AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1020620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020620 MtrunA17_Chr7g0256251 97.808 365 8 0 1 365 1 365 0.0 743
Msa1020620 MtrunA17_Chr7g0256281 80.654 367 61 3 3 365 5 365 0.0 603
Msa1020620 MtrunA17_Chr4g0022261 64.365 362 119 6 1 362 1 352 5.52e-161 461
Msa1020620 MtrunA17_Chr1g0171021 41.425 379 202 8 6 366 2 378 5.14e-91 280
Msa1020620 MtrunA17_Chr1g0199431 38.667 375 202 8 11 365 8 374 6.63e-90 277
Msa1020620 MtrunA17_Chr7g0239021 35.602 382 216 9 5 366 13 384 1.08e-71 233
Msa1020620 MtrunA17_Chr8g0361631 42.920 226 129 0 141 366 19 244 1.45e-63 208
Msa1020620 MtrunA17_Chr7g0217401 42.601 223 128 0 143 365 43 265 2.44e-62 205
Msa1020620 MtrunA17_Chr7g0217381 42.601 223 128 0 143 365 42 264 6.71e-62 204
Msa1020620 MtrunA17_Chr8g0361211 42.731 227 130 0 141 367 63 289 9.42e-62 204
Msa1020620 MtrunA17_Chr7g0239011 43.363 226 127 1 142 366 62 287 2.12e-60 201
Msa1020620 MtrunA17_Chr3g0105861 39.631 217 121 2 146 357 46 257 7.25e-55 186
Msa1020620 MtrunA17_Chr3g0105831 40.196 204 121 1 156 358 3 206 2.54e-54 178
Msa1020620 MtrunA17_Chr3g0090101 42.925 212 121 0 154 365 7 218 2.80e-54 183
Msa1020620 MtrunA17_Chr8g0361591 43.564 202 114 0 164 365 2 203 1.61e-51 175
Msa1020620 MtrunA17_Chr8g0361641 40.594 202 120 0 164 365 2 203 1.76e-51 175
Msa1020620 MtrunA17_Chr3g0122241 33.333 228 146 2 143 366 79 304 9.25e-36 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020620 AT2G41190.2 55.172 377 144 8 3 365 5 370 3.11e-135 395
Msa1020620 AT2G41190.1 55.172 377 144 8 3 365 5 370 3.20e-135 396
Msa1020620 AT2G39130.3 37.143 385 213 9 7 365 2 383 1.57e-88 275
Msa1020620 AT5G02170.1 38.933 375 199 7 3 366 4 359 3.25e-88 276
Msa1020620 AT2G39130.2 37.143 385 213 9 7 365 2 383 3.91e-88 276
Msa1020620 AT2G39130.1 37.143 385 213 9 7 365 2 383 3.91e-88 276
Msa1020620 AT3G54830.2 38.070 373 202 5 3 362 14 370 7.16e-87 273
Msa1020620 AT3G54830.1 38.070 373 202 5 3 362 14 370 7.16e-87 273
Msa1020620 AT3G09340.1 40.691 376 178 6 16 365 1 357 7.45e-87 272
Msa1020620 AT5G02180.1 39.831 354 181 6 31 366 45 384 4.11e-85 268
Msa1020620 AT5G02180.2 39.831 354 181 6 31 366 45 384 4.11e-85 268
Msa1020620 AT3G09330.1 41.509 318 178 3 53 365 43 357 4.31e-80 254
Msa1020620 AT5G02170.2 34.667 375 186 8 3 366 4 330 2.45e-69 225
Msa1020620 AT5G15240.1 41.964 224 129 1 143 365 34 257 1.09e-59 199
Msa1020620 AT3G28960.5 39.910 223 134 0 143 365 17 239 1.81e-58 195
Msa1020620 AT3G28960.2 39.910 223 134 0 143 365 17 239 1.81e-58 195
Msa1020620 AT3G28960.3 39.910 223 134 0 143 365 17 239 1.81e-58 195
Msa1020620 AT3G28960.1 39.910 223 134 0 143 365 17 239 1.81e-58 195
Msa1020620 AT3G28960.4 40.964 166 98 0 200 365 5 170 1.02e-44 157
Msa1020620 AT5G15240.3 44.172 163 90 1 204 365 9 171 1.03e-42 152
Msa1020620 AT5G16740.1 33.333 225 147 2 143 367 34 255 5.08e-37 139
Msa1020620 AT5G15240.2 45.283 106 58 0 143 248 34 139 1.67e-24 102

Find 159 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCACTTATTTGCAATTT+TGG 0.077765 7_1:+44370037 Msa1020620:CDS
TTATGTCTGGTTTCTCTTTC+AGG 0.113235 7_1:+44370982 Msa1020620:three_prime_UTR
AGCATATTTGTTCATAATTA+AGG 0.153741 7_1:-44371113 None:intergenic
CTAATGTCTTGGTCTTATTT+AGG 0.169804 7_1:+44367047 Msa1020620:five_prime_UTR
TTCACTCAAACTATATTTAA+TGG 0.178459 7_1:+44368173 Msa1020620:CDS
TTGACTGCACTCATTGAAAA+TGG 0.228305 7_1:+44375855 Msa1020620:three_prime_UTR
CCCCAATATTTATCAGTCTA+TGG 0.230961 7_1:+44370427 Msa1020620:CDS
ATCAGGGCTCCATAATTATT+TGG 0.242735 7_1:+44375951 Msa1020620:three_prime_UTR
AATGCAGCTTCTCCTATATC+TGG 0.264199 7_1:-44368907 None:intergenic
AGTGGCCTTCCATTTGCTTT+TGG 0.264687 7_1:+44370368 Msa1020620:CDS
TCTGCAGCTGGAGGGGTTAT+TGG 0.265908 7_1:+44370260 Msa1020620:intron
TTCTTTGTTCTTATCGTTGT+TGG 0.268028 7_1:-44367250 None:intergenic
TGTTGAGAAGTGAAAGATTC+AGG 0.281155 7_1:-44367387 None:intergenic
AACCTTGCTGGTCTGTTTCC+TGG 0.285994 7_1:+44369978 Msa1020620:CDS
CTTTATCTACCAAATAATTA+TGG 0.286746 7_1:-44375960 None:intergenic
AACTAGGCTTGATCATATTA+TGG 0.299032 7_1:+44371060 Msa1020620:three_prime_UTR
GCAAGCTGGGTGGGTGAGTT+TGG 0.302207 7_1:+44368795 Msa1020620:CDS
AGCCATAGACTGATAAATAT+TGG 0.305863 7_1:-44370429 None:intergenic
GAAGCTGCATTTGGAAAATA+TGG 0.307995 7_1:+44368919 Msa1020620:CDS
GGGCTAGTGATGGCTTTAAT+TGG 0.315380 7_1:+44374016 Msa1020620:intron
GCTTCTTGTGTGTTTATTGT+TGG 0.318676 7_1:+44370296 Msa1020620:CDS
CTCAGAATTGATCCAAGATT+TGG 0.319513 7_1:-44367960 None:intergenic
GCCATAGACTGATAAATATT+GGG 0.321901 7_1:-44370428 None:intergenic
CCAGCTTGCTTCACAGTATC+AGG 0.330570 7_1:-44368781 None:intergenic
TTATTATTCTCCCTACTGTT+TGG 0.330762 7_1:+44370066 Msa1020620:CDS
GCATTGGGGAGGTTTAAATA+TGG 0.336781 7_1:+44370010 Msa1020620:CDS
GCCATGGGATTTCTCATGTT+TGG 0.340378 7_1:+44370801 Msa1020620:three_prime_UTR
ATAGCATCTCAAGCACTAAT+TGG 0.343623 7_1:+44371182 Msa1020620:three_prime_UTR
CTAAATAAGACCAAGACATT+AGG 0.343915 7_1:-44367046 None:intergenic
TGGTAGTGATAATGATAATA+AGG 0.344925 7_1:-44367099 None:intergenic
CCCCAATGCAAGTTTGTTCC+AGG 0.346385 7_1:-44369996 None:intergenic
TCTCCCTACTGTTTGGTTGA+AGG 0.347539 7_1:+44370073 Msa1020620:CDS
TTCTGAAAATTGTGGGGAAA+AGG 0.355690 7_1:+44374805 Msa1020620:three_prime_UTR
GATTCAATAATCAATCATTA+TGG 0.361003 7_1:+44367227 Msa1020620:exon
GAGGAATTGCCTATTGGTTA+TGG 0.364099 7_1:+44368143 Msa1020620:CDS
GGAGTACATGGAGGTTATTA+TGG 0.367641 7_1:-44376027 None:intergenic
TGCAGTTGTATGCTGTTATA+CGG 0.368562 7_1:+44368834 Msa1020620:CDS
GTTTAAAGAACCTGAGAGAT+AGG 0.376038 7_1:-44370111 None:intergenic
TCCTGGAACAAACTTGCATT+GGG 0.380776 7_1:+44369995 Msa1020620:CDS
ATTCCTGAGGAATTGCCTAT+TGG 0.382704 7_1:+44368137 Msa1020620:CDS
CTTTCTCCCACCATGTTGTT+GGG 0.383729 7_1:-44368097 None:intergenic
ATTGCTGCTGCACCAAATCT+TGG 0.388674 7_1:+44367948 Msa1020620:CDS
CTTCTTGTGTGTTTATTGTT+GGG 0.395309 7_1:+44370297 Msa1020620:CDS
ATGGAAGGTGATAACCTTGC+TGG 0.400809 7_1:+44369966 Msa1020620:CDS
CGGAATACACACACGACATT+TGG 0.409901 7_1:-44376051 None:intergenic
GATATAGGAGAAGCTGCATT+TGG 0.413036 7_1:+44368910 Msa1020620:CDS
GCAATGTTTCTAATTATGTC+TGG 0.423656 7_1:+44370969 Msa1020620:three_prime_UTR
TCTGCGCGATTAACAACATC+AGG 0.423794 7_1:+44375934 Msa1020620:three_prime_UTR
TTTAATATTGCATATAATCA+TGG 0.424055 7_1:-44370633 None:intergenic
TTCCTGGAACAAACTTGCAT+TGG 0.425103 7_1:+44369994 Msa1020620:CDS
TATAGTCCACAAGGAGACTT+TGG 0.426981 7_1:-44370877 None:intergenic
ATACCATATGATTATTGCCT+TGG 0.427255 7_1:-44370468 None:intergenic
TCAACATACTTGTAAGTTTG+AGG 0.428718 7_1:-44367414 None:intergenic
ACCATATGTGTAACACTCAA+TGG 0.429493 7_1:-44375806 None:intergenic
ATTAATATCATGGCTGGAGT+TGG 0.430739 7_1:+44368745 Msa1020620:CDS
ACAAGTATGTGTTACTATCA+AGG 0.434050 7_1:-44370694 None:intergenic
TTACCAAGGCAATAATCATA+TGG 0.437873 7_1:+44370465 Msa1020620:CDS
AAAATTAACTAATTTAATCA+AGG 0.439830 7_1:+44367071 Msa1020620:five_prime_UTR
GCTTTCTCCCACCATGTTGT+TGG 0.441518 7_1:-44368098 None:intergenic
ATCATTAGCTACCCAGATAT+AGG 0.443338 7_1:+44368895 Msa1020620:CDS
TCTGAAAATTGTGGGGAAAA+GGG 0.452112 7_1:+44374806 Msa1020620:three_prime_UTR
TGGGACCAAGGATAAGTAAC+TGG 0.453137 7_1:-44375786 None:intergenic
ACACTGGTCAATTTGTGAAC+TGG 0.454944 7_1:+44370345 Msa1020620:CDS
CTCTCAAACAGCAAACTAAA+CGG 0.455399 7_1:-44375891 None:intergenic
TAGAGTTATTATCACGGAAA+AGG 0.457231 7_1:-44371028 None:intergenic
TTAAACTATTCCTAATGTCT+TGG 0.464874 7_1:+44367036 Msa1020620:five_prime_UTR
AAGGTACATCCATAACCAAT+AGG 0.465111 7_1:-44368152 None:intergenic
AGGGGTTATTGGTACAACTT+TGG 0.469377 7_1:+44370271 Msa1020620:CDS
CGTATAATCTCCTATCTCTC+AGG 0.469783 7_1:+44370101 Msa1020620:CDS
GGAATAGTTTGTGCTTCCCT+TGG 0.470133 7_1:+44375696 Msa1020620:three_prime_UTR
GTCGTGGTAACATGCATGTC+AGG 0.475943 7_1:-44370659 None:intergenic
AATACACACACGACATTTGG+TGG 0.477876 7_1:-44376048 None:intergenic
TTCTCTCCTCAGTGTACTTG+TGG 0.485145 7_1:+44374039 Msa1020620:three_prime_UTR
ACGACATTTGGTGGAGTACA+TGG 0.486070 7_1:-44376039 None:intergenic
CTGGTTAGGGATTAATATCA+TGG 0.486076 7_1:+44368735 Msa1020620:intron
GATTAAATTATAATTAAAGA+TGG 0.487042 7_1:-44367119 None:intergenic
GGAAAAGGATATTTAGTTAG+CGG 0.493036 7_1:-44371013 None:intergenic
GTTGGGACAAGAAAAGATGT+TGG 0.495021 7_1:+44370314 Msa1020620:CDS
AACTCTATTTAAGTTGAACT+AGG 0.496149 7_1:+44371044 Msa1020620:three_prime_UTR
CAGTGTGGTAATTGCTGCAT+GGG 0.499377 7_1:+44375674 Msa1020620:three_prime_UTR
CCATAGATACCAAAAGCAAA+TGG 0.499463 7_1:-44370377 None:intergenic
TTAATATCATGGCTGGAGTT+GGG 0.500034 7_1:+44368746 Msa1020620:CDS
CCTCTACACTTCTTGCCAGT+GGG 0.501432 7_1:-44371147 None:intergenic
CCCATTGAGTGTTACACATA+TGG 0.501525 7_1:+44375805 Msa1020620:three_prime_UTR
ACAAACAACAGAATAGATAT+CGG 0.503711 7_1:+44367171 Msa1020620:five_prime_UTR
CCTGATACTGTGAAGCAAGC+TGG 0.504465 7_1:+44368781 Msa1020620:CDS
TCCTCTACACTTCTTGCCAG+TGG 0.506385 7_1:-44371148 None:intergenic
CATTCTGCTTAGAACAGCAC+TGG 0.506761 7_1:+44371210 Msa1020620:three_prime_UTR
AGCTGGGTGGGTGAGTTTGG+TGG 0.508431 7_1:+44368798 Msa1020620:CDS
GGATTTCTCATGTTTGGTGA+AGG 0.510889 7_1:+44370807 Msa1020620:three_prime_UTR
GAAAAGGATATTTAGTTAGC+GGG 0.512307 7_1:-44371012 None:intergenic
CCATATGTGTAACACTCAAT+GGG 0.512567 7_1:-44375805 None:intergenic
TCAGTGTGGTAATTGCTGCA+TGG 0.512619 7_1:+44375673 Msa1020620:three_prime_UTR
GTGATGATTCTGCAGCTGGA+GGG 0.515704 7_1:+44370252 Msa1020620:intron
ATATGGAGGCGTTGGAGCCA+TGG 0.516287 7_1:+44370785 Msa1020620:three_prime_UTR
TTAGGGATTAATATCATGGC+TGG 0.520290 7_1:+44368739 Msa1020620:intron
AGTGGCCAGTTACTTATCCT+TGG 0.522437 7_1:+44375781 Msa1020620:three_prime_UTR
TGATGATTCTGCAGCTGGAG+GGG 0.524848 7_1:+44370253 Msa1020620:intron
TCTGGTAATCAAATTCAAGA+AGG 0.525382 7_1:+44368071 Msa1020620:CDS
TATGGAGGCGTTGGAGCCAT+GGG 0.525606 7_1:+44370786 Msa1020620:three_prime_UTR
CATTGCTTTGAAAGCAGAGA+AGG 0.530891 7_1:+44368871 Msa1020620:CDS
GATTTCTCATGTTTGGTGAA+GGG 0.546918 7_1:+44370808 Msa1020620:three_prime_UTR
TACTGTGAAGCAAGCTGGGT+GGG 0.549540 7_1:+44368786 Msa1020620:CDS
CTGATACTGTGAAGCAAGCT+GGG 0.554497 7_1:+44368782 Msa1020620:CDS
ATAGAGATGAATATGTTCCA+AGG 0.555229 7_1:-44375713 None:intergenic
TGGGGAGGTTTAAATATGGA+TGG 0.556599 7_1:+44370014 Msa1020620:CDS
AGATCCTTCAACCAAACAGT+AGG 0.558177 7_1:-44370077 None:intergenic
TTGCTTCCAAAGTCTCCTTG+TGG 0.559184 7_1:+44370871 Msa1020620:three_prime_UTR
TATAATTTCAGGGCTAGTGA+TGG 0.561400 7_1:+44374006 Msa1020620:intron
ATGCAGCTTCTCCTATATCT+GGG 0.570220 7_1:-44368906 None:intergenic
TAATCTAGATTGCAGTGTCA+AGG 0.571997 7_1:+44370561 Msa1020620:three_prime_UTR
TTGTGTGGAATATATCATCA+TGG 0.574479 7_1:+44369947 Msa1020620:CDS
CTGGTAATCAAATTCAAGAA+GGG 0.575803 7_1:+44368072 Msa1020620:CDS
TCACAAATTGACCAGTGTGA+TGG 0.576885 7_1:-44370340 None:intergenic
AGTGACAGTAGCAATAATCA+TGG 0.577417 7_1:+44367339 Msa1020620:CDS
GGAACAAACTTGCATTGGGG+AGG 0.577469 7_1:+44369999 Msa1020620:CDS
TAACCAATAGGCAATTCCTC+AGG 0.580783 7_1:-44368140 None:intergenic
AGTTACTTAGAATTACATGA+TGG 0.583679 7_1:+44368032 Msa1020620:CDS
AATCTTTCACTTCTCAACAA+TGG 0.587279 7_1:+44367391 Msa1020620:CDS
ATTAAATATAGTTTGAGTGA+AGG 0.587311 7_1:-44368171 None:intergenic
GGTGCAGCAGCAATTGTCAA+AGG 0.594664 7_1:-44367939 None:intergenic
AATCAAAATTGTCTATTCAG+CGG 0.599040 7_1:-44376071 None:intergenic
AAACTTGAATAAAGAACACT+TGG 0.600794 7_1:-44367987 None:intergenic
AATTCAAATGCAAATTCCTG+AGG 0.604265 7_1:+44368124 Msa1020620:CDS
CCATAGACTGATAAATATTG+GGG 0.605278 7_1:-44370427 None:intergenic
AGATACCAAAAGCAAATGGA+AGG 0.608453 7_1:-44370373 None:intergenic
GTCTTACTGATATAATAACT+CGG 0.609716 7_1:-44368942 None:intergenic
TAGAGATGAATATGTTCCAA+GGG 0.610276 7_1:-44375712 None:intergenic
CTTAAATAGAGTTATTATCA+CGG 0.610527 7_1:-44371034 None:intergenic
CCCACTGGCAAGAAGTGTAG+AGG 0.612148 7_1:+44371147 Msa1020620:three_prime_UTR
ATGAACGTAGTCATATTGTG+TGG 0.614167 7_1:+44369932 Msa1020620:intron
TTAGTGCTTGAGATGCTATG+AGG 0.614744 7_1:-44371178 None:intergenic
TGCTTTGATGATGAACCCAC+TGG 0.614781 7_1:+44371132 Msa1020620:three_prime_UTR
CACTCTTTAATATCAGCAAG+TGG 0.616664 7_1:+44375763 Msa1020620:three_prime_UTR
GATCCTTCAACCAAACAGTA+GGG 0.617891 7_1:-44370076 None:intergenic
AGGGTTCCCAACAACATGGT+GGG 0.627128 7_1:+44368091 Msa1020620:CDS
ACCAAACATGAGAAATCCCA+TGG 0.628189 7_1:-44370802 None:intergenic
CTGTACAATAATAAATTGTG+AGG 0.633081 7_1:-44370741 None:intergenic
GGTCAATTTGTGAACTGGAG+TGG 0.634795 7_1:+44370350 Msa1020620:CDS
ATGGTCAAATGCAGCTAATG+CGG 0.634824 7_1:-44370614 None:intergenic
AAGAAGGGTTCCCAACAACA+TGG 0.636591 7_1:+44368087 Msa1020620:CDS
GTAGTTAACAGCTTCAATGT+CGG 0.637606 7_1:-44367313 None:intergenic
CCTGGAACAAACTTGCATTG+GGG 0.642214 7_1:+44369996 Msa1020620:CDS
TTCCAGGAAACAGACCAGCA+AGG 0.642307 7_1:-44369980 None:intergenic
GATGTTGGATTCCATCACAC+TGG 0.642828 7_1:+44370329 Msa1020620:CDS
CTCTATTAAAGATTGTGCAG+AGG 0.657659 7_1:+44375730 Msa1020620:three_prime_UTR
AATTCTTACTATAGTCCACA+AGG 0.662449 7_1:-44370886 None:intergenic
TGTAACACTCAATGGGACCA+AGG 0.662504 7_1:-44375798 None:intergenic
GTGGAATATATCATCATGGA+AGG 0.666854 7_1:+44369951 Msa1020620:CDS
TTGGAAGCAAATGCATCTCG+TGG 0.668817 7_1:-44370858 None:intergenic
AAGGGTTCCCAACAACATGG+TGG 0.673118 7_1:+44368090 Msa1020620:CDS
GAAAAGGGCTACAAGTACAC+AGG 0.679703 7_1:+44374821 Msa1020620:three_prime_UTR
ATACTGTGAAGCAAGCTGGG+TGG 0.692703 7_1:+44368785 Msa1020620:CDS
GCTGCAGGTTGCTCTCAGTG+TGG 0.693364 7_1:+44375659 Msa1020620:intron
CTGCGCGATTAACAACATCA+GGG 0.696150 7_1:+44375935 Msa1020620:three_prime_UTR
AATCTTGGATCAATTCTGAG+AGG 0.710885 7_1:+44367963 Msa1020620:CDS
ACATTTGGTGGAGTACATGG+AGG 0.722123 7_1:-44376036 None:intergenic
AGTGTGGTAATTGCTGCATG+GGG 0.745704 7_1:+44375675 Msa1020620:three_prime_UTR
TGCTTACCACAAGTACACTG+AGG 0.787165 7_1:-44374045 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAACTAATTTAATCA+AGG + chr7_1:44367071-44367090 Msa1020620:five_prime_UTR 10.0%
!! GATTAAATTATAATTAAAGA+TGG - chr7_1:44367122-44367141 None:intergenic 10.0%
!! TAACAAATAATACTTTAATA+TGG - chr7_1:44368639-44368658 None:intergenic 10.0%
!!! TTAAAGTATTATTTGTTATT+TGG + chr7_1:44368641-44368660 Msa1020620:intron 10.0%
!! TTAAATTCAAATTTATTGTA+CGG + chr7_1:44369446-44369465 Msa1020620:intron 10.0%
!! AAAAAAAAAAAAAAAAACCT+TGG - chr7_1:44370522-44370541 None:intergenic 10.0%
!!! AAAATATAATTTTAAGTTTC+CGG - chr7_1:44371502-44371521 None:intergenic 10.0%
!! TTAAATAAGAAAATACAAAA+TGG - chr7_1:44374297-44374316 None:intergenic 10.0%
!! ATATCTTATTATAAAAAAGT+TGG - chr7_1:44374533-44374552 None:intergenic 10.0%
!! ATAATTAAAATAATTGAACT+TGG - chr7_1:44374887-44374906 None:intergenic 10.0%
!!! AAAAGAGAATGAATATTTTT+TGG + chr7_1:44367272-44367291 Msa1020620:CDS 15.0%
!!! TCATTTTCTCAAAATATTAT+CGG - chr7_1:44368428-44368447 None:intergenic 15.0%
!! AAATTAATCAAAAGCAAAAA+CGG - chr7_1:44368967-44368986 None:intergenic 15.0%
!!! TTTTTGCTTTTGATTAATTT+TGG + chr7_1:44368967-44368986 Msa1020620:intron 15.0%
!!! TTTTGCTTTTGATTAATTTT+GGG + chr7_1:44368968-44368987 Msa1020620:intron 15.0%
!!! TCATTTTGTTTTATATCTTA+AGG + chr7_1:44369641-44369660 Msa1020620:intron 15.0%
!! TTTAATATTGCATATAATCA+TGG - chr7_1:44370636-44370655 None:intergenic 15.0%
!!! ACTATAGTAAGAATTTTTTT+GGG + chr7_1:44370894-44370913 Msa1020620:three_prime_UTR 15.0%
!!! AGTTTTTTTTTTTTCTTTCA+AGG + chr7_1:44370939-44370958 Msa1020620:three_prime_UTR 15.0%
!!! TTCTTAAATATTTTCATAGT+TGG - chr7_1:44371467-44371486 None:intergenic 15.0%
!! TTGATATATTTATTTGATGA+CGG - chr7_1:44373355-44373374 None:intergenic 15.0%
!! AATTATAATAAAAGATGTCA+CGG - chr7_1:44373993-44374012 None:intergenic 15.0%
!!! ACATCTTTTATTATAATTTC+AGG + chr7_1:44373995-44374014 Msa1020620:intron 15.0%
!!! CATCTTTTATTATAATTTCA+GGG + chr7_1:44373996-44374015 Msa1020620:intron 15.0%
!!! TCTTTCTAAATTTTTATTTC+GGG - chr7_1:44374246-44374265 None:intergenic 15.0%
!!! CTCTTTCTAAATTTTTATTT+CGG - chr7_1:44374247-44374266 None:intergenic 15.0%
!!! CAATCATTTTAAAATCAATT+TGG + chr7_1:44375227-44375246 Msa1020620:intron 15.0%
!! GATTCAATAATCAATCATTA+TGG + chr7_1:44367227-44367246 Msa1020620:exon 20.0%
!! AAATCTTTCTTAAACAATTG+AGG - chr7_1:44367753-44367772 None:intergenic 20.0%
!! ATTAAATATAGTTTGAGTGA+AGG - chr7_1:44368174-44368193 None:intergenic 20.0%
!! TTCACTCAAACTATATTTAA+TGG + chr7_1:44368173-44368192 Msa1020620:CDS 20.0%
!! TTATGTTAAGAATTTCACAT+TGG + chr7_1:44368254-44368273 Msa1020620:intron 20.0%
!!! TAACTTATAAACTCGTTTTT+AGG - chr7_1:44368291-44368310 None:intergenic 20.0%
!!! ATCATAACCTCTTAAATTTT+GGG - chr7_1:44368364-44368383 None:intergenic 20.0%
!! ATAAATGTGAAACTTGATAT+TGG + chr7_1:44368533-44368552 Msa1020620:intron 20.0%
!! TAAATGTGAAACTTGATATT+GGG + chr7_1:44368534-44368553 Msa1020620:intron 20.0%
!!! CTGTTTCCTTTATTTTTATT+TGG + chr7_1:44368682-44368701 Msa1020620:intron 20.0%
!!! TTTGCTTTTGATTAATTTTG+GGG + chr7_1:44368969-44368988 Msa1020620:intron 20.0%
!!! AATTTTAAATTAACAAGTGC+TGG - chr7_1:44369428-44369447 None:intergenic 20.0%
!! TAACATGTTGAAGAATTATA+AGG - chr7_1:44369590-44369609 None:intergenic 20.0%
!! AAACAAAATGATCAAAGATA+TGG - chr7_1:44369632-44369651 None:intergenic 20.0%
!! TATCATGATACATTATTTCA+TGG - chr7_1:44369667-44369686 None:intergenic 20.0%
!!! TATTTTTGTTTTCTACTTTG+TGG + chr7_1:44369810-44369829 Msa1020620:intron 20.0%
!! AGTAATAAAGGAAAAAGAAA+TGG - chr7_1:44369881-44369900 None:intergenic 20.0%
!!! TAACAAAAAAGATTTTACCA+AGG + chr7_1:44370451-44370470 Msa1020620:CDS 20.0%
!!! TACATAACTTTTTTTTTCAG+TGG + chr7_1:44370493-44370512 Msa1020620:exon 20.0%
!!! GACTATAGTAAGAATTTTTT+TGG + chr7_1:44370893-44370912 Msa1020620:three_prime_UTR 20.0%
!! CTTAAATAGAGTTATTATCA+CGG - chr7_1:44371037-44371056 None:intergenic 20.0%
!! AGCATATTTGTTCATAATTA+AGG - chr7_1:44371116-44371135 None:intergenic 20.0%
!!! AATATTTTCATAGTTGGAAT+AGG - chr7_1:44371461-44371480 None:intergenic 20.0%
!! TTAAGAATTTATAATGGTTC+CGG + chr7_1:44371480-44371499 Msa1020620:intron 20.0%
!! CATTATTTAGACAAGATATT+AGG + chr7_1:44371680-44371699 Msa1020620:intron 20.0%
!! TCAAGATTTATCTGATTATT+TGG + chr7_1:44372568-44372587 Msa1020620:intron 20.0%
!!! TGATATATTTATTTGATGAC+GGG - chr7_1:44373354-44373373 None:intergenic 20.0%
!! AATAAATATATCAATCAACC+TGG + chr7_1:44373361-44373380 Msa1020620:intron 20.0%
!! TTAAAAAAACATAAACTACC+AGG - chr7_1:44373382-44373401 None:intergenic 20.0%
!!! GTAGTTTATGTTTTTTTAAG+AGG + chr7_1:44373383-44373402 Msa1020620:intron 20.0%
!! ATATAATTTACTCAACTCTT+TGG + chr7_1:44373611-44373630 Msa1020620:intron 20.0%
!! ATGTATTAAAAAATCAACAC+TGG + chr7_1:44373941-44373960 Msa1020620:intron 20.0%
!!! TCTTACTCTATTTTTTTTCT+CGG + chr7_1:44374200-44374219 Msa1020620:intron 20.0%
!! TGTAAACTGTTATATAATGT+AGG + chr7_1:44374741-44374760 Msa1020620:intron 20.0%
!!! TTTATGTTTTCTGAAAATTG+TGG + chr7_1:44374797-44374816 Msa1020620:three_prime_UTR 20.0%
!!! TTATGTTTTCTGAAAATTGT+GGG + chr7_1:44374798-44374817 Msa1020620:three_prime_UTR 20.0%
!!! TCTGAAATTAATAATCAAAC+TGG - chr7_1:44374940-44374959 None:intergenic 20.0%
!! TTGATTATTAATTTCAGAAG+AGG + chr7_1:44374942-44374961 Msa1020620:intron 20.0%
!! TGATTATTAATTTCAGAAGA+GGG + chr7_1:44374943-44374962 Msa1020620:intron 20.0%
!!! TTATTTTTATTACCCTCTAA+AGG - chr7_1:44374970-44374989 None:intergenic 20.0%
!!! AACTTTTTTTCTCTTTTTTG+TGG + chr7_1:44375066-44375085 Msa1020620:intron 20.0%
!!! ACTTTTTTTCTCTTTTTTGT+GGG + chr7_1:44375067-44375086 Msa1020620:intron 20.0%
!!! CATGTTTCAACTTTATATTT+TGG + chr7_1:44375491-44375510 Msa1020620:intron 20.0%
!! CTTTATCTACCAAATAATTA+TGG - chr7_1:44375963-44375982 None:intergenic 20.0%
! TTAAACTATTCCTAATGTCT+TGG + chr7_1:44367036-44367055 Msa1020620:five_prime_UTR 25.0%
!! TGGTAGTGATAATGATAATA+AGG - chr7_1:44367102-44367121 None:intergenic 25.0%
! ACAAACAACAGAATAGATAT+CGG + chr7_1:44367171-44367190 Msa1020620:five_prime_UTR 25.0%
!! TTTTCATGTCAATTTTGTCT+AGG + chr7_1:44367475-44367494 Msa1020620:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr7_1:44367667-44367686 Msa1020620:intron 25.0%
! AGATTTAGAGATTAATGAGT+TGG + chr7_1:44367767-44367786 Msa1020620:intron 25.0%
!!! ATTTTGTTTATGTGATAGTG+AGG + chr7_1:44367908-44367927 Msa1020620:intron 25.0%
! AAACTTGAATAAAGAACACT+TGG - chr7_1:44367990-44368009 None:intergenic 25.0%
!!! TGTTCTTTATTCAAGTTTTG+TGG + chr7_1:44367992-44368011 Msa1020620:CDS 25.0%
!!! GTTCTTTATTCAAGTTTTGT+GGG + chr7_1:44367993-44368012 Msa1020620:CDS 25.0%
! AGTTACTTAGAATTACATGA+TGG + chr7_1:44368032-44368051 Msa1020620:CDS 25.0%
! AAAACGAGTTTATAAGTTAG+AGG + chr7_1:44368292-44368311 Msa1020620:intron 25.0%
!! CATCATAACCTCTTAAATTT+TGG - chr7_1:44368365-44368384 None:intergenic 25.0%
! AAATGTGAAACTTGATATTG+GGG + chr7_1:44368535-44368554 Msa1020620:intron 25.0%
! CCACTTCCAAATAAAAATAA+AGG - chr7_1:44368691-44368710 None:intergenic 25.0%
!!! CCTTTATTTTTATTTGGAAG+TGG + chr7_1:44368688-44368707 Msa1020620:intron 25.0%
! GTCTTACTGATATAATAACT+CGG - chr7_1:44368945-44368964 None:intergenic 25.0%
!!! TTGCTTTTGATTAATTTTGG+GGG + chr7_1:44368970-44368989 Msa1020620:intron 25.0%
!!! TAAGAGTATGTTTGTTTTGT+CGG + chr7_1:44369083-44369102 Msa1020620:intron 25.0%
! AACAAACTTAGTGTATGTTT+GGG - chr7_1:44369215-44369234 None:intergenic 25.0%
! AAACAAACTTAGTGTATGTT+TGG - chr7_1:44369216-44369235 None:intergenic 25.0%
! AAAGCGATTTGTATATGTAA+AGG + chr7_1:44369312-44369331 Msa1020620:intron 25.0%
! AACAGAATGAAAAGACAATA+AGG - chr7_1:44369501-44369520 None:intergenic 25.0%
! TATTTAACACTCCTGTTATA+GGG - chr7_1:44369726-44369745 None:intergenic 25.0%
! TTATTTAACACTCCTGTTAT+AGG - chr7_1:44369727-44369746 None:intergenic 25.0%
!!! ATAACAGGAGTGTTAAATAA+TGG + chr7_1:44369727-44369746 Msa1020620:intron 25.0%
! TTAAAACCAAACTATGCAAT+AGG - chr7_1:44369770-44369789 None:intergenic 25.0%
! TAGATCATGTAGAGTAATAA+AGG - chr7_1:44369893-44369912 None:intergenic 25.0%
!! TCTCCACAACTTAAAATTTT+CGG - chr7_1:44370155-44370174 None:intergenic 25.0%
! CTGTACAATAATAAATTGTG+AGG - chr7_1:44370744-44370763 None:intergenic 25.0%
!!! GTTTTGCCTTTTTTGTTATA+TGG + chr7_1:44370768-44370787 Msa1020620:three_prime_UTR 25.0%
!!! AACTCTATTTAAGTTGAACT+AGG + chr7_1:44371044-44371063 Msa1020620:three_prime_UTR 25.0%
! CATTAATACTTACCGAAAAA+AGG - chr7_1:44371268-44371287 None:intergenic 25.0%
! TATATCACTATAACTAGAGA+TGG + chr7_1:44371346-44371365 Msa1020620:intron 25.0%
!! TTTTAATATTGAGAACCAAC+TGG + chr7_1:44371518-44371537 Msa1020620:intron 25.0%
! TATCTTGTCTAAATAATGTG+AGG - chr7_1:44371678-44371697 None:intergenic 25.0%
! TATGGTATTGTTGTGTTTAT+TGG + chr7_1:44372122-44372141 Msa1020620:intron 25.0%
!!! AATTTTTCAAGTTGTGATAG+TGG - chr7_1:44372245-44372264 None:intergenic 25.0%
! TCACAACTTGAAAAATTGAA+TGG + chr7_1:44372248-44372267 Msa1020620:intron 25.0%
! TAGTGATGATCTTATTCTTA+AGG + chr7_1:44372634-44372653 Msa1020620:intron 25.0%
! AATAGACAAAACCAAACTTA+GGG - chr7_1:44372801-44372820 None:intergenic 25.0%
! GATTCAAAAGACTCAAAATA+GGG - chr7_1:44372824-44372843 None:intergenic 25.0%
! ATAAATCAGATGATCGTTAA+GGG - chr7_1:44373043-44373062 None:intergenic 25.0%
! TATAAATCAGATGATCGTTA+AGG - chr7_1:44373044-44373063 None:intergenic 25.0%
!!! TTATGTTTTTTTAAGAGGAC+TGG + chr7_1:44373388-44373407 Msa1020620:intron 25.0%
!!! TTTTCTAGTTTTTTTGAGAG+GGG - chr7_1:44373637-44373656 None:intergenic 25.0%
!!! CTTTTCTAGTTTTTTTGAGA+GGG - chr7_1:44373638-44373657 None:intergenic 25.0%
!!! TCAATCACTTTTTTATCATG+AGG + chr7_1:44373731-44373750 Msa1020620:intron 25.0%
!!! TAAATTTTTATTTCGGGTGA+GGG - chr7_1:44374240-44374259 None:intergenic 25.0%
! CAATAATGCTAACAAGTAAA+AGG - chr7_1:44374320-44374339 None:intergenic 25.0%
! ATTTATTACTTGTCATGTCT+GGG + chr7_1:44374349-44374368 Msa1020620:intron 25.0%
! ATCTAACTTGACTAACAAAT+AGG + chr7_1:44374436-44374455 Msa1020620:intron 25.0%
! TAATGTTGGGAACATTAAAA+AGG - chr7_1:44374664-44374683 None:intergenic 25.0%
!! TGTAGGATTTCTATATTTTC+AGG + chr7_1:44374758-44374777 Msa1020620:intron 25.0%
!! ATTTTCAGAAAACATAAAGC+CGG - chr7_1:44374795-44374814 None:intergenic 25.0%
!!! TATGTTTTCTGAAAATTGTG+GGG + chr7_1:44374799-44374818 Msa1020620:three_prime_UTR 25.0%
!!! CTTTTTTTCTCTTTTTTGTG+GGG + chr7_1:44375068-44375087 Msa1020620:intron 25.0%
! TTTATGAAATCACACAATCA+TGG + chr7_1:44375163-44375182 Msa1020620:intron 25.0%
!! ATCATGGATTTTTCCTTATA+TGG + chr7_1:44375179-44375198 Msa1020620:intron 25.0%
!! ATGTTTGAGACTCTAATTTA+AGG + chr7_1:44375415-44375434 Msa1020620:intron 25.0%
!! AATTTAAGGATTTGGTTTCA+CGG + chr7_1:44375429-44375448 Msa1020620:intron 25.0%
!!! AACTTTATATTTTGGACAGT+TGG + chr7_1:44375499-44375518 Msa1020620:intron 25.0%
!!! ACTTTATATTTTGGACAGTT+GGG + chr7_1:44375500-44375519 Msa1020620:intron 25.0%
! ATAGTGTAGATTTCATGAAT+TGG + chr7_1:44375547-44375566 Msa1020620:intron 25.0%
! AAACTTCAGGAGTAAAAATA+TGG - chr7_1:44375614-44375633 None:intergenic 25.0%
! TATAAAAGTCAAGAAACTTC+AGG - chr7_1:44375627-44375646 None:intergenic 25.0%
! AATCAAAATTGTCTATTCAG+CGG - chr7_1:44376074-44376093 None:intergenic 25.0%
CTAAATAAGACCAAGACATT+AGG - chr7_1:44367049-44367068 None:intergenic 30.0%
!! CTAATGTCTTGGTCTTATTT+AGG + chr7_1:44367047-44367066 Msa1020620:five_prime_UTR 30.0%
TTCTTTGTTCTTATCGTTGT+TGG - chr7_1:44367253-44367272 None:intergenic 30.0%
AATCTTTCACTTCTCAACAA+TGG + chr7_1:44367391-44367410 Msa1020620:CDS 30.0%
TCAACATACTTGTAAGTTTG+AGG - chr7_1:44367417-44367436 None:intergenic 30.0%
TGTTTATAACAGTGATCAGA+GGG - chr7_1:44367563-44367582 None:intergenic 30.0%
TTGTTTATAACAGTGATCAG+AGG - chr7_1:44367564-44367583 None:intergenic 30.0%
!! ATTTCTATTTCTACACCATC+CGG - chr7_1:44367689-44367708 None:intergenic 30.0%
! TAATGAGTTGGATCTCAATA+TGG + chr7_1:44367779-44367798 Msa1020620:intron 30.0%
! TGGTTTAGGATAAAACATTG+TGG + chr7_1:44367799-44367818 Msa1020620:intron 30.0%
TCTGGTAATCAAATTCAAGA+AGG + chr7_1:44368071-44368090 Msa1020620:CDS 30.0%
CTGGTAATCAAATTCAAGAA+GGG + chr7_1:44368072-44368091 Msa1020620:CDS 30.0%
AATTCAAATGCAAATTCCTG+AGG + chr7_1:44368124-44368143 Msa1020620:CDS 30.0%
ATTTCACATTGGATGAGATA+TGG + chr7_1:44368265-44368284 Msa1020620:intron 30.0%
!!! AACCTCTTAAATTTTGGGAT+GGG - chr7_1:44368359-44368378 None:intergenic 30.0%
!! TAACCTCTTAAATTTTGGGA+TGG - chr7_1:44368360-44368379 None:intergenic 30.0%
CCACAACATAAAATCTTTAG+AGG - chr7_1:44368575-44368594 None:intergenic 30.0%
!! CCTCTAAAGATTTTATGTTG+TGG + chr7_1:44368572-44368591 Msa1020620:intron 30.0%
!! GAAGTCATAGTTCTAAATTG+CGG - chr7_1:44368617-44368636 None:intergenic 30.0%
!! TTTAAATTAACAAGTGCTGG+AGG - chr7_1:44369425-44369444 None:intergenic 30.0%
AATAAGGTATAAAAAACCCG+AGG - chr7_1:44369485-44369504 None:intergenic 30.0%
TGTTAGAACCTAAATCTAGA+AGG - chr7_1:44369529-44369548 None:intergenic 30.0%
! AGATTTAGGTTCTAACATTG+TGG + chr7_1:44369532-44369551 Msa1020620:intron 30.0%
TTCTTCAACATGTTACTGAA+TGG + chr7_1:44369595-44369614 Msa1020620:intron 30.0%
TATAGGGAGTTTGAATGAAA+AGG - chr7_1:44369710-44369729 None:intergenic 30.0%
TTGTGTGGAATATATCATCA+TGG + chr7_1:44369947-44369966 Msa1020620:CDS 30.0%
! CAAGCACTTATTTGCAATTT+TGG + chr7_1:44370037-44370056 Msa1020620:CDS 30.0%
TTATTATTCTCCCTACTGTT+TGG + chr7_1:44370066-44370085 Msa1020620:CDS 30.0%
!!! GATCCGAAAATTTTAAGTTG+TGG + chr7_1:44370149-44370168 Msa1020620:intron 30.0%
CTACAAAGAGGTTGAAAATA+AGG - chr7_1:44370210-44370229 None:intergenic 30.0%
CTTCTTGTGTGTTTATTGTT+GGG + chr7_1:44370297-44370316 Msa1020620:CDS 30.0%
!! CATTTGCTTTTGGTATCTAT+GGG + chr7_1:44370378-44370397 Msa1020620:CDS 30.0%
CCATAGACTGATAAATATTG+GGG - chr7_1:44370430-44370449 None:intergenic 30.0%
GCCATAGACTGATAAATATT+GGG - chr7_1:44370431-44370450 None:intergenic 30.0%
AGCCATAGACTGATAAATAT+TGG - chr7_1:44370432-44370451 None:intergenic 30.0%
TTACCAAGGCAATAATCATA+TGG + chr7_1:44370465-44370484 Msa1020620:CDS 30.0%
ATACCATATGATTATTGCCT+TGG - chr7_1:44370471-44370490 None:intergenic 30.0%
! ACAAGTATGTGTTACTATCA+AGG - chr7_1:44370697-44370716 None:intergenic 30.0%
!!! TTGCCTTTTTTGTTATATGG+AGG + chr7_1:44370771-44370790 Msa1020620:three_prime_UTR 30.0%
AATTCTTACTATAGTCCACA+AGG - chr7_1:44370889-44370908 None:intergenic 30.0%
! GCAATGTTTCTAATTATGTC+TGG + chr7_1:44370969-44370988 Msa1020620:three_prime_UTR 30.0%
GAAAAGGATATTTAGTTAGC+GGG - chr7_1:44371015-44371034 None:intergenic 30.0%
GGAAAAGGATATTTAGTTAG+CGG - chr7_1:44371016-44371035 None:intergenic 30.0%
TAGAGTTATTATCACGGAAA+AGG - chr7_1:44371031-44371050 None:intergenic 30.0%
AACTAGGCTTGATCATATTA+TGG + chr7_1:44371060-44371079 Msa1020620:three_prime_UTR 30.0%
! GCTTTTGTGATTCCTTTTTT+CGG + chr7_1:44371253-44371272 Msa1020620:three_prime_UTR 30.0%
AGTATCAGATAATTGTAGCA+TGG - chr7_1:44371388-44371407 None:intergenic 30.0%
! ATTTTCATAGTTGGAATAGG+AGG - chr7_1:44371458-44371477 None:intergenic 30.0%
GGGAAAACATTAACTAAGAA+AGG - chr7_1:44371589-44371608 None:intergenic 30.0%
! TTAATGTTTTCCCTCATTCT+TGG + chr7_1:44371596-44371615 Msa1020620:intron 30.0%
! TAATGTTTTCCCTCATTCTT+GGG + chr7_1:44371597-44371616 Msa1020620:intron 30.0%
!! TTTATTCCCGTTTTTCTTTC+CGG + chr7_1:44371955-44371974 Msa1020620:intron 30.0%
AATAGAACCGGAAAGAAAAA+CGG - chr7_1:44371965-44371984 None:intergenic 30.0%
AATACCATATAACGAAGTCT+GGG - chr7_1:44372111-44372130 None:intergenic 30.0%
ATGGTAAGAACTATTTGAGT+TGG + chr7_1:44372267-44372286 Msa1020620:intron 30.0%
GGTATTCATATGTTGAGTTA+TGG + chr7_1:44372288-44372307 Msa1020620:intron 30.0%
ATATGTTGAGTTATGGTTCT+TGG + chr7_1:44372295-44372314 Msa1020620:intron 30.0%
TATGTTGAGTTATGGTTCTT+GGG + chr7_1:44372296-44372315 Msa1020620:intron 30.0%
TTAGTAAGATGGTATGAAAG+AGG - chr7_1:44372326-44372345 None:intergenic 30.0%
TTCATACCATCTTACTAAGA+AGG + chr7_1:44372328-44372347 Msa1020620:intron 30.0%
TGCTACATTGAAAGATGATT+GGG + chr7_1:44372364-44372383 Msa1020620:intron 30.0%
GCATAAGACTAAAAACCTTT+AGG + chr7_1:44372484-44372503 Msa1020620:intron 30.0%
CACTAACTAACATAAGTTTG+AGG - chr7_1:44372619-44372638 None:intergenic 30.0%
CATCATTTGGTAAAGAAACT+CGG - chr7_1:44372765-44372784 None:intergenic 30.0%
ATAGACAAAACCAAACTTAG+GGG - chr7_1:44372800-44372819 None:intergenic 30.0%
GAATAGACAAAACCAAACTT+AGG - chr7_1:44372802-44372821 None:intergenic 30.0%
GGATTCAAAAGACTCAAAAT+AGG - chr7_1:44372825-44372844 None:intergenic 30.0%
AAAGATGTATCTAGTACTTC+AGG - chr7_1:44372869-44372888 None:intergenic 30.0%
!! TGAACATTTACTTTTGTGGA+TGG - chr7_1:44373019-44373038 None:intergenic 30.0%
! TAATTTGCATACATCTGGAT+GGG - chr7_1:44373214-44373233 None:intergenic 30.0%
! ACTAGTAATTTGCATACATC+TGG - chr7_1:44373219-44373238 None:intergenic 30.0%
!! GCAAATTACTAGTCTTTGTA+TGG + chr7_1:44373226-44373245 Msa1020620:intron 30.0%
GCGATATACAAGATTAGTAT+CGG + chr7_1:44373423-44373442 Msa1020620:intron 30.0%
!! TGTTTGATGATGCAATAGTT+TGG - chr7_1:44373571-44373590 None:intergenic 30.0%
!!! GCTTTTCTAGTTTTTTTGAG+AGG - chr7_1:44373639-44373658 None:intergenic 30.0%
TAATGATCCAAGATAAGAAC+CGG - chr7_1:44373683-44373702 None:intergenic 30.0%
ATCTTGGATCATTAATGACA+TGG + chr7_1:44373689-44373708 Msa1020620:intron 30.0%
TCTTGGATCATTAATGACAT+GGG + chr7_1:44373690-44373709 Msa1020620:intron 30.0%
TTTATCATGAGGACAACTAT+TGG + chr7_1:44373742-44373761 Msa1020620:intron 30.0%
CAACTATTGGATCATCAAAT+AGG + chr7_1:44373755-44373774 Msa1020620:intron 30.0%
TTGGATCATCAAATAGGTAT+TGG + chr7_1:44373761-44373780 Msa1020620:intron 30.0%
!! TAAGTACCGTTCTGTTTTAA+AGG + chr7_1:44374113-44374132 Msa1020620:intron 30.0%
!! CTAAATTTTTATTTCGGGTG+AGG - chr7_1:44374241-44374260 None:intergenic 30.0%
CATTTATTACTTGTCATGTC+TGG + chr7_1:44374348-44374367 Msa1020620:intron 30.0%
TTTATTACTTGTCATGTCTG+GGG + chr7_1:44374350-44374369 Msa1020620:intron 30.0%
ATTCAGGAAGCTTAAATACA+AGG - chr7_1:44374388-44374407 None:intergenic 30.0%
! TTTTAGCAGAAGATTATGTG+TGG - chr7_1:44374417-44374436 None:intergenic 30.0%
AGAATATGAAGTTTCTGATC+TGG + chr7_1:44374478-44374497 Msa1020620:intron 30.0%
ACAAACACTAGTTCAAATCA+TGG - chr7_1:44374587-44374606 None:intergenic 30.0%
TTAATGTTCCCAACATTACA+TGG + chr7_1:44374666-44374685 Msa1020620:intron 30.0%
AATCAAGTCCATGTAATGTT+GGG - chr7_1:44374677-44374696 None:intergenic 30.0%
AAATCAAGTCCATGTAATGT+TGG - chr7_1:44374678-44374697 None:intergenic 30.0%
ATTTGCTTCAGCTAATTCTA+AGG + chr7_1:44374701-44374720 Msa1020620:intron 30.0%
AGTCTCAAACATTGAAAACT+AGG - chr7_1:44375407-44375426 None:intergenic 30.0%
GAGACTCTAATTTAAGGATT+TGG + chr7_1:44375421-44375440 Msa1020620:intron 30.0%
CACTATTGATCAAAATCGAA+CGG - chr7_1:44375533-44375552 None:intergenic 30.0%
AGATTTCATGAATTGGTCAA+AGG + chr7_1:44375554-44375573 Msa1020620:intron 30.0%
TCTATGATTGTTTGAGTGTA+GGG + chr7_1:44375579-44375598 Msa1020620:intron 30.0%
TAGAGATGAATATGTTCCAA+GGG - chr7_1:44375715-44375734 None:intergenic 30.0%
ATAGAGATGAATATGTTCCA+AGG - chr7_1:44375716-44375735 None:intergenic 30.0%
!! GCTGAATAGACAATTTTGAT+TGG + chr7_1:44376073-44376092 Msa1020620:three_prime_UTR 30.0%
GTAGTTAACAGCTTCAATGT+CGG - chr7_1:44367316-44367335 None:intergenic 35.0%
AGTGACAGTAGCAATAATCA+TGG + chr7_1:44367339-44367358 Msa1020620:CDS 35.0%
TGTTGAGAAGTGAAAGATTC+AGG - chr7_1:44367390-44367409 None:intergenic 35.0%
AAAATCGTATTCAAGCTCGA+TGG + chr7_1:44367711-44367730 Msa1020620:intron 35.0%
GTTGGATCTCAATATGGTTT+AGG + chr7_1:44367785-44367804 Msa1020620:intron 35.0%
CTCAGAATTGATCCAAGATT+TGG - chr7_1:44367963-44367982 None:intergenic 35.0%
AATCTTGGATCAATTCTGAG+AGG + chr7_1:44367963-44367982 Msa1020620:CDS 35.0%
! GGAAAGACATCTTTTCTATC+TGG + chr7_1:44368053-44368072 Msa1020620:CDS 35.0%
AAGGTACATCCATAACCAAT+AGG - chr7_1:44368155-44368174 None:intergenic 35.0%
!!! ACCTCTTAAATTTTGGGATG+GGG - chr7_1:44368358-44368377 None:intergenic 35.0%
TATAAAGCACAGACATGACA+TGG + chr7_1:44368391-44368410 Msa1020620:intron 35.0%
CATGATATTAATCCCTAACC+AGG - chr7_1:44368737-44368756 None:intergenic 35.0%
CTGGTTAGGGATTAATATCA+TGG + chr7_1:44368735-44368754 Msa1020620:intron 35.0%
TTAGGGATTAATATCATGGC+TGG + chr7_1:44368739-44368758 Msa1020620:intron 35.0%
ATTAATATCATGGCTGGAGT+TGG + chr7_1:44368745-44368764 Msa1020620:CDS 35.0%
TTAATATCATGGCTGGAGTT+GGG + chr7_1:44368746-44368765 Msa1020620:CDS 35.0%
TGCAGTTGTATGCTGTTATA+CGG + chr7_1:44368834-44368853 Msa1020620:CDS 35.0%
ATCATTAGCTACCCAGATAT+AGG + chr7_1:44368895-44368914 Msa1020620:CDS 35.0%
GAAGCTGCATTTGGAAAATA+TGG + chr7_1:44368919-44368938 Msa1020620:CDS 35.0%
ACATACTCTTAGTGTGTGTT+TGG - chr7_1:44369074-44369093 None:intergenic 35.0%
!!! AGTATGTTTGTTTTGTCGGT+AGG + chr7_1:44369087-44369106 Msa1020620:intron 35.0%
GTGAAATGCAATCAGACTTT+CGG + chr7_1:44369168-44369187 Msa1020620:intron 35.0%
!! GCTAGAAATGGACTAAATGA+AGG + chr7_1:44369279-44369298 Msa1020620:intron 35.0%
!!! ACGGTTCTTTTTTCATTCCT+CGG + chr7_1:44369465-44369484 Msa1020620:intron 35.0%
GTTTCCTTCCTTCTAGATTT+AGG + chr7_1:44369518-44369537 Msa1020620:intron 35.0%
AGAACCTAAATCTAGAAGGA+AGG - chr7_1:44369525-44369544 None:intergenic 35.0%
AACATGTTACTGAATGGTGT+AGG + chr7_1:44369601-44369620 Msa1020620:intron 35.0%
TCATTCAAACTCCCTATAAC+AGG + chr7_1:44369712-44369731 Msa1020620:intron 35.0%
!! ACAGGAGTGTTAAATAATGG+TGG + chr7_1:44369730-44369749 Msa1020620:intron 35.0%
ACTATGCAATAGGAAATGCA+TGG - chr7_1:44369760-44369779 None:intergenic 35.0%
GCATTTCCTATTGCATAGTT+TGG + chr7_1:44369761-44369780 Msa1020620:intron 35.0%
ATGAACGTAGTCATATTGTG+TGG + chr7_1:44369932-44369951 Msa1020620:intron 35.0%
GTGGAATATATCATCATGGA+AGG + chr7_1:44369951-44369970 Msa1020620:CDS 35.0%
GTTTAAAGAACCTGAGAGAT+AGG - chr7_1:44370114-44370133 None:intergenic 35.0%
GCTTCTTGTGTGTTTATTGT+TGG + chr7_1:44370296-44370315 Msa1020620:CDS 35.0%
AGATACCAAAAGCAAATGGA+AGG - chr7_1:44370376-44370395 None:intergenic 35.0%
CCATAGATACCAAAAGCAAA+TGG - chr7_1:44370380-44370399 None:intergenic 35.0%
!! CCATTTGCTTTTGGTATCTA+TGG + chr7_1:44370377-44370396 Msa1020620:CDS 35.0%
CCCCAATATTTATCAGTCTA+TGG + chr7_1:44370427-44370446 Msa1020620:CDS 35.0%
!!! TTTTTTTTCAGTGGCAACCA+AGG + chr7_1:44370502-44370521 Msa1020620:three_prime_UTR 35.0%
TAATCTAGATTGCAGTGTCA+AGG + chr7_1:44370561-44370580 Msa1020620:three_prime_UTR 35.0%
!!! AAGGTTTTAAATTGCAGTCG+TGG - chr7_1:44370678-44370697 None:intergenic 35.0%
ACGCCTCCATATAACAAAAA+AGG - chr7_1:44370777-44370796 None:intergenic 35.0%
!! TTTTTGTTATATGGAGGCGT+TGG + chr7_1:44370777-44370796 Msa1020620:three_prime_UTR 35.0%
! GATTTCTCATGTTTGGTGAA+GGG + chr7_1:44370808-44370827 Msa1020620:three_prime_UTR 35.0%
! TTATGTCTGGTTTCTCTTTC+AGG + chr7_1:44370982-44371001 Msa1020620:three_prime_UTR 35.0%
ATAGCATCTCAAGCACTAAT+TGG + chr7_1:44371182-44371201 Msa1020620:three_prime_UTR 35.0%
TCTCAACATAAACAACCAGT+TGG - chr7_1:44371536-44371555 None:intergenic 35.0%
CTAATCAATCCCAAGAATGA+GGG - chr7_1:44371609-44371628 None:intergenic 35.0%
ATAGAACCGGAAAGAAAAAC+GGG - chr7_1:44371964-44371983 None:intergenic 35.0%
! GTTTTTCTTTCCGGTTCTAT+TGG + chr7_1:44371964-44371983 Msa1020620:intron 35.0%
ACAGTGAAGAATCAACACAT+GGG - chr7_1:44372047-44372066 None:intergenic 35.0%
AACAGTGAAGAATCAACACA+TGG - chr7_1:44372048-44372067 None:intergenic 35.0%
!! GTGTTGATTCTTCACTGTTT+CGG + chr7_1:44372049-44372068 Msa1020620:intron 35.0%
CAATACCATATAACGAAGTC+TGG - chr7_1:44372112-44372131 None:intergenic 35.0%
! AAAGGTTGATTCCACGAAAA+GGG + chr7_1:44372189-44372208 Msa1020620:intron 35.0%
TAAGATGGTATGAAAGAGGT+TGG - chr7_1:44372322-44372341 None:intergenic 35.0%
GTGCTACATTGAAAGATGAT+TGG + chr7_1:44372363-44372382 Msa1020620:intron 35.0%
CATAACATGTCCTATATGGA+CGG - chr7_1:44372457-44372476 None:intergenic 35.0%
TCCATATAGGACATGTTATG+AGG + chr7_1:44372457-44372476 Msa1020620:intron 35.0%
ACCTCATAACATGTCCTATA+TGG - chr7_1:44372461-44372480 None:intergenic 35.0%
ATAGGACATGTTATGAGGTT+TGG + chr7_1:44372462-44372481 Msa1020620:intron 35.0%
! TTTGGATATCGTTAGCCTAA+AGG - chr7_1:44372502-44372521 None:intergenic 35.0%
GAACAGATTCATGCAATCTT+TGG - chr7_1:44372520-44372539 None:intergenic 35.0%
ATCTGAAGGGTAACTAAACT+GGG - chr7_1:44372542-44372561 None:intergenic 35.0%
! ATCTTGATTAGCCATCTGAA+GGG - chr7_1:44372555-44372574 None:intergenic 35.0%
! AATCTTGATTAGCCATCTGA+AGG - chr7_1:44372556-44372575 None:intergenic 35.0%
CTTATTCTTAAGGCGAAGTT+TGG + chr7_1:44372644-44372663 Msa1020620:intron 35.0%
GAAGTTTGGCAATATGATCA+TGG + chr7_1:44372658-44372677 Msa1020620:intron 35.0%
TCATGGTGTTTATCCTTCAT+AGG + chr7_1:44372675-44372694 Msa1020620:intron 35.0%
CATGGTGTTTATCCTTCATA+GGG + chr7_1:44372676-44372695 Msa1020620:intron 35.0%
GTATTATACCATGCTCCTTA+GGG - chr7_1:44372703-44372722 None:intergenic 35.0%
GTATAATACCACCATTCCTA+CGG + chr7_1:44372714-44372733 Msa1020620:intron 35.0%
! ACTGATTCAAAGTGGAAACT+CGG - chr7_1:44372897-44372916 None:intergenic 35.0%
GTTTCCACTTTGAATCAGTT+TGG + chr7_1:44372898-44372917 Msa1020620:intron 35.0%
!! TTACTTTTGTGGATGGCAAT+GGG - chr7_1:44373012-44373031 None:intergenic 35.0%
!! TTTACTTTTGTGGATGGCAA+TGG - chr7_1:44373013-44373032 None:intergenic 35.0%
!! GGGTTGAACATTTACTTTTG+TGG - chr7_1:44373023-44373042 None:intergenic 35.0%
TTCATTTGTCTCTATGCCAA+AGG + chr7_1:44373117-44373136 Msa1020620:intron 35.0%
TTTAGACTCTAACCGTACTT+GGG + chr7_1:44373182-44373201 Msa1020620:intron 35.0%
! GTAATTTGCATACATCTGGA+TGG - chr7_1:44373215-44373234 None:intergenic 35.0%
AGCAAAGTCCTACAGTAATT+TGG + chr7_1:44373286-44373305 Msa1020620:intron 35.0%
GCAAAGTCCTACAGTAATTT+GGG + chr7_1:44373287-44373306 Msa1020620:intron 35.0%
GGCAGATACTGTCATATTAA+TGG - chr7_1:44373482-44373501 None:intergenic 35.0%
TAATATGACAGTATCTGCCT+TGG + chr7_1:44373483-44373502 Msa1020620:intron 35.0%
! CCAGTACATTGATTGAATCT+TGG - chr7_1:44373535-44373554 None:intergenic 35.0%
CCAAGATTCAATCAATGTAC+TGG + chr7_1:44373532-44373551 Msa1020620:intron 35.0%
! TGTCATTGCTCTTTAAGAAC+CGG + chr7_1:44373661-44373680 Msa1020620:intron 35.0%
! TTAAGAACCGGTTCTTATCT+TGG + chr7_1:44373673-44373692 Msa1020620:intron 35.0%
TAGCGCTTCAAGATTTATCA+AGG - chr7_1:44373850-44373869 None:intergenic 35.0%
! TATAATTTCAGGGCTAGTGA+TGG + chr7_1:44374006-44374025 Msa1020620:intron 35.0%
CTTGTGGTAAGCATACATTT+AGG + chr7_1:44374055-44374074 Msa1020620:intron 35.0%
AGTTGCATTCAATATGTGCA+AGG + chr7_1:44374084-44374103 Msa1020620:intron 35.0%
!! CACGTTCCTTTAAAACAGAA+CGG - chr7_1:44374122-44374141 None:intergenic 35.0%
TTTAAAGGAACGTGGTTTGA+AGG + chr7_1:44374128-44374147 Msa1020620:intron 35.0%
TTAAAGGAACGTGGTTTGAA+GGG + chr7_1:44374129-44374148 Msa1020620:intron 35.0%
CTTGACTAACAAATAGGCAT+TGG + chr7_1:44374442-44374461 Msa1020620:intron 35.0%
!! ACAAATAGGCATTGGTATGT+AGG + chr7_1:44374450-44374469 Msa1020620:intron 35.0%
!! CAAATAGGCATTGGTATGTA+GGG + chr7_1:44374451-44374470 Msa1020620:intron 35.0%
GTTGGGAACATTAAAAAGGT+AGG - chr7_1:44374660-44374679 None:intergenic 35.0%
! TTCTGAAAATTGTGGGGAAA+AGG + chr7_1:44374805-44374824 Msa1020620:three_prime_UTR 35.0%
TCTGAAAATTGTGGGGAAAA+GGG + chr7_1:44374806-44374825 Msa1020620:three_prime_UTR 35.0%
AAATAGTTGCAACTTGCAAG+AGG + chr7_1:44375120-44375139 Msa1020620:intron 35.0%
TTGCAAGAGGAAAACAGATT+TGG + chr7_1:44375133-44375152 Msa1020620:intron 35.0%
TGAGCTGTGAAATCCATATA+AGG - chr7_1:44375195-44375214 None:intergenic 35.0%
ACTCTTAGAACAAGATTGGA+TGG + chr7_1:44375466-44375485 Msa1020620:intron 35.0%
GTCTATGATTGTTTGAGTGT+AGG + chr7_1:44375578-44375597 Msa1020620:intron 35.0%
CTCTATTAAAGATTGTGCAG+AGG + chr7_1:44375730-44375749 Msa1020620:three_prime_UTR 35.0%
CACTCTTTAATATCAGCAAG+TGG + chr7_1:44375763-44375782 Msa1020620:three_prime_UTR 35.0%
CCATATGTGTAACACTCAAT+GGG - chr7_1:44375808-44375827 None:intergenic 35.0%
ACCATATGTGTAACACTCAA+TGG - chr7_1:44375809-44375828 None:intergenic 35.0%
TTGACTGCACTCATTGAAAA+TGG + chr7_1:44375855-44375874 Msa1020620:three_prime_UTR 35.0%
CTCTCAAACAGCAAACTAAA+CGG - chr7_1:44375894-44375913 None:intergenic 35.0%
ATCAGGGCTCCATAATTATT+TGG + chr7_1:44375951-44375970 Msa1020620:three_prime_UTR 35.0%
TGCTTATAATAGTGACCGGA+TGG + chr7_1:44367671-44367690 Msa1020620:intron 40.0%
TTCAAGCTCGATGGTTGAAA+TGG + chr7_1:44367720-44367739 Msa1020620:intron 40.0%
!! AAGCCTTATTCCACTAAGTG+GGG - chr7_1:44367848-44367867 None:intergenic 40.0%
!! CAAGCCTTATTCCACTAAGT+GGG - chr7_1:44367849-44367868 None:intergenic 40.0%
ATTCCTGAGGAATTGCCTAT+TGG + chr7_1:44368137-44368156 Msa1020620:CDS 40.0%
TAACCAATAGGCAATTCCTC+AGG - chr7_1:44368143-44368162 None:intergenic 40.0%
! GAGGAATTGCCTATTGGTTA+TGG + chr7_1:44368143-44368162 Msa1020620:CDS 40.0%
! ATCTTTAGAGGTCTTCGTAG+TGG - chr7_1:44368563-44368582 None:intergenic 40.0%
!! TAGTTCTAAATTGCGGTCCA+CGG - chr7_1:44368610-44368629 None:intergenic 40.0%
TTGGAAGTGGTCATTTGATG+AGG + chr7_1:44368701-44368720 Msa1020620:intron 40.0%
TGATGAGGTAATGTTGTACC+TGG + chr7_1:44368716-44368735 Msa1020620:intron 40.0%
AGGTAATGTTGTACCTGGTT+AGG + chr7_1:44368721-44368740 Msa1020620:intron 40.0%
GGTAATGTTGTACCTGGTTA+GGG + chr7_1:44368722-44368741 Msa1020620:intron 40.0%
!! CATTGCTTTGAAAGCAGAGA+AGG + chr7_1:44368871-44368890 Msa1020620:CDS 40.0%
ATGCAGCTTCTCCTATATCT+GGG - chr7_1:44368909-44368928 None:intergenic 40.0%
AATGCAGCTTCTCCTATATC+TGG - chr7_1:44368910-44368929 None:intergenic 40.0%
GATATAGGAGAAGCTGCATT+TGG + chr7_1:44368910-44368929 Msa1020620:CDS 40.0%
!! TTGTTTTGTCGGTAGGCAAA+AGG + chr7_1:44369094-44369113 Msa1020620:intron 40.0%
!!! GTTCCTTTTGAAGCTACAGT+CGG + chr7_1:44369126-44369145 Msa1020620:intron 40.0%
AGTCTGATTGCATTTCACTG+TGG - chr7_1:44369166-44369185 None:intergenic 40.0%
!! GTGAATGATTAGTCTCGCAA+TGG + chr7_1:44369257-44369276 Msa1020620:intron 40.0%
TGCAGTGTCTTAGTATCTCT+AGG + chr7_1:44369355-44369374 Msa1020620:intron 40.0%
AGTGTCTTAGTATCTCTAGG+TGG + chr7_1:44369358-44369377 Msa1020620:intron 40.0%
TTAGTATCTCTAGGTGGTCT+TGG + chr7_1:44369364-44369383 Msa1020620:intron 40.0%
AATTGGCATGTTATTGCTCC+TGG + chr7_1:44369388-44369407 Msa1020620:intron 40.0%
!!! CGGTTCTTTTTTCATTCCTC+GGG + chr7_1:44369466-44369485 Msa1020620:intron 40.0%
TTCCTGGAACAAACTTGCAT+TGG + chr7_1:44369994-44370013 Msa1020620:CDS 40.0%
TCCTGGAACAAACTTGCATT+GGG + chr7_1:44369995-44370014 Msa1020620:CDS 40.0%
GCATTGGGGAGGTTTAAATA+TGG + chr7_1:44370010-44370029 Msa1020620:CDS 40.0%
TGGGGAGGTTTAAATATGGA+TGG + chr7_1:44370014-44370033 Msa1020620:CDS 40.0%
GATCCTTCAACCAAACAGTA+GGG - chr7_1:44370079-44370098 None:intergenic 40.0%
AGATCCTTCAACCAAACAGT+AGG - chr7_1:44370080-44370099 None:intergenic 40.0%
CGTATAATCTCCTATCTCTC+AGG + chr7_1:44370101-44370120 Msa1020620:CDS 40.0%
! AGTAAGTGCTTGCTACAAAG+AGG - chr7_1:44370222-44370241 None:intergenic 40.0%
AGGGGTTATTGGTACAACTT+TGG + chr7_1:44370271-44370290 Msa1020620:CDS 40.0%
GTTGGGACAAGAAAAGATGT+TGG + chr7_1:44370314-44370333 Msa1020620:CDS 40.0%
TCACAAATTGACCAGTGTGA+TGG - chr7_1:44370343-44370362 None:intergenic 40.0%
ACACTGGTCAATTTGTGAAC+TGG + chr7_1:44370345-44370364 Msa1020620:CDS 40.0%
! ATCTATGGGTTTTGCTTTGC+AGG + chr7_1:44370392-44370411 Msa1020620:CDS 40.0%
! GATTGCAGTGTCAAGGTTTT+TGG + chr7_1:44370568-44370587 Msa1020620:three_prime_UTR 40.0%
ATGGTCAAATGCAGCTAATG+CGG - chr7_1:44370617-44370636 None:intergenic 40.0%
ACCAAACATGAGAAATCCCA+TGG - chr7_1:44370805-44370824 None:intergenic 40.0%
! GGATTTCTCATGTTTGGTGA+AGG + chr7_1:44370807-44370826 Msa1020620:three_prime_UTR 40.0%
TATAGTCCACAAGGAGACTT+TGG - chr7_1:44370880-44370899 None:intergenic 40.0%
TTAGTGCTTGAGATGCTATG+AGG - chr7_1:44371181-44371200 None:intergenic 40.0%
CCTAATCAATCCCAAGAATG+AGG - chr7_1:44371610-44371629 None:intergenic 40.0%
CCTCATTCTTGGGATTGATT+AGG + chr7_1:44371607-44371626 Msa1020620:intron 40.0%
CATTCTTGGGATTGATTAGG+AGG + chr7_1:44371610-44371629 Msa1020620:intron 40.0%
!! TCAAAACCCTGGCTTTTCTT+TGG + chr7_1:44371729-44371748 Msa1020620:intron 40.0%
TCACGTTTCTTTGTTGCTGA+TGG - chr7_1:44371814-44371833 None:intergenic 40.0%
GATTTCGACAGTAGGCAAAT+CGG - chr7_1:44371860-44371879 None:intergenic 40.0%
AGCGCAAAAATAAGACCAGA+GGG - chr7_1:44371931-44371950 None:intergenic 40.0%
TTTCGTGGAATCAACCTTTG+CGG - chr7_1:44372188-44372207 None:intergenic 40.0%
! CAAAGGTTGATTCCACGAAA+AGG + chr7_1:44372188-44372207 Msa1020620:intron 40.0%
! AAGGTTGATTCCACGAAAAG+GGG + chr7_1:44372190-44372209 Msa1020620:intron 40.0%
!! TTGTGATAGTGGTCATTCCT+CGG - chr7_1:44372234-44372253 None:intergenic 40.0%
CGAAAGCCTTCTTAGTAAGA+TGG - chr7_1:44372337-44372356 None:intergenic 40.0%
ACTAAGAAGGCTTTCGAGAT+TGG + chr7_1:44372341-44372360 Msa1020620:intron 40.0%
ATCAACTCATATCTCTGCTG+TGG + chr7_1:44372399-44372418 Msa1020620:intron 40.0%
! TTTTATTGAGCCTCAGCTGA+TGG + chr7_1:44372424-44372443 Msa1020620:intron 40.0%
TGGTACATTTCCGTCCATAT+AGG + chr7_1:44372444-44372463 Msa1020620:intron 40.0%
CATCTGAAGGGTAACTAAAC+TGG - chr7_1:44372543-44372562 None:intergenic 40.0%
CAGTTTAGTTACCCTTCAGA+TGG + chr7_1:44372541-44372560 Msa1020620:intron 40.0%
AAGTTTGAGGACGTCAATAG+TGG - chr7_1:44372606-44372625 None:intergenic 40.0%
GGTATTATACCATGCTCCTT+AGG - chr7_1:44372704-44372723 None:intergenic 40.0%
GCGGTCATAATCTCATCATT+TGG - chr7_1:44372778-44372797 None:intergenic 40.0%
AGGAACAAAAGATAGAGGTG+TGG - chr7_1:44372846-44372865 None:intergenic 40.0%
TCAGGAGGAACAAAAGATAG+AGG - chr7_1:44372851-44372870 None:intergenic 40.0%
GATGTATCTAGTACTTCAGG+AGG - chr7_1:44372866-44372885 None:intergenic 40.0%
CTGATTCAAAGTGGAAACTC+GGG - chr7_1:44372896-44372915 None:intergenic 40.0%
! GATGCCAAACTGATTCAAAG+TGG - chr7_1:44372905-44372924 None:intergenic 40.0%
AATAGGTGGGAGACAAACAA+CGG - chr7_1:44373078-44373097 None:intergenic 40.0%
! GAAACGAAAGCACAATAGGT+GGG - chr7_1:44373091-44373110 None:intergenic 40.0%
! AGAAACGAAAGCACAATAGG+TGG - chr7_1:44373092-44373111 None:intergenic 40.0%
! AGCAGAAACGAAAGCACAAT+AGG - chr7_1:44373095-44373114 None:intergenic 40.0%
AGCTGACATGTCATCAAGTA+TGG - chr7_1:44373163-44373182 None:intergenic 40.0%
CTTTAGACTCTAACCGTACT+TGG + chr7_1:44373181-44373200 Msa1020620:intron 40.0%
GGATCATCCCAAATTACTGT+AGG - chr7_1:44373297-44373316 None:intergenic 40.0%
! ATTTGGGATGATCCATTGTG+AGG + chr7_1:44373303-44373322 Msa1020620:intron 40.0%
! AGAGGACTGGTAGTTTATGT+TGG + chr7_1:44373401-44373420 Msa1020620:intron 40.0%
CATGTTTAACTACTCCACCA+AGG - chr7_1:44373503-44373522 None:intergenic 40.0%
TACGTGTCAGATGGAAAACA+TGG + chr7_1:44373967-44373986 Msa1020620:intron 40.0%
!!! CGTTCTGTTTTAAAGGAACG+TGG + chr7_1:44374120-44374139 Msa1020620:intron 40.0%
ATGTGATGTTTACTCCTGCA+AGG + chr7_1:44374556-44374575 Msa1020620:intron 40.0%
!! TTTTCAGGCAATCGTATTGC+CGG + chr7_1:44374773-44374792 Msa1020620:intron 40.0%
TGCTTAACTGCAGAGAATTG+TGG + chr7_1:44375311-44375330 Msa1020620:intron 40.0%
! GTCGACTCTTAGAACAAGAT+TGG + chr7_1:44375462-44375481 Msa1020620:intron 40.0%
ATAATGTCATCATCTGCTGC+AGG + chr7_1:44375644-44375663 Msa1020620:intron 40.0%
CCCATTGAGTGTTACACATA+TGG + chr7_1:44375805-44375824 Msa1020620:three_prime_UTR 40.0%
GGAGTACATGGAGGTTATTA+TGG - chr7_1:44376030-44376049 None:intergenic 40.0%
AATACACACACGACATTTGG+TGG - chr7_1:44376051-44376070 None:intergenic 40.0%
CTTATTCCACTAAGTGGGGT+CGG - chr7_1:44367844-44367863 None:intergenic 45.0%
!! CCAAGCCTTATTCCACTAAG+TGG - chr7_1:44367850-44367869 None:intergenic 45.0%
CCACTTAGTGGAATAAGGCT+TGG + chr7_1:44367847-44367866 Msa1020620:intron 45.0%
ATTGCTGCTGCACCAAATCT+TGG + chr7_1:44367948-44367967 Msa1020620:CDS 45.0%
AAGAAGGGTTCCCAACAACA+TGG + chr7_1:44368087-44368106 Msa1020620:CDS 45.0%
CTTTCTCCCACCATGTTGTT+GGG - chr7_1:44368100-44368119 None:intergenic 45.0%
GCATCTCTCATCTTGTAAGC+CGG + chr7_1:44368314-44368333 Msa1020620:intron 45.0%
GCCCCATCCCAAAATTTAAG+AGG + chr7_1:44368354-44368373 Msa1020620:intron 45.0%
AGTTAGTGTCGTGTCTGTGT+CGG + chr7_1:44368474-44368493 Msa1020620:intron 45.0%
ACAGCGACACTTAAGATCGA+AGG - chr7_1:44368512-44368531 None:intergenic 45.0%
CTGATACTGTGAAGCAAGCT+GGG + chr7_1:44368782-44368801 Msa1020620:CDS 45.0%
! CTACCGACTGTAGCTTCAAA+AGG - chr7_1:44369132-44369151 None:intergenic 45.0%
TGCAATCAGACTTTCGGTAG+TGG + chr7_1:44369174-44369193 Msa1020620:intron 45.0%
AGTCTCGCAATGGCTAGAAA+TGG + chr7_1:44369267-44369286 Msa1020620:intron 45.0%
! CTCTAGGTGGTCTTGGTAAT+TGG + chr7_1:44369371-44369390 Msa1020620:intron 45.0%
!! TAACAAGTGCTGGAGGTTCA+AGG - chr7_1:44369418-44369437 None:intergenic 45.0%
ATGGAAGGTGATAACCTTGC+TGG + chr7_1:44369966-44369985 Msa1020620:CDS 45.0%
CCTGGAACAAACTTGCATTG+GGG + chr7_1:44369996-44370015 Msa1020620:CDS 45.0%
TCTCCCTACTGTTTGGTTGA+AGG + chr7_1:44370073-44370092 Msa1020620:CDS 45.0%
ACTTGTGATGATTCTGCAGC+TGG + chr7_1:44370248-44370267 Msa1020620:intron 45.0%
GATGTTGGATTCCATCACAC+TGG + chr7_1:44370329-44370348 Msa1020620:CDS 45.0%
GGTCAATTTGTGAACTGGAG+TGG + chr7_1:44370350-44370369 Msa1020620:CDS 45.0%
! AGTGGCCTTCCATTTGCTTT+TGG + chr7_1:44370368-44370387 Msa1020620:CDS 45.0%
GCCATGGGATTTCTCATGTT+TGG + chr7_1:44370801-44370820 Msa1020620:three_prime_UTR 45.0%
TTGGAAGCAAATGCATCTCG+TGG - chr7_1:44370861-44370880 None:intergenic 45.0%
TTGCTTCCAAAGTCTCCTTG+TGG + chr7_1:44370871-44370890 Msa1020620:three_prime_UTR 45.0%
!! TGCTTTGATGATGAACCCAC+TGG + chr7_1:44371132-44371151 Msa1020620:three_prime_UTR 45.0%
CATTCTGCTTAGAACAGCAC+TGG + chr7_1:44371210-44371229 Msa1020620:three_prime_UTR 45.0%
!!! AAAAGCCAGGGTTTTGAACC+TGG - chr7_1:44371726-44371745 None:intergenic 45.0%
CAACAGCCAAAGAAAAGCCA+GGG - chr7_1:44371738-44371757 None:intergenic 45.0%
! TGATGGATGAGGTCAAACAG+AGG - chr7_1:44371776-44371795 None:intergenic 45.0%
CGTTTCTTTGTTGCTGATGG+CGG - chr7_1:44371811-44371830 None:intergenic 45.0%
GCAAAAATAAGACCAGAGGG+TGG - chr7_1:44371928-44371947 None:intergenic 45.0%
CAGCGCAAAAATAAGACCAG+AGG - chr7_1:44371932-44371951 None:intergenic 45.0%
! TTTTACCGCCTCAAACCTGT+TGG + chr7_1:44372072-44372091 Msa1020620:intron 45.0%
TGACCAAACCAACAGGTTTG+AGG - chr7_1:44372083-44372102 None:intergenic 45.0%
TTCGTGGAATCAACCTTTGC+GGG - chr7_1:44372187-44372206 None:intergenic 45.0%
! TGATATCAAGCCCCTTTTCG+TGG - chr7_1:44372203-44372222 None:intergenic 45.0%
TTGATATCATCTGCACTCCG+AGG + chr7_1:44372214-44372233 Msa1020620:intron 45.0%
TATCCTTCATAGGGTCCCTA+AGG + chr7_1:44372685-44372704 Msa1020620:intron 45.0%
TAATACCACCATTCCTACGG+TGG + chr7_1:44372717-44372736 Msa1020620:intron 45.0%
AAGTTCTTCCACCGTAGGAA+TGG - chr7_1:44372728-44372747 None:intergenic 45.0%
CTGATAAGTTCTTCCACCGT+AGG - chr7_1:44372733-44372752 None:intergenic 45.0%
ATTATGACCGCCCCTAAGTT+TGG + chr7_1:44372787-44372806 Msa1020620:intron 45.0%
GACAAAACCAAACTTAGGGG+CGG - chr7_1:44372797-44372816 None:intergenic 45.0%
TTGTCCAAACCTTCGCTCAT+AGG - chr7_1:44372929-44372948 None:intergenic 45.0%
ATGGGAAAATGAGCAGACAC+AGG - chr7_1:44372994-44373013 None:intergenic 45.0%
! CTCTATGCCAAAGGCTTTTC+AGG + chr7_1:44373126-44373145 Msa1020620:intron 45.0%
!! ATGCCAAAGGCTTTTCAGGA+TGG + chr7_1:44373130-44373149 Msa1020620:intron 45.0%
TGGCTTGAAACAATCACCTC+AGG + chr7_1:44373246-44373265 Msa1020620:intron 45.0%
TTGAAACAATCACCTCAGGC+AGG + chr7_1:44373250-44373269 Msa1020620:intron 45.0%
TGAAACAATCACCTCAGGCA+GGG + chr7_1:44373251-44373270 Msa1020620:intron 45.0%
CAGAATGATCTGCCTCACAA+TGG - chr7_1:44373318-44373337 None:intergenic 45.0%
TATGACAGTATCTGCCTTGG+TGG + chr7_1:44373486-44373505 Msa1020620:intron 45.0%
!! GGGCTAGTGATGGCTTTAAT+TGG + chr7_1:44374016-44374035 Msa1020620:intron 45.0%
TTCTCTCCTCAGTGTACTTG+TGG + chr7_1:44374039-44374058 Msa1020620:three_prime_UTR 45.0%
TGCTTACCACAAGTACACTG+AGG - chr7_1:44374048-44374067 None:intergenic 45.0%
! TTATGTGTGGCAGAGCATTC+AGG - chr7_1:44374404-44374423 None:intergenic 45.0%
TGATGTTTACTCCTGCAAGG+AGG + chr7_1:44374559-44374578 Msa1020620:intron 45.0%
GAAAAGGGCTACAAGTACAC+AGG + chr7_1:44374821-44374840 Msa1020620:three_prime_UTR 45.0%
TTCAGAAGAGGGTCCTTTAG+AGG + chr7_1:44374954-44374973 Msa1020620:intron 45.0%
TCAGAAGAGGGTCCTTTAGA+GGG + chr7_1:44374955-44374974 Msa1020620:intron 45.0%
TTGGTTTCACGGAAGTTACG+TGG + chr7_1:44375440-44375459 Msa1020620:intron 45.0%
TCAGTGTGGTAATTGCTGCA+TGG + chr7_1:44375673-44375692 Msa1020620:three_prime_UTR 45.0%
CAGTGTGGTAATTGCTGCAT+GGG + chr7_1:44375674-44375693 Msa1020620:three_prime_UTR 45.0%
AGTGTGGTAATTGCTGCATG+GGG + chr7_1:44375675-44375694 Msa1020620:three_prime_UTR 45.0%
! GGAATAGTTTGTGCTTCCCT+TGG + chr7_1:44375696-44375715 Msa1020620:three_prime_UTR 45.0%
AGTGGCCAGTTACTTATCCT+TGG + chr7_1:44375781-44375800 Msa1020620:three_prime_UTR 45.0%
TGGGACCAAGGATAAGTAAC+TGG - chr7_1:44375789-44375808 None:intergenic 45.0%
TGTAACACTCAATGGGACCA+AGG - chr7_1:44375801-44375820 None:intergenic 45.0%
TCTGCGCGATTAACAACATC+AGG + chr7_1:44375934-44375953 Msa1020620:three_prime_UTR 45.0%
CTGCGCGATTAACAACATCA+GGG + chr7_1:44375935-44375954 Msa1020620:three_prime_UTR 45.0%
! ACATTTGGTGGAGTACATGG+AGG - chr7_1:44376039-44376058 None:intergenic 45.0%
! ACGACATTTGGTGGAGTACA+TGG - chr7_1:44376042-44376061 None:intergenic 45.0%
CGGAATACACACACGACATT+TGG - chr7_1:44376054-44376073 None:intergenic 45.0%
!! AAATATTTAAGAATTTATAA+TGG + chr7_1:44371474-44371493 Msa1020620:intron 5.0%
!!! TTTAATTATGAAAATTTTAA+AGG + chr7_1:44374898-44374917 Msa1020620:intron 5.0%
CGACCCCACTTAGTGGAATA+AGG + chr7_1:44367842-44367861 Msa1020620:intron 50.0%
GGTGCAGCAGCAATTGTCAA+AGG - chr7_1:44367942-44367961 None:intergenic 50.0%
AAGGGTTCCCAACAACATGG+TGG + chr7_1:44368090-44368109 Msa1020620:CDS 50.0%
AGGGTTCCCAACAACATGGT+GGG + chr7_1:44368091-44368110 Msa1020620:CDS 50.0%
GCTTTCTCCCACCATGTTGT+TGG - chr7_1:44368101-44368120 None:intergenic 50.0%
TCTCTCATCTTGTAAGCCGG+TGG + chr7_1:44368317-44368336 Msa1020620:intron 50.0%
GCTAACTCAACTGCTACCAC+CGG - chr7_1:44368336-44368355 None:intergenic 50.0%
! CCAGCTTGCTTCACAGTATC+AGG - chr7_1:44368784-44368803 None:intergenic 50.0%
CCTGATACTGTGAAGCAAGC+TGG + chr7_1:44368781-44368800 Msa1020620:CDS 50.0%
ATACTGTGAAGCAAGCTGGG+TGG + chr7_1:44368785-44368804 Msa1020620:CDS 50.0%
TACTGTGAAGCAAGCTGGGT+GGG + chr7_1:44368786-44368805 Msa1020620:CDS 50.0%
! AACCTTGCTGGTCTGTTTCC+TGG + chr7_1:44369978-44369997 Msa1020620:CDS 50.0%
TTCCAGGAAACAGACCAGCA+AGG - chr7_1:44369983-44370002 None:intergenic 50.0%
! CCCCAATGCAAGTTTGTTCC+AGG - chr7_1:44369999-44370018 None:intergenic 50.0%
GGAACAAACTTGCATTGGGG+AGG + chr7_1:44369999-44370018 Msa1020620:CDS 50.0%
TGTGATGATTCTGCAGCTGG+AGG + chr7_1:44370251-44370270 Msa1020620:intron 50.0%
GTGATGATTCTGCAGCTGGA+GGG + chr7_1:44370252-44370271 Msa1020620:intron 50.0%
TGATGATTCTGCAGCTGGAG+GGG + chr7_1:44370253-44370272 Msa1020620:intron 50.0%
GTCGTGGTAACATGCATGTC+AGG - chr7_1:44370662-44370681 None:intergenic 50.0%
CCTCTACACTTCTTGCCAGT+GGG - chr7_1:44371150-44371169 None:intergenic 50.0%
TCCTCTACACTTCTTGCCAG+TGG - chr7_1:44371151-44371170 None:intergenic 50.0%
AGAGATGGTCAGCACTTAGC+AGG + chr7_1:44371361-44371380 Msa1020620:intron 50.0%
GAGATGGTCAGCACTTAGCA+GGG + chr7_1:44371362-44371381 Msa1020620:intron 50.0%
TTGGAATAGGAGGCTGTTCG+AGG - chr7_1:44371448-44371467 None:intergenic 50.0%
ACACACACACACACACCTGT+GGG - chr7_1:44371636-44371655 None:intergenic 50.0%
CCAACAGCCAAAGAAAAGCC+AGG - chr7_1:44371739-44371758 None:intergenic 50.0%
!! CCTGGCTTTTCTTTGGCTGT+TGG + chr7_1:44371736-44371755 Msa1020620:intron 50.0%
GGTCAAACAGAGGTCTCTCT+TGG - chr7_1:44371766-44371785 None:intergenic 50.0%
CAGTGTATGGTCACGATGGT+GGG - chr7_1:44371837-44371856 None:intergenic 50.0%
GTAGGCAAATCGGCAGTGTA+TGG - chr7_1:44371850-44371869 None:intergenic 50.0%
ACCAGAGGGATTTCGACAGT+AGG - chr7_1:44371868-44371887 None:intergenic 50.0%
ACGTTCAGACTGTGACCAGA+GGG - chr7_1:44371882-44371901 None:intergenic 50.0%
AACGTTCAGACTGTGACCAG+AGG - chr7_1:44371883-44371902 None:intergenic 50.0%
GGAAGGGGTTCCAATAGAAC+CGG - chr7_1:44371977-44371996 None:intergenic 50.0%
! CTCACGTTTGAGGTGTGTTC+TGG + chr7_1:44372008-44372027 Msa1020620:intron 50.0%
CCAAACCAACAGGTTTGAGG+CGG - chr7_1:44372080-44372099 None:intergenic 50.0%
GCGACCCAGACTTCGTTATA+TGG + chr7_1:44372104-44372123 Msa1020620:intron 50.0%
CGGAAATGTACCATCAGCTG+AGG - chr7_1:44372437-44372456 None:intergenic 50.0%
TTCTTCCACCGTAGGAATGG+TGG - chr7_1:44372725-44372744 None:intergenic 50.0%
ATCGCCTATGAGCGAAGGTT+TGG + chr7_1:44372922-44372941 Msa1020620:intron 50.0%
GGAAAATGAGCAGACACAGG+TGG - chr7_1:44372991-44373010 None:intergenic 50.0%
CCTCCATCCTGAAAAGCCTT+TGG - chr7_1:44373136-44373155 None:intergenic 50.0%
!! CCAAAGGCTTTTCAGGATGG+AGG + chr7_1:44373133-44373152 Msa1020620:intron 50.0%
GATGGGATAGCTCCCAAGTA+CGG - chr7_1:44373197-44373216 None:intergenic 50.0%
CACTGGCATTACGTGTCAGA+TGG + chr7_1:44373958-44373977 Msa1020620:intron 50.0%
AAATCATGGAGCCTCCTTGC+AGG - chr7_1:44374573-44374592 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_1:44367836-44367855 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_1:44367835-44367854 Msa1020620:intron 55.0%
TGTGGCCACAATTGTAGCCG+TGG + chr7_1:44368590-44368609 Msa1020620:intron 55.0%
TCTGCAGCTGGAGGGGTTAT+TGG + chr7_1:44370260-44370279 Msa1020620:intron 55.0%
!! ATATGGAGGCGTTGGAGCCA+TGG + chr7_1:44370785-44370804 Msa1020620:three_prime_UTR 55.0%
!! TATGGAGGCGTTGGAGCCAT+GGG + chr7_1:44370786-44370805 Msa1020620:three_prime_UTR 55.0%
! CCCACTGGCAAGAAGTGTAG+AGG + chr7_1:44371147-44371166 Msa1020620:three_prime_UTR 55.0%
!! TCGAGGTGTCGAGCTTGATG+TGG - chr7_1:44371431-44371450 None:intergenic 55.0%
GGATTGATTAGGAGGCCCAC+AGG + chr7_1:44371618-44371637 Msa1020620:intron 55.0%
CACACACACACACACACCTG+TGG - chr7_1:44371637-44371656 None:intergenic 55.0%
GAGAGCCAGGTTCAAAACCC+TGG + chr7_1:44371718-44371737 Msa1020620:intron 55.0%
!! TTTGTTGCTGATGGCGGCAG+GGG - chr7_1:44371805-44371824 None:intergenic 55.0%
!! CTTTGTTGCTGATGGCGGCA+GGG - chr7_1:44371806-44371825 None:intergenic 55.0%
!! TCTTTGTTGCTGATGGCGGC+AGG - chr7_1:44371807-44371826 None:intergenic 55.0%
GCAGTGTATGGTCACGATGG+TGG - chr7_1:44371838-44371857 None:intergenic 55.0%
TCGGCAGTGTATGGTCACGA+TGG - chr7_1:44371841-44371860 None:intergenic 55.0%
GCCTACTGTCGAAATCCCTC+TGG + chr7_1:44371864-44371883 Msa1020620:intron 55.0%
TTGGAACCCCTTCCAGCTTG+TGG + chr7_1:44371983-44372002 Msa1020620:intron 55.0%
TGGAACCCCTTCCAGCTTGT+GGG + chr7_1:44371984-44372003 Msa1020620:intron 55.0%
TGAGACCCACAAGCTGGAAG+GGG - chr7_1:44371992-44372011 None:intergenic 55.0%
GTGAGACCCACAAGCTGGAA+GGG - chr7_1:44371993-44372012 None:intergenic 55.0%
CAAACGTGAGACCCACAAGC+TGG - chr7_1:44371998-44372017 None:intergenic 55.0%
GCTTGTGGGTCTCACGTTTG+AGG + chr7_1:44371998-44372017 Msa1020620:intron 55.0%
! CCGCCTCAAACCTGTTGGTT+TGG + chr7_1:44372077-44372096 Msa1020620:intron 55.0%
GGTCGCATGACCAAACCAAC+AGG - chr7_1:44372090-44372109 None:intergenic 55.0%
GCTCCTTAGGGACCCTATGA+AGG - chr7_1:44372691-44372710 None:intergenic 55.0%
CATAGGGTCCCTAAGGAGCA+TGG + chr7_1:44372692-44372711 Msa1020620:intron 55.0%
TTGGCATCGCCTATGAGCGA+AGG + chr7_1:44372917-44372936 Msa1020620:intron 55.0%
!! AGGCTTTTCAGGATGGAGGC+AGG + chr7_1:44373137-44373156 Msa1020620:intron 55.0%
ACAATCACCTCAGGCAGGGT+TGG + chr7_1:44373255-44373274 Msa1020620:intron 55.0%
CAATCACCTCAGGCAGGGTT+GGG + chr7_1:44373256-44373275 Msa1020620:intron 55.0%
GTCGTGTCTGTGTCGGACAC+TGG + chr7_1:44368481-44368500 Msa1020620:intron 60.0%
GCGGTCCACGGCTACAATTG+TGG - chr7_1:44368598-44368617 None:intergenic 60.0%
GCAAGCTGGGTGGGTGAGTT+TGG + chr7_1:44368795-44368814 Msa1020620:CDS 60.0%
AGCTGGGTGGGTGAGTTTGG+TGG + chr7_1:44368798-44368817 Msa1020620:CDS 60.0%
!! CTGGAGGTTCAAGGAGCACC+AGG - chr7_1:44369409-44369428 None:intergenic 60.0%
!! AGGGGCTCTGGTGATGGATG+AGG - chr7_1:44371787-44371806 None:intergenic 60.0%
CGTGAGACCCACAAGCTGGA+AGG - chr7_1:44371994-44372013 None:intergenic 60.0%
CCTTTGCGGGCTCGACAGTT+GGG - chr7_1:44372174-44372193 None:intergenic 60.0%
ACCTTTGCGGGCTCGACAGT+TGG - chr7_1:44372175-44372194 None:intergenic 60.0%
AGCAGACACAGGTGGAGCAG+GGG - chr7_1:44372983-44373002 None:intergenic 60.0%
GAGCAGACACAGGTGGAGCA+GGG - chr7_1:44372984-44373003 None:intergenic 60.0%
TGAGCAGACACAGGTGGAGC+AGG - chr7_1:44372985-44373004 None:intergenic 60.0%
AATCCTCCCAACCCTGCCTG+AGG - chr7_1:44373265-44373284 None:intergenic 60.0%
GCTGCAGGTTGCTCTCAGTG+TGG + chr7_1:44375659-44375678 Msa1020620:intron 60.0%
GTGTGTCACGCTCCACCCTC+TGG + chr7_1:44371913-44371932 Msa1020620:intron 65.0%
CCCAACTGTCGAGCCCGCAA+AGG + chr7_1:44372171-44372190 Msa1020620:intron 65.0%
GGAGCAGGGGTGGAGACACT+TGG - chr7_1:44372970-44372989 None:intergenic 65.0%
AGACACAGGTGGAGCAGGGG+TGG - chr7_1:44372980-44372999 None:intergenic 65.0%
TCACCTCAGGCAGGGTTGGG+AGG + chr7_1:44373259-44373278 Msa1020620:intron 65.0%
! GGCGGCAGGGGCTCTGGTGA+TGG - chr7_1:44371793-44371812 None:intergenic 75.0%
!! GCTGATGGCGGCAGGGGCTC+TGG - chr7_1:44371799-44371818 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 44367008 44376159 44367008 ID=Msa1020620;Name=Msa1020620
chr7_1 mRNA 44367008 44376159 44367008 ID=Msa1020620-mRNA-1;Parent=Msa1020620;Name=Msa1020620-mRNA-1;_AED=0.27;_eAED=0.27;_QI=238|1|1|1|0.87|0.88|9|1376|367
chr7_1 exon 44367008 44367427 44367008 ID=Msa1020620-mRNA-1:exon:8561;Parent=Msa1020620-mRNA-1
chr7_1 exon 44367926 44368194 44367926 ID=Msa1020620-mRNA-1:exon:8562;Parent=Msa1020620-mRNA-1
chr7_1 exon 44368743 44368957 44368743 ID=Msa1020620-mRNA-1:exon:8563;Parent=Msa1020620-mRNA-1
chr7_1 exon 44369836 44369859 44369836 ID=Msa1020620-mRNA-1:exon:8564;Parent=Msa1020620-mRNA-1
chr7_1 exon 44369942 44370122 44369942 ID=Msa1020620-mRNA-1:exon:8565;Parent=Msa1020620-mRNA-1
chr7_1 exon 44370267 44371274 44370267 ID=Msa1020620-mRNA-1:exon:8566;Parent=Msa1020620-mRNA-1
chr7_1 exon 44374017 44374060 44374017 ID=Msa1020620-mRNA-1:exon:8567;Parent=Msa1020620-mRNA-1
chr7_1 exon 44374780 44374842 44374780 ID=Msa1020620-mRNA-1:exon:8568;Parent=Msa1020620-mRNA-1
chr7_1 exon 44375666 44376159 44375666 ID=Msa1020620-mRNA-1:exon:8569;Parent=Msa1020620-mRNA-1
chr7_1 five_prime_UTR 44367008 44367245 44367008 ID=Msa1020620-mRNA-1:five_prime_utr;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44367246 44367427 44367246 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44367926 44368194 44367926 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44368743 44368957 44368743 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44369836 44369859 44369836 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44369942 44370122 44369942 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 CDS 44370267 44370499 44370267 ID=Msa1020620-mRNA-1:cds;Parent=Msa1020620-mRNA-1
chr7_1 three_prime_UTR 44370500 44371274 44370500 ID=Msa1020620-mRNA-1:three_prime_utr;Parent=Msa1020620-mRNA-1
chr7_1 three_prime_UTR 44374017 44374060 44374017 ID=Msa1020620-mRNA-1:three_prime_utr;Parent=Msa1020620-mRNA-1
chr7_1 three_prime_UTR 44374780 44374842 44374780 ID=Msa1020620-mRNA-1:three_prime_utr;Parent=Msa1020620-mRNA-1
chr7_1 three_prime_UTR 44375666 44376159 44375666 ID=Msa1020620-mRNA-1:three_prime_utr;Parent=Msa1020620-mRNA-1
Gene Sequence

>Msa1020620

ATGGCCAACAACGATAAGAACAAAGAAAAAGAGAATGAATATTTTTTGGATGCAAACGAAGATGAAACCGACATTGAAGCTGTTAACTACGATAGTGACAGTAGCAATAATCATGGCAGTTATGATGACGATGATCAACAACCTGAATCTTTCACTTCTCAACAATGGCCTCAAACTTACAATGAGGCTATTGATCCTTTGACAATTGCTGCTGCACCAAATCTTGGATCAATTCTGAGAGGACCAAGTGTTCTTTATTCAAGTTTTGTGGGTTCATTTTCATCAAAGAGTTACTTAGAATTACATGATGGAAAGACATCTTTTCTATCTGGTAATCAAATTCAAGAAGGGTTCCCAACAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAGGAATTGCCTATTGGTTATGGATGTACCTTCACTCAAACTATATTTAATGGGATTAATATCATGGCTGGAGTTGGGCTACTATCTACACCTGATACTGTGAAGCAAGCTGGGTGGGTGAGTTTGGTGGTGATGCTTATTTTTGCAGTTGTATGCTGTTATACGGCAGAGCTTATGAGACATTGCTTTGAAAGCAGAGAAGGCATCATTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCAATCATTTTGTACATCGAACTATATTCATATTGTGTGGAATATATCATCATGGAAGGTGATAACCTTGCTGGTCTGTTTCCTGGAACAAACTTGCATTGGGGAGGTTTAAATATGGATGGCAAGCACTTATTTGCAATTTTGGCTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTATTGGTACAACTTTGGTTGCTTCTTGTGTGTTTATTGTTGGGACAAGAAAAGATGTTGGATTCCATCACACTGGTCAATTTGTGAACTGGAGTGGCCTTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTCCCCAATATTTATCAGTCTATGGCTAACAAAAAAGATTTTACCAAGGCAATAATCATATGGTATGCTACATAA
Protein sequence

>Msa1020620

MANNDKNKEKENEYFLDANEDETDIEAVNYDSDSSNNHGSYDDDDQQPESFTSQQWPQTYNEAIDPLTIAAAPNLGSILRGPSVLYSSFVGSFSSKSYLELHDGKTSFLSGNQIQEGFPTTWWEKASIQMQIPEELPIGYGCTFTQTIFNGINIMAGVGLLSTPDTVKQAGWVSLVVMLIFAVVCCYTAELMRHCFESREGIISYPDIGEAAFGKYGRVIISIILYIELYSYCVEYIIMEGDNLAGLFPGTNLHWGGLNMDGKHLFAILAALIILPTVWLKDLRIISYLSAGGVIGTTLVASCVFIVGTRKDVGFHHTGQFVNWSGLPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAIIIWYAT*