCTTTACA+AGG 0.591192 3_4:+79540183 Msa0525880:three_prime_UTR
AGCCAATAAATAACATAACA+TGG 0.591206 3_4:+79532158 Msa0525880:five_prime_UTR
AAAGACCTATGGGAAACCTC+CGG 0.591743 3_4:+79536195 Msa0525880:three_prime_UTR
AGCATTTGTAGCATTTGGGA+CGG 0.593329 3_4:-79539374 None:intergenic
TCATACCGCTGCTGTACATG+TGG 0.596367 3_4:+79537247 Msa0525880:three_prime_UTR
ACCCAGTTCATGGAAAATTG+TGG 0.599258 3_4:+79533607 Msa0525880:CDS
TGATCAGACCTTGGGGAAGG+AGG 0.599374 3_4:-79537227 None:intergenic
GGAATCTCACCTTGTTGTGT+GGG 0.600090 3_4:-79537446 None:intergenic
TACGCTGCGGCATCTTACGT+CGG 0.601399 3_4:+79532453 Msa0525880:CDS
TCTTCAACTAAAGCAAGAGC+TGG 0.604945 3_4:+79540147 Msa0525880:three_prime_UTR
GATCCTTCCGAAAGTATCCA+AGG 0.604958 3_4:+79535685 Msa0525880:three_prime_UTR
GCTGATGACTGTATTCAAAG+TGG 0.605954 3_4:+79541564 Msa0525880:three_prime_UTR
CAGTGGTAACATCTGTTCAA+GGG 0.607684 3_4:+79538948 Msa0525880:three_prime_UTR
ATACCTTGGATACTTTCGGA+AGG 0.608008 3_4:-79535688 None:intergenic
GTTGTGTAGGAAGAAGATCC+TGG 0.609571 3_4:+79534271 Msa0525880:intron
GGACATGCTGGTGTGACAGT+AGG 0.609684 3_4:+79537482 Msa0525880:three_prime_UTR
TGGAAATCAAGTTGGAACAC+AGG 0.610735 3_4:+79534918 Msa0525880:three_prime_UTR
TGGACTTGGAAACCATGACA+TGG 0.612583 3_4:+79536913 Msa0525880:three_prime_UTR
TGTACTGAATATGGCTACCC+TGG 0.613350 3_4:+79538919 Msa0525880:three_prime_UTR
GCTATAGAGAAGAAGAGCGG+TGG 0.614400 3_4:-79532529 None:intergenic
TGCAGATGATGAATGAACCT+TGG 0.618446 3_4:+79541353 Msa0525880:three_prime_UTR
ACATGGATCCAAAGTTGTAG+AGG 0.619016 3_4:-79535494 None:intergenic
TTGGTGGGCAAGATGCAAAG+AGG 0.621524 3_4:+79536865 Msa0525880:three_prime_UTR
TGGTCTCGTCCCACACAACA+AGG 0.621932 3_4:+79537437 Msa0525880:three_prime_UTR
AGATTTAGCTTCTATTTGGG+CGG 0.624912 3_4:+79541475 Msa0525880:three_prime_UTR
TTTCCAAGTCCAGAATATGC+AGG 0.626613 3_4:-79536902 None:intergenic
ATAATAATCAGAAATGTCGA+TGG 0.631937 3_4:+79532386 Msa0525880:exon
GATGCTCTTGAATACCAACC+AGG 0.635858 3_4:-79534289 None:intergenic
GGTATCATACAGAAATCCAA+AGG 0.637667 3_4:+79540052 Msa0525880:intron
TGTAGGAAGAAGATCCTGGT+TGG 0.638077 3_4:+79534275 Msa0525880:intron
GTATGATCAGACCTTGGGGA+AGG 0.639783 3_4:-79537230 None:intergenic
ATTATAGTATGATATAGTGA+AGG 0.640204 3_4:+79541521 Msa0525880:three_prime_UTR
AAGGTCAGAGTTATTAGACT+CGG 0.646046 3_4:-79540176 None:intergenic
ACACCAGCATGTCCTGCACG+TGG 0.646357 3_4:-79537473 None:intergenic
GGACTTGGAAACCATGACAT+GGG 0.651250 3_4:+79536914 Msa0525880:three_prime_UTR
CAAATTCAGATCCTGTATCG+CGG 0.652255 3_4:-79539399 None:intergenic
TTAAGTGCAAAACAGAGGCA+GGG 0.653026 3_4:+79541285 Msa0525880:three_prime_UTR
CATACTATAATCCTCATGTG+TGG 0.653100 3_4:-79541509 None:intergenic
TACTAAGGTATTCCCGACAA+GGG 0.657707 3_4:-79536838 None:intergenic
TGTTACCACTGACCAAGCCA+GGG 0.658834 3_4:-79538936 None:intergenic
TTACTAAGGTATTCCCGACA+AGG 0.660142 3_4:-79536839 None:intergenic
ACATGCTGGTGTGACAGTAG+GGG 0.662631 3_4:+79537484 Msa0525880:three_prime_UTR
CTGCTTTAAGTGCAAAACAG+AGG 0.668188 3_4:+79541280 Msa0525880:three_prime_UTR
TTGATCTACAAAGAGCAACA+TGG 0.672957 3_4:+79536164 Msa0525880:three_prime_UTR
TCCAGAACGGTTCTACGCTG+CGG 0.674199 3_4:+79532440 Msa0525880:CDS
AATTTGGAGCAGGACATGAA+GGG 0.680238 3_4:+79539416 Msa0525880:three_prime_UTR
AGCGGTATGATCAGACCTTG+GGG 0.686103 3_4:-79537234 None:intergenic
ACATACCGGAGGTTTCCCAT+AGG 0.689171 3_4:-79536200 None:intergenic
TCGGTCCACATGTACAGCAG+CGG 0.693231 3_4:-79537252 None:intergenic
ATATATGGTGGAAATCACAA+TGG 0.695684 3_4:+79535174 Msa0525880:three_prime_UTR
TGTTGTATAAGAGTTATCCA+CGG 0.709908 3_4:-79539455 None:intergenic
TAGGAGCTCCAATCAGTACG+TGG 0.711841 3_4:+79540587 Msa0525880:intron
ATGTCACTACAGATTGCATG+GGG 0.712245 3_4:+79535628 Msa0525880:intron
TAAGCTATAGAGAAGAAGAG+CGG 0.722916 3_4:-79532532 None:intergenic
AGGAGCTTGAACTCCTCCAG+CGG 0.723909 3_4:+79541235 Msa0525880:three_prime_UTR
GGTGGCGGTGACAACAAGAG+CGG 0.739017 3_4:+79537524 Msa0525880:three_prime_UTR
GCTTTGTAGATATCACGTGG+AGG 0.759420 3_4:+79536804 Msa0525880:intron
GATGCTTTGTAGATATCACG+TGG 0.778850 3_4:+79536801 Msa0525880:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAATTAAAA+AGG + chr3_4:79540298-79540317 Msa0525880:intron 0.0%
!! AAATAAAATAAAATTAAAAA+GGG + chr3_4:79540299-79540318 Msa0525880:intron 0.0%
!! AACTTCAAAAATATATAAAT+GGG + chr3_4:79533810-79533829 Msa0525880:intron 10.0%
!!! TGATATTTTTTTTAACTAAA+TGG + chr3_4:79535401-79535420 Msa0525880:intron 10.0%
!!! ATTTTTTTTCTTTAATATCT+AGG + chr3_4:79537027-79537046 Msa0525880:intron 10.0%
!!! TTTTTTTTCTTTAATATCTA+GGG + chr3_4:79537028-79537047 Msa0525880:intron 10.0%
!! CAAATAAAAATAAAATGAAA+AGG + chr3_4:79538542-79538561 Msa0525880:intron 10.0%
!!! TTAAAATTCCATTTTTATTT+TGG + chr3_4:79540221-79540240 Msa0525880:intron 10.0%
!! TTATTGTGTATTAATTAATT+CGG + chr3_4:79541432-79541451 Msa0525880:three_prime_UTR 10.0%
!! CATAATATTATTATTAGTTG+AGG + chr3_4:79532273-79532292 Msa0525880:five_prime_UTR 15.0%
!!! TGGTTTATTTAGTTATTTTT+GGG + chr3_4:79533465-79533484 Msa0525880:intron 15.0%
!! CAACTTCAAAAATATATAAA+TGG + chr3_4:79533809-79533828 Msa0525880:intron 15.0%
!! ACTTCAAAAATATATAAATG+GGG + chr3_4:79533811-79533830 Msa0525880:intron 15.0%
!! ATTATTATGCAATTATCTTA+TGG + chr3_4:79533971-79533990 Msa0525880:intron 15.0%
!!! ATACTAATTCTGTAATATTT+TGG + chr3_4:79535595-79535614 Msa0525880:intron 15.0%
!! TACATTAATATATTATACCT+TGG - chr3_4:79535705-79535724 None:intergenic 15.0%
!!! TAATGTGTTATAATTCTTTT+AGG + chr3_4:79535726-79535745 Msa0525880:intron 15.0%
!!! AATGTGTTATAATTCTTTTA+GGG + chr3_4:79535727-79535746 Msa0525880:intron 15.0%
!! ACAAAGAAATAAAAAATGAA+AGG - chr3_4:79536607-79536626 None:intergenic 15.0%
!!! TAAATTGGATTTTGTAAAAT+TGG + chr3_4:79537749-79537768 Msa0525880:intron 15.0%
!! TTAAAAATAATAACTGACAA+TGG - chr3_4:79538091-79538110 None:intergenic 15.0%
!!! GAATTTTATTTGATATAAGA+TGG - chr3_4:79538306-79538325 None:intergenic 15.0%
!! AATATAGTAATTCTCTAAAT+GGG + chr3_4:79538372-79538391 Msa0525880:intron 15.0%
!! AAACAAAACAAGAATTTATT+TGG - chr3_4:79538612-79538631 None:intergenic 15.0%
!!! ATAAATTCTTGTTTTGTTTA+TGG + chr3_4:79538613-79538632 Msa0525880:intron 15.0%
!! AAAAAGATGTATATTAACTT+AGG - chr3_4:79538854-79538873 None:intergenic 15.0%
!!! TTTTAATTATGTTAATCAGT+GGG - chr3_4:79539085-79539104 None:intergenic 15.0%
!!! ATTTTAATTATGTTAATCAG+TGG - chr3_4:79539086-79539105 None:intergenic 15.0%
!!! TATGGAATTTTCAATTATTT+TGG - chr3_4:79539338-79539357 None:intergenic 15.0%
!! ATGATTGAAGAAAATTTATT+TGG + chr3_4:79540730-79540749 Msa0525880:intron 15.0%
!! AACTTAAAAATATATATTCG+AGG + chr3_4:79541126-79541145 Msa0525880:intron 15.0%
!! ACTTAAAAATATATATTCGA+GGG + chr3_4:79541127-79541146 Msa0525880:intron 15.0%
!!! ATCCATGTTATGTTATTTAT+TGG - chr3_4:79532163-79532182 None:intergenic 20.0%
!!! TTTTGATTATTCTATTCAGA+GGG - chr3_4:79532307-79532326 None:intergenic 20.0%
!!! ATTTTGATTATTCTATTCAG+AGG - chr3_4:79532308-79532327 None:intergenic 20.0%
!!! GTATGAATTTTCTGAAATTT+TGG + chr3_4:79532917-79532936 Msa0525880:intron 20.0%
!!! ATGTAATAATGTTGATTTAC+TGG + chr3_4:79533414-79533433 Msa0525880:intron 20.0%
!!! GTGGTTTATTTAGTTATTTT+TGG + chr3_4:79533464-79533483 Msa0525880:intron 20.0%
!! TGCATAATAATATAAATGCT+TGG - chr3_4:79533962-79533981 None:intergenic 20.0%
!!! TTTTTTTAACATTTCTTCCT+TGG + chr3_4:79534202-79534221 Msa0525880:intron 20.0%
!! CAATATATTACATTATACCA+AGG - chr3_4:79534222-79534241 None:intergenic 20.0%
!! AAATAAAAACGAAAGTAATC+AGG - chr3_4:79534245-79534264 None:intergenic 20.0%
!!! TTTATTTTCTTTTGTTGTGT+AGG + chr3_4:79534258-79534277 Msa0525880:intron 20.0%
!!! CAAGTAAGAAATCAATATTT+TGG + chr3_4:79534518-79534537 Msa0525880:intron 20.0%
!! TAGAAATAGATTCATTTAAG+AGG + chr3_4:79534683-79534702 Msa0525880:intron 20.0%
!! CAAGATAAATTGTACATATA+TGG + chr3_4:79535159-79535178 Msa0525880:three_prime_UTR 20.0%
!! TGAAATAATAGTTTATCTTG+TGG + chr3_4:79535267-79535286 Msa0525880:intron 20.0%
!! GAAATAATAGTTTATCTTGT+GGG + chr3_4:79535268-79535287 Msa0525880:intron 20.0%
!! AAATAATAGTTTATCTTGTG+GGG + chr3_4:79535269-79535288 Msa0525880:intron 20.0%
!! TACAATTACTTTCAAAATTG+TGG - chr3_4:79535306-79535325 None:intergenic 20.0%
!!! TTAACTTGGTCAATATAAAA+GGG - chr3_4:79535372-79535391 None:intergenic 20.0%
!!! TAATTCTGTAATATTTTGGT+CGG + chr3_4:79535599-79535618 Msa0525880:intron 20.0%
!!! ATGTGTTATAATTCTTTTAG+GGG + chr3_4:79535728-79535747 Msa0525880:intron 20.0%
!!! TATAGATAGTTTTAGAGAAT+AGG - chr3_4:79535945-79535964 None:intergenic 20.0%
!! GAACTAAGGATAATATTATT+AGG - chr3_4:79535985-79536004 None:intergenic 20.0%
!!! TTAATACTACTAGTTTATCT+TGG - chr3_4:79536386-79536405 None:intergenic 20.0%
!! GTATTAATAAGTGACTTATT+TGG + chr3_4:79536399-79536418 Msa0525880:intron 20.0%
!! GACAAATATATCTAGTAATT+TGG + chr3_4:79536431-79536450 Msa0525880:intron 20.0%
!!! AGACTGTTTTTTATTTGAAA+GGG + chr3_4:79536472-79536491 Msa0525880:intron 20.0%
!! AGAAAAAATGAGTGAAAAAA+GGG - chr3_4:79536719-79536738 None:intergenic 20.0%
!! AAGAAAAAATGAGTGAAAAA+AGG - chr3_4:79536720-79536739 None:intergenic 20.0%
!!! TTTTAACTTATCAGAACTAT+GGG + chr3_4:79536994-79537013 Msa0525880:intron 20.0%
!! TTTAAATCTAAGTGATAAAG+CGG - chr3_4:79537562-79537581 None:intergenic 20.0%
!! AATATTTGTTCAACATATCT+AGG - chr3_4:79537628-79537647 None:intergenic 20.0%
!!! AAACATGATTTTCACTAAAT+TGG + chr3_4:79537734-79537753 Msa0525880:intron 20.0%
!!! ATAAAAAATAGCTTTTGCAT+TGG - chr3_4:79537870-79537889 None:intergenic 20.0%
!! AATATGATTTAATGCATGTT+TGG - chr3_4:79538006-79538025 None:intergenic 20.0%
!! GAATATAGTAATTCTCTAAA+TGG + chr3_4:79538371-79538390 Msa0525880:intron 20.0%
!!! AAGTATTCCTGTAATATTTT+CGG + chr3_4:79538444-79538463 Msa0525880:intron 20.0%
!! AATATCCTTTGATAAGTTAT+AGG - chr3_4:79538503-79538522 None:intergenic 20.0%
!! TTTATTTGATTAACAAACTC+AGG - chr3_4:79538530-79538549 None:intergenic 20.0%
!! ATAAAATGAAAAGGCTTATT+AGG + chr3_4:79538551-79538570 Msa0525880:intron 20.0%
!!! TTGGTTTTATACTTTTAGAT+TGG + chr3_4:79538689-79538708 Msa0525880:intron 20.0%
!! CTTTAAATTTATCTACTCTA+AGG + chr3_4:79538763-79538782 Msa0525880:intron 20.0%
!! TTAGAAAAGAATTATGTTCA+TGG + chr3_4:79539581-79539600 Msa0525880:intron 20.0%
!! TATAAAATTAGTCAGATCTT+TGG - chr3_4:79539830-79539849 None:intergenic 20.0%
!!! AAGATCTGACTAATTTTATA+TGG + chr3_4:79539830-79539849 Msa0525880:intron 20.0%
!!! AGATCTGACTAATTTTATAT+GGG + chr3_4:79539831-79539850 Msa0525880:intron 20.0%
!! GACTAAATCCAAAATAAAAA+TGG - chr3_4:79540232-79540251 None:intergenic 20.0%
!! ATTGATCTTATTGTTATCAA+AGG + chr3_4:79540538-79540557 Msa0525880:intron 20.0%
!! AAAGAAATATTCTTATCATG+AGG - chr3_4:79540826-79540845 None:intergenic 20.0%
!! AAATAATTCTTTGCAAAACT+GGG + chr3_4:79540847-79540866 Msa0525880:intron 20.0%
!!! TTTGTAATGTTCCAAAATTT+TGG - chr3_4:79541215-79541234 None:intergenic 20.0%
!!! AAATTTTGGAACATTACAAA+AGG + chr3_4:79541215-79541234 Msa0525880:three_prime_UTR 20.0%
!!! AATAAGATTTAGCTTCTATT+TGG + chr3_4:79541471-79541490 Msa0525880:three_prime_UTR 20.0%
!!! ATAAGATTTAGCTTCTATTT+GGG + chr3_4:79541472-79541491 Msa0525880:three_prime_UTR 20.0%
!! ATTATAGTATGATATAGTGA+AGG + chr3_4:79541521-79541540 Msa0525880:three_prime_UTR 20.0%
! AGCCAATAAATAACATAACA+TGG + chr3_4:79532158-79532177 Msa0525880:five_prime_UTR 25.0%
! CTTCAATTCAAACTTAACTT+GGG - chr3_4:79532336-79532355 None:intergenic 25.0%
! TCTTCAATTCAAACTTAACT+TGG - chr3_4:79532337-79532356 None:intergenic 25.0%
!! TGAATTGAAGAGTTTTCAAT+TGG + chr3_4:79532346-79532365 Msa0525880:five_prime_UTR 25.0%
! ATAATAATCAGAAATGTCGA+TGG + chr3_4:79532386-79532405 Msa0525880:exon 25.0%
! TTAGATGTAAGAGATTTAGT+TGG - chr3_4:79532498-79532517 None:intergenic 25.0%
!!! CTATGTGATTTTGATTTTCA+TGG + chr3_4:79532620-79532639 Msa0525880:intron 25.0%
! TTTACTTACTTTCTTTGTGT+TGG + chr3_4:79532695-79532714 Msa0525880:intron 25.0%
! CAAATCTACTATGTTATGTT+AGG - chr3_4:79532856-79532875 None:intergenic 25.0%
! TTCAGAAAATTCATACAGAT+CGG - chr3_4:79532913-79532932 None:intergenic 25.0%
!! AGTCAAACTGTTTTCATATA+AGG + chr3_4:79533092-79533111 Msa0525880:intron 25.0%
!! ATATAAGGTATAAGCTTTTC+AGG + chr3_4:79533107-79533126 Msa0525880:intron 25.0%
!!! AAGTTATTTTGGAGTGATTA+TGG + chr3_4:79533131-79533150 Msa0525880:intron 25.0%
! AATAAGCGGAAAATAGTTTA+TGG + chr3_4:79533155-79533174 Msa0525880:intron 25.0%
! CATTAAACCTTTATCTTCTA+TGG + chr3_4:79533711-79533730 Msa0525880:intron 25.0%
! TAGAACTCAATGAGTTTAAA+TGG - chr3_4:79533789-79533808 None:intergenic 25.0%
! CAATGCAAACATATAGAATA+TGG - chr3_4:79533910-79533929 None:intergenic 25.0%
!! TCTATATGTTTGCATTGATA+TGG + chr3_4:79533913-79533932 Msa0525880:intron 25.0%
! TCTCGAGAATATTGTTAAAT+TGG + chr3_4:79534086-79534105 Msa0525880:intron 25.0%
!! TCTTTTTGTGAAAATATTGG+AGG + chr3_4:79534166-79534185 Msa0525880:intron 25.0%
!!! ATATTTTGGCCAATAGAATT+CGG + chr3_4:79534532-79534551 Msa0525880:intron 25.0%
!! CATTTTCAGATTTCATGATA+TGG + chr3_4:79534642-79534661 Msa0525880:intron 25.0%
! GTTAATAGTGACAACAAAAA+TGG - chr3_4:79534764-79534783 None:intergenic 25.0%
!! AAAACTATTTCCTCTGAAAA+TGG + chr3_4:79534898-79534917 Msa0525880:three_prime_UTR 25.0%
! GATAAATTGTACATATATGG+TGG + chr3_4:79535162-79535181 Msa0525880:three_prime_UTR 25.0%
! TTAAATATCTTTGTTGCATG+AGG + chr3_4:79535230-79535249 Msa0525880:intron 25.0%
! TCTGTTCATAACACAAAATA+TGG - chr3_4:79535332-79535351 None:intergenic 25.0%
!! CTTAACTTGGTCAATATAAA+AGG - chr3_4:79535373-79535392 None:intergenic 25.0%
! TATCAACACATAACTTAACT+TGG - chr3_4:79535386-79535405 None:intergenic 25.0%
! AACTAAATGGAAACAAATAC+AGG + chr3_4:79535414-79535433 Msa0525880:intron 25.0%
! GTTTAATACAAACCAAAGAA+TGG - chr3_4:79535525-79535544 None:intergenic 25.0%
! TATTATACCTTGGATACTTT+CGG - chr3_4:79535695-79535714 None:intergenic 25.0%
!!! TTATAATTCTTTTAGGGGTT+GGG + chr3_4:79535733-79535752 Msa0525880:intron 25.0%
! TAAATGAAAATGTGAGGAAT+AGG + chr3_4:79535770-79535789 Msa0525880:intron 25.0%
! AAATGAAAATGTGAGGAATA+GGG + chr3_4:79535771-79535790 Msa0525880:intron 25.0%
!! CATTAGAAGAGTTATCTTTT+TGG + chr3_4:79535815-79535834 Msa0525880:intron 25.0%
! TGTTAAATATTATGACAGTG+AGG + chr3_4:79536137-79536156 Msa0525880:intron 25.0%
! GTTAAATATTATGACAGTGA+GGG + chr3_4:79536138-79536157 Msa0525880:intron 25.0%
! TAAACATAATAGACACATAC+CGG - chr3_4:79536217-79536236 None:intergenic 25.0%
! TGCTAAAGATGCTTATAAAA+AGG - chr3_4:79536283-79536302 None:intergenic 25.0%
!!! GAGACTGTTTTTTATTTGAA+AGG + chr3_4:79536471-79536490 Msa0525880:intron 25.0%
!!! GACTGTTTTTTATTTGAAAG+GGG + chr3_4:79536473-79536492 Msa0525880:intron 25.0%
!!! AATACCTTAGTAATTTTTGG+TGG + chr3_4:79536849-79536868 Msa0525880:three_prime_UTR 25.0%
!!! ATACCTTAGTAATTTTTGGT+GGG + chr3_4:79536850-79536869 Msa0525880:three_prime_UTR 25.0%
!!! GTTTTAACTTATCAGAACTA+TGG + chr3_4:79536993-79537012 Msa0525880:intron 25.0%
!! TTTTTCTTTAATATCTAGGG+AGG + chr3_4:79537031-79537050 Msa0525880:intron 25.0%
! TCATCAAACAATGTTCTATA+AGG - chr3_4:79537093-79537112 None:intergenic 25.0%
!! CATCTTTGTTTATGCAATAT+TGG + chr3_4:79537114-79537133 Msa0525880:intron 25.0%
!!! AGTTTTTTTCCTCTTTTGAA+TGG - chr3_4:79537150-79537169 None:intergenic 25.0%
! TGTTCTAACTAAGTAATAAC+TGG + chr3_4:79537194-79537213 Msa0525880:intron 25.0%
!! GATTTAAATTTTCTGCATTG+AGG + chr3_4:79537574-79537593 Msa0525880:intron 25.0%
!! TAGGAATATTTTGTATAGTG+TGG - chr3_4:79537609-79537628 None:intergenic 25.0%
! AACCAAATAAGTGTGTATTT+AGG + chr3_4:79537699-79537718 Msa0525880:intron 25.0%
!! TGGATTTTGTAAAATTGGTT+TGG + chr3_4:79537754-79537773 Msa0525880:intron 25.0%
!!! GATTTCAAGTCTTTTAAACA+TGG + chr3_4:79537978-79537997 Msa0525880:intron 25.0%
!!! TTTACCCATTTTAGAAGATT+GGG - chr3_4:79538156-79538175 None:intergenic 25.0%
!!! TTTTACCCATTTTAGAAGAT+TGG - chr3_4:79538157-79538176 None:intergenic 25.0%
! ACATATATGTTCAACATTAG+TGG + chr3_4:79538177-79538196 Msa0525880:intron 25.0%
!! TCTATAGTTTTTATTCCACA+AGG - chr3_4:79538276-79538295 None:intergenic 25.0%
!! AATACTTTTATTCCCTCATA+AGG - chr3_4:79538431-79538450 None:intergenic 25.0%
! TTAAGTTCCGAAAATATTAC+AGG - chr3_4:79538454-79538473 None:intergenic 25.0%
!!! ATTCTTGTTTTGTTTATGGA+TGG + chr3_4:79538617-79538636 Msa0525880:intron 25.0%
!! AATAATTGCTTCTGAAAGAT+TGG + chr3_4:79538670-79538689 Msa0525880:intron 25.0%
!!! TGTGAATTTACTGATTTTTC+TGG + chr3_4:79538801-79538820 Msa0525880:intron 25.0%
!!! GTGAATTTACTGATTTTTCT+GGG + chr3_4:79538802-79538821 Msa0525880:intron 25.0%
! ATTAAAATGTCTGTCATTAC+AGG + chr3_4:79539098-79539117 Msa0525880:intron 25.0%
! TTAAAATGTCTGTCATTACA+GGG + chr3_4:79539099-79539118 Msa0525880:intron 25.0%
! TTGGTTGTAAGTTCATATAA+TGG + chr3_4:79539129-79539148 Msa0525880:three_prime_UTR 25.0%
!!! TTCAATTATTTTGGATTGCA+AGG - chr3_4:79539329-79539348 None:intergenic 25.0%
! AAAAAACTGCTTCATAAAAC+TGG - chr3_4:79539516-79539535 None:intergenic 25.0%
!! TCTAACAAGATTCATTTTCT+TGG + chr3_4:79539610-79539629 Msa0525880:intron 25.0%
! TACAATTTAGATTCTCTGAA+AGG - chr3_4:79539784-79539803 None:intergenic 25.0%
! TCAGAGAATCTAAATTGTAT+TGG + chr3_4:79539785-79539804 Msa0525880:intron 25.0%
! ACCTTTCATTTGCATTAATA+AGG + chr3_4:79539882-79539901 Msa0525880:intron 25.0%
! TAAAAGTAGTTACCTTGTAA+AGG - chr3_4:79540198-79540217 None:intergenic 25.0%
! CTGAATAGATAATAAACACA+AGG - chr3_4:79540387-79540406 None:intergenic 25.0%
! GGATTAACTCATTTAATTGT+TGG - chr3_4:79540805-79540824 None:intergenic 25.0%
! CAAATAATTCTTTGCAAAAC+TGG + chr3_4:79540846-79540865 Msa0525880:intron 25.0%
! ACTCTACTATATGATAAGTT+AGG + chr3_4:79540994-79541013 Msa0525880:intron 25.0%
! CTATATGATAAGTTAGGTAT+TGG + chr3_4:79541000-79541019 Msa0525880:intron 25.0%
!! CTGACTTTGATTTAAAATTG+TGG + chr3_4:79541057-79541076 Msa0525880:intron 25.0%
AAGAGATTTAGTTGGAGAAT+TGG - chr3_4:79532490-79532509 None:intergenic 30.0%
TCTCTATAGCTTATATCAAC+AGG + chr3_4:79532542-79532561 Msa0525880:CDS 30.0%
TGATCCGTGTTATGAAAATT+AGG + chr3_4:79532814-79532833 Msa0525880:intron 30.0%
!!! CTGAAATTTTGGTTTTCGTT+AGG + chr3_4:79532928-79532947 Msa0525880:intron 30.0%
!!! GCTTTTCAGGTAAGTTATTT+TGG + chr3_4:79533120-79533139 Msa0525880:intron 30.0%
TCAAATAAGCTAATCCAAAC+AGG + chr3_4:79533246-79533265 Msa0525880:intron 30.0%
! TTTGTTGTGTTATCGTTCTA+TGG + chr3_4:79533488-79533507 Msa0525880:intron 30.0%
TTGATCAATGAAACGAATCA+AGG - chr3_4:79533534-79533553 None:intergenic 30.0%
GTTTAAAAAGCAAACAAACC+TGG - chr3_4:79533648-79533667 None:intergenic 30.0%
ATAGTAACAGCACATAAAAG+CGG - chr3_4:79533684-79533703 None:intergenic 30.0%
ACCTTTATCTTCTATGGATT+TGG + chr3_4:79533717-79533736 Msa0525880:intron 30.0%
TCCAAATCCATAGAAGATAA+AGG - chr3_4:79533721-79533740 None:intergenic 30.0%
TCTCACCATTAAAACTCATT+GGG - chr3_4:79533837-79533856 None:intergenic 30.0%
ATCTCACCATTAAAACTCAT+TGG - chr3_4:79533838-79533857 None:intergenic 30.0%
ATGTTTAAATCCAACATGAG+AGG - chr3_4:79533873-79533892 None:intergenic 30.0%
ATGTTGGATTTAAACATGAG+AGG + chr3_4:79533876-79533895 Msa0525880:intron 30.0%
! TTTGCATTGATATGGAATTC+TGG + chr3_4:79533921-79533940 Msa0525880:intron 30.0%
! TATTTTCACAAAAAGACGCA+TGG - chr3_4:79534162-79534181 None:intergenic 30.0%
! GCGTCTTTTTGTGAAAATAT+TGG + chr3_4:79534163-79534182 Msa0525880:intron 30.0%
TTCATTTGAACGTCTATTAC+AGG - chr3_4:79534331-79534350 None:intergenic 30.0%
!! AATACTGAGTCTTGTTCTTT+CGG + chr3_4:79534376-79534395 Msa0525880:intron 30.0%
! CACGATATGGTTTTCATTAT+TGG + chr3_4:79534490-79534509 Msa0525880:intron 30.0%
!!! TATTTTGGCCAATAGAATTC+GGG + chr3_4:79534533-79534552 Msa0525880:intron 30.0%
TTAGTTGCATGAATTGTTTG+CGG - chr3_4:79534595-79534614 None:intergenic 30.0%
! ATTTCTAAAGATCAAACCCT+TGG - chr3_4:79534670-79534689 None:intergenic 30.0%
TGACAACAAAAATGGAGAAT+AGG - chr3_4:79534756-79534775 None:intergenic 30.0%
AGACATTGGAAACAAAGAAA+CGG - chr3_4:79534800-79534819 None:intergenic 30.0%
TTGAACCAGTAATTGAGAAT+GGG + chr3_4:79534857-79534876 Msa0525880:three_prime_UTR 30.0%
! AACTTGATTTCCATTTTCAG+AGG - chr3_4:79534911-79534930 None:intergenic 30.0%
TCTGAAAATGGAAATCAAGT+TGG + chr3_4:79534910-79534929 Msa0525880:three_prime_UTR 30.0%
ACAGGATAAAGATGTTGTTA+TGG + chr3_4:79534936-79534955 Msa0525880:three_prime_UTR 30.0%
GATAAAGATGTTGTTATGGA+AGG + chr3_4:79534940-79534959 Msa0525880:three_prime_UTR 30.0%
! ATATATGGTGGAAATCACAA+TGG + chr3_4:79535174-79535193 Msa0525880:three_prime_UTR 30.0%
CATGAAGATCACTAAGATAA+CGG - chr3_4:79535200-79535219 None:intergenic 30.0%
! ATGGAAACAAATACAGGTTT+TGG + chr3_4:79535420-79535439 Msa0525880:intron 30.0%
TATAAGCAATCGACAAGAAA+TGG - chr3_4:79535578-79535597 None:intergenic 30.0%
!! GTTATAATTCTTTTAGGGGT+TGG + chr3_4:79535732-79535751 Msa0525880:intron 30.0%
TGTGCTTAAATGAAAATGTG+AGG + chr3_4:79535764-79535783 Msa0525880:intron 30.0%
GAGATCAAATTGATGAACTA+AGG - chr3_4:79535999-79536018 None:intergenic 30.0%
!!! ACTGCTGTTTTTTGTATTGT+TGG + chr3_4:79536074-79536093 Msa0525880:intron 30.0%
TTTGTGATTGCAACTAAGTA+TGG + chr3_4:79536107-79536126 Msa0525880:intron 30.0%
TTGTGATTGCAACTAAGTAT+GGG + chr3_4:79536108-79536127 Msa0525880:intron 30.0%
ATGCTTATAAAAAGGACAGA+GGG - chr3_4:79536275-79536294 None:intergenic 30.0%
TTTGAAAGGGGCTTATAATT+AGG + chr3_4:79536485-79536504 Msa0525880:intron 30.0%
ATGTGCATTTCTATAACAAG+AGG + chr3_4:79536547-79536566 Msa0525880:intron 30.0%
! GGGAATACCTTAGTAATTTT+TGG + chr3_4:79536846-79536865 Msa0525880:three_prime_UTR 30.0%
AGAGGAAAAAAACTTGAGAA+TGG + chr3_4:79537156-79537175 Msa0525880:intron 30.0%
CTCCAAAGATAAGTAAGTAT+CGG - chr3_4:79537274-79537293 None:intergenic 30.0%
GATACTTACTTATCTTTGGA+GGG + chr3_4:79537273-79537292 Msa0525880:three_prime_UTR 30.0%
! ATACTTACTTATCTTTGGAG+GGG + chr3_4:79537274-79537293 Msa0525880:three_prime_UTR 30.0%
ATGTAAATCATTGTAGCAAG+TGG - chr3_4:79537309-79537328 None:intergenic 30.0%
AATTCCTGCAAACAATTAGA+TGG - chr3_4:79537405-79537424 None:intergenic 30.0%
CACCTAAATACACACTTATT+TGG - chr3_4:79537704-79537723 None:intergenic 30.0%
!! AAAATAGCTTTTGCATTGGT+TGG - chr3_4:79537866-79537885 None:intergenic 30.0%
AATAACTGACAATGGAAGTA+TGG - chr3_4:79538083-79538102 None:intergenic 30.0%
! GTAATCCCTTTTACTGTTTA+AGG + chr3_4:79538229-79538248 Msa0525880:intron 30.0%
GAGTACCTTAAACAGTAAAA+GGG - chr3_4:79538237-79538256 None:intergenic 30.0%
! AGAGTACCTTAAACAGTAAA+AGG - chr3_4:79538238-79538257 None:intergenic 30.0%
TTTGATAAGTTATAGGTCCT+GGG - chr3_4:79538496-79538515 None:intergenic 30.0%
AGATCATTGATGCTAACAAT+TGG + chr3_4:79538581-79538600 Msa0525880:intron 30.0%
GATCATTGATGCTAACAATT+GGG + chr3_4:79538582-79538601 Msa0525880:intron 30.0%
! TTAGATTGGTTAATAGCTTC+TGG + chr3_4:79538703-79538722 Msa0525880:intron 30.0%
!! AATTTATCTACTCTAAGGTG+TGG + chr3_4:79538768-79538787 Msa0525880:intron 30.0%
! CTGGGATTTTATGACATTTT+TGG + chr3_4:79538820-79538839 Msa0525880:intron 30.0%
! GAAGATGTACTTGTATCTTT+TGG + chr3_4:79539153-79539172 Msa0525880:three_prime_UTR 30.0%
TGTTGTATAAGAGTTATCCA+CGG - chr3_4:79539458-79539477 None:intergenic 30.0%
GAGAATCTAAATTGTATTGG+AGG + chr3_4:79539788-79539807 Msa0525880:intron 30.0%
! GCCTTATTAATGCAAATGAA+AGG - chr3_4:79539886-79539905 None:intergenic 30.0%
AATGGCACAAATGCATAAAA+TGG - chr3_4:79539994-79540013 None:intergenic 30.0%
!!! TGCCATTTTATTTTCTATCC+TGG + chr3_4:79540007-79540026 Msa0525880:intron 30.0%
TGCCAGGATAGAAAATAAAA+TGG - chr3_4:79540012-79540031 None:intergenic 30.0%
AGTACCTGCTTTAATATTTC+TGG + chr3_4:79540031-79540050 Msa0525880:intron 30.0%
GATACCAGAAATATTAAAGC+AGG - chr3_4:79540038-79540057 None:intergenic 30.0%
TAATAACTCTGACCTTTACA+AGG + chr3_4:79540183-79540202 Msa0525880:three_prime_UTR 30.0%
! ATTTTGGATTTAGTCCAGAA+TGG + chr3_4:79540237-79540256 Msa0525880:intron 30.0%
TATGATTCTTAGATCCATTC+TGG - chr3_4:79540254-79540273 None:intergenic 30.0%
!!! GCGTGTTTTTTAATAGAATC+TGG + chr3_4:79540697-79540716 Msa0525880:intron 30.0%
ACTTATCATATAGTAGAGTC+AGG - chr3_4:79540993-79541012 None:intergenic 30.0%
AGATTAGATCACAACAATGA+AGG - chr3_4:79541033-79541052 None:intergenic 30.0%
AAATATATATTTGAGTGCGC+AGG + chr3_4:79541161-79541180 Msa0525880:intron 30.0%
AATACAGTCATCAGCAAAAA+TGG - chr3_4:79541559-79541578 None:intergenic 30.0%
TAAGCTATAGAGAAGAAGAG+CGG - chr3_4:79532535-79532554 None:intergenic 35.0%
CAATGCAGGTAAAAGGAAAA+AGG - chr3_4:79532573-79532592 None:intergenic 35.0%
! CACGCCTAATTTTCATAACA+CGG - chr3_4:79532821-79532840 None:intergenic 35.0%
TAATTGCTTCCGACTGATTA+AGG + chr3_4:79532876-79532895 Msa0525880:intron 35.0%
! GCAAGTTTTCCTTAATCAGT+CGG - chr3_4:79532888-79532907 None:intergenic 35.0%
GGAGTGATTATGGAAATAAG+CGG + chr3_4:79533141-79533160 Msa0525880:intron 35.0%
TAGGCACTTGTGAAACTATT+TGG - chr3_4:79533211-79533230 None:intergenic 35.0%
TTGAACTTACCTACTGACAT+AGG - chr3_4:79533230-79533249 None:intergenic 35.0%
CTACAACAACTACAAGCTTA+TGG - chr3_4:79533273-79533292 None:intergenic 35.0%
AGATGAAGTGCACTGAATTA+CGG + chr3_4:79533320-79533339 Msa0525880:intron 35.0%
ATCGTTCTATGGAATTGAAG+TGG + chr3_4:79533499-79533518 Msa0525880:intron 35.0%
!! CGTGCTTAATTTGTCATTTC+AGG + chr3_4:79533556-79533575 Msa0525880:intron 35.0%
! TCCACAATTTTCCATGAACT+GGG - chr3_4:79533611-79533630 None:intergenic 35.0%
AAATTGTGGAGCATAGCAAA+TGG + chr3_4:79533621-79533640 Msa0525880:CDS 35.0%
AATTGTGGAGCATAGCAAAT+GGG + chr3_4:79533622-79533641 Msa0525880:CDS 35.0%
! TCTTGTTTGAATCCAACATG+AGG + chr3_4:79533743-79533762 Msa0525880:intron 35.0%
CTTGTTTGAATCCAACATGA+GGG + chr3_4:79533744-79533763 Msa0525880:intron 35.0%
TGAAAATAACACCCTCATGT+TGG - chr3_4:79533758-79533777 None:intergenic 35.0%
TGAACATAATCCTCTCATGT+TGG + chr3_4:79533860-79533879 Msa0525880:intron 35.0%
TTAACAATATTCTCGAGAGC+AGG - chr3_4:79534084-79534103 None:intergenic 35.0%
! TTGGTAATTACTGATGCAGT+TGG + chr3_4:79534105-79534124 Msa0525880:intron 35.0%
! GGAGTTGTACTTATGCTTTT+TGG + chr3_4:79534397-79534416 Msa0525880:intron 35.0%
!!! TGTACTTATGCTTTTTGGCT+TGG + chr3_4:79534402-79534421 Msa0525880:intron 35.0%
!! ATTTTGGCCAATAGAATTCG+GGG + chr3_4:79534534-79534553 Msa0525880:intron 35.0%
TACAATACCCCGAATTCTAT+TGG - chr3_4:79534544-79534563 None:intergenic 35.0%
TAGTTGCATGAATTGTTTGC+GGG - chr3_4:79534594-79534613 None:intergenic 35.0%
ATTCATGCAACTAAGATAGC+TGG + chr3_4:79534601-79534620 Msa0525880:intron 35.0%
TTCATGCAACTAAGATAGCT+GGG + chr3_4:79534602-79534621 Msa0525880:intron 35.0%
ATTTCATGATATGGCACCAA+GGG + chr3_4:79534651-79534670 Msa0525880:intron 35.0%
GACATTGGAAACAAAGAAAC+GGG - chr3_4:79534799-79534818 None:intergenic 35.0%
AGAAAGGTAGAATCAGACAT+TGG - chr3_4:79534814-79534833 None:intergenic 35.0%
AATGTCTGATTCTACCTTTC+TGG + chr3_4:79534813-79534832 Msa0525880:intron 35.0%
!! CTCAATTACTGGTTCAACTT+TGG - chr3_4:79534854-79534873 None:intergenic 35.0%
GTTGAACCAGTAATTGAGAA+TGG + chr3_4:79534856-79534875 Msa0525880:three_prime_UTR 35.0%
! GAGGAAATAGTTTTTGTCTC+TGG - chr3_4:79534892-79534911 None:intergenic 35.0%
AAATAAACGCACTTGGCTTA+GGG - chr3_4:79535115-79535134 None:intergenic 35.0%
TATGTCACTACAGATTGCAT+GGG + chr3_4:79535627-79535646 Msa0525880:intron 35.0%
AGTTACAGTGTATTTCTCCT+CGG + chr3_4:79536029-79536048 Msa0525880:intron 35.0%
GAACTAGAGTTATAAAACCG+AGG - chr3_4:79536049-79536068 None:intergenic 35.0%
TTGATCTACAAAGAGCAACA+TGG + chr3_4:79536164-79536183 Msa0525880:three_prime_UTR 35.0%
GATGCTTATAAAAAGGACAG+AGG - chr3_4:79536276-79536295 None:intergenic 35.0%
GGCTTATAATTAGGTAGAGA+GGG + chr3_4:79536494-79536513 Msa0525880:intron 35.0%
AAATGAAAGGAGAAGAGAGA+GGG - chr3_4:79536594-79536613 None:intergenic 35.0%
AAAATGAAAGGAGAAGAGAG+AGG - chr3_4:79536595-79536614 None:intergenic 35.0%
! AAGCATACATGATGGAAGAA+GGG - chr3_4:79536667-79536686 None:intergenic 35.0%
! AAAGCATACATGATGGAAGA+AGG - chr3_4:79536668-79536687 None:intergenic 35.0%
TTCCATCATGTATGCTTTCT+AGG + chr3_4:79536670-79536689 Msa0525880:intron 35.0%
! TACCTAGAAAGCATACATGA+TGG - chr3_4:79536675-79536694 None:intergenic 35.0%
TATGCTTTCTAGGTATCACT+TGG + chr3_4:79536680-79536699 Msa0525880:intron 35.0%
ATGCTTTCTAGGTATCACTT+GGG + chr3_4:79536681-79536700 Msa0525880:intron 35.0%
GTGAAAAAAGGGTCACAAAT+TGG - chr3_4:79536708-79536727 None:intergenic 35.0%
AAGCATCACATGACAAATGA+GGG - chr3_4:79536788-79536807 None:intergenic 35.0%
! AAAGCATCACATGACAAATG+AGG - chr3_4:79536789-79536808 None:intergenic 35.0%
TTGCCCACCAAAAATTACTA+AGG - chr3_4:79536856-79536875 None:intergenic 35.0%
CCATGAAGATAGAATTGCTT+CGG - chr3_4:79536968-79536987 None:intergenic 35.0%
ATATCTAGGGAGGACTTTAA+TGG + chr3_4:79537041-79537060 Msa0525880:intron 35.0%
TTTCTCTGACCATTCAAAAG+AGG + chr3_4:79537138-79537157 Msa0525880:intron 35.0%
AACTAAGTAATAACTGGCAG+CGG + chr3_4:79537200-79537219 Msa0525880:intron 35.0%
GACCGATACTTACTTATCTT+TGG + chr3_4:79537269-79537288 Msa0525880:three_prime_UTR 35.0%
CGATACTTACTTATCTTTGG+AGG + chr3_4:79537272-79537291 Msa0525880:three_prime_UTR 35.0%
! TACTTACTTATCTTTGGAGG+GGG + chr3_4:79537275-79537294 Msa0525880:three_prime_UTR 35.0%
CAAACAATTAGATGGAGTCT+CGG - chr3_4:79537397-79537416 None:intergenic 35.0%
TAAACCATTTGATGTACACG+CGG + chr3_4:79537651-79537670 Msa0525880:intron 35.0%
TATTACTTCAAGTCAAACCG+AGG + chr3_4:79537887-79537906 Msa0525880:intron 35.0%
! ATACTTTTGCCTACAAACCT+CGG - chr3_4:79537907-79537926 None:intergenic 35.0%
AGTACTGTACCATCAATTAC+TGG + chr3_4:79538051-79538070 Msa0525880:intron 35.0%
ATATGTGTATCTCGACGTAT+AGG + chr3_4:79538115-79538134 Msa0525880:intron 35.0%
! CGTATAGGTTTGTTCACTAA+TGG + chr3_4:79538130-79538149 Msa0525880:intron 35.0%
! AATGGCCCAATCTTCTAAAA+TGG + chr3_4:79538148-79538167 Msa0525880:intron 35.0%
!! ATGGCCCAATCTTCTAAAAT+GGG + chr3_4:79538149-79538168 Msa0525880:intron 35.0%
! TGTTTAAGGTACTCTTGTTC+AGG + chr3_4:79538243-79538262 Msa0525880:intron 35.0%
!! TCCTGGGTCATTTTAAATCT+AGG - chr3_4:79538480-79538499 None:intergenic 35.0%
CTTTGATAAGTTATAGGTCC+TGG - chr3_4:79538497-79538516 None:intergenic 35.0%
CAGGACCTATAACTTATCAA+AGG + chr3_4:79538495-79538514 Msa0525880:intron 35.0%
!! TGGATGGAGAACTACTTTTA+AGG + chr3_4:79538633-79538652 Msa0525880:intron 35.0%
AATCAGTAAATTCACAACCC+AGG - chr3_4:79538797-79538816 None:intergenic 35.0%
!! TATACTCCTTGTTATTCTGC+AGG + chr3_4:79538881-79538900 Msa0525880:intron 35.0%
!! ATACTCCTTGTTATTCTGCA+GGG + chr3_4:79538882-79538901 Msa0525880:intron 35.0%
! GATGTACTTGTATCTTTTGG+AGG + chr3_4:79539156-79539175 Msa0525880:three_prime_UTR 35.0%
!! GTATCTTTTGGAGGATACAA+TGG + chr3_4:79539165-79539184 Msa0525880:three_prime_UTR 35.0%
! AGGACATGAAGGGAAAATTT+TGG + chr3_4:79539426-79539445 Msa0525880:three_prime_UTR 35.0%
!! GAAAATTTTGGAAATTGCCG+TGG + chr3_4:79539438-79539457 Msa0525880:three_prime_UTR 35.0%
! AAGCTTTTAGATCCTCTGAA+AGG - chr3_4:79539718-79539737 None:intergenic 35.0%
AAATGACTCGATGACAGATT+TGG - chr3_4:79539857-79539876 None:intergenic 35.0%
GGTATCATACAGAAATCCAA+AGG + chr3_4:79540052-79540071 Msa0525880:intron 35.0%
ACTAGAATCATCACTCAGTA+AGG + chr3_4:79540111-79540130 Msa0525880:three_prime_UTR 35.0%
AAGGTCAGAGTTATTAGACT+CGG - chr3_4:79540179-79540198 None:intergenic 35.0%
!! TTTCTAGAGCTTTGAGTTGT+AGG + chr3_4:79540355-79540374 Msa0525880:intron 35.0%
!! TTCTAGAGCTTTGAGTTGTA+GGG + chr3_4:79540356-79540375 Msa0525880:intron 35.0%
! AAACACTTTCTTTTGTCTCC+TGG + chr3_4:79540415-79540434 Msa0525880:intron 35.0%
TTGTCAGGGCACAAAATATA+AGG - chr3_4:79540565-79540584 None:intergenic 35.0%
TAGGTTAGTAGTCAGATGAA+TGG - chr3_4:79540767-79540786 None:intergenic 35.0%
TACCTGACTCTACTATATGA+TGG + chr3_4:79540917-79540936 Msa0525880:intron 35.0%
ACCTGACTCTACTATATGAT+GGG + chr3_4:79540918-79540937 Msa0525880:intron 35.0%
ATCACAACAATGAAGGATTC+AGG - chr3_4:79541026-79541045 None:intergenic 35.0%
TTCATTCATCATCTGCATTC+TGG - chr3_4:79541350-79541369 None:intergenic 35.0%
! ATTGTTGTTCAGTTAAGCCA+AGG - chr3_4:79541373-79541392 None:intergenic 35.0%
CTGAACAACAATGCTTCATT+TGG + chr3_4:79541381-79541400 Msa0525880:three_prime_UTR 35.0%
! AGATTTAGCTTCTATTTGGG+CGG + chr3_4:79541475-79541494 Msa0525880:three_prime_UTR 35.0%
! AGGAAAATTTTCCACACATG+AGG + chr3_4:79541498-79541517 Msa0525880:three_prime_UTR 35.0%
CATACTATAATCCTCATGTG+TGG - chr3_4:79541512-79541531 None:intergenic 35.0%
! CTGGTTTGCAATATCCAGAA+CGG + chr3_4:79532427-79532446 Msa0525880:CDS 40.0%
CAAAAAACGCAATGCAATGC+AGG - chr3_4:79532587-79532606 None:intergenic 40.0%
CGTGTTATGAAAATTAGGCG+TGG + chr3_4:79532819-79532838 Msa0525880:intron 40.0%
! TTTTCGTTAGGAGTCAACAG+CGG + chr3_4:79532940-79532959 Msa0525880:intron 40.0%
ATGATCACTCGGTCTGATAT+AGG + chr3_4:79532977-79532996 Msa0525880:intron 40.0%
GGTCTGATATAGGATCTGTT+TGG + chr3_4:79532987-79533006 Msa0525880:intron 40.0%
TACAAGCTTATGGACCTGTT+TGG - chr3_4:79533263-79533282 None:intergenic 40.0%
GTTGTTGTAGCACTTGACAT+TGG + chr3_4:79533283-79533302 Msa0525880:intron 40.0%
AGTGCACTTCATCTGAATGT+AGG - chr3_4:79533314-79533333 None:intergenic 40.0%
! TTGTCATTTCAGGCTAGTGT+AGG + chr3_4:79533566-79533585 Msa0525880:intron 40.0%
! TTTTCCATGAACTGGGTTCT+GGG - chr3_4:79533604-79533623 None:intergenic 40.0%
! ATTTTCCATGAACTGGGTTC+TGG - chr3_4:79533605-79533624 None:intergenic 40.0%
ACCCAGTTCATGGAAAATTG+TGG + chr3_4:79533607-79533626 Msa0525880:CDS 40.0%
! CTCCACAATTTTCCATGAAC+TGG - chr3_4:79533612-79533631 None:intergenic 40.0%
AATATTCTCGAGAGCAGGAA+TGG - chr3_4:79534079-79534098 None:intergenic 40.0%
AGTACTTACTGAGCACGATA+TGG + chr3_4:79534477-79534496 Msa0525880:intron 40.0%
GATTTCATGATATGGCACCA+AGG + chr3_4:79534650-79534669 Msa0525880:intron 40.0%
!! CTGATTCTACCTTTCTGGTT+TGG + chr3_4:79534818-79534837 Msa0525880:intron 40.0%
ATTATGCTGCCAAACCAGAA+AGG - chr3_4:79534830-79534849 None:intergenic 40.0%
GTGTTCCCATTCTCAATTAC+TGG - chr3_4:79534865-79534884 None:intergenic 40.0%
!! TGGAAATCAAGTTGGAACAC+AGG + chr3_4:79534918-79534937 Msa0525880:three_prime_UTR 40.0%
GATGTTGTTATGGAAGGCTT+TGG + chr3_4:79534946-79534965 Msa0525880:three_prime_UTR 40.0%
CAGTTGGAGTCTATGATCAA+TGG + chr3_4:79534971-79534990 Msa0525880:three_prime_UTR 40.0%
TTTGGACGTTGACCAGATAT+TGG - chr3_4:79535006-79535025 None:intergenic 40.0%
! AAAACCTCATATCGGGCTTT+TGG - chr3_4:79535024-79535043 None:intergenic 40.0%
! AAAAGCCCGATATGAGGTTT+TGG + chr3_4:79535023-79535042 Msa0525880:intron 40.0%
AAGAGCCAAAACCTCATATC+GGG - chr3_4:79535031-79535050 None:intergenic 40.0%
CAAGAGCCAAAACCTCATAT+CGG - chr3_4:79535032-79535051 None:intergenic 40.0%
CAAATAAACGCACTTGGCTT+AGG - chr3_4:79535116-79535135 None:intergenic 40.0%
GCTGAACAAATAAACGCACT+TGG - chr3_4:79535122-79535141 None:intergenic 40.0%
GTGCGTTTATTTGTTCAGCA+TGG + chr3_4:79535123-79535142 Msa0525880:intron 40.0%
!!! AGGTTTTGGATTTGAGAAGC+TGG + chr3_4:79535434-79535453 Msa0525880:intron 40.0%
TTGGTCAAAGCTTGAGGTTA+AGG + chr3_4:79535459-79535478 Msa0525880:three_prime_UTR 40.0%
ACATGGATCCAAAGTTGTAG+AGG - chr3_4:79535497-79535516 None:intergenic 40.0%
CTATGTCACTACAGATTGCA+TGG + chr3_4:79535626-79535645 Msa0525880:intron 40.0%
ATGTCACTACAGATTGCATG+GGG + chr3_4:79535628-79535647 Msa0525880:intron 40.0%
AATAAGCTCCTGTCAATTGC+CGG + chr3_4:79535652-79535671 Msa0525880:three_prime_UTR 40.0%
! TTTCGGAAGGATCTTTTGTG+TGG - chr3_4:79535678-79535697 None:intergenic 40.0%
ATACCTTGGATACTTTCGGA+AGG - chr3_4:79535691-79535710 None:intergenic 40.0%
! TGGTCAACTCTAAAGACCTA+TGG + chr3_4:79536184-79536203 Msa0525880:three_prime_UTR 40.0%
! GGTCAACTCTAAAGACCTAT+GGG + chr3_4:79536185-79536204 Msa0525880:three_prime_UTR 40.0%
ACATAATAGACACATACCGG+AGG - chr3_4:79536214-79536233 None:intergenic 40.0%
GGGCTTATAATTAGGTAGAG+AGG + chr3_4:79536493-79536512 Msa0525880:intron 40.0%
!! GTAGAGAGGGAGTATCATTT+AGG + chr3_4:79536507-79536526 Msa0525880:intron 40.0%
! AGCATACATGATGGAAGAAG+GGG - chr3_4:79536666-79536685 None:intergenic 40.0%
TGCTTTCTAGGTATCACTTG+GGG + chr3_4:79536682-79536701 Msa0525880:intron 40.0%
GACAAATGAGGGAACTAAAC+AGG - chr3_4:79536777-79536796 None:intergenic 40.0%
GATGCTTTGTAGATATCACG+TGG + chr3_4:79536801-79536820 Msa0525880:intron 40.0%
! TACTAAGGTATTCCCGACAA+GGG - chr3_4:79536841-79536860 None:intergenic 40.0%
! TTACTAAGGTATTCCCGACA+AGG - chr3_4:79536842-79536861 None:intergenic 40.0%
CTTGAATGACCTGCATATTC+TGG + chr3_4:79536893-79536912 Msa0525880:three_prime_UTR 40.0%
TTTCCAAGTCCAGAATATGC+AGG - chr3_4:79536905-79536924 None:intergenic 40.0%
ATCAATTTCGTCCCATGTCA+TGG - chr3_4:79536928-79536947 None:intergenic 40.0%
CCGAAGCAATTCTATCTTCA+TGG + chr3_4:79536965-79536984 Msa0525880:intron 40.0%
ACTTATCAGAACTATGGGAG+AGG + chr3_4:79536999-79537018 Msa0525880:intron 40.0%
CTTATCAGAACTATGGGAGA+GGG + chr3_4:79537000-79537019 Msa0525880:intron 40.0%
TTATCAGAACTATGGGAGAG+GGG + chr3_4:79537001-79537020 Msa0525880:intron 40.0%
! AGGGAGGACTTTAATGGTTT+TGG + chr3_4:79537047-79537066 Msa0525880:intron 40.0%
! GGGAGGACTTTAATGGTTTT+GGG + chr3_4:79537048-79537067 Msa0525880:intron 40.0%
CTTCATAACTGATCAGGCAA+TGG - chr3_4:79537356-79537375 None:intergenic 40.0%
TTGCCTGATCAGTTATGAAG+TGG + chr3_4:79537356-79537375 Msa0525880:intron 40.0%
AGTCCACTTCATAACTGATC+AGG - chr3_4:79537362-79537381 None:intergenic 40.0%
TGATCAGTTATGAAGTGGAC+TGG + chr3_4:79537361-79537380 Msa0525880:intron 40.0%
GACTCCATCTAATTGTTTGC+AGG + chr3_4:79537398-79537417 Msa0525880:intron 40.0%
! GTTTGCAGGAATTTTGCAGA+TGG + chr3_4:79537412-79537431 Msa0525880:intron 40.0%
! CAGGAATTTTGCAGATGGAA+TGG + chr3_4:79537417-79537436 Msa0525880:intron 40.0%
!! TTTAGTTTGACCCACAGCAT+AGG - chr3_4:79537681-79537700 None:intergenic 40.0%
CTGTACCATCAATTACTGGT+TGG + chr3_4:79538055-79538074 Msa0525880:intron 40.0%
TGGAACCAACCAGTAATTGA+TGG - chr3_4:79538063-79538082 None:intergenic 40.0%
AATGTAGAGCGAGATTCAAG+TGG + chr3_4:79538203-79538222 Msa0525880:intron 40.0%
TGTTCAGGAAAAACACCTTG+TGG + chr3_4:79538258-79538277 Msa0525880:intron 40.0%
!! AACGCGTTGATAACTCAAAC+AGG - chr3_4:79538351-79538370 None:intergenic 40.0%
TCCCTCATAAGGCAATTGAT+GGG - chr3_4:79538420-79538439 None:intergenic 40.0%
TTCCCTCATAAGGCAATTGA+TGG - chr3_4:79538421-79538440 None:intergenic 40.0%
! GCCTAGATTTAAAATGACCC+AGG + chr3_4:79538476-79538495 Msa0525880:intron 40.0%
!! TACTCCTTGTTATTCTGCAG+GGG + chr3_4:79538883-79538902 Msa0525880:intron 40.0%
AGAGACGGTTGTACTGAATA+TGG + chr3_4:79538910-79538929 Msa0525880:three_prime_UTR 40.0%
TCAGTGGTAACATCTGTTCA+AGG + chr3_4:79538947-79538966 Msa0525880:three_prime_UTR 40.0%
CAGTGGTAACATCTGTTCAA+GGG + chr3_4:79538948-79538967 Msa0525880:three_prime_UTR 40.0%
AAGGATGCCTAATGACATCA+AGG - chr3_4:79539056-79539075 None:intergenic 40.0%
AGGGATAACAGAGCAGAAAT+GGG - chr3_4:79539230-79539249 None:intergenic 40.0%
AAGGGATAACAGAGCAGAAA+TGG - chr3_4:79539231-79539250 None:intergenic 40.0%
AGCGAGAATGACAAAGCAAA+GGG - chr3_4:79539249-79539268 None:intergenic 40.0%
!! TGATTTGACTTGCTGCTTTC+AGG + chr3_4:79539273-79539292 Msa0525880:intron 40.0%
AGCATTTGTAGCATTTGGGA+CGG - chr3_4:79539377-79539396 None:intergenic 40.0%
GGGTAGCATTTGTAGCATTT+GGG - chr3_4:79539381-79539400 None:intergenic 40.0%
AAATTCAGATCCTGTATCGC+GGG - chr3_4:79539401-79539420 None:intergenic 40.0%
CAAATTCAGATCCTGTATCG+CGG - chr3_4:79539402-79539421 None:intergenic 40.0%
! AATTTGGAGCAGGACATGAA+GGG + chr3_4:79539416-79539435 Msa0525880:three_prime_UTR 40.0%
!!! GAAGCAGTTTTTTCCAGCAT+TGG + chr3_4:79539523-79539542 Msa0525880:intron 40.0%
ATTGCTAACACAACCAATGC+TGG - chr3_4:79539539-79539558 None:intergenic 40.0%
! TTTTCTTGGTTGCATGCCTT+TGG + chr3_4:79539624-79539643 Msa0525880:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG - chr3_4:79539702-79539721 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG - chr3_4:79539705-79539724 None:intergenic 40.0%
CTCTGTTTATAGCCTTTCAG+AGG + chr3_4:79539703-79539722 Msa0525880:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG - chr3_4:79539702-79539721 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG - chr3_4:79539705-79539724 None:intergenic 40.0%
GCACACAGAACTTGCATTTA+TGG + chr3_4:79539904-79539923 Msa0525880:intron 40.0%
GCGCATCATTTAAATGATGC+AGG - chr3_4:79539966-79539985 None:intergenic 40.0%
! ATATTAAAGCAGGTACTGCC+AGG - chr3_4:79540028-79540047 None:intergenic 40.0%
GACTGATATGAGATCACCTT+TGG - chr3_4:79540071-79540090 None:intergenic 40.0%
TGATCTCATATCAGTCCTGA+AGG + chr3_4:79540075-79540094 Msa0525880:three_prime_UTR 40.0%
TCTTCAACTAAAGCAAGAGC+TGG + chr3_4:79540147-79540166 Msa0525880:three_prime_UTR 40.0%
!! TCTTTTGTCTCCTGGTCTTT+TGG + chr3_4:79540423-79540442 Msa0525880:intron 40.0%
!! CTTTTGTCTCCTGGTCTTTT+GGG + chr3_4:79540424-79540443 Msa0525880:intron 40.0%
!! TTTTGTCTCCTGGTCTTTTG+GGG + chr3_4:79540425-79540444 Msa0525880:intron 40.0%
GTTGAGACGTAAGCAGAATA+AGG + chr3_4:79540455-79540474 Msa0525880:intron 40.0%
! ATTTTGTGCCCTGACAATGT+AGG + chr3_4:79540568-79540587 Msa0525880:intron 40.0%
! GTCAAGGTGTTTCAAACTTG+AGG + chr3_4:79540628-79540647 Msa0525880:three_prime_UTR 40.0%
AGGTATGCATTCATGCTTCT+TGG + chr3_4:79540648-79540667 Msa0525880:intron 40.0%
ACGCTCACAAGTCATAAAGA+CGG - chr3_4:79540681-79540700 None:intergenic 40.0%
TTGGCTGTTGCTCTATGAAT+AGG - chr3_4:79540786-79540805 None:intergenic 40.0%
ACCCATCATATAGTAGAGTC+AGG - chr3_4:79540922-79540941 None:intergenic 40.0%
TATATATTTGAGTGCGCAGG+TGG + chr3_4:79541164-79541183 Msa0525880:intron 40.0%
! GGTCAGAAGCTCCAAAATTT+TGG + chr3_4:79541201-79541220 Msa0525880:three_prime_UTR 40.0%
! CTGCTTTAAGTGCAAAACAG+AGG + chr3_4:79541280-79541299 Msa0525880:three_prime_UTR 40.0%
TTTAAGTGCAAAACAGAGGC+AGG + chr3_4:79541284-79541303 Msa0525880:three_prime_UTR 40.0%
TTAAGTGCAAAACAGAGGCA+GGG + chr3_4:79541285-79541304 Msa0525880:three_prime_UTR 40.0%
TGCAGATGATGAATGAACCT+TGG + chr3_4:79541353-79541372 Msa0525880:three_prime_UTR 40.0%
GCTGATGACTGTATTCAAAG+TGG + chr3_4:79541564-79541583 Msa0525880:three_prime_UTR 40.0%
ATCAGAAATGTCGATGGCGA+TGG + chr3_4:79532392-79532411 Msa0525880:exon 45.0%
! GAAGAAGAGCGGTGGATTTA+GGG - chr3_4:79532524-79532543 None:intergenic 45.0%
! AGAAGAAGAGCGGTGGATTT+AGG - chr3_4:79532525-79532544 None:intergenic 45.0%
CGCAATGCAATGCAGGTAAA+AGG - chr3_4:79532580-79532599 None:intergenic 45.0%
AGTGATCATGTAGCCAATGG+TGG - chr3_4:79532966-79532985 None:intergenic 45.0%
! CCATTGGCTACATGATCACT+CGG + chr3_4:79532966-79532985 Msa0525880:intron 45.0%
TCACAAGTGCCTATGTCAGT+AGG + chr3_4:79533218-79533237 Msa0525880:intron 45.0%
ACTGTTCAAGCTTCAGCTTG+TGG + chr3_4:79533445-79533464 Msa0525880:intron 45.0%
!! TGGGGCCCAATGAGTTTTAA+TGG + chr3_4:79533829-79533848 Msa0525880:intron 45.0%
TGGAAGACATGTTTCCAAGC+TGG - chr3_4:79534133-79534152 None:intergenic 45.0%
AAAAAGACGCATGGCTTCTG+TGG - chr3_4:79534153-79534172 None:intergenic 45.0%
GTTGTGTAGGAAGAAGATCC+TGG + chr3_4:79534271-79534290 Msa0525880:intron 45.0%
TGTAGGAAGAAGATCCTGGT+TGG + chr3_4:79534275-79534294 Msa0525880:intron 45.0%
GATGCTCTTGAATACCAACC+AGG - chr3_4:79534292-79534311 None:intergenic 45.0%
! ATGGAAGGCTTTGGTTCAGT+TGG + chr3_4:79534955-79534974 Msa0525880:three_prime_UTR 45.0%
TGGATTGCACCTCCAATATC+TGG + chr3_4:79534991-79535010 Msa0525880:three_prime_UTR 45.0%
TGGATTTGAGAAGCTGGACT+TGG + chr3_4:79535440-79535459 Msa0525880:three_prime_UTR 45.0%
TCAAAGCTTGAGGTTAAGGC+TGG + chr3_4:79535463-79535482 Msa0525880:three_prime_UTR 45.0%
ACAACTTTGGATCCATGTGC+TGG + chr3_4:79535499-79535518 Msa0525880:three_prime_UTR 45.0%
!! GATCCTTCCGAAAGTATCCA+AGG + chr3_4:79535685-79535704 Msa0525880:three_prime_UTR 45.0%
TAGGGAAACTCAAAGTGCAG+AGG - chr3_4:79535872-79535891 None:intergenic 45.0%
TTTCCCTAGTTCAGAGACGA+AGG + chr3_4:79535884-79535903 Msa0525880:intron 45.0%
ACTCCTTCGTCTCTGAACTA+GGG - chr3_4:79535890-79535909 None:intergenic 45.0%
AACTCCTTCGTCTCTGAACT+AGG - chr3_4:79535891-79535910 None:intergenic 45.0%
AAAGACCTATGGGAAACCTC+CGG + chr3_4:79536195-79536214 Msa0525880:three_prime_UTR 45.0%
GCTTTGTAGATATCACGTGG+AGG + chr3_4:79536804-79536823 Msa0525880:intron 45.0%
TGACCTGCATATTCTGGACT+TGG + chr3_4:79536899-79536918 Msa0525880:three_prime_UTR 45.0%
TGGACTTGGAAACCATGACA+TGG + chr3_4:79536913-79536932 Msa0525880:three_prime_UTR 45.0%
GGACTTGGAAACCATGACAT+GGG + chr3_4:79536914-79536933 Msa0525880:three_prime_UTR 45.0%
! GGAATCTCACCTTGTTGTGT+GGG - chr3_4:79537449-79537468 None:intergenic 45.0%
! TGGAATCTCACCTTGTTGTG+TGG - chr3_4:79537450-79537469 None:intergenic 45.0%
! GAGAACTGGTTCATTGTTGG+TGG + chr3_4:79537506-79537525 Msa0525880:three_prime_UTR 45.0%
! AACTGGTTCATTGTTGGTGG+CGG + chr3_4:79537509-79537528 Msa0525880:three_prime_UTR 45.0%
CAAGTCAAACCGAGGTTTGT+AGG + chr3_4:79537895-79537914 Msa0525880:intron 45.0%
! AATGGGTGTGTTGTTCTGTG+TGG + chr3_4:79538389-79538408 Msa0525880:intron 45.0%
TCCCCATCAATTGCCTTATG+AGG + chr3_4:79538415-79538434 Msa0525880:intron 45.0%
CCCTCATAAGGCAATTGATG+GGG - chr3_4:79538419-79538438 None:intergenic 45.0%
CCCCATCAATTGCCTTATGA+GGG + chr3_4:79538416-79538435 Msa0525880:intron 45.0%
!! TACTCTAAGGTGTGGTTACC+TGG + chr3_4:79538776-79538795 Msa0525880:intron 45.0%
!! ACTCTAAGGTGTGGTTACCT+GGG + chr3_4:79538777-79538796 Msa0525880:intron 45.0%
TGTACTGAATATGGCTACCC+TGG + chr3_4:79538919-79538938 Msa0525880:three_prime_UTR 45.0%
ATCAAGGCGATAGCAACGAT+TGG - chr3_4:79539040-79539059 None:intergenic 45.0%
GCTATCGCCTTGATGTCATT+AGG + chr3_4:79539046-79539065 Msa0525880:intron 45.0%
GTTAATCAGTGGGCACTAGA+AGG - chr3_4:79539075-79539094 None:intergenic 45.0%
GTCATTACAGGGCTTGAGTT+TGG + chr3_4:79539110-79539129 Msa0525880:intron 45.0%
GGGATAACAGAGCAGAAATG+GGG - chr3_4:79539229-79539248 None:intergenic 45.0%
GAGCGAGAATGACAAAGCAA+AGG - chr3_4:79539250-79539269 None:intergenic 45.0%
!! TGGATTGCAAGGTCGATTTG+TGG - chr3_4:79539318-79539337 None:intergenic 45.0%
CGGGTAGCATTTGTAGCATT+TGG - chr3_4:79539382-79539401 None:intergenic 45.0%
CGCGATACAGGATCTGAATT+TGG + chr3_4:79539400-79539419 Msa0525880:three_prime_UTR 45.0%
! ACAGGATCTGAATTTGGAGC+AGG + chr3_4:79539406-79539425 Msa0525880:three_prime_UTR 45.0%
! GAATTTGGAGCAGGACATGA+AGG + chr3_4:79539415-79539434 Msa0525880:three_prime_UTR 45.0%
!!! TCCTGGTCTTTTGGGGTAAT+CGG + chr3_4:79540432-79540451 Msa0525880:intron 45.0%
TTGGAGCTCCTACATTGTCA+GGG - chr3_4:79540579-79540598 None:intergenic 45.0%
ATTGGAGCTCCTACATTGTC+AGG - chr3_4:79540580-79540599 None:intergenic 45.0%
CGCTCACAAGTCATAAAGAC+GGG - chr3_4:79540680-79540699 None:intergenic 45.0%
! TTTAGCTTCTATTTGGGCGG+AGG + chr3_4:79541478-79541497 Msa0525880:three_prime_UTR 45.0%
!! GCATCTTACGTCGGTTTGGA+TGG + chr3_4:79532462-79532481 Msa0525880:CDS 50.0%
GCTATAGAGAAGAAGAGCGG+TGG - chr3_4:79532532-79532551 None:intergenic 50.0%
CCGAGTGATCATGTAGCCAA+TGG - chr3_4:79532969-79532988 None:intergenic 50.0%
!! CTGGGTTCTGGGATGTTACA+AGG - chr3_4:79533593-79533612 None:intergenic 50.0%
ACATCCCAGAACCCAGTTCA+TGG + chr3_4:79533597-79533616 Msa0525880:CDS 50.0%
TGATGCAGTTGGAACCAGCT+TGG + chr3_4:79534116-79534135 Msa0525880:intron 50.0%
GGACGTTGACCAGATATTGG+AGG - chr3_4:79535003-79535022 None:intergenic 50.0%
ACGTCCAAAAGCCCGATATG+AGG + chr3_4:79535017-79535036 Msa0525880:three_prime_UTR 50.0%
TAAACGCACTTGGCTTAGGG+AGG - chr3_4:79535112-79535131 None:intergenic 50.0%
! CTGGACTTGGTCAAAGCTTG+AGG + chr3_4:79535453-79535472 Msa0525880:three_prime_UTR 50.0%
CGACGAGTCCTCTACAACTT+TGG + chr3_4:79535486-79535505 Msa0525880:three_prime_UTR 50.0%
! TCCATGTGCTGGCCATTCTT+TGG + chr3_4:79535510-79535529 Msa0525880:three_prime_UTR 50.0%
ACCAAAGAATGGCCAGCACA+TGG - chr3_4:79535514-79535533 None:intergenic 50.0%
! GGAAGGATCTTTTGTGTGGC+CGG - chr3_4:79535674-79535693 None:intergenic 50.0%
GGAAACTCAAAGTGCAGAGG+CGG - chr3_4:79535869-79535888 None:intergenic 50.0%
ACATACCGGAGGTTTCCCAT+AGG - chr3_4:79536203-79536222 None:intergenic 50.0%
AAGGAGAAGAGAGAGGGAGT+GGG - chr3_4:79536588-79536607 None:intergenic 50.0%
AAAGGAGAAGAGAGAGGGAG+TGG - chr3_4:79536589-79536608 None:intergenic 50.0%
! TTGGTGGGCAAGATGCAAAG+AGG + chr3_4:79536865-79536884 Msa0525880:three_prime_UTR 50.0%
GTATGATCAGACCTTGGGGA+AGG - chr3_4:79537233-79537252 None:intergenic 50.0%
AGCGGTATGATCAGACCTTG+GGG - chr3_4:79537237-79537256 None:intergenic 50.0%
CAGCGGTATGATCAGACCTT+GGG - chr3_4:79537238-79537257 None:intergenic 50.0%
TCATACCGCTGCTGTACATG+TGG + chr3_4:79537247-79537266 Msa0525880:three_prime_UTR 50.0%
GACATGCTGGTGTGACAGTA+GGG + chr3_4:79537483-79537502 Msa0525880:three_prime_UTR 50.0%
ACATGCTGGTGTGACAGTAG+GGG + chr3_4:79537484-79537503 Msa0525880:three_prime_UTR 50.0%
! GGGGAGAACTGGTTCATTGT+TGG + chr3_4:79537503-79537522 Msa0525880:three_prime_UTR 50.0%
GAAGCCCCTGCAGAATAACA+AGG - chr3_4:79538890-79538909 None:intergenic 50.0%
TGAATATGGCTACCCTGGCT+TGG + chr3_4:79538924-79538943 Msa0525880:three_prime_UTR 50.0%
TGTTACCACTGACCAAGCCA+GGG - chr3_4:79538939-79538958 None:intergenic 50.0%
ATGTTACCACTGACCAAGCC+AGG - chr3_4:79538940-79538959 None:intergenic 50.0%
! GCGTGTTTCTGTTGCTAGTG+AGG + chr3_4:79538970-79538989 Msa0525880:three_prime_UTR 50.0%
!! TGCAAGGTCGATTTGTGGCT+TGG - chr3_4:79539313-79539332 None:intergenic 50.0%
GGCAGAAACACTGTCTGGTA+TGG - chr3_4:79539356-79539375 None:intergenic 50.0%
ACAAATGCTACCCGCGATAC+AGG + chr3_4:79539388-79539407 Msa0525880:three_prime_UTR 50.0%
GATCTACGCTTGTGAGCCAA+AGG - chr3_4:79539643-79539662 None:intergenic 50.0%
GGCAGAACATGCAGAGTTTG+AGG - chr3_4:79539945-79539964 None:intergenic 50.0%
GTTCTTCTCTCTCAGCCTTC+AGG - chr3_4:79540093-79540112 None:intergenic 50.0%
!!! CCTGGTCTTTTGGGGTAATC+GGG + chr3_4:79540433-79540452 Msa0525880:intron 50.0%
TAGGAGCTCCAATCAGTACG+TGG + chr3_4:79540587-79540606 Msa0525880:intron 50.0%
GTGGCATTTGCCTCCTTTCA+TGG + chr3_4:79541076-79541095 Msa0525880:intron 50.0%
TTGCCTCCTTTCATGGACGA+AGG + chr3_4:79541083-79541102 Msa0525880:intron 50.0%
CTTCCTTCGTCCATGAAAGG+AGG - chr3_4:79541089-79541108 None:intergenic 50.0%
CCACTTCCTTCGTCCATGAA+AGG - chr3_4:79541092-79541111 None:intergenic 50.0%
CCTTTCATGGACGAAGGAAG+TGG + chr3_4:79541089-79541108 Msa0525880:intron 50.0%
ATATTTGAGTGCGCAGGTGG+AGG + chr3_4:79541167-79541186 Msa0525880:intron 50.0%
CAGGTGGAGGTTGCTGAATT+AGG + chr3_4:79541180-79541199 Msa0525880:intron 50.0%
TCATCATCTGCATTCTGGCC+AGG - chr3_4:79541345-79541364 None:intergenic 50.0%
TCCAGAACGGTTCTACGCTG+CGG + chr3_4:79532440-79532459 Msa0525880:CDS 55.0%
TACGCTGCGGCATCTTACGT+CGG + chr3_4:79532453-79532472 Msa0525880:CDS 55.0%
! TGCGGCATCTTACGTCGGTT+TGG + chr3_4:79532458-79532477 Msa0525880:CDS 55.0%
TGGAGCATAGCAAATGGGCC+AGG + chr3_4:79533627-79533646 Msa0525880:CDS 55.0%
TTGTGTGGCCGGCAATTGAC+AGG - chr3_4:79535663-79535682 None:intergenic 55.0%
AGGAGAAGAGAGAGGGAGTG+GGG - chr3_4:79536587-79536606 None:intergenic 55.0%
GGCCAATCAGTGTCCCTTGT+CGG + chr3_4:79536825-79536844 Msa0525880:three_prime_UTR 55.0%
GCCAATCAGTGTCCCTTGTC+GGG + chr3_4:79536826-79536845 Msa0525880:three_prime_UTR 55.0%
TCCCGACAAGGGACACTGAT+TGG - chr3_4:79536830-79536849 None:intergenic 55.0%
TGATCAGACCTTGGGGAAGG+AGG - chr3_4:79537230-79537249 None:intergenic 55.0%
GCAGCGGTATGATCAGACCT+TGG - chr3_4:79537239-79537258 None:intergenic 55.0%
TCGGTCCACATGTACAGCAG+CGG - chr3_4:79537255-79537274 None:intergenic 55.0%
TGGTCTCGTCCCACACAACA+AGG + chr3_4:79537437-79537456 Msa0525880:three_prime_UTR 55.0%
GGACATGCTGGTGTGACAGT+AGG + chr3_4:79537482-79537501 Msa0525880:three_prime_UTR 55.0%
GTGTGACAGTAGGGGAGAAC+TGG + chr3_4:79537492-79537511 Msa0525880:three_prime_UTR 55.0%
TTCTGCAGGGGCTTCAGAGA+CGG + chr3_4:79538895-79538914 Msa0525880:intron 55.0%
CCCGATTACCCCAAAAGACC+AGG - chr3_4:79540436-79540455 None:intergenic 55.0%
! CGAGCTGACCACGTACTGAT+TGG - chr3_4:79540598-79540617 None:intergenic 55.0%
AGGAGCTTGAACTCCTCCAG+CGG + chr3_4:79541235-79541254 Msa0525880:three_prime_UTR 55.0%
TGAACTCCTCCAGCGGCAAA+AGG + chr3_4:79541242-79541261 Msa0525880:three_prime_UTR 55.0%
! TGCATTCTGGCCAGGAGTAC+CGG - chr3_4:79541337-79541356 None:intergenic 55.0%
GCGATGGCGAGAGCAAGTTC+TGG + chr3_4:79532408-79532427 Msa0525880:CDS 60.0%
GAGTCAACAGCGGCCACCAT+TGG + chr3_4:79532950-79532969 Msa0525880:intron 60.0%
GGAGAAGAGAGAGGGAGTGG+GGG - chr3_4:79536586-79536605 None:intergenic 60.0%
GAGATTCCAACGCCACGTGC+AGG + chr3_4:79537461-79537480 Msa0525880:three_prime_UTR 60.0%
ACACCAGCATGTCCTGCACG+TGG - chr3_4:79537476-79537495 None:intergenic 60.0%
! GGTGGCGGTGACAACAAGAG+CGG + chr3_4:79537524-79537543 Msa0525880:three_prime_UTR 60.0%
CGCGCCGCGTGTACATCAAA+TGG - chr3_4:79537658-79537677 None:intergenic 60.0%
GGGACGGCAGAAACACTGTC+TGG - chr3_4:79539361-79539380 None:intergenic 60.0%
AGCTCGCTGCTGAGCAGTCA+AGG + chr3_4:79540612-79540631 Msa0525880:three_prime_UTR 60.0%
! ATGCAGCCTTTTGCCGCTGG+AGG - chr3_4:79541251-79541270 None:intergenic 60.0%
! CTGATGCAGCCTTTTGCCGC+TGG - chr3_4:79541254-79541273 None:intergenic 60.0%
GCAAAACAGAGGCAGGGCTC+AGG + chr3_4:79541291-79541310 Msa0525880:three_prime_UTR 60.0%
AAACAGAGGCAGGGCTCAGG+TGG + chr3_4:79541294-79541313 Msa0525880:three_prime_UTR 60.0%
GCCGCAGCGTAGAACCGTTC+TGG - chr3_4:79532444-79532463 None:intergenic 65.0%
AGAGAGAGGGAGTGGGGGCA+TGG - chr3_4:79536581-79536600 None:intergenic 65.0%
GCATGTCCTGCACGTGGCGT+TGG - chr3_4:79537470-79537489 None:intergenic 65.0%
ACGCCACGTGCAGGACATGC+TGG + chr3_4:79537470-79537489 Msa0525880:three_prime_UTR 65.0%
!! GGCTACCCTGGCTTGGTCAG+TGG + chr3_4:79538931-79538950 Msa0525880:three_prime_UTR 65.0%
!! GGTTGGCTTGCCGGTACTCC+TGG + chr3_4:79541324-79541343 Msa0525880:three_prime_UTR 65.0%
! GCGGAGTGCCTCCTTCCCCA+AGG + chr3_4:79537219-79537238 Msa0525880:intron 70.0%
ACGCGGCGCGCCTATGCTGT+GGG + chr3_4:79537668-79537687 Msa0525880:intron 70.0%
GCAGGGCTCAGGTGGCGTGT+GGG + chr3_4:79541302-79541321 Msa0525880:three_prime_UTR 70.0%
CAGGGCTCAGGTGGCGTGTG+GGG + chr3_4:79541303-79541322 Msa0525880:three_prime_UTR 70.0%
GCTCAGGTGGCGTGTGGGGT+TGG + chr3_4:79541307-79541326 Msa0525880:three_prime_UTR 70.0%
!! GGCGTGTGGGGTTGGCTTGC+CGG + chr3_4:79541315-79541334 Msa0525880:three_prime_UTR 70.0%
CACGCGGCGCGCCTATGCTG+TGG + chr3_4:79537667-79537686 Msa0525880:intron 75.0%
GGCAGGGCTCAGGTGGCGTG+TGG + chr3_4:79541301-79541320 Msa0525880:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 79532143 79541633 79532143 ID=Msa0525880;Name=Msa0525880
chr3_4 mRNA 79532143 79541633 79532143 ID=Msa0525880-mRNA-1;Parent=Msa0525880;Name=Msa0525880-mRNA-1;_AED=0.09;_eAED=0.09;_QI=256|0.93|1|1|1|1|17|1905|96
chr3_4 exon 79532143 79532563 79532143 ID=Msa0525880-mRNA-1:exon:23819;Parent=Msa0525880-mRNA-1
chr3_4 exon 79533578 79533648 79533578 ID=Msa0525880-mRNA-1:exon:23820;Parent=Msa0525880-mRNA-1
chr3_4 exon 79534280 79534351 79534280 ID=Msa0525880-mRNA-1:exon:23821;Parent=Msa0525880-mRNA-1
chr3_4 exon 79534844 79535038 79534844 ID=Msa0525880-mRNA-1:exon:23822;Parent=Msa0525880-mRNA-1
chr3_4 exon 79535141 79535218 79535141 ID=Msa0525880-mRNA-1:exon:23823;Parent=Msa0525880-mRNA-1
chr3_4 exon 79535436 79535531 79535436 ID=Msa0525880-mRNA-1:exon:23824;Parent=Msa0525880-mRNA-1
chr3_4 exon 79535640 79535706 79535640 ID=Msa0525880-mRNA-1:exon:23825;Parent=Msa0525880-mRNA-1
chr3_4 exon 79536155 79536216 79536155 ID=Msa0525880-mRNA-1:exon:23826;Parent=Msa0525880-mRNA-1
chr3_4 exon 79536813 79536952 79536813 ID=Msa0525880-mRNA-1:exon:23827;Parent=Msa0525880-mRNA-1
chr3_4 exon 79537220 79537346 79537220 ID=Msa0525880-mRNA-1:exon:23828;Parent=Msa0525880-mRNA-1
chr3_4 exon 79537431 79537545 79537431 ID=Msa0525880-mRNA-1:exon:23829;Parent=Msa0525880-mRNA-1
chr3_4 exon 79538903 79538991 79538903 ID=Msa0525880-mRNA-1:exon:23830;Parent=Msa0525880-mRNA-1
chr3_4 exon 79539120 79539203 79539120 ID=Msa0525880-mRNA-1:exon:23831;Parent=Msa0525880-mRNA-1
chr3_4 exon 79539295 79539477 79539295 ID=Msa0525880-mRNA-1:exon:23832;Parent=Msa0525880-mRNA-1
chr3_4 exon 79540064 79540204 79540064 ID=Msa0525880-mRNA-1:exon:23833;Parent=Msa0525880-mRNA-1
chr3_4 exon 79540590 79540649 79540590 ID=Msa0525880-mRNA-1:exon:23834;Parent=Msa0525880-mRNA-1
chr3_4 exon 79541183 79541633 79541183 ID=Msa0525880-mRNA-1:exon:23835;Parent=Msa0525880-mRNA-1
chr3_4 five_prime_UTR 79532143 79532398 79532143 ID=Msa0525880-mRNA-1:five_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 CDS 79532399 79532563 79532399 ID=Msa0525880-mRNA-1:cds;Parent=Msa0525880-mRNA-1
chr3_4 CDS 79533578 79533648 79533578 ID=Msa0525880-mRNA-1:cds;Parent=Msa0525880-mRNA-1
chr3_4 CDS 79534280 79534334 79534280 ID=Msa0525880-mRNA-1:cds;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79534335 79534351 79534335 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79534844 79535038 79534844 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79535141 79535218 79535141 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79535436 79535531 79535436 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79535640 79535706 79535640 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79536155 79536216 79536155 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79536813 79536952 79536813 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79537220 79537346 79537220 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79537431 79537545 79537431 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79538903 79538991 79538903 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79539120 79539203 79539120 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79539295 79539477 79539295 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79540064 79540204 79540064 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79540590 79540649 79540590 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
chr3_4 three_prime_UTR 79541183 79541633 79541183 ID=Msa0525880-mRNA-1:three_prime_utr;Parent=Msa0525880-mRNA-1
Gene Sequence

>Msa0525880

ATGTCGATGGCGATGGCGAGAGCAAGTTCTGGTTTGCAATATCCAGAACGGTTCTACGCTGCGGCATCTTACGTCGGTTTGGATGGATCCAATTCTCCAACTAAATCTCTTACATCTAAATTCCCTAAATCCACCGCTCTTCTTCTCTATAGCTTATATCAACAGGCTAGTGTAGGACCTTGTAACATCCCAGAACCCAGTTCATGGAAAATTGTGGAGCATAGCAAATGGGCCAGGAAGAAGATCCTGGTTGGTATTCAAGAGCATCTAACTCTTTTGCAGAGCCTGTAA
Protein sequence

>Msa0525880

MSMAMARASSGLQYPERFYAAASYVGLDGSNSPTKSLTSKFPKSTALLLYSLYQQASVGPCNIPEPSSWKIVEHSKWARKKILVGIQEHLTLLQSL*