AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1016000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016000 MtrunA17_Chr7g0230141 97.398 269 7 0 1 269 1 269 0.0 544
Msa1016000 MtrunA17_Chr7g0230141 76.522 230 5 3 295 475 41 270 4.69e-111 329
Msa1016000 MtrunA17_Chr7g0230151 71.014 276 73 2 1 269 1 276 3.91e-144 413
Msa1016000 MtrunA17_Chr7g0230151 54.008 237 53 5 295 475 41 277 9.99e-73 231
Msa1016000 MtrunA17_Chr6g0458341 65.041 246 86 0 2 247 4 249 1.04e-114 338
Msa1016000 MtrunA17_Chr6g0458341 49.580 238 62 5 295 475 43 279 5.96e-61 200
Msa1016000 MtrunA17_Chr6g0458361 58.403 238 92 2 34 269 19 251 1.75e-95 289
Msa1016000 MtrunA17_Chr6g0458361 48.052 231 64 5 295 474 26 251 2.27e-57 190
Msa1016000 MtrunA17_Chr6g0458381 49.189 185 64 3 114 269 2 185 1.48e-52 175
Msa1016000 MtrunA17_Chr6g0458381 43.396 106 40 3 390 475 81 186 5.59e-18 82.0
Msa1016000 MtrunA17_Chr6g0458371 61.404 114 44 0 1 114 1 114 6.47e-43 149
Msa1016000 MtrunA17_Chr6g0458371 64.865 74 25 1 295 367 41 114 1.15e-22 94.7
Msa1016000 MtrunA17_Chr6g0458351 69.048 42 13 0 1 42 1 42 1.41e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016000 AT5G40670.1 69.517 269 78 2 1 269 1 265 1.10e-134 389
Msa1016000 AT5G40670.1 55.814 215 44 4 295 460 41 253 3.26e-67 217

Find 60 sgRNAs with CRISPR-Local

Find 563 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTCACAAACCTCTTTC+TGG 0.134131 7_1:+31145678 None:intergenic
AAAATTCACAAACCTCTTTC+TGG 0.134131 7_1:+31152755 None:intergenic
CTTTATAACATTATATAAAA+AGG 0.176506 7_1:+31141542 None:intergenic
TTGCATTGCACAATCATAAT+TGG 0.222203 7_1:-31150615 Msa1016000:CDS
CATGTCTCTTATGAAGCTTT+AGG 0.224216 7_1:-31153069 Msa1016000:CDS
GGTTCTTGGGTGAACTTCTA+TGG 0.256402 7_1:-31149732 Msa1016000:CDS
ATGTCTCTTATGAAGCTTTA+GGG 0.295292 7_1:-31153068 Msa1016000:CDS
TAACATCATAGATTGCAATT+TGG 0.357252 7_1:+31142986 None:intergenic
TAACATCATAGATTGCAATT+TGG 0.357252 7_1:+31150814 None:intergenic
GTACTGATGGATGGAGCATT+TGG 0.371191 7_1:-31142091 Msa1016000:CDS
GTACTGATGGATGGAGCATT+TGG 0.371191 7_1:-31149914 Msa1016000:CDS
AGAAATCGATCATGTCTTCT+TGG 0.379460 7_1:-31153107 Msa1016000:exon
AGAACTATATTTGAGAATTG+AGG 0.427451 7_1:+31141498 None:intergenic
TCTTAAACTTTCGCAGGAAA+AGG 0.446843 7_1:-31145919 Msa1016000:CDS
TCTTAAACTTTCGCAGGAAA+AGG 0.446843 7_1:-31152999 Msa1016000:intron
GAACTATATTTGAGAATTGA+GGG 0.449381 7_1:+31141499 None:intergenic
TTGTGTTTGATTAGTGTGGT+TGG 0.463223 7_1:-31145812 Msa1016000:intron
TTGTGTTTGATTAGTGTGGT+TGG 0.463223 7_1:-31152892 Msa1016000:intron
GAGCATTTGGAACATTCTAC+TGG 0.464204 7_1:-31142078 Msa1016000:CDS
GAGCATTTGGAACATTCTAC+TGG 0.464204 7_1:-31149901 Msa1016000:CDS
ATATTAGTGACCTTGATCAA+TGG 0.482678 7_1:+31142010 None:intergenic
ATATTAGTGACCTTGATCAA+TGG 0.482678 7_1:+31149833 None:intergenic
CAAGTCTTCTGCTCAGACAT+TGG 0.485895 7_1:-31141639 Msa1016000:CDS
GACTTGACATTATCAAAGTC+AGG 0.487582 7_1:+31149482 None:intergenic
GTGAACTTCTATGGAAACAT+AGG 0.490156 7_1:-31149723 Msa1016000:CDS
GACTTGGCATTATCAAAGTC+AGG 0.493047 7_1:+31141656 None:intergenic
CAATGTCTGAGCAGAAGACT+TGG 0.496767 7_1:+31141640 None:intergenic
GGTAGCAAACTATGCACAAA+TGG 0.504062 7_1:-31142042 Msa1016000:CDS
GGTAGCAAACTATGCACAAA+TGG 0.504062 7_1:-31149865 Msa1016000:CDS
GGTCGTAAAATATATTCCTC+AGG 0.510399 7_1:-31150438 Msa1016000:intron
AAGTGATCTTAAACTTTCGC+AGG 0.514012 7_1:-31145925 Msa1016000:CDS
AAGTGATCTTAAACTTTCGC+AGG 0.514012 7_1:-31153005 Msa1016000:CDS
TGCACAATCATAATTGGCTA+TGG 0.516672 7_1:-31150609 Msa1016000:CDS
AGGGAAACTATTGCTATCCT+TGG 0.525698 7_1:-31149703 Msa1016000:intron
CAACAATATAGAGATAAATA+CGG 0.527348 7_1:-31145701 Msa1016000:CDS
GCAACATCATTTGCTGCCAC+TGG 0.537971 7_1:+31143051 None:intergenic
GCAACATCATTTGCTGCCAC+TGG 0.537971 7_1:+31150879 None:intergenic
CAACAATATAGAGATAAATA+CGG 0.539767 7_1:-31152778 Msa1016000:CDS
CAGGATATAACACATAATGT+TGG 0.552953 7_1:+31141705 None:intergenic
CAGGATATAACACATAATGT+TGG 0.552953 7_1:+31149531 None:intergenic
TGTTCTGTATTAATATATGT+CGG 0.557585 7_1:-31141590 Msa1016000:three_prime_UTR
TGAACTTCTATGGAAACATA+GGG 0.561333 7_1:-31149722 Msa1016000:CDS
GCTATGCAATCCATTGATCA+AGG 0.566651 7_1:-31142020 Msa1016000:intron
GCTATGCAATCCATTGATCA+AGG 0.566651 7_1:-31149843 Msa1016000:intron
AGATAAATACGGCCAGAAAG+AGG 0.569324 7_1:-31145690 Msa1016000:intron
AGATAAATACGGCCAGAAAG+AGG 0.569324 7_1:-31152767 Msa1016000:intron
GCTTCATAAGAGACATGAAG+TGG 0.576703 7_1:+31153075 None:intergenic
TATCATTCAAGTTTCTATGA+CGG 0.577201 7_1:-31150459 Msa1016000:CDS
CATAATGTTGGATGATGAAG+AGG 0.579723 7_1:+31141717 None:intergenic
CATAATGTTGGATGATGAAG+AGG 0.579723 7_1:+31149543 None:intergenic
CAAGTCTTCTGATCAGACAT+TGG 0.583223 7_1:-31149465 Msa1016000:CDS
CGAAAGTTTAAGATCACTTG+AGG 0.587893 7_1:+31145929 None:intergenic
CGAAAGTTTAAGATCACTTG+AGG 0.587893 7_1:+31153009 None:intergenic
TCTCTTATGAAGCTTTAGGG+TGG 0.598428 7_1:-31153065 Msa1016000:CDS
AAAGTATCTAAAATTGCTTG+TGG 0.608644 7_1:-31142854 Msa1016000:CDS
AAAGTATCTAAAATTGCTTG+TGG 0.608644 7_1:-31150682 Msa1016000:CDS
GTGGAATAGTCACTGTTGCA+TGG 0.616465 7_1:-31142835 Msa1016000:CDS
GTGGAATAGTCACTGTTGCA+TGG 0.616465 7_1:-31150663 Msa1016000:CDS
CTGCTGTTAGTAGTACTGCA+TGG 0.622593 7_1:+31143019 None:intergenic
CTGCTGTTAGTAGTACTGCA+TGG 0.630929 7_1:+31150847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATATTTTAAAAAAAT+AGG + chr7_1:31147181-31147200 None:intergenic 0.0%
!! AATAAAAAAAAATAAAAAAT+GGG + chr7_1:31148147-31148166 None:intergenic 0.0%
!! AAATAAAAAAAAATAAAAAA+TGG + chr7_1:31148148-31148167 None:intergenic 0.0%
!! AATAAATATATTGAATTGAA+TGG + chr7_1:31141890-31141909 None:intergenic 10.0%
!! AAAAAAAAAACATAAAAAAG+AGG + chr7_1:31143397-31143416 None:intergenic 10.0%
!! AAAATAATAATTAAGCTAAA+TGG + chr7_1:31143840-31143859 None:intergenic 10.0%
!!! ATTTTTTAAGTTATATTTGT+TGG - chr7_1:31145912-31145931 Msa1016000:CDS 10.0%
!! AAAAATATTAAGTAAAAAAG+TGG + chr7_1:31146516-31146535 None:intergenic 10.0%
!!! TATTTTAAAAAAATAGGAAA+CGG + chr7_1:31147175-31147194 None:intergenic 10.0%
!! TAATAATATCATAAAAACAA+TGG + chr7_1:31148748-31148767 None:intergenic 10.0%
!! AATAAATATATTGAATTGAA+TGG + chr7_1:31141890-31141909 None:intergenic 10.0%
!! TAATTTAACATCAATAATAA+AGG + chr7_1:31148992-31149011 None:intergenic 10.0%
!! AATGAGATATTAAATAAATA+AGG - chr7_1:31149162-31149181 Msa1016000:intron 10.0%
!!! AAGGAATTAATATTTTAAAA+AGG - chr7_1:31142671-31142690 Msa1016000:intron 10.0%
!!! ATTTTTAAATGTCTTTTTTA+GGG - chr7_1:31150579-31150598 Msa1016000:intron 10.0%
!! AAAAAAAAATATGAATTTGT+TGG - chr7_1:31150745-31150764 Msa1016000:intron 10.0%
!! AAAAAAAAAACATAAAAAAG+AGG + chr7_1:31143397-31143416 None:intergenic 10.0%
!! TATATGCTAATATTTATAAT+CGG - chr7_1:31151231-31151250 Msa1016000:intron 10.0%
!! AAAATTAAGAACAAAAATAA+GGG + chr7_1:31151426-31151445 None:intergenic 10.0%
!! CTTTATAACATTATATAAAA+AGG + chr7_1:31153073-31153092 None:intergenic 10.0%
!! ATATCATAAAAAAATTGGTA+AGG + chr7_1:31141663-31141682 None:intergenic 15.0%
!! CAATTTAACATGAATAATAA+AGG + chr7_1:31141915-31141934 None:intergenic 15.0%
!! AAAAACATTAAACTATCATA+TGG - chr7_1:31142234-31142253 Msa1016000:intron 15.0%
!!! AGTAATTTTTTCTTGTAAAT+AGG + chr7_1:31142416-31142435 None:intergenic 15.0%
!!! TACAAGAAAAAATTACTTTT+TGG - chr7_1:31142419-31142438 Msa1016000:intron 15.0%
!!! TTGTTTCTTATAAATAAGAT+CGG - chr7_1:31142518-31142537 Msa1016000:intron 15.0%
!!! TTATCATTTTACAATTTTTG+AGG - chr7_1:31142608-31142627 Msa1016000:intron 15.0%
!! TAAAAGTCAAAAAGAAAAAA+AGG - chr7_1:31142652-31142671 Msa1016000:intron 15.0%
!! TATCAAAAAGATAGTTAAAT+AGG + chr7_1:31142778-31142797 None:intergenic 15.0%
!! TAATTGTTAAAAATTTCAAG+TGG - chr7_1:31142955-31142974 Msa1016000:intron 15.0%
!!! TTTTATTTTTTTGAACATTC+AGG + chr7_1:31143022-31143041 None:intergenic 15.0%
!! GCAAAAAAATATGAATTTAT+TGG - chr7_1:31143168-31143187 Msa1016000:intron 15.0%
!! AAAAAATATGAATTTATTGG+TGG - chr7_1:31143171-31143190 Msa1016000:intron 15.0%
!! TTAAACATGAACAAAAATAA+GGG + chr7_1:31143654-31143673 None:intergenic 15.0%
!! TTTAAACATGAACAAAAATA+AGG + chr7_1:31143655-31143674 None:intergenic 15.0%
!!! TTTTCTAACATTATATAAGA+AGG + chr7_1:31145246-31145265 None:intergenic 15.0%
!! GTTAAATATTTCTTGTAAAT+AGG + chr7_1:31146191-31146210 None:intergenic 15.0%
!!! TTTTTAAAACTATGTTTTCA+AGG + chr7_1:31146590-31146609 None:intergenic 15.0%
!! ATACAAAGATAAAAACTATA+TGG + chr7_1:31146729-31146748 None:intergenic 15.0%
!!! AAAACTAATGCAAATTTTTT+CGG + chr7_1:31148190-31148209 None:intergenic 15.0%
!!! TTTTTATGATTTTATTTGAG+AGG - chr7_1:31148238-31148257 Msa1016000:intron 15.0%
!!! TACCAAAAAAGTATATATAT+TGG - chr7_1:31148489-31148508 Msa1016000:intron 15.0%
!! TTAGTTTAATAATTGACAAA+TGG - chr7_1:31150312-31150331 Msa1016000:intron 15.0%
!!! CATTTTTAAATGTCTTTTTT+AGG - chr7_1:31150578-31150597 Msa1016000:intron 15.0%
!!! TTTTTAAATGTCTTTTTTAG+GGG - chr7_1:31150580-31150599 Msa1016000:intron 15.0%
!! AAATTAAGAACAAAAATAAG+GGG + chr7_1:31151425-31151444 None:intergenic 15.0%
!! CAAAATTAAGAACAAAAATA+AGG + chr7_1:31151427-31151446 None:intergenic 15.0%
!! AGAATAAAAATTAAGCTAAA+TGG + chr7_1:31151668-31151687 None:intergenic 15.0%
!! CAACAATATAGAGATAAATA+CGG - chr7_1:31141834-31141853 Msa1016000:intron 20.0%
!! TTATAGTATATGAATGAACT+CGG - chr7_1:31142162-31142181 Msa1016000:intron 20.0%
!!! TCCTTTTTAAATGTCTTTTT+AGG - chr7_1:31142739-31142758 Msa1016000:intron 20.0%
!!! CCTTTTTAAATGTCTTTTTA+GGG - chr7_1:31142740-31142759 Msa1016000:intron 20.0%
!!! CTTTTTAAATGTCTTTTTAG+GGG - chr7_1:31142741-31142760 Msa1016000:intron 20.0%
!!! CAAAATTTTGTTACAAACAA+TGG - chr7_1:31142905-31142924 Msa1016000:intron 20.0%
!!! TTTATTGGTGGATTAAAATA+AGG - chr7_1:31143183-31143202 Msa1016000:intron 20.0%
!! GGATTAAAATAAGGTATAAT+AGG - chr7_1:31143192-31143211 Msa1016000:intron 20.0%
!! TAAACATGAACAAAAATAAG+GGG + chr7_1:31143653-31143672 None:intergenic 20.0%
!!! TTTTGAATTTTGATGCATTA+TGG - chr7_1:31144072-31144091 Msa1016000:intron 20.0%
!!! TGTTTTGTATTAATATCTGT+CGG - chr7_1:31145196-31145215 Msa1016000:intron 20.0%
!!! AAATATAGTTCTAACTTCTA+AGG - chr7_1:31145298-31145317 Msa1016000:intron 20.0%
!! ATGGATGAATTAAACTAAAA+GGG + chr7_1:31145509-31145528 None:intergenic 20.0%
!! TATGGATGAATTAAACTAAA+AGG + chr7_1:31145510-31145529 None:intergenic 20.0%
!!! TTTTAGTTTAATTCATCCAT+AGG - chr7_1:31145509-31145528 Msa1016000:intron 20.0%
!!! TCTATTTTAAAGATTGTTGT+TGG - chr7_1:31145861-31145880 Msa1016000:intron 20.0%
!!! AATCATGGACAATTTAAAAT+TGG - chr7_1:31146127-31146146 Msa1016000:intron 20.0%
!! GATTGTATAAATGATGTATT+TGG - chr7_1:31146221-31146240 Msa1016000:intron 20.0%
!! GTAAATGAAATAAACACTAA+GGG + chr7_1:31146414-31146433 None:intergenic 20.0%
!! TGTAAATGAAATAAACACTA+AGG + chr7_1:31146415-31146434 None:intergenic 20.0%
!!! GAAAACATAGTTTTAAAAAC+CGG - chr7_1:31146591-31146610 Msa1016000:intron 20.0%
!! ATTGTAGTTATGATATAATC+AGG + chr7_1:31147505-31147524 None:intergenic 20.0%
!!! TGGCATTTTTAGAAAAAATA+GGG + chr7_1:31147666-31147685 None:intergenic 20.0%
!!! ATGGCATTTTTAGAAAAAAT+AGG + chr7_1:31147667-31147686 None:intergenic 20.0%
!!! TAAAAATGCCATTAAGTTTT+CGG - chr7_1:31147675-31147694 Msa1016000:intron 20.0%
!! TATAAAATCCGAAAACTTAA+TGG + chr7_1:31147686-31147705 None:intergenic 20.0%
!!! ATGGTGTTTTCTTTTATTAA+TGG - chr7_1:31147713-31147732 Msa1016000:intron 20.0%
!!! TTTTTTCGAATTTTGTAATC+CGG - chr7_1:31147755-31147774 Msa1016000:intron 20.0%
!! TTCTAAATATGTTTGTAACA+TGG - chr7_1:31147901-31147920 Msa1016000:intron 20.0%
!!! TAACATGGATATTCATTTTA+GGG - chr7_1:31147916-31147935 Msa1016000:intron 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG + chr7_1:31148051-31148070 None:intergenic 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG + chr7_1:31148052-31148071 None:intergenic 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - chr7_1:31148051-31148070 Msa1016000:intron 20.0%
!!! GCATTTTTGAAAATTTTACA+GGG - chr7_1:31148428-31148447 Msa1016000:intron 20.0%
!!! TGCCAATATATATACTTTTT+TGG + chr7_1:31148494-31148513 None:intergenic 20.0%
!! TATATATTGGCAACATATAT+TGG - chr7_1:31148502-31148521 Msa1016000:intron 20.0%
!! TACCAAAAAAGTTCATTATT+TGG - chr7_1:31148543-31148562 Msa1016000:intron 20.0%
!! ACCAAAAAAGTTCATTATTT+GGG - chr7_1:31148544-31148563 Msa1016000:intron 20.0%
!! ATATCATAAAAACAATGGTA+AGG + chr7_1:31148743-31148762 None:intergenic 20.0%
!! CAACAATATAGAGATAAATA+CGG - chr7_1:31141834-31141853 Msa1016000:intron 20.0%
!!! ATTACCCTTATTTATTATTG+TGG - chr7_1:31149123-31149142 Msa1016000:intron 20.0%
!! TCAAAATGTGACAATTAAAA+AGG - chr7_1:31149259-31149278 Msa1016000:intron 20.0%
!! ACTGTTATATTATATGAACT+CGG - chr7_1:31149491-31149510 Msa1016000:CDS 20.0%
!! AATTCAAGAGAAATGATATT+TGG - chr7_1:31149698-31149717 Msa1016000:intron 20.0%
!! AAAAGAATATAGAGAGAAAA+AGG + chr7_1:31149793-31149812 None:intergenic 20.0%
!!! TTTTTGACCAATAAAAAGAA+AGG - chr7_1:31149809-31149828 Msa1016000:intron 20.0%
!!! TTACTTTCCTTTCTTTTTAT+TGG + chr7_1:31149819-31149838 None:intergenic 20.0%
!! AATAAAAAGAAAGGAAAGTA+AGG - chr7_1:31149818-31149837 Msa1016000:intron 20.0%
!!! CTTCTTTTAATTAAGAGTAA+TGG + chr7_1:31149881-31149900 None:intergenic 20.0%
!! CATTGAATAATTTATGTATC+TGG + chr7_1:31142483-31142502 None:intergenic 20.0%
!! AAAAAAAAACAGGAATTTGT+TGG + chr7_1:31150135-31150154 None:intergenic 20.0%
!! ACTAATACATGCTATATATT+TGG + chr7_1:31150297-31150316 None:intergenic 20.0%
!! AAAAGTCAAAAAGAAAAAGA+AGG - chr7_1:31150490-31150509 Msa1016000:intron 20.0%
!! TACAGAAAAGAAAGTAAAAT+AGG + chr7_1:31150617-31150636 None:intergenic 20.0%
!! GCAACAAAATATGAATTTAT+TGG - chr7_1:31150847-31150866 Msa1016000:CDS 20.0%
!! ACAAAATATGAATTTATTGG+TGG - chr7_1:31150850-31150869 Msa1016000:CDS 20.0%
!!! TGATTTTTTTTGAACATCTA+AGG - chr7_1:31151445-31151464 Msa1016000:intron 20.0%
!!! GATTTTTTTTGAACATCTAA+GGG - chr7_1:31151446-31151465 Msa1016000:intron 20.0%
!! AAAATTAAGCTAAATGGTAA+AGG + chr7_1:31151662-31151681 None:intergenic 20.0%
!!! TTTTCAATTTTGATGCATTA+TGG - chr7_1:31151900-31151919 Msa1016000:intron 20.0%
!! TGTTCTGTATTAATATATGT+CGG - chr7_1:31153022-31153041 Msa1016000:CDS 20.0%
!! TAAAAAGGATAAACTACAAA+TGG + chr7_1:31153058-31153077 None:intergenic 20.0%
!!! TTTGTTGGTCAATTAGTTTT+TGG - chr7_1:31141580-31141599 Msa1016000:three_prime_UTR 25.0%
!! TTTTGTATACACTCGTAATT+TGG - chr7_1:31141973-31141992 Msa1016000:intron 25.0%
! AATAAGAAAATGACGTGTTA+CGG - chr7_1:31142295-31142314 Msa1016000:intron 25.0%
! GTTTGATGGGATTAATTAAA+AGG - chr7_1:31142344-31142363 Msa1016000:intron 25.0%
! AGAGTAAATTTAATAGTGTG+AGG - chr7_1:31142707-31142726 Msa1016000:intron 25.0%
! CCCTAAAAAGACATTTAAAA+AGG + chr7_1:31142743-31142762 None:intergenic 25.0%
! ACATAAGAGTAATTGACAAA+TGG + chr7_1:31142812-31142831 None:intergenic 25.0%
! ACTTATCTATTAACTCTTCT+TGG + chr7_1:31142933-31142952 None:intergenic 25.0%
!!! AAAGACAATTGTTTGTTATG+AGG - chr7_1:31143039-31143058 Msa1016000:CDS 25.0%
!!! AAGACAATTGTTTGTTATGA+GGG - chr7_1:31143040-31143059 Msa1016000:CDS 25.0%
!! TAGTCTTTAGTTCATGTTAA+AGG - chr7_1:31143297-31143316 Msa1016000:intron 25.0%
!! AGTCTTTAGTTCATGTTAAA+GGG - chr7_1:31143298-31143317 Msa1016000:intron 25.0%
!!! TTTTTTTAAAGTGTCCCAAT+AGG - chr7_1:31143411-31143430 Msa1016000:intron 25.0%
! TAACATCATAGATTGCAATT+TGG + chr7_1:31143801-31143820 None:intergenic 25.0%
! ATAATTAAGCTAAATGGTCA+AGG + chr7_1:31143834-31143853 None:intergenic 25.0%
!! AAGCAATTTTAGATACTTTC+TGG + chr7_1:31143929-31143948 None:intergenic 25.0%
!! AAAGTATCTAAAATTGCTTG+TGG - chr7_1:31143930-31143949 Msa1016000:intron 25.0%
!! TTTTGATGCATTATGGTTTA+TGG - chr7_1:31144079-31144098 Msa1016000:intron 25.0%
!! TATCATTCAAGTTTCTATGA+CGG - chr7_1:31144153-31144172 Msa1016000:intron 25.0%
! ACCAATTATGTTGTGAAAAT+AGG - chr7_1:31144651-31144670 Msa1016000:intron 25.0%
! AATTATGTTGTGAAAATAGG+CGG - chr7_1:31144654-31144673 Msa1016000:intron 25.0%
!!! AAATTCCATCTTTGTTTTTC+AGG - chr7_1:31144859-31144878 Msa1016000:intron 25.0%
! ATAAGAAGGATAAACTACAA+TGG + chr7_1:31145232-31145251 None:intergenic 25.0%
! GAACTATATTTGAGAATTGA+GGG + chr7_1:31145289-31145308 None:intergenic 25.0%
! AGAACTATATTTGAGAATTG+AGG + chr7_1:31145290-31145309 None:intergenic 25.0%
! AATTTACTAAAACGAATGTG+TGG - chr7_1:31145430-31145449 Msa1016000:intron 25.0%
!!! AATGAAAATTGAGAGCATTT+TGG + chr7_1:31145669-31145688 None:intergenic 25.0%
! ATAGAAAAAGATGTTGTTCA+GGG + chr7_1:31145846-31145865 None:intergenic 25.0%
! AATAGAAAAAGATGTTGTTC+AGG + chr7_1:31145847-31145866 None:intergenic 25.0%
! CAATAAAAAGAGCAAAAAGA+CGG - chr7_1:31146068-31146087 Msa1016000:intron 25.0%
! AATAAAAAGAGCAAAAAGAC+GGG - chr7_1:31146069-31146088 Msa1016000:intron 25.0%
! TATTAATACTAGCGAAAAGA+CGG + chr7_1:31146106-31146125 None:intergenic 25.0%
! CGCTAGTATTAATAAAATCA+TGG - chr7_1:31146112-31146131 Msa1016000:intron 25.0%
! ATATTTCTTGTAAATAGGAC+TGG + chr7_1:31146186-31146205 None:intergenic 25.0%
! TTAGTAGTGTTTATATAGCA+GGG + chr7_1:31146465-31146484 None:intergenic 25.0%
! ATTAGTAGTGTTTATATAGC+AGG + chr7_1:31146466-31146485 None:intergenic 25.0%
!! TTGTATTAAACAAGTTGACT+CGG - chr7_1:31146743-31146762 Msa1016000:intron 25.0%
! TAATTATATGTCATAGTCGA+TGG + chr7_1:31146859-31146878 None:intergenic 25.0%
! GCATAAATGATTATAGCATT+TGG - chr7_1:31147026-31147045 Msa1016000:intron 25.0%
!! TGATAATTTTCGGATGTTAT+TGG + chr7_1:31147071-31147090 None:intergenic 25.0%
!!! TCAAGCATAGTTTTAAAAAC+CGG + chr7_1:31147391-31147410 None:intergenic 25.0%
!!! GAGTCAATATACTTTTTTCA+AGG + chr7_1:31147443-31147462 None:intergenic 25.0%
!! AGTTTTCGGATTTTATAATC+CGG - chr7_1:31147689-31147708 Msa1016000:intron 25.0%
! AATAAAAGAAAACACCATTC+CGG + chr7_1:31147711-31147730 None:intergenic 25.0%
! AATGGATGAAAAATTGAGTA+CGG - chr7_1:31147731-31147750 Msa1016000:intron 25.0%
! ATCCGGAAAATTCAAAAAAT+AGG - chr7_1:31147772-31147791 Msa1016000:intron 25.0%
! TCCGGAAAATTCAAAAAATA+GGG - chr7_1:31147773-31147792 Msa1016000:intron 25.0%
!! AACTGTTTTACCTTGAAAAA+TGG + chr7_1:31147848-31147867 None:intergenic 25.0%
!!! TTTTTCAAGGTAAAACAGTT+CGG - chr7_1:31147848-31147867 Msa1016000:intron 25.0%
!! GTAACATGGATATTCATTTT+AGG - chr7_1:31147915-31147934 Msa1016000:intron 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG + chr7_1:31148050-31148069 None:intergenic 25.0%
! GATTATACATAAGAATTGTC+CGG - chr7_1:31148346-31148365 Msa1016000:intron 25.0%
!! CTATTTCGGATTTTATAATC+CGG + chr7_1:31148368-31148387 None:intergenic 25.0%
!!! TGAATCCGGATTTTAAAATA+CGG - chr7_1:31148394-31148413 Msa1016000:intron 25.0%
!!! GGCATTTTTGAAAATTTTAC+AGG - chr7_1:31148427-31148446 Msa1016000:intron 25.0%
!!! TCCCAAATAATGAACTTTTT+TGG + chr7_1:31148548-31148567 None:intergenic 25.0%
!!! TTTGTTGGTCAATTAGTTTT+TGG - chr7_1:31141580-31141599 Msa1016000:three_prime_UTR 25.0%
! TCTAAAAGTGACACTTAAAA+AGG + chr7_1:31149034-31149053 None:intergenic 25.0%
! CTCTCCACAATAATAAATAA+GGG + chr7_1:31149130-31149149 None:intergenic 25.0%
! TCTCTCCACAATAATAAATA+AGG + chr7_1:31149131-31149150 None:intergenic 25.0%
! ATATTATATGAACTCGGATA+TGG - chr7_1:31149497-31149516 Msa1016000:CDS 25.0%
! AAAGACATTAAACTATCGTA+TGG - chr7_1:31149575-31149594 Msa1016000:intron 25.0%
! AATAAGAAAATGACGTGTTA+CGG - chr7_1:31142295-31142314 Msa1016000:intron 25.0%
! GTACAAAAGTTGTCATAAAA+TGG + chr7_1:31149728-31149747 None:intergenic 25.0%
! TCAATGTATCTAAAAAGTCA+TGG - chr7_1:31149981-31150000 Msa1016000:intron 25.0%
! AAAAGTCATGGAAATAAAAC+TGG - chr7_1:31149993-31150012 Msa1016000:intron 25.0%
!!! AAATTGTTTGTTATGAGAGA+AGG + chr7_1:31150719-31150738 None:intergenic 25.0%
!!! CCTTTTTAAGTGTCTTTTTA+GGG + chr7_1:31150401-31150420 None:intergenic 25.0%
!!! TCCTTTTTAAGTGTCTTTTT+AGG + chr7_1:31150402-31150421 None:intergenic 25.0%
! AAAAGACACTTAAAAAGGAA+CGG - chr7_1:31150403-31150422 Msa1016000:intron 25.0%
!!! TTTATTGGTGGATTAAAATG+AGG - chr7_1:31150862-31150881 Msa1016000:CDS 25.0%
!!! TTATTGGTGGATTAAAATGA+GGG - chr7_1:31150863-31150882 Msa1016000:CDS 25.0%
!! GATTAAAATGAGGGTATAAT+AGG - chr7_1:31150872-31150891 Msa1016000:CDS 25.0%
!!! TTTTTTTAAAGTGTCCCAAT+AGG - chr7_1:31143411-31143430 Msa1016000:intron 25.0%
! AAATCTTACATCTAAACACA+GGG + chr7_1:31151327-31151346 None:intergenic 25.0%
!!! AGATGTAAGATTTGTTGAAT+AGG - chr7_1:31151334-31151353 Msa1016000:intron 25.0%
! TAACATCATAGATTGCAATT+TGG + chr7_1:31143801-31143820 None:intergenic 25.0%
!! AAGCAATTTTAGATACTTTC+TGG + chr7_1:31143929-31143948 None:intergenic 25.0%
!! AAAGTATCTAAAATTGCTTG+TGG - chr7_1:31143930-31143949 Msa1016000:intron 25.0%
!! TTTTGATGCATTATGGTTTA+TGG - chr7_1:31144079-31144098 Msa1016000:intron 25.0%
!! TATCATTCAAGTTTCTATGA+CGG - chr7_1:31144153-31144172 Msa1016000:intron 25.0%
! TGATGATAAGCTATGAAATA+CGG + chr7_1:31152240-31152259 None:intergenic 25.0%
! ACCAATTATGTTGTGAAAAT+AGG - chr7_1:31144651-31144670 Msa1016000:intron 25.0%
! AATTATGTTGTGAAAATAGG+CGG - chr7_1:31144654-31144673 Msa1016000:intron 25.0%
!! TTTAAAATCACGTTTCTTCA+AGG + chr7_1:31144841-31144860 None:intergenic 25.0%
!!! AAATTCCATCTTTGTTTTTC+AGG - chr7_1:31144859-31144878 Msa1016000:intron 25.0%
!! GTGAACTTTTATGGAAATAT+AGG - chr7_1:31152712-31152731 Msa1016000:intron 25.0%
! GAACTATATTTGAGAATTGA+GGG + chr7_1:31145289-31145308 None:intergenic 25.0%
! AGAACTATATTTGAGAATTG+AGG + chr7_1:31145290-31145309 None:intergenic 25.0%
ATGTCTCTTATGAAGCTTTA+GGG - chr7_1:31141544-31141563 Msa1016000:three_prime_UTR 30.0%
!!! ATTGGTAAGGTATTGTTTTC+TGG + chr7_1:31141650-31141669 None:intergenic 30.0%
! GTTTTTGTGTTTGATTAGTG+TGG - chr7_1:31141716-31141735 Msa1016000:CDS 30.0%
AAAATTCACAAACCTCTTTC+TGG + chr7_1:31141860-31141879 None:intergenic 30.0%
! GCACAAACACTTGTTAAATT+AGG - chr7_1:31142009-31142028 Msa1016000:intron 30.0%
TTCTTGTAAATAGGATCTCA+GGG + chr7_1:31142407-31142426 None:intergenic 30.0%
TTTCTTGTAAATAGGATCTC+AGG + chr7_1:31142408-31142427 None:intergenic 30.0%
GTAAATTTAATAGTGTGAGG+AGG - chr7_1:31142710-31142729 Msa1016000:intron 30.0%
TCACAGTAACAAACAATTGT+CGG + chr7_1:31143115-31143134 None:intergenic 30.0%
!!! AGACTTTTTTGTTGTATCTG+AGG - chr7_1:31143274-31143293 Msa1016000:intron 30.0%
ATGACTTGAGGTCTTAAAAT+TGG + chr7_1:31143365-31143384 None:intergenic 30.0%
TCTCAATTCTCAAACAATGT+AGG - chr7_1:31143474-31143493 Msa1016000:intron 30.0%
! CAAACAATGTAGGACTTTTT+AGG - chr7_1:31143484-31143503 Msa1016000:intron 30.0%
GTTAAACATGTCATTAGCTA+TGG - chr7_1:31143603-31143622 Msa1016000:intron 30.0%
!! TCAATTTCTGAAATGCATGA+TGG + chr7_1:31143630-31143649 None:intergenic 30.0%
TTGCATTGCACAATCATAAT+TGG - chr7_1:31143997-31144016 Msa1016000:intron 30.0%
TTAAAATCGATACTAACCTG+AGG + chr7_1:31144193-31144212 None:intergenic 30.0%
TGATGATAAGCTACGAAATA+CGG + chr7_1:31144418-31144437 None:intergenic 30.0%
GCTAACTTCAGAACAAAAAA+TGG + chr7_1:31144620-31144639 None:intergenic 30.0%
ACATAATTGGTTAAGATGGA+TGG + chr7_1:31144642-31144661 None:intergenic 30.0%
CACAACATAATTGGTTAAGA+TGG + chr7_1:31144646-31144665 None:intergenic 30.0%
! GCCTATTTTCACAACATAAT+TGG + chr7_1:31144655-31144674 None:intergenic 30.0%
!! TTCATGAGAAAAAGTACTGA+TGG - chr7_1:31144685-31144704 Msa1016000:intron 30.0%
ATATTAGTGACCTTGATCAA+TGG + chr7_1:31144782-31144801 None:intergenic 30.0%
AAGAACCTGAAAAACAAAGA+TGG + chr7_1:31144867-31144886 None:intergenic 30.0%
!!! ATCTTTGTTTTTCAGGTTCT+TGG - chr7_1:31144866-31144885 Msa1016000:intron 30.0%
!!! TCTTTGTTTTTCAGGTTCTT+GGG - chr7_1:31144867-31144886 Msa1016000:intron 30.0%
TGAACTTCTATGGAAACATA+GGG - chr7_1:31144890-31144909 Msa1016000:intron 30.0%
ATCACATTCTTTAACATTGC+AGG - chr7_1:31145027-31145046 Msa1016000:intron 30.0%
CAGGATATAACACATAATGT+TGG + chr7_1:31145084-31145103 None:intergenic 30.0%
!! TCTAATTTGCGTTTTCTTTC+AGG + chr7_1:31145103-31145122 None:intergenic 30.0%
AAATGCAGAAATTGAGTGAT+TGG + chr7_1:31145338-31145357 None:intergenic 30.0%
ACTCAATTTCTGCATTTCAT+TGG - chr7_1:31145341-31145360 Msa1016000:intron 30.0%
ACTGTTGGATTAAGATCAAA+CGG - chr7_1:31145377-31145396 Msa1016000:intron 30.0%
GATGAATTAAACTAAAAGGG+AGG + chr7_1:31145506-31145525 None:intergenic 30.0%
ATGTTGTTCAGGGTATAATT+GGG + chr7_1:31145836-31145855 None:intergenic 30.0%
!! TTTGTTGGTGTCATTGAAAT+AGG - chr7_1:31145927-31145946 Msa1016000:CDS 30.0%
ATAGGTAATCGTTGTTAGTT+TGG - chr7_1:31145945-31145964 Msa1016000:intron 30.0%
ATTAATACTAGCGAAAAGAC+GGG + chr7_1:31146105-31146124 None:intergenic 30.0%
TAGTAGTGTTTATATAGCAG+GGG + chr7_1:31146464-31146483 None:intergenic 30.0%
TTCAAATAAATGCTTTGACC+CGG - chr7_1:31147213-31147232 Msa1016000:intron 30.0%
GTTCATTTAACTAGATGGAT+CGG + chr7_1:31147318-31147337 None:intergenic 30.0%
ATCCATCTAGTTAAATGAAC+CGG - chr7_1:31147318-31147337 Msa1016000:intron 30.0%
TCACTCATTAATATGGAGAT+TGG + chr7_1:31147480-31147499 None:intergenic 30.0%
! AAAAGTAAATGCCTTTTTCC+GGG + chr7_1:31147618-31147637 None:intergenic 30.0%
! GAAAAGTAAATGCCTTTTTC+CGG + chr7_1:31147619-31147638 None:intergenic 30.0%
!!! GCCCTATTTTTTGAATTTTC+CGG + chr7_1:31147777-31147796 None:intergenic 30.0%
! TTTTTCTGGATTACCTAATC+CGG - chr7_1:31147808-31147827 Msa1016000:intron 30.0%
ACCTTGAAAAATGGTGTTTA+GGG + chr7_1:31147839-31147858 None:intergenic 30.0%
TACCTTGAAAAATGGTGTTT+AGG + chr7_1:31147840-31147859 None:intergenic 30.0%
GAATTTATGCTGATACAGTT+CGG + chr7_1:31147884-31147903 None:intergenic 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG - chr7_1:31147988-31148007 Msa1016000:intron 30.0%
! TTAGTCAAAAATCGGGTTTT+CGG - chr7_1:31147996-31148015 Msa1016000:intron 30.0%
! ATGGAATTTTGGATTTTGAG+TGG + chr7_1:31148116-31148135 None:intergenic 30.0%
TAAAAAATGGGTCTAAACGA+TGG + chr7_1:31148135-31148154 None:intergenic 30.0%
CGGATTCATGATTACTATTT+CGG + chr7_1:31148382-31148401 None:intergenic 30.0%
CGAAATAGTAATCATGAATC+CGG - chr7_1:31148380-31148399 Msa1016000:intron 30.0%
!!! GAATCCGGATTTTAAAATAC+GGG - chr7_1:31148395-31148414 Msa1016000:intron 30.0%
!! TTTGTTTCTTTTTCCACCTA+TGG + chr7_1:31148466-31148485 None:intergenic 30.0%
ATGTCTCTTATGAAGCTTTA+GGG - chr7_1:31141544-31141563 Msa1016000:three_prime_UTR 30.0%
!!! AATGGTAAGGTATTGTTTTC+TGG + chr7_1:31148730-31148749 None:intergenic 30.0%
! GTTTTTGTGTTTGATTAGTG+TGG - chr7_1:31141716-31141735 Msa1016000:CDS 30.0%
AAAATTCACAAACCTCTTTC+TGG + chr7_1:31141860-31141879 None:intergenic 30.0%
TGACAATTAAAAAGGAACTG+AGG - chr7_1:31149267-31149286 Msa1016000:intron 30.0%
! TTTTGTATACACTCGCAATT+TGG - chr7_1:31149325-31149344 Msa1016000:intron 30.0%
! GCACAAACACTTGTTAAATT+AGG - chr7_1:31142009-31142028 Msa1016000:intron 30.0%
ATTATCTATCGTATTGTGTC+CGG - chr7_1:31149437-31149456 Msa1016000:intron 30.0%
! AGGAAGGAAGCATAATAAAT+AGG - chr7_1:31149661-31149680 Msa1016000:intron 30.0%
CTCTTAAAATACCAAAACGA+CGG - chr7_1:31150353-31150372 Msa1016000:intron 30.0%
CCCTAAAAAGACACTTAAAA+AGG - chr7_1:31150398-31150417 Msa1016000:intron 30.0%
AGCGTAAATTTAATAGTGTG+AGG - chr7_1:31150545-31150564 Msa1016000:intron 30.0%
AAGTTCATGTTAAAGCCTAA+AGG - chr7_1:31150954-31150973 Msa1016000:intron 30.0%
AGTTCATGTTAAAGCCTAAA+GGG - chr7_1:31150955-31150974 Msa1016000:intron 30.0%
ATGACTTGAGGTCTAAAAAT+TGG + chr7_1:31151022-31151041 None:intergenic 30.0%
! AGGTCTTTTAATATGACTTG+AGG + chr7_1:31151034-31151053 None:intergenic 30.0%
ATCTCAATTCTCAAACAATG+TGG - chr7_1:31143473-31143492 Msa1016000:intron 30.0%
TCTCAATTCTCAAACAATGT+GGG - chr7_1:31143474-31143493 Msa1016000:intron 30.0%
!!! CAAACAATGTGGGATTTTTT+AGG - chr7_1:31151142-31151161 Msa1016000:intron 30.0%
GTGACTACAAATAAACTAGA+AGG - chr7_1:31151269-31151288 Msa1016000:intron 30.0%
CAAATCTTACATCTAAACAC+AGG + chr7_1:31151328-31151347 None:intergenic 30.0%
GTTAAACATGTCATTAGCTA+TGG - chr7_1:31143603-31143622 Msa1016000:intron 30.0%
TTAAAATCGATACTAACCTG+AGG + chr7_1:31144193-31144212 None:intergenic 30.0%
! CATTGAGTTTTGCAGAATTA+CGG - chr7_1:31144477-31144496 Msa1016000:intron 30.0%
TAATGAGTTCGACAAAATCA+TGG + chr7_1:31152383-31152402 None:intergenic 30.0%
GCTAACTTCAGAACAAAAAA+TGG + chr7_1:31144620-31144639 None:intergenic 30.0%
ACATAATTGGTTAAGATGGA+TGG + chr7_1:31144642-31144661 None:intergenic 30.0%
CACAACATAATTGGTTAAGA+TGG + chr7_1:31144646-31144665 None:intergenic 30.0%
! GCCTATTTTCACAACATAAT+TGG + chr7_1:31144655-31144674 None:intergenic 30.0%
!! TTCATGAGAAAAAGTACTGA+TGG - chr7_1:31144685-31144704 Msa1016000:intron 30.0%
ATATTAGTGACCTTGATCAA+TGG + chr7_1:31144782-31144801 None:intergenic 30.0%
AAGAACCTGAAAAACAAAGA+TGG + chr7_1:31144867-31144886 None:intergenic 30.0%
!!! ATCTTTGTTTTTCAGGTTCT+TGG - chr7_1:31144866-31144885 Msa1016000:intron 30.0%
!!! TCTTTGTTTTTCAGGTTCTT+GGG - chr7_1:31144867-31144886 Msa1016000:intron 30.0%
! TCACATTCTTTTAACATTGC+AGG - chr7_1:31152853-31152872 Msa1016000:CDS 30.0%
CAGGATATAACACATAATGT+TGG + chr7_1:31145084-31145103 None:intergenic 30.0%
!! TCTAATTTGCGTTTTCTTTC+AGG + chr7_1:31145103-31145122 None:intergenic 30.0%
AGAAATCGATCATGTCTTCT+TGG - chr7_1:31141505-31141524 Msa1016000:three_prime_UTR 35.0%
CATGTCTCTTATGAAGCTTT+AGG - chr7_1:31141543-31141562 Msa1016000:three_prime_UTR 35.0%
! CGAAAGTTTAAGATCACTTG+AGG + chr7_1:31141606-31141625 None:intergenic 35.0%
AAGTGATCTTAAACTTTCGC+AGG - chr7_1:31141607-31141626 Msa1016000:exon 35.0%
TCTTAAACTTTCGCAGGAAA+AGG - chr7_1:31141613-31141632 Msa1016000:exon 35.0%
TTGTGTTTGATTAGTGTGGT+TGG - chr7_1:31141720-31141739 Msa1016000:CDS 35.0%
TATATGAATGAACTCGGATC+TGG - chr7_1:31142168-31142187 Msa1016000:intron 35.0%
! GACTTTTGTGAAAGTGGAAA+TGG + chr7_1:31142260-31142279 None:intergenic 35.0%
GTAATAAGTAGGCGTTTGAT+GGG - chr7_1:31142331-31142350 Msa1016000:intron 35.0%
TAAATAGGATCTCAGGGATA+AGG + chr7_1:31142401-31142420 None:intergenic 35.0%
AGCGCACGCAAAAAAAAAAA+GGG - chr7_1:31143063-31143082 Msa1016000:intron 35.0%
! GACAATTGTTTGTTACTGTG+AGG - chr7_1:31143114-31143133 Msa1016000:intron 35.0%
AGTTCATGTTAAAGGGCTAA+AGG - chr7_1:31143305-31143324 Msa1016000:intron 35.0%
AGGTCTTTGAATATGACTTG+AGG + chr7_1:31143377-31143396 None:intergenic 35.0%
!!! TCGATTATTTTTATGCAGCG+TGG - chr7_1:31143900-31143919 Msa1016000:intron 35.0%
TGCACAATCATAATTGGCTA+TGG - chr7_1:31144003-31144022 Msa1016000:intron 35.0%
!!! GGTTTATGGAAGCTTTGTTT+TGG - chr7_1:31144093-31144112 Msa1016000:intron 35.0%
GGTCGTAAAATATATTCCTC+AGG - chr7_1:31144174-31144193 Msa1016000:intron 35.0%
ATCCAACAATGATACATGTC+AGG + chr7_1:31144286-31144305 None:intergenic 35.0%
TAATGAGTTCGACAAAATCG+TGG + chr7_1:31144560-31144579 None:intergenic 35.0%
!! TGAGAAAAAGTACTGATGGA+TGG - chr7_1:31144689-31144708 Msa1016000:intron 35.0%
! AACATTCTACTGGACTTTTC+TGG - chr7_1:31144721-31144740 Msa1016000:intron 35.0%
GTGAACTTCTATGGAAACAT+AGG - chr7_1:31144889-31144908 Msa1016000:intron 35.0%
TGATACACTGTTACATACCA+AGG + chr7_1:31144929-31144948 None:intergenic 35.0%
CATAATGTTGGATGATGAAG+AGG + chr7_1:31145072-31145091 None:intergenic 35.0%
GACTTGACATTATCAAAGTC+AGG + chr7_1:31145133-31145152 None:intergenic 35.0%
GGTCAACAAATCAAAACTGT+TGG - chr7_1:31145362-31145381 Msa1016000:intron 35.0%
AATGAAGAGATTGTCGGATA+GGG + chr7_1:31145464-31145483 None:intergenic 35.0%
ATTAAACTAAAAGGGAGGAG+AGG + chr7_1:31145501-31145520 None:intergenic 35.0%
CCAACAATTATGTAAGCCTA+TGG + chr7_1:31145528-31145547 None:intergenic 35.0%
CCATAGGCTTACATAATTGT+TGG - chr7_1:31145525-31145544 Msa1016000:intron 35.0%
!!! ACCACCTCTTTCATCTTTTT+TGG - chr7_1:31145627-31145646 Msa1016000:intron 35.0%
!!! CCACCTCTTTCATCTTTTTT+GGG - chr7_1:31145628-31145647 Msa1016000:intron 35.0%
CAACCCAAAAAAGATGAAAG+AGG + chr7_1:31145634-31145653 None:intergenic 35.0%
GATGTTGTTCAGGGTATAAT+TGG + chr7_1:31145837-31145856 None:intergenic 35.0%
! GACTGGATGGAGTATTAAAT+TGG + chr7_1:31146169-31146188 None:intergenic 35.0%
TTCTTGTAAATAGGACTGGA+TGG + chr7_1:31146182-31146201 None:intergenic 35.0%
!!! CATAGTTTTAAAAACCGGAC+CGG - chr7_1:31146596-31146615 Msa1016000:intron 35.0%
! CGCTTGGTTGTGATAATTTT+CGG + chr7_1:31147081-31147100 None:intergenic 35.0%
TGGAGACATGCATATATCAT+GGG + chr7_1:31147127-31147146 None:intergenic 35.0%
! CGGTAAAATCGGTTTAAAAC+CGG + chr7_1:31147255-31147274 None:intergenic 35.0%
CCATGCTATTGATATTGAAC+CGG + chr7_1:31147295-31147314 None:intergenic 35.0%
! AACCGGTTCATTTAACTAGA+TGG + chr7_1:31147323-31147342 None:intergenic 35.0%
!!! CATAGTTTTAAAAACCGGAC+CGG + chr7_1:31146596-31146615 None:intergenic 35.0%
! TACTCCTTTTCTCACAAATC+CGG - chr7_1:31147559-31147578 Msa1016000:intron 35.0%
ATGAGGAATTGTATGTGAAC+CGG + chr7_1:31147581-31147600 None:intergenic 35.0%
! AAAGTAAATGCCTTTTTCCG+GGG + chr7_1:31147617-31147636 None:intergenic 35.0%
!! ATTTACTTTTCCCACCATGT+GGG - chr7_1:31147628-31147647 Msa1016000:intron 35.0%
! TCGGATTTTATAATCCGGAA+TGG - chr7_1:31147694-31147713 Msa1016000:intron 35.0%
CTTGAAAAATGGTGTTTAGG+GGG + chr7_1:31147837-31147856 None:intergenic 35.0%
CCTTGAAAAATGGTGTTTAG+GGG + chr7_1:31147838-31147857 None:intergenic 35.0%
AAAACAGAAGGATGAGACTT+AGG + chr7_1:31147956-31147975 None:intergenic 35.0%
! AAGTCTCATCCTTCTGTTTT+TGG - chr7_1:31147956-31147975 Msa1016000:intron 35.0%
!! AGTCTCATCCTTCTGTTTTT+GGG - chr7_1:31147957-31147976 Msa1016000:intron 35.0%
AACAATGACCCAAAAACAGA+AGG + chr7_1:31147968-31147987 None:intergenic 35.0%
CCTGTTCTTAGTCAAAAATC+GGG - chr7_1:31147989-31148008 Msa1016000:intron 35.0%
! TAGTCAAAAATCGGGTTTTC+GGG - chr7_1:31147997-31148016 Msa1016000:intron 35.0%
!! GAATTTTGGATTTTGAGTGG+CGG + chr7_1:31148113-31148132 None:intergenic 35.0%
!!! GCATCCCGTATTTTAAAATC+CGG + chr7_1:31148402-31148421 None:intergenic 35.0%
! TTTGAAAATTTTACAGGGCG+CGG - chr7_1:31148433-31148452 Msa1016000:intron 35.0%
AGAAATCGATCATGTGTTCT+TGG - chr7_1:31148585-31148604 Msa1016000:intron 35.0%
CATGTCTCTTATGAAGCTTT+AGG - chr7_1:31141543-31141562 Msa1016000:three_prime_UTR 35.0%
! CGAAAGTTTAAGATCACTTG+AGG + chr7_1:31141606-31141625 None:intergenic 35.0%
AAGTGATCTTAAACTTTCGC+AGG - chr7_1:31141607-31141626 Msa1016000:exon 35.0%
TCTTAAACTTTCGCAGGAAA+AGG - chr7_1:31141613-31141632 Msa1016000:exon 35.0%
TTGTGTTTGATTAGTGTGGT+TGG - chr7_1:31141720-31141739 Msa1016000:CDS 35.0%
GACACTTAAAAAGGAACTGA+GGG + chr7_1:31149025-31149044 None:intergenic 35.0%
TGACACTTAAAAAGGAACTG+AGG + chr7_1:31149026-31149045 None:intergenic 35.0%
AACGAAGGGAGTAATTACTA+AGG + chr7_1:31150038-31150057 None:intergenic 35.0%
AGATAGAGTGTGTGCAAAAA+AGG + chr7_1:31150061-31150080 None:intergenic 35.0%
AGCGCGCAAAAAAAAAAAAC+AGG + chr7_1:31150145-31150164 None:intergenic 35.0%
TACCAAAACGACGGTTAAAT+AGG - chr7_1:31150362-31150381 Msa1016000:intron 35.0%
! TTCCTATTTAACCGTCGTTT+TGG + chr7_1:31150367-31150386 None:intergenic 35.0%
!! TCAATTTCTGAAATGCACGA+TGG + chr7_1:31151402-31151421 None:intergenic 35.0%
!!! TTTTTTGCAGATGATACCAG+TGG - chr7_1:31151545-31151564 Msa1016000:intron 35.0%
!!! TCGATTATTTTTATGCAGCG+TGG - chr7_1:31143900-31143919 Msa1016000:intron 35.0%
TTGCATTGCACAATCATCAT+TGG - chr7_1:31151825-31151844 Msa1016000:intron 35.0%
!!! GGTTTATGGAAGCTTTGTTT+TGG - chr7_1:31144093-31144112 Msa1016000:intron 35.0%
GGTCGTAAAATATATTCCTC+AGG - chr7_1:31144174-31144193 Msa1016000:intron 35.0%
ATCCAACAATGATACATGTC+AGG + chr7_1:31144286-31144305 None:intergenic 35.0%
!! TGAGAAAAAGTACTGATGGA+TGG - chr7_1:31144689-31144708 Msa1016000:intron 35.0%
! AACATTCTACTGGACTTTTC+TGG - chr7_1:31144721-31144740 Msa1016000:intron 35.0%
AGGAAAACTATTGCTATCCT+TGG - chr7_1:31152732-31152751 Msa1016000:intron 35.0%
TGATACACTGTTACATACCA+AGG + chr7_1:31144929-31144948 None:intergenic 35.0%
CATAATGTTGGATGATGAAG+AGG + chr7_1:31145072-31145091 None:intergenic 35.0%
GCTTCATAAGAGACATGAAG+TGG + chr7_1:31141540-31141559 None:intergenic 40.0%
!! TCTCTTATGAAGCTTTAGGG+TGG - chr7_1:31141547-31141566 Msa1016000:three_prime_UTR 40.0%
!!! GGTGGTTTGCTTTTGTTTGT+TGG - chr7_1:31141565-31141584 Msa1016000:three_prime_UTR 40.0%
AGATAAATACGGCCAGAAAG+AGG - chr7_1:31141845-31141864 Msa1016000:intron 40.0%
TAATTACAAGTGCCCGACAT+CGG + chr7_1:31142041-31142060 None:intergenic 40.0%
TGCTATGTGAAGCACATGTA+CGG + chr7_1:31142139-31142158 None:intergenic 40.0%
GTGCTTATCGAAAAGATGTG+CGG - chr7_1:31142194-31142213 Msa1016000:intron 40.0%
!!! CTCGTTGACTTTTGTGAAAG+TGG + chr7_1:31142266-31142285 None:intergenic 40.0%
GAAAATGACGTGTTACGGTT+AGG - chr7_1:31142300-31142319 Msa1016000:intron 40.0%
! AGGAAGGAAGCGTAATAAGT+AGG - chr7_1:31142320-31142339 Msa1016000:intron 40.0%
CGTAATAAGTAGGCGTTTGA+TGG - chr7_1:31142330-31142349 Msa1016000:intron 40.0%
GAGCGCACGCAAAAAAAAAA+AGG - chr7_1:31143062-31143081 Msa1016000:intron 40.0%
TTGCACTTTCTCGACCTATT+GGG + chr7_1:31143428-31143447 None:intergenic 40.0%
! TCTTTTGCAGATGATACCAG+TGG - chr7_1:31143717-31143736 Msa1016000:intron 40.0%
TGCCTGACATGTATCATTGT+TGG - chr7_1:31144281-31144300 Msa1016000:intron 40.0%
! GAGCATTTGGAACATTCTAC+TGG - chr7_1:31144711-31144730 Msa1016000:intron 40.0%
! ATTCTACTGGACTTTTCTGG+AGG - chr7_1:31144724-31144743 Msa1016000:intron 40.0%
! TTCTACTGGACTTTTCTGGA+GGG - chr7_1:31144725-31144744 Msa1016000:intron 40.0%
GGTAGCAAACTATGCACAAA+TGG - chr7_1:31144747-31144766 Msa1016000:intron 40.0%
GCTATGCAATCCATTGATCA+AGG - chr7_1:31144769-31144788 Msa1016000:intron 40.0%
AGGGAAACTATTGCTATCCT+TGG - chr7_1:31144909-31144928 Msa1016000:intron 40.0%
CAAGTCTTCTGATCAGACAT+TGG - chr7_1:31145147-31145166 Msa1016000:intron 40.0%
CAATGAAGAGATTGTCGGAT+AGG + chr7_1:31145465-31145484 None:intergenic 40.0%
GAGAGCAATGAAGAGATTGT+CGG + chr7_1:31145470-31145489 None:intergenic 40.0%
CCCAAAAAAGATGAAAGAGG+TGG + chr7_1:31145631-31145650 None:intergenic 40.0%
AAAAAGTGGAAGTCGCACAT+CGG + chr7_1:31146502-31146521 None:intergenic 40.0%
AGTCATCCGATTCTTTCATG+CGG + chr7_1:31146687-31146706 None:intergenic 40.0%
CATGAAAGAATCGGATGACT+CGG - chr7_1:31146687-31146706 Msa1016000:intron 40.0%
TATATGGAGACCGAGTGAAA+TGG + chr7_1:31146713-31146732 None:intergenic 40.0%
GGAGACATGCATATATCATG+GGG + chr7_1:31147126-31147145 None:intergenic 40.0%
GTGGAGACATGCATATATCA+TGG + chr7_1:31147128-31147147 None:intergenic 40.0%
CCGGTTCAATATCAATAGCA+TGG - chr7_1:31147292-31147311 Msa1016000:intron 40.0%
TCAGGCGTCACTCATTAATA+TGG + chr7_1:31147487-31147506 None:intergenic 40.0%
TGAACCGGATTTGTGAGAAA+AGG + chr7_1:31147566-31147585 None:intergenic 40.0%
! AAGTAAATGCCTTTTTCCGG+GGG + chr7_1:31147616-31147635 None:intergenic 40.0%
!! CATTTACTTTTCCCACCATG+TGG - chr7_1:31147627-31147646 Msa1016000:intron 40.0%
TAGAAAAAATAGGGCGTGAG+AGG + chr7_1:31147657-31147676 None:intergenic 40.0%
!! CCCCTAAACACCATTTTTCA+AGG - chr7_1:31147835-31147854 Msa1016000:intron 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG + chr7_1:31147992-31148011 None:intergenic 40.0%
! CCTGTAGAAGGGACTTTTTA+CGG - chr7_1:31148083-31148102 Msa1016000:intron 40.0%
! GGGTCTAAACGATGGAATTT+TGG + chr7_1:31148127-31148146 None:intergenic 40.0%
! TTTAAAATACGGGATGCGCA+AGG - chr7_1:31148405-31148424 Msa1016000:intron 40.0%
TTAAAATACGGGATGCGCAA+GGG - chr7_1:31148406-31148425 Msa1016000:intron 40.0%
! TTGAAAATTTTACAGGGCGC+GGG - chr7_1:31148434-31148453 Msa1016000:intron 40.0%
GCTTCATAAGAGACATGAAG+TGG + chr7_1:31141540-31141559 None:intergenic 40.0%
!! TCTCTTATGAAGCTTTAGGG+TGG - chr7_1:31141547-31141566 Msa1016000:three_prime_UTR 40.0%
!!! GGTGGTTTGCTTTTGTTTGT+TGG - chr7_1:31141565-31141584 Msa1016000:three_prime_UTR 40.0%
AGATAAATACGGCCAGAAAG+AGG - chr7_1:31141845-31141864 Msa1016000:intron 40.0%
TAATTACAAGTGCCCGACAT+CGG + chr7_1:31142041-31142060 None:intergenic 40.0%
TGCTATGTGAAGCACATGTA+CGG + chr7_1:31142139-31142158 None:intergenic 40.0%
GTGCTTATCGAAAAGATGTG+CGG - chr7_1:31142194-31142213 Msa1016000:intron 40.0%
GAAAATGACGTGTTACGGTT+AGG - chr7_1:31142300-31142319 Msa1016000:intron 40.0%
GTGTGCAAAAAAGGAACGAA+GGG + chr7_1:31150052-31150071 None:intergenic 40.0%
TGTGTGCAAAAAAGGAACGA+AGG + chr7_1:31150053-31150072 None:intergenic 40.0%
AGACACTTAAAAAGGAACGG+AGG - chr7_1:31150406-31150425 Msa1016000:intron 40.0%
AAAAAGGAACGGAGGAAGAA+CGG - chr7_1:31150414-31150433 Msa1016000:intron 40.0%
GTTAAAGCCTAAAGGGCTAA+AGG - chr7_1:31150962-31150981 Msa1016000:intron 40.0%
ACAAGTTCCTTTAGCCCTTT+AGG + chr7_1:31143315-31143334 None:intergenic 40.0%
TTGCACTTTCTCGACCTATT+GGG + chr7_1:31143428-31143447 None:intergenic 40.0%
TCTTACATCTAAACACAGGG+AGG + chr7_1:31151324-31151343 None:intergenic 40.0%
TGCCTGACATGTATCATTGT+TGG - chr7_1:31144281-31144300 Msa1016000:intron 40.0%
TGAGTTCGACAAAATCATGG+TGG + chr7_1:31152380-31152399 None:intergenic 40.0%
! GAGCATTTGGAACATTCTAC+TGG - chr7_1:31144711-31144730 Msa1016000:intron 40.0%
! ATTCTACTGGACTTTTCTGG+AGG - chr7_1:31144724-31144743 Msa1016000:intron 40.0%
! TTCTACTGGACTTTTCTGGA+GGG - chr7_1:31144725-31144744 Msa1016000:intron 40.0%
GGTAGCAAACTATGCACAAA+TGG - chr7_1:31144747-31144766 Msa1016000:intron 40.0%
GCTATGCAATCCATTGATCA+AGG - chr7_1:31144769-31144788 Msa1016000:intron 40.0%
! GGTTCTTGGGTGAACTTTTA+TGG - chr7_1:31152703-31152722 Msa1016000:intron 40.0%
GACTTGGCATTATCAAAGTC+AGG + chr7_1:31152959-31152978 None:intergenic 40.0%
AATTAGGCGTGTTCCGATGT+CGG - chr7_1:31142025-31142044 Msa1016000:CDS 45.0%
ATCAGTGTTCGTATCGTGTC+CGG - chr7_1:31142104-31142123 Msa1016000:CDS 45.0%
ATGACGTGTTACGGTTAGGA+AGG - chr7_1:31142304-31142323 Msa1016000:intron 45.0%
AAAGGAACTTGTGTGTGGCT+TGG - chr7_1:31143323-31143342 Msa1016000:intron 45.0%
CTTGCACTTTCTCGACCTAT+TGG + chr7_1:31143429-31143448 None:intergenic 45.0%
CTGCTGTTAGTAGTACTGCA+TGG + chr7_1:31143768-31143787 None:intergenic 45.0%
GTGGAATAGTCACTGTTGCA+TGG - chr7_1:31143949-31143968 Msa1016000:intron 45.0%
TGAGTTCGACAAAATCGTGG+TGG + chr7_1:31144557-31144576 None:intergenic 45.0%
! GTACTGATGGATGGAGCATT+TGG - chr7_1:31144698-31144717 Msa1016000:intron 45.0%
!! TCTACTGGACTTTTCTGGAG+GGG - chr7_1:31144726-31144745 Msa1016000:intron 45.0%
GGTTCTTGGGTGAACTTCTA+TGG - chr7_1:31144880-31144899 Msa1016000:intron 45.0%
! AGCAGGGGTGTACATCTAAA+GGG + chr7_1:31146449-31146468 None:intergenic 45.0%
! TAGCAGGGGTGTACATCTAA+AGG + chr7_1:31146450-31146469 None:intergenic 45.0%
GTCGAACCGCATGAAAGAAT+CGG - chr7_1:31146678-31146697 Msa1016000:intron 45.0%
GATATTGAACCGGTGAGAAC+CGG + chr7_1:31147285-31147304 None:intergenic 45.0%
AAATGAACCGGTTACCCTTC+CGG - chr7_1:31147330-31147349 Msa1016000:intron 45.0%
!! TTTTAAAAACCGGACCGGAC+CGG + chr7_1:31147381-31147400 None:intergenic 45.0%
! AGTAAATGCCTTTTTCCGGG+GGG + chr7_1:31147615-31147634 None:intergenic 45.0%
! GGCGCGTTACATGATTTTTC+TGG - chr7_1:31147794-31147813 Msa1016000:intron 45.0%
AATGGTGTTTAGGGGGTTTC+CGG + chr7_1:31147830-31147849 None:intergenic 45.0%
CCGTAAAAAGTCCCTTCTAC+AGG + chr7_1:31148086-31148105 None:intergenic 45.0%
AATTACAAGTGCCCGACATC+GGG + chr7_1:31142040-31142059 None:intergenic 45.0%
ACATGTACGGATACGGATAC+CGG + chr7_1:31149459-31149478 None:intergenic 45.0%
GTGAAGCACATGTACGGATA+CGG + chr7_1:31149466-31149485 None:intergenic 45.0%
ATGACGTGTTACGGTTAGGA+AGG - chr7_1:31142304-31142323 Msa1016000:intron 45.0%
AAAGGAACTTGTGTGTGGCT+TGG - chr7_1:31143323-31143342 Msa1016000:intron 45.0%
CTTGCACTTTCTCGACCTAT+TGG + chr7_1:31143429-31143448 None:intergenic 45.0%
CTGCTGTTAGTAGTACTGCA+TGG + chr7_1:31143768-31143787 None:intergenic 45.0%
GTGGAATAGTCACTGTTGCA+TGG - chr7_1:31143949-31143968 Msa1016000:intron 45.0%
!! TGCACAATCATCATTGGCTC+TGG - chr7_1:31151831-31151850 Msa1016000:intron 45.0%
! GTACTGATGGATGGAGCATT+TGG - chr7_1:31144698-31144717 Msa1016000:intron 45.0%
!! TCTACTGGACTTTTCTGGAG+GGG - chr7_1:31144726-31144745 Msa1016000:intron 45.0%
CAATGTCTGAGCAGAAGACT+TGG + chr7_1:31152975-31152994 None:intergenic 45.0%
CAAGTCTTCTGCTCAGACAT+TGG - chr7_1:31152973-31152992 Msa1016000:intron 45.0%
!! TAATAATATCATAAAAAAAT+TGG + chr7_1:31141668-31141687 None:intergenic 5.0%
!! AAAATAAAATATAATTACTA+AGG + chr7_1:31142570-31142589 None:intergenic 5.0%
!! AAAAATAACATTAAATTTAT+TGG - chr7_1:31143137-31143156 Msa1016000:intron 5.0%
!! ATACATATATATATATTATT+TGG + chr7_1:31146327-31146346 None:intergenic 5.0%
!! AAAAAATAACATTAAATTTA+TGG - chr7_1:31150809-31150828 Msa1016000:intron 5.0%
ATTAGGCGTGTTCCGATGTC+GGG - chr7_1:31142026-31142045 Msa1016000:CDS 50.0%
GTGAAGCACATGTACGGACA+GGG + chr7_1:31142133-31142152 None:intergenic 50.0%
TGTGAAGCACATGTACGGAC+AGG + chr7_1:31142134-31142153 None:intergenic 50.0%
GGGCTAAAGGAACTTGTGTG+TGG - chr7_1:31143318-31143337 Msa1016000:intron 50.0%
! GCAACATCATTTGCTGCCAC+TGG + chr7_1:31143736-31143755 None:intergenic 50.0%
! GCAGGGGTGTACATCTAAAG+GGG + chr7_1:31146448-31146467 None:intergenic 50.0%
TGGTCGAACCACTGAGTCAT+TGG - chr7_1:31146656-31146675 Msa1016000:intron 50.0%
! GATGACTCGGCCATTTCACT+CGG - chr7_1:31146700-31146719 Msa1016000:intron 50.0%
CAACCAAGCGTATGCTGCAA+TGG - chr7_1:31147091-31147110 Msa1016000:intron 50.0%
TCACCATTGCAGCATACGCT+TGG + chr7_1:31147097-31147116 None:intergenic 50.0%
! TAAATGCCTTTTTCCGGGGG+GGG + chr7_1:31147613-31147632 None:intergenic 50.0%
! GTAAATGCCTTTTTCCGGGG+GGG + chr7_1:31147614-31147633 None:intergenic 50.0%
TGAGAGGAAACCCACATGGT+GGG + chr7_1:31147641-31147660 None:intergenic 50.0%
GTTTAGGGGGTTTCCGGATT+AGG + chr7_1:31147824-31147843 None:intergenic 50.0%
AGGACCATGACTCCTGTAGA+AGG - chr7_1:31148071-31148090 Msa1016000:intron 50.0%
GGACCATGACTCCTGTAGAA+GGG - chr7_1:31148072-31148091 Msa1016000:intron 50.0%
AGTCCCTTCTACAGGAGTCA+TGG + chr7_1:31148078-31148097 None:intergenic 50.0%
AATTAGGCGTGTCCCGATGT+CGG - chr7_1:31149377-31149396 Msa1016000:intron 50.0%
GGGCTAAAGGAACTTGTGTG+TGG - chr7_1:31143318-31143337 Msa1016000:intron 50.0%
! GCAACATCATTTGCTGCCAC+TGG + chr7_1:31143736-31143755 None:intergenic 50.0%
ACATGTACGGACAGGGACAC+CGG + chr7_1:31142126-31142145 None:intergenic 55.0%
! AAAGGGAGGAGAGGTGCAGA+TGG + chr7_1:31145492-31145511 None:intergenic 55.0%
AGTGGAAGTCGCACATCGGA+TGG + chr7_1:31146498-31146517 None:intergenic 55.0%
!! ATCGACTCGGTGAGGGTAGT+GGG - chr7_1:31146621-31146640 Msa1016000:intron 55.0%
!! GTAGTGGGTCACTGGGTCAT+TGG - chr7_1:31146636-31146655 Msa1016000:intron 55.0%
CGGTTCGACCAATGACTCAG+TGG + chr7_1:31146667-31146686 None:intergenic 55.0%
AATAGGAAACGGCCCTGCCA+TGG + chr7_1:31147164-31147183 None:intergenic 55.0%
CCGGCGGGAATCGGTAAAAT+CGG + chr7_1:31147266-31147285 None:intergenic 55.0%
!!! CCGATTTTACCGATTCCCGC+CGG - chr7_1:31147263-31147282 Msa1016000:intron 55.0%
ATTGAACCGGTGAGAACCGG+CGG + chr7_1:31147282-31147301 None:intergenic 55.0%
TTACCCTTCCGGTTCACGGT+CGG - chr7_1:31147341-31147360 Msa1016000:intron 55.0%
! AAATGCCTTTTTCCGGGGGG+GGG + chr7_1:31147612-31147631 None:intergenic 55.0%
GTGAGAGGAAACCCACATGG+TGG + chr7_1:31147642-31147661 None:intergenic 55.0%
! ATTTTACAGGGCGCGGGAGA+AGG - chr7_1:31148440-31148459 Msa1016000:intron 55.0%
ATTAGGCGTGTCCCGATGTC+GGG - chr7_1:31149378-31149397 Msa1016000:intron 55.0%
AAGGAACGGAGGAAGAACGG+AGG - chr7_1:31150417-31150436 Msa1016000:intron 55.0%
! AACCGGACCGGTCATCGACT+CGG - chr7_1:31146608-31146627 Msa1016000:intron 60.0%
!! ACCGGTCATCGACTCGGTGA+GGG - chr7_1:31146614-31146633 Msa1016000:intron 60.0%
ACCCTCACCGAGTCGATGAC+CGG + chr7_1:31146618-31146637 None:intergenic 60.0%
!! CATCGACTCGGTGAGGGTAG+TGG - chr7_1:31146620-31146639 Msa1016000:intron 60.0%
!! GGTGAGGGTAGTGGGTCACT+GGG - chr7_1:31146629-31146648 Msa1016000:intron 60.0%
CCATGGATCGAGCAGGAGAG+TGG + chr7_1:31147147-31147166 None:intergenic 60.0%
CCACTCTCCTGCTCGATCCA+TGG - chr7_1:31147144-31147163 Msa1016000:intron 60.0%
TCTCCTGCTCGATCCATGGC+AGG - chr7_1:31147148-31147167 Msa1016000:intron 60.0%
CTCCTGCTCGATCCATGGCA+GGG - chr7_1:31147149-31147168 Msa1016000:intron 60.0%
TGCTTTGACCCGGTCTGCTC+AGG - chr7_1:31147223-31147242 Msa1016000:intron 60.0%
GGTGAGTTCCTGAGCAGACC+GGG + chr7_1:31147234-31147253 None:intergenic 60.0%
CGGTGAGTTCCTGAGCAGAC+CGG + chr7_1:31147235-31147254 None:intergenic 60.0%
CGGTCTGCTCAGGAACTCAC+CGG - chr7_1:31147233-31147252 Msa1016000:intron 60.0%
TTGAACCGGTGAGAACCGGC+GGG + chr7_1:31147281-31147300 None:intergenic 60.0%
CCGTGAACCGGAAGGGTAAC+CGG + chr7_1:31147340-31147359 None:intergenic 60.0%
CCGGTTACCCTTCCGGTTCA+CGG - chr7_1:31147337-31147356 Msa1016000:intron 60.0%
GGCGTGAGAGGAAACCCACA+TGG + chr7_1:31147645-31147664 None:intergenic 60.0%
CACCGAGTCGATGACCGGTC+CGG + chr7_1:31146613-31146632 None:intergenic 65.0%
!! GACCGGTCATCGACTCGGTG+AGG - chr7_1:31146613-31146632 Msa1016000:intron 65.0%
!! CGGTGAGGGTAGTGGGTCAC+TGG - chr7_1:31146628-31146647 Msa1016000:intron 65.0%
CGGTGAGAACCGGCGGGAAT+CGG + chr7_1:31147275-31147294 None:intergenic 65.0%
!! CGATTCCCGCCGGTTCTCAC+CGG - chr7_1:31147273-31147292 Msa1016000:intron 65.0%
GGTCCGACCGTGAACCGGAA+GGG + chr7_1:31147347-31147366 None:intergenic 65.0%
CTTCCGGTTCACGGTCGGAC+CGG - chr7_1:31147346-31147365 Msa1016000:intron 65.0%
CACGGTCGGACCGGTCCAAT+CGG - chr7_1:31147355-31147374 Msa1016000:intron 65.0%
! TTTTCCGGGGGGGGGAGTTG+CGG + chr7_1:31147604-31147623 None:intergenic 65.0%
CAACTCCCCCCCCCGGAAAA+AGG - chr7_1:31147604-31147623 Msa1016000:intron 65.0%
GGCCCTGCCATGGATCGAGC+AGG + chr7_1:31147154-31147173 None:intergenic 70.0%
CGGTCCGACCGTGAACCGGA+AGG + chr7_1:31147348-31147367 None:intergenic 70.0%
GGACCGGTCCGACCGTGAAC+CGG + chr7_1:31147352-31147371 None:intergenic 70.0%
GTCGGACCGGTCCAATCGGC+CGG - chr7_1:31147359-31147378 Msa1016000:intron 70.0%
ACCGGTCCAATCGGCCGGTC+CGG - chr7_1:31147364-31147383 Msa1016000:intron 70.0%
ACCGGACCGGCCGATTGGAC+CGG + chr7_1:31147368-31147387 None:intergenic 70.0%
TCCAATCGGCCGGTCCGGTC+CGG - chr7_1:31147369-31147388 Msa1016000:intron 70.0%
TCATCCGCAACTCCCCCCCC+CGG - chr7_1:31147597-31147616 Msa1016000:intron 70.0%
AGGGCGCGGGAGAAGGCCAT+AGG - chr7_1:31148447-31148466 Msa1016000:intron 70.0%
GCGCGGGAGAAGGCCATAGG+TGG - chr7_1:31148450-31148469 Msa1016000:intron 70.0%
ACCGGACCGGACCGGCCGAT+TGG + chr7_1:31147373-31147392 None:intergenic 75.0%
GGGGGGGGGAGTTGCGGATG+AGG + chr7_1:31147598-31147617 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 31141492 31153142 31141492 ID=Msa1016000;Name=Msa1016000
chr7_1 mRNA 31141492 31153142 31141492 ID=Msa1016000-mRNA-1;Parent=Msa1016000;Name=Msa1016000-mRNA-1;_AED=0.20;_eAED=0.24;_QI=24|0.57|0.6|1|0.71|0.8|15|133|475
chr7_1 exon 31141492 31141759 31141492 ID=Msa1016000-mRNA-1:exon:6216;Parent=Msa1016000-mRNA-1
chr7_1 exon 31141923 31141930 31141923 ID=Msa1016000-mRNA-1:exon:6215;Parent=Msa1016000-mRNA-1
chr7_1 exon 31142021 31142138 31142021 ID=Msa1016000-mRNA-1:exon:6214;Parent=Msa1016000-mRNA-1
chr7_1 exon 31142823 31142888 31142823 ID=Msa1016000-mRNA-1:exon:6213;Parent=Msa1016000-mRNA-1
chr7_1 exon 31142990 31143079 31142990 ID=Msa1016000-mRNA-1:exon:6212;Parent=Msa1016000-mRNA-1
chr7_1 exon 31145691 31145820 31145691 ID=Msa1016000-mRNA-1:exon:6211;Parent=Msa1016000-mRNA-1
chr7_1 exon 31145885 31145958 31145885 ID=Msa1016000-mRNA-1:exon:6210;Parent=Msa1016000-mRNA-1
chr7_1 exon 31149457 31149585 31149457 ID=Msa1016000-mRNA-1:exon:6209;Parent=Msa1016000-mRNA-1
chr7_1 exon 31149704 31149753 31149704 ID=Msa1016000-mRNA-1:exon:6208;Parent=Msa1016000-mRNA-1
chr7_1 exon 31149844 31149961 31149844 ID=Msa1016000-mRNA-1:exon:6207;Parent=Msa1016000-mRNA-1
chr7_1 exon 31150439 31150481 31150439 ID=Msa1016000-mRNA-1:exon:6206;Parent=Msa1016000-mRNA-1
chr7_1 exon 31150592 31150716 31150592 ID=Msa1016000-mRNA-1:exon:6205;Parent=Msa1016000-mRNA-1
chr7_1 exon 31150818 31150907 31150818 ID=Msa1016000-mRNA-1:exon:6204;Parent=Msa1016000-mRNA-1
chr7_1 exon 31152768 31152900 31152768 ID=Msa1016000-mRNA-1:exon:6203;Parent=Msa1016000-mRNA-1
chr7_1 exon 31153000 31153142 31153000 ID=Msa1016000-mRNA-1:exon:6202;Parent=Msa1016000-mRNA-1
chr7_1 five_prime_UTR 31153119 31153142 31153119 ID=Msa1016000-mRNA-1:five_prime_utr;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31153000 31153118 31153000 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31152768 31152900 31152768 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31150818 31150907 31150818 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31150592 31150716 31150592 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31150439 31150481 31150439 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31149844 31149961 31149844 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31149704 31149753 31149704 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31149457 31149585 31149457 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31145885 31145958 31145885 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31145691 31145820 31145691 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31142990 31143079 31142990 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31142823 31142888 31142823 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31142021 31142138 31142021 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31141923 31141930 31141923 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 CDS 31141625 31141759 31141625 ID=Msa1016000-mRNA-1:cds;Parent=Msa1016000-mRNA-1
chr7_1 three_prime_UTR 31141492 31141624 31141492 ID=Msa1016000-mRNA-1:three_prime_utr;Parent=Msa1016000-mRNA-1
Gene Sequence

>Msa1016000

ATGTCTTCTTGGAATTCAGTTCCACTTCATGTCTCTTATGAAGCTTTAGGGTGGTTTGCTTTTGTTTGTTGGTCAATTAGTTTTTGGCCTCAAGTGATCTTAAACTTTCGCAGGAAAAGTGTGGTTGGCTTGAACTTTGATTTCGTGTTGCTGAATTTGACAAAGCATACATCATATCTTATATACAATGCATCTTTGTTCTTTAGCTCTACAATTCAACAACAATATAGAGATAAATACGGCCAGAAAGAGATGATACCAGTGGCAGCAAATGATGTTGCATTCTCAGTCCATGCAGTACTACTAACAGCAGTGTCTTTGTTCCAAATTGCAATCTATGATCGTGGAAACCAGAAAGTATCTAAAATTGCTTGTGGAATAGTCACTGTTGCATGGACAACAGCAGTTGTGTGTTTCTTTATTGCATTGCACAATCATAATTGGCTATGGCTTCTCTCAATCTTCACTATCATTCAAGTTTCTATGACGGTCGTAAAATATATTCCTCAGGCGGTGATGAACTTCATGAGAAAAAGTACTGATGGATGGAGCATTTGGAACATTCTACTGGACTTTTCTGGAGGGGTAGCAAACTATGCACAAATGGCTATGCAATCCATTGATCAAGGTTCTTGGGTGAACTTCTATGGAAACATAGGGAAACTATTGCTATCCTTGGTGTCTATATTCTTTGACATCCTCTTCATCATCCAACATTATGTGTTATATCCTGAAAGAAAACGCAAATTAGAGACATCTCCTGACTTTGATAATGTCAAGTCTTCTGATCAGACATTGGCTGATAATTTTTTGGCCTCAAGTGATCTTAAACTTTCGCAGGAAAAGGTAATAAATAATCCAGAAAACAATACCTTACCATTTGTGGTTGGCTTGAACTTTGATTTCGTGTTGCTGAATTTGACAAAGCATACATCATATCTTATATACAATGCATCTTTGTTCTTTAGCTCTACAATTCAACAATATAGAGATAAATACGGCCAGAAAGAGATGATACCAGTGGCAGCAAATGATGTTGCATTCTCAGTCCATGCAGTACTACTAACAGCAGTTTCTTTGTTCCAAATTGCAATCTATGATCGTGGAAACCAGAAAGTATCTAAAATTGCTTGTGGAATAGTCACTGTTGCATGGACAACAGCACTTGCGGTGATGAACTTCATGAGAAAAAGTACTGATGGATGGAGCATTTGGAACATTCTACTGGACTTTTCTGGAGGGGTAGCAAACTATGCACAAATGGCTATGCAATCCATTGATCAAGGTTCTTGGGTGTCTATATTCTTTGACATCCTCTTCATCATCCAACATTATGTGTTATATCCTGAAAGAAAACGCAAATTAGAGACATCTCCTGACTTTGATAATGCCAAGTCTTCTGCTCAGACATTGGCTGAGAATGTCTAA

Protein sequence

>Msa1016000

MSSWNSVPLHVSYEALGWFAFVCWSISFWPQVILNFRRKSVVGLNFDFVLLNLTKHTSYLIYNASLFFSSTIQQQYRDKYGQKEMIPVAANDVAFSVHAVLLTAVSLFQIAIYDRGNQKVSKIACGIVTVAWTTAVVCFFIALHNHNWLWLLSIFTIIQVSMTVVKYIPQAVMNFMRKSTDGWSIWNILLDFSGGVANYAQMAMQSIDQGSWVNFYGNIGKLLLSLVSIFFDILFIIQHYVLYPERKRKLETSPDFDNVKSSDQTLADNFLASSDLKLSQEKVINNPENNTLPFVVGLNFDFVLLNLTKHTSYLIYNASLFFSSTIQQYRDKYGQKEMIPVAANDVAFSVHAVLLTAVSLFQIAIYDRGNQKVSKIACGIVTVAWTTALAVMNFMRKSTDGWSIWNILLDFSGGVANYAQMAMQSIDQGSWVSIFFDILFIIQHYVLYPERKRKLETSPDFDNAKSSAQTLAENV*