Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434710 | XP_024629046.1 | 95.238 | 147 | 6 | 1 | 1 | 147 | 1 | 146 | 6.03e-77 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434710 | sp|Q9LVJ0|UVB31_ARATH | 54.945 | 91 | 39 | 1 | 57 | 147 | 61 | 149 | 1.26e-20 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434710 | A0A396GSD0 | 95.238 | 147 | 6 | 1 | 1 | 147 | 1 | 146 | 2.88e-77 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa1434710 | 0.820608 | 6.269622e-53 | -8.615850e-47 |
| Msa0007810 | Msa1434710 | 0.846311 | 2.352238e-59 | -8.615850e-47 |
| Msa0032890 | Msa1434710 | 0.821361 | 4.206155e-53 | -8.615850e-47 |
| Msa0032930 | Msa1434710 | 0.825742 | 3.970185e-54 | -8.615850e-47 |
| Msa0034700 | Msa1434710 | 0.884372 | 2.029113e-71 | -8.615850e-47 |
| Msa0044530 | Msa1434710 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0053260 | Msa1434710 | 0.848495 | 5.910894e-60 | -8.615850e-47 |
| Msa0056220 | Msa1434710 | 0.854070 | 1.571796e-61 | -8.615850e-47 |
| Msa0056230 | Msa1434710 | 0.851762 | 7.185250e-61 | -8.615850e-47 |
| Msa0064240 | Msa1434710 | 0.813935 | 1.989437e-51 | -8.615850e-47 |
| Msa0066890 | Msa1434710 | 0.832263 | 1.044477e-55 | -8.615850e-47 |
| Msa0077570 | Msa1434710 | 0.870431 | 1.467135e-66 | -8.615850e-47 |
| Msa0080060 | Msa1434710 | 0.802435 | 5.617982e-49 | -8.615850e-47 |
| Msa0080820 | Msa1434710 | -0.802170 | 6.371492e-49 | -8.615850e-47 |
| Msa0091240 | Msa1434710 | 0.805661 | 1.198701e-49 | -8.615850e-47 |
| Msa0095810 | Msa1434710 | 0.826685 | 2.368868e-54 | -8.615850e-47 |
| Msa0098500 | Msa1434710 | 0.831101 | 2.020683e-55 | -8.615850e-47 |
| Msa0098750 | Msa1434710 | 0.840334 | 9.259155e-58 | -8.615850e-47 |
| Msa0108500 | Msa1434710 | 0.804021 | 2.637620e-49 | -8.615850e-47 |
| Msa0111110 | Msa1434710 | 0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0114600 | Msa1434710 | -0.820195 | 7.798254e-53 | -8.615850e-47 |
| Msa1351380 | Msa1434710 | 0.810202 | 1.295800e-50 | -8.615850e-47 |
| Msa1366140 | Msa1434710 | 0.860797 | 1.607375e-63 | -8.615850e-47 |
| Msa1367260 | Msa1434710 | 0.895553 | 8.589549e-76 | -8.615850e-47 |
| Msa1381870 | Msa1434710 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa1386180 | Msa1434710 | 0.837330 | 5.540898e-57 | -8.615850e-47 |
| Msa1387100 | Msa1434710 | 0.821573 | 3.758364e-53 | -8.615850e-47 |
| Msa1387450 | Msa1434710 | 0.877513 | 5.918187e-69 | -8.615850e-47 |
| Msa1388720 | Msa1434710 | 0.806406 | 8.353873e-50 | -8.615850e-47 |
| Msa1389670 | Msa1434710 | 0.824812 | 6.589434e-54 | -8.615850e-47 |
| Msa1392650 | Msa1434710 | 0.830427 | 2.955434e-55 | -8.615850e-47 |
| Msa1402340 | Msa1434710 | 0.834763 | 2.483250e-56 | -8.615850e-47 |
| Msa1412450 | Msa1434710 | 0.832909 | 7.221970e-56 | -8.615850e-47 |
| Msa1412800 | Msa1434710 | 0.826637 | 2.431988e-54 | -8.615850e-47 |
| Msa1421520 | Msa1434710 | 0.837189 | 6.019195e-57 | -8.615850e-47 |
| Msa1422820 | Msa1434710 | 0.853874 | 1.790509e-61 | -8.615850e-47 |
| Msa1427900 | Msa1434710 | 0.825052 | 5.783123e-54 | -8.615850e-47 |
| Msa1428230 | Msa1434710 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa1432730 | Msa1434710 | 0.801263 | 9.776353e-49 | -8.615850e-47 |
| Msa0603600 | Msa1434710 | 0.810074 | 1.381261e-50 | -8.615850e-47 |
| Msa0606480 | Msa1434710 | 0.809654 | 1.700639e-50 | -8.615850e-47 |
| Msa0619320 | Msa1434710 | 0.853234 | 2.733819e-61 | -8.615850e-47 |
| Msa0620900 | Msa1434710 | -0.834496 | 2.898329e-56 | -8.615850e-47 |
| Msa0644890 | Msa1434710 | 0.803796 | 2.937960e-49 | -8.615850e-47 |
| Msa0654400 | Msa1434710 | 0.802770 | 4.791935e-49 | -8.615850e-47 |
| Msa0654500 | Msa1434710 | 0.821381 | 4.161077e-53 | -8.615850e-47 |
| Msa0654570 | Msa1434710 | 0.818010 | 2.450230e-52 | -8.615850e-47 |
| Msa0664270 | Msa1434710 | 0.811658 | 6.270468e-51 | -8.615850e-47 |
| Msa0685390 | Msa1434710 | 0.877757 | 4.863498e-69 | -8.615850e-47 |
| Msa0708840 | Msa1434710 | 0.812817 | 3.503238e-51 | -8.615850e-47 |
| Msa0714230 | Msa1434710 | 0.858157 | 9.988727e-63 | -8.615850e-47 |
| Msa0721330 | Msa1434710 | 0.803201 | 3.903473e-49 | -8.615850e-47 |
| Msa0739200 | Msa1434710 | 0.833016 | 6.792637e-56 | -8.615850e-47 |
| Msa0745630 | Msa1434710 | 0.829705 | 4.432720e-55 | -8.615850e-47 |
| Msa0766860 | Msa1434710 | -0.800834 | 1.196366e-48 | -8.615850e-47 |
| Msa0770540 | Msa1434710 | 0.805135 | 1.545204e-49 | -8.615850e-47 |
| Msa0786600 | Msa1434710 | 0.825335 | 4.958816e-54 | -8.615850e-47 |
| Msa0792840 | Msa1434710 | 0.803124 | 4.048695e-49 | -8.615850e-47 |
| Msa0819620 | Msa1434710 | 0.824296 | 8.718152e-54 | -8.615850e-47 |
| Msa0822680 | Msa1434710 | 0.837086 | 6.395395e-57 | -8.615850e-47 |
| Msa0823480 | Msa1434710 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0129930 | Msa1434710 | 0.873299 | 1.637907e-67 | -8.615850e-47 |
| Msa0133140 | Msa1434710 | 0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0152190 | Msa1434710 | 0.811439 | 6.996914e-51 | -8.615850e-47 |
| Msa0154880 | Msa1434710 | 0.828532 | 8.529964e-55 | -8.615850e-47 |
| Msa0154890 | Msa1434710 | 0.810671 | 1.026563e-50 | -8.615850e-47 |
| Msa0173380 | Msa1434710 | -0.802277 | 6.055646e-49 | -8.615850e-47 |
| Msa0173580 | Msa1434710 | 0.809018 | 2.328151e-50 | -8.615850e-47 |
| Msa0180520 | Msa1434710 | 0.803781 | 2.958800e-49 | -8.615850e-47 |
| Msa0183310 | Msa1434710 | 0.828815 | 7.290322e-55 | -8.615850e-47 |
| Msa0221180 | Msa1434710 | -0.826385 | 2.792621e-54 | -8.615850e-47 |
| Msa0223090 | Msa1434710 | -0.802902 | 4.500566e-49 | -8.615850e-47 |
| Msa0223370 | Msa1434710 | -0.803510 | 3.368798e-49 | -8.615850e-47 |
| Msa0223500 | Msa1434710 | 0.806163 | 9.398648e-50 | -8.615850e-47 |
| Msa0226900 | Msa1434710 | -0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0229750 | Msa1434710 | 0.845630 | 3.603425e-59 | -8.615850e-47 |
| Msa1255880 | Msa1434710 | 0.814556 | 1.450405e-51 | -8.615850e-47 |
| Msa1264300 | Msa1434710 | 0.800515 | 1.390323e-48 | -8.615850e-47 |
| Msa1266120 | Msa1434710 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa1279200 | Msa1434710 | 0.807428 | 5.079281e-50 | -8.615850e-47 |
| Msa1287100 | Msa1434710 | 0.802505 | 5.435651e-49 | -8.615850e-47 |
| Msa1290090 | Msa1434710 | 0.832204 | 1.080304e-55 | -8.615850e-47 |
| Msa1296270 | Msa1434710 | 0.807138 | 5.851187e-50 | -8.615850e-47 |
| Msa1298980 | Msa1434710 | 0.804923 | 1.710899e-49 | -8.615850e-47 |
| Msa1305970 | Msa1434710 | 0.819081 | 1.400366e-52 | -8.615850e-47 |
| Msa1328680 | Msa1434710 | 0.820640 | 6.163183e-53 | -8.615850e-47 |
| Msa1333900 | Msa1434710 | 0.801894 | 7.260145e-49 | -8.615850e-47 |
| Msa1334350 | Msa1434710 | 0.836538 | 8.826958e-57 | -8.615850e-47 |
| Msa0369580 | Msa1434710 | 0.864042 | 1.616411e-64 | -8.615850e-47 |
| Msa0371350 | Msa1434710 | 0.857106 | 2.045468e-62 | -8.615850e-47 |
| Msa0372100 | Msa1434710 | -0.800298 | 1.538995e-48 | -8.615850e-47 |
| Msa0375930 | Msa1434710 | 0.868293 | 7.273640e-66 | -8.615850e-47 |
| Msa0387740 | Msa1434710 | 0.830413 | 2.978576e-55 | -8.615850e-47 |
| Msa0388750 | Msa1434710 | -0.842807 | 2.063621e-58 | -8.615850e-47 |
| Msa0391160 | Msa1434710 | 0.811610 | 6.422230e-51 | -8.615850e-47 |
| Msa0396640 | Msa1434710 | 0.840152 | 1.032613e-57 | -8.615850e-47 |
| Msa0403290 | Msa1434710 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0412580 | Msa1434710 | 0.802231 | 6.187583e-49 | -8.615850e-47 |
| Msa0417000 | Msa1434710 | 0.816838 | 4.497591e-52 | -8.615850e-47 |
| Msa0419420 | Msa1434710 | 0.846833 | 1.693664e-59 | -8.615850e-47 |
| Msa0424570 | Msa1434710 | 0.866072 | 3.723869e-65 | -8.615850e-47 |
| Msa0424940 | Msa1434710 | 0.828041 | 1.120450e-54 | -8.615850e-47 |
| Msa0426680 | Msa1434710 | 0.801942 | 7.096774e-49 | -8.615850e-47 |
| Msa0438680 | Msa1434710 | 0.838349 | 3.032295e-57 | -8.615850e-47 |
| Msa0444170 | Msa1434710 | 0.845290 | 4.454781e-59 | -8.615850e-47 |
| Msa0449880 | Msa1434710 | 0.822268 | 2.594250e-53 | -8.615850e-47 |
| Msa0463820 | Msa1434710 | 0.869498 | 2.961064e-66 | -8.615850e-47 |
| Msa0472300 | Msa1434710 | 0.824862 | 6.411589e-54 | -8.615850e-47 |
| Msa0474670 | Msa1434710 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0983680 | Msa1434710 | 0.801616 | 8.279018e-49 | -8.615850e-47 |
| Msa1017610 | Msa1434710 | 0.827993 | 1.151173e-54 | -8.615850e-47 |
| Msa1019040 | Msa1434710 | 0.824511 | 7.760300e-54 | -8.615850e-47 |
| Msa1020620 | Msa1434710 | -0.836469 | 9.187101e-57 | -8.615850e-47 |
| Msa1025200 | Msa1434710 | -0.806094 | 9.719375e-50 | -8.615850e-47 |
| Msa1037450 | Msa1434710 | 0.863621 | 2.184446e-64 | -8.615850e-47 |
| Msa1039150 | Msa1434710 | 0.805575 | 1.249352e-49 | -8.615850e-47 |
| Msa1043660 | Msa1434710 | -0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa1057940 | Msa1434710 | 0.823955 | 1.048276e-53 | -8.615850e-47 |
| Msa1064450 | Msa1434710 | 0.839248 | 1.774972e-57 | -8.615850e-47 |
| Msa1065090 | Msa1434710 | 0.801253 | 9.823717e-49 | -8.615850e-47 |
| Msa1073050 | Msa1434710 | -0.803893 | 2.804942e-49 | -8.615850e-47 |
| Msa1078280 | Msa1434710 | 0.861591 | 9.214440e-64 | -8.615850e-47 |
| Msa1078590 | Msa1434710 | 0.831068 | 2.058447e-55 | -8.615850e-47 |
| Msa1078760 | Msa1434710 | 0.827456 | 1.549263e-54 | -8.615850e-47 |
| Msa1085570 | Msa1434710 | 0.966283 | 1.027850e-125 | -8.615850e-47 |
| Msa1101610 | Msa1434710 | 0.816900 | 4.356417e-52 | -8.615850e-47 |
| Msa1104020 | Msa1434710 | 0.812946 | 3.282877e-51 | -8.615850e-47 |
| Msa0262750 | Msa1434710 | -0.829633 | 4.614609e-55 | -8.615850e-47 |
| Msa0264580 | Msa1434710 | 0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa0267450 | Msa1434710 | 0.802301 | 5.988057e-49 | -8.615850e-47 |
| Msa0267510 | Msa1434710 | 0.800968 | 1.123549e-48 | -8.615850e-47 |
| Msa0269220 | Msa1434710 | 0.850584 | 1.544706e-60 | -8.615850e-47 |
| Msa0293060 | Msa1434710 | 0.814861 | 1.241693e-51 | -8.615850e-47 |
| Msa0293070 | Msa1434710 | 0.844409 | 7.699301e-59 | -8.615850e-47 |
| Msa0295030 | Msa1434710 | 0.810171 | 1.316212e-50 | -8.615850e-47 |
| Msa0297180 | Msa1434710 | 0.814757 | 1.309702e-51 | -8.615850e-47 |
| Msa0300130 | Msa1434710 | 0.801256 | 9.808701e-49 | -8.615850e-47 |
| Msa0300470 | Msa1434710 | -0.859011 | 5.553154e-63 | -8.615850e-47 |
| Msa0337970 | Msa1434710 | -0.856788 | 2.537827e-62 | -8.615850e-47 |
| Msa0339880 | Msa1434710 | -0.800229 | 1.589299e-48 | -8.615850e-47 |
| Msa0339970 | Msa1434710 | 0.808549 | 2.933097e-50 | -8.615850e-47 |
| Msa0350070 | Msa1434710 | 0.832108 | 1.140823e-55 | -8.615850e-47 |
| Msa0357050 | Msa1434710 | 0.859829 | 3.155260e-63 | -8.615850e-47 |
| Msa1113820 | Msa1434710 | -0.810081 | 1.376529e-50 | -8.615850e-47 |
| Msa1123490 | Msa1434710 | 0.873289 | 1.650406e-67 | -8.615850e-47 |
| Msa1128110 | Msa1434710 | 0.815532 | 8.808095e-52 | -8.615850e-47 |
| Msa1129120 | Msa1434710 | 0.809891 | 1.512110e-50 | -8.615850e-47 |
| Msa1130860 | Msa1434710 | 0.874729 | 5.376943e-68 | -8.615850e-47 |
| Msa1130920 | Msa1434710 | 0.872223 | 3.750623e-67 | -8.615850e-47 |
| Msa1136970 | Msa1434710 | 0.800676 | 1.288979e-48 | -8.615850e-47 |
| Msa1153250 | Msa1434710 | 0.814264 | 1.683042e-51 | -8.615850e-47 |
| Msa1154630 | Msa1434710 | -0.809915 | 1.494598e-50 | -8.615850e-47 |
| Msa1169590 | Msa1434710 | 0.847269 | 1.286447e-59 | -8.615850e-47 |
| Msa1169780 | Msa1434710 | 0.845594 | 3.683782e-59 | -8.615850e-47 |
| Msa1191030 | Msa1434710 | 0.818032 | 2.421490e-52 | -8.615850e-47 |
| Msa1194480 | Msa1434710 | 0.819333 | 1.226925e-52 | -8.615850e-47 |
| Msa1199540 | Msa1434710 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa1203510 | Msa1434710 | 0.811285 | 7.556306e-51 | -8.615850e-47 |
| Msa1205120 | Msa1434710 | -0.812438 | 4.239173e-51 | -8.615850e-47 |
| Msa1221780 | Msa1434710 | 0.806396 | 8.394152e-50 | -8.615850e-47 |
| Msa0491730 | Msa1434710 | 0.843961 | 1.015368e-58 | -8.615850e-47 |
| Msa0503040 | Msa1434710 | 0.832214 | 1.074121e-55 | -8.615850e-47 |
| Msa0516000 | Msa1434710 | 0.872768 | 2.466995e-67 | -8.615850e-47 |
| Msa0516340 | Msa1434710 | 0.800827 | 1.200612e-48 | -8.615850e-47 |
| Msa0524080 | Msa1434710 | 0.803536 | 3.326366e-49 | -8.615850e-47 |
| Msa0525180 | Msa1434710 | 0.813045 | 3.122217e-51 | -8.615850e-47 |
| Msa0541940 | Msa1434710 | -0.804358 | 2.244589e-49 | -8.615850e-47 |
| Msa0544390 | Msa1434710 | 0.804583 | 2.014776e-49 | -8.615850e-47 |
| Msa0550990 | Msa1434710 | 0.803564 | 3.282866e-49 | -8.615850e-47 |
| Msa0551040 | Msa1434710 | 0.801950 | 7.068485e-49 | -8.615850e-47 |
| Msa0554770 | Msa1434710 | 0.817167 | 3.794619e-52 | -8.615850e-47 |
| Msa0559640 | Msa1434710 | 0.826613 | 2.464169e-54 | -8.615850e-47 |
| Msa0572270 | Msa1434710 | 0.832228 | 1.065677e-55 | -8.615850e-47 |
| Msa0575960 | Msa1434710 | 0.949335 | 1.568469e-107 | -8.615850e-47 |
| Msa0582590 | Msa1434710 | 0.800589 | 1.342471e-48 | -8.615850e-47 |
| Msa0859830 | Msa1434710 | 0.818942 | 1.506474e-52 | -8.615850e-47 |
| Msa0866510 | Msa1434710 | 0.815200 | 1.044298e-51 | -8.615850e-47 |
| Msa0925930 | Msa1434710 | -0.810415 | 1.166138e-50 | -8.615850e-47 |
| Msa0941150 | Msa1434710 | 0.820640 | 6.163534e-53 | -8.615850e-47 |
| Msa0945520 | Msa1434710 | 0.803204 | 3.897445e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434710 | MtrunA17_Chr8g0393251 | 95.238 | 147 | 6 | 1 | 1 | 147 | 1 | 146 | 5.54e-81 | 244 |
| Msa1434710 | MtrunA17_Chr6g0479321 | 46.218 | 119 | 47 | 5 | 30 | 147 | 41 | 143 | 5.53e-17 | 76.3 |
| Msa1434710 | MtrunA17_Chr5g0410131 | 47.619 | 84 | 30 | 3 | 64 | 145 | 62 | 133 | 8.83e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434710 | AT1G48450.3 | 56.471 | 85 | 30 | 2 | 63 | 147 | 63 | 140 | 8.51e-24 | 94.7 |
| Msa1434710 | AT1G48450.2 | 56.471 | 85 | 30 | 2 | 63 | 147 | 63 | 140 | 1.03e-23 | 94.7 |
| Msa1434710 | AT1G48450.1 | 56.471 | 85 | 30 | 2 | 63 | 147 | 63 | 140 | 1.74e-23 | 94.7 |
| Msa1434710 | AT3G17800.2 | 54.945 | 91 | 39 | 1 | 57 | 147 | 67 | 155 | 1.17e-21 | 89.7 |
| Msa1434710 | AT3G17800.1 | 54.945 | 91 | 39 | 1 | 57 | 147 | 61 | 149 | 1.28e-21 | 89.7 |
Find 59 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCTCCTTCTAATAATA+AGG | 0.195362 | tig0027586:+58392 | Msa1434710:CDS |
| TTTATATTAAATTAAAATAT+TGG | 0.208543 | tig0027586:+58153 | Msa1434710:five_prime_UTR |
| TTCCTAGTCGTACAATAAAA+TGG | 0.229512 | tig0027586:+58077 | Msa1434710:five_prime_UTR |
| GATGGATTCTTGTTTGGATT+TGG | 0.269044 | tig0027586:-58248 | None:intergenic |
| GATAGTACCTTATTATTAGA+AGG | 0.339689 | tig0027586:-58399 | None:intergenic |
| GAAATGGATGGATTCTTGTT+TGG | 0.341565 | tig0027586:-58254 | None:intergenic |
| GCAATCTTATGAGAAGAGTC+TGG | 0.407257 | tig0027586:-58820 | None:intergenic |
| AATAAATAGATATGAATAGT+AGG | 0.427310 | tig0027586:+58115 | Msa1434710:five_prime_UTR |
| TAATATAAATAAATAATTCT+CGG | 0.427467 | tig0027586:-58139 | None:intergenic |
| CGAGCAGATGAACGAAGAAA+TGG | 0.431902 | tig0027586:-58270 | None:intergenic |
| ATGTTGTAGGAGAAGGATCT+TGG | 0.432474 | tig0027586:-58981 | None:intergenic |
| AATATAAATAAATAATTCTC+GGG | 0.437419 | tig0027586:-58138 | None:intergenic |
| CCACCGCAGCAGGCACAAGA+TGG | 0.439006 | tig0027586:-58903 | None:intergenic |
| AGTTGCTGGTCCACCGCAGC+AGG | 0.446973 | tig0027586:-58913 | None:intergenic |
| GTGAAGAAGGCGGCAGGATC+CGG | 0.448164 | tig0027586:-58370 | None:intergenic |
| CCATCTTGTGCCTGCTGCGG+TGG | 0.450747 | tig0027586:+58886 | Msa1434710:CDS |
| ATTCTTGTTTGGATTTGGAT+TGG | 0.458363 | tig0027586:-58243 | None:intergenic |
| TCATGCTTATGCCTAGGGAT+GGG | 0.466457 | tig0027586:-58694 | None:intergenic |
| CCGTCTTCTTCAATTACAAC+CGG | 0.472072 | tig0027586:+58351 | Msa1434710:CDS |
| ATTGGAGCTGGAGAAGTTGC+TGG | 0.477347 | tig0027586:-58927 | None:intergenic |
| TAGAAGGAGGAAAGTGAAGA+AGG | 0.482490 | tig0027586:-58383 | None:intergenic |
| CATGCTTATGCCTAGGGATG+GGG | 0.483080 | tig0027586:-58693 | None:intergenic |
| TATTAAATTAAAATATTGGA+GGG | 0.487155 | tig0027586:+58157 | Msa1434710:five_prime_UTR |
| CACCGCAGCAGGCACAAGAT+GGG | 0.488056 | tig0027586:-58902 | None:intergenic |
| TGGGTCTGGCGAGGAGGAAG+AGG | 0.490825 | tig0027586:-58800 | None:intergenic |
| CTCATGCTTATGCCTAGGGA+TGG | 0.491888 | tig0027586:-58695 | None:intergenic |
| TTATGAGAAGAGTCTGGGTC+TGG | 0.513057 | tig0027586:-58814 | None:intergenic |
| GTCTCTCATGCTTATGCCTA+GGG | 0.517855 | tig0027586:-58699 | None:intergenic |
| GAGCAGCATCACGATCAGAT+TGG | 0.523258 | tig0027586:-58945 | None:intergenic |
| TGAGAAAGAAACTGACCGAT+TGG | 0.524356 | tig0027586:-58862 | None:intergenic |
| CTTCAGTTTCAGTCTCCAAT+CGG | 0.525591 | tig0027586:+58830 | Msa1434710:CDS |
| AGGAAAGTGAAGAAGGCGGC+AGG | 0.526126 | tig0027586:-58376 | None:intergenic |
| ACCGCAGCAGGCACAAGATG+GGG | 0.529440 | tig0027586:-58901 | None:intergenic |
| CATCACGATCAGATTGGAGC+TGG | 0.529818 | tig0027586:-58939 | None:intergenic |
| ATATTAAATTAAAATATTGG+AGG | 0.531207 | tig0027586:+58156 | Msa1434710:five_prime_UTR |
| AGTCTCTCATGCTTATGCCT+AGG | 0.540729 | tig0027586:-58700 | None:intergenic |
| GCACTTCCGTCCCCATCCCT+AGG | 0.541488 | tig0027586:+58666 | Msa1434710:CDS |
| CTGTGGCTGCCACGTCCATA+CGG | 0.555378 | tig0027586:-58308 | None:intergenic |
| CAATCTTATGAGAAGAGTCT+GGG | 0.567804 | tig0027586:-58819 | None:intergenic |
| AAGCATGAGAGACTCTCTGT+TGG | 0.570763 | tig0027586:+58692 | Msa1434710:CDS |
| CTAACCTAGCCGTATGGACG+TGG | 0.574142 | tig0027586:+58299 | Msa1434710:exon |
| TCGGTGGATGTTGTAGGAGA+AGG | 0.576997 | tig0027586:-58988 | None:intergenic |
| TGATAAGAAGAGGACGGCTG+TGG | 0.580594 | tig0027586:-58325 | None:intergenic |
| ATTAAATTAAAATATTGGAG+GGG | 0.588881 | tig0027586:+58158 | Msa1434710:five_prime_UTR |
| AGAGTCTGGGTCTGGCGAGG+AGG | 0.592281 | tig0027586:-58806 | None:intergenic |
| TCTAGTCTAACCTAGCCGTA+TGG | 0.592574 | tig0027586:+58293 | Msa1434710:exon |
| AGTACCTTATTATTAGAAGG+AGG | 0.610361 | tig0027586:-58396 | None:intergenic |
| CCGCAGCAGGCACAAGATGG+GGG | 0.617352 | tig0027586:-58900 | None:intergenic |
| AAGACGGCGGTGATAAGAAG+AGG | 0.618730 | tig0027586:-58335 | None:intergenic |
| AGAAGAGTCTGGGTCTGGCG+AGG | 0.623678 | tig0027586:-58809 | None:intergenic |
| GCTGCCACGTCCATACGGCT+AGG | 0.625385 | tig0027586:-58303 | None:intergenic |
| ATTGGAGACTGAAACTGAAG+AGG | 0.632400 | tig0027586:-58844 | None:intergenic |
| CCGGTTGTAATTGAAGAAGA+CGG | 0.652339 | tig0027586:-58351 | None:intergenic |
| CTAGTCGTACAATAAAATGG+AGG | 0.659838 | tig0027586:+58080 | Msa1434710:five_prime_UTR |
| CAGATGAACGAAGAAATGGA+TGG | 0.660221 | tig0027586:-58266 | None:intergenic |
| CTTATGCCTAGGGATGGGGA+CGG | 0.676237 | tig0027586:-58689 | None:intergenic |
| CGGCGGTGATAAGAAGAGGA+CGG | 0.676881 | tig0027586:-58331 | None:intergenic |
| AAGGAGGAAAGTGAAGAAGG+CGG | 0.701835 | tig0027586:-58380 | None:intergenic |
| GTTGTAATTGAAGAAGACGG+CGG | 0.772972 | tig0027586:-58348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATTAAATTAAAATAT+TGG | + | tig0027586:58153-58172 | Msa1434710:five_prime_UTR | 0.0% |
| !! | TTTATATTAAATTAAAATAT+TGG | + | tig0027586:58153-58172 | Msa1434710:five_prime_UTR | 0.0% |
| !! | AATATAAATAAATAATTCTC+GGG | - | tig0027586:58141-58160 | None:intergenic | 10.0% |
| !! | ATATTAAATTAAAATATTGG+AGG | + | tig0027586:58156-58175 | Msa1434710:five_prime_UTR | 10.0% |
| !! | TATTAAATTAAAATATTGGA+GGG | + | tig0027586:58157-58176 | Msa1434710:five_prime_UTR | 10.0% |
| !! | AATATAAATAAATAATTCTC+GGG | - | tig0027586:58141-58160 | None:intergenic | 10.0% |
| !! | ATATTAAATTAAAATATTGG+AGG | + | tig0027586:58156-58175 | Msa1434710:five_prime_UTR | 10.0% |
| !! | TATTAAATTAAAATATTGGA+GGG | + | tig0027586:58157-58176 | Msa1434710:five_prime_UTR | 10.0% |
| !! | AATAAATAGATATGAATAGT+AGG | + | tig0027586:58115-58134 | Msa1434710:five_prime_UTR | 15.0% |
| !! | ATTAAATTAAAATATTGGAG+GGG | + | tig0027586:58158-58177 | Msa1434710:five_prime_UTR | 15.0% |
| !! | AATAAATAGATATGAATAGT+AGG | + | tig0027586:58115-58134 | Msa1434710:five_prime_UTR | 15.0% |
| !! | ATTAAATTAAAATATTGGAG+GGG | + | tig0027586:58158-58177 | Msa1434710:five_prime_UTR | 15.0% |
| !! | AAATTGCAAGATATTATACA+GGG | - | tig0027586:58582-58601 | None:intergenic | 20.0% |
| !! | TAAATTGCAAGATATTATAC+AGG | - | tig0027586:58583-58602 | None:intergenic | 20.0% |
| !! | AAATTGCAAGATATTATACA+GGG | - | tig0027586:58582-58601 | None:intergenic | 20.0% |
| !! | TAAATTGCAAGATATTATAC+AGG | - | tig0027586:58583-58602 | None:intergenic | 20.0% |
| !! | TTTTTACTTTACAAGCGTAA+CGG | - | tig0027586:58209-58228 | None:intergenic | 25.0% |
| ! | GATAGTACCTTATTATTAGA+AGG | - | tig0027586:58402-58421 | None:intergenic | 25.0% |
| ! | TCATATATTCTGTTTGTTTG+TGG | - | tig0027586:58615-58634 | None:intergenic | 25.0% |
| !! | TTTTTACTTTACAAGCGTAA+CGG | - | tig0027586:58209-58228 | None:intergenic | 25.0% |
| ! | GATAGTACCTTATTATTAGA+AGG | - | tig0027586:58402-58421 | None:intergenic | 25.0% |
| ! | TCATATATTCTGTTTGTTTG+TGG | - | tig0027586:58615-58634 | None:intergenic | 25.0% |
| TTCCTAGTCGTACAATAAAA+TGG | + | tig0027586:58077-58096 | Msa1434710:five_prime_UTR | 30.0% | |
| ! | TTTTACTTTACAAGCGTAAC+GGG | - | tig0027586:58208-58227 | None:intergenic | 30.0% |
| ! | ATTCTTGTTTGGATTTGGAT+TGG | - | tig0027586:58246-58265 | None:intergenic | 30.0% |
| CTTTCCTCCTTCTAATAATA+AGG | + | tig0027586:58392-58411 | Msa1434710:CDS | 30.0% | |
| AGTACCTTATTATTAGAAGG+AGG | - | tig0027586:58399-58418 | None:intergenic | 30.0% | |
| TAATAATTACCACTAGTTGC+TGG | + | tig0027586:58492-58511 | Msa1434710:intron | 30.0% | |
| !! | ACCAAACTAATGCTTTGTTT+AGG | + | tig0027586:58522-58541 | Msa1434710:intron | 30.0% |
| ! | ACCTAAACAAAGCATTAGTT+TGG | - | tig0027586:58526-58545 | None:intergenic | 30.0% |
| TGAAATATTGATCCATTCCT+TGG | + | tig0027586:58632-58651 | Msa1434710:intron | 30.0% | |
| TTCCTAGTCGTACAATAAAA+TGG | + | tig0027586:58077-58096 | Msa1434710:five_prime_UTR | 30.0% | |
| ! | TTTTACTTTACAAGCGTAAC+GGG | - | tig0027586:58208-58227 | None:intergenic | 30.0% |
| ! | ATTCTTGTTTGGATTTGGAT+TGG | - | tig0027586:58246-58265 | None:intergenic | 30.0% |
| CTTTCCTCCTTCTAATAATA+AGG | + | tig0027586:58392-58411 | Msa1434710:CDS | 30.0% | |
| AGTACCTTATTATTAGAAGG+AGG | - | tig0027586:58399-58418 | None:intergenic | 30.0% | |
| TAATAATTACCACTAGTTGC+TGG | + | tig0027586:58492-58511 | Msa1434710:intron | 30.0% | |
| !! | ACCAAACTAATGCTTTGTTT+AGG | + | tig0027586:58522-58541 | Msa1434710:intron | 30.0% |
| ! | ACCTAAACAAAGCATTAGTT+TGG | - | tig0027586:58526-58545 | None:intergenic | 30.0% |
| TGAAATATTGATCCATTCCT+TGG | + | tig0027586:58632-58651 | Msa1434710:intron | 30.0% | |
| ! | CTCCATTTTATTGTACGACT+AGG | - | tig0027586:58082-58101 | None:intergenic | 35.0% |
| CTAGTCGTACAATAAAATGG+AGG | + | tig0027586:58080-58099 | Msa1434710:five_prime_UTR | 35.0% | |
| ! | GATGGATTCTTGTTTGGATT+TGG | - | tig0027586:58251-58270 | None:intergenic | 35.0% |
| ! | GAAATGGATGGATTCTTGTT+TGG | - | tig0027586:58257-58276 | None:intergenic | 35.0% |
| ATATTGATCCATTCCTTGGT+TGG | + | tig0027586:58636-58655 | Msa1434710:intron | 35.0% | |
| CAATCTTATGAGAAGAGTCT+GGG | - | tig0027586:58805-58824 | None:intergenic | 35.0% | |
| ! | CTCCATTTTATTGTACGACT+AGG | - | tig0027586:58082-58101 | None:intergenic | 35.0% |
| CTAGTCGTACAATAAAATGG+AGG | + | tig0027586:58080-58099 | Msa1434710:five_prime_UTR | 35.0% | |
| ! | GATGGATTCTTGTTTGGATT+TGG | - | tig0027586:58251-58270 | None:intergenic | 35.0% |
| ! | GAAATGGATGGATTCTTGTT+TGG | - | tig0027586:58257-58276 | None:intergenic | 35.0% |
| ATATTGATCCATTCCTTGGT+TGG | + | tig0027586:58636-58655 | Msa1434710:intron | 35.0% | |
| CAATCTTATGAGAAGAGTCT+GGG | - | tig0027586:58805-58824 | None:intergenic | 35.0% | |
| CAGATGAACGAAGAAATGGA+TGG | - | tig0027586:58269-58288 | None:intergenic | 40.0% | |
| GTTGTAATTGAAGAAGACGG+CGG | - | tig0027586:58351-58370 | None:intergenic | 40.0% | |
| CCGGTTGTAATTGAAGAAGA+CGG | - | tig0027586:58354-58373 | None:intergenic | 40.0% | |
| CCGTCTTCTTCAATTACAAC+CGG | + | tig0027586:58351-58370 | Msa1434710:CDS | 40.0% | |
| TAGAAGGAGGAAAGTGAAGA+AGG | - | tig0027586:58386-58405 | None:intergenic | 40.0% | |
| GTTGTAATTCCAGCAACTAG+TGG | - | tig0027586:58504-58523 | None:intergenic | 40.0% | |
| GCAATCTTATGAGAAGAGTC+TGG | - | tig0027586:58806-58825 | None:intergenic | 40.0% | |
| ATTGGAGACTGAAACTGAAG+AGG | - | tig0027586:58830-58849 | None:intergenic | 40.0% | |
| CTTCAGTTTCAGTCTCCAAT+CGG | + | tig0027586:58830-58849 | Msa1434710:CDS | 40.0% | |
| TGAGAAAGAAACTGACCGAT+TGG | - | tig0027586:58848-58867 | None:intergenic | 40.0% | |
| !!! | GAGAAGGATCTTGGTTTTGT+TGG | - | tig0027586:58958-58977 | None:intergenic | 40.0% |
| ATGTTGTAGGAGAAGGATCT+TGG | - | tig0027586:58967-58986 | None:intergenic | 40.0% | |
| CAGATGAACGAAGAAATGGA+TGG | - | tig0027586:58269-58288 | None:intergenic | 40.0% | |
| GTTGTAATTGAAGAAGACGG+CGG | - | tig0027586:58351-58370 | None:intergenic | 40.0% | |
| CCGGTTGTAATTGAAGAAGA+CGG | - | tig0027586:58354-58373 | None:intergenic | 40.0% | |
| CCGTCTTCTTCAATTACAAC+CGG | + | tig0027586:58351-58370 | Msa1434710:CDS | 40.0% | |
| TAGAAGGAGGAAAGTGAAGA+AGG | - | tig0027586:58386-58405 | None:intergenic | 40.0% | |
| GTTGTAATTCCAGCAACTAG+TGG | - | tig0027586:58504-58523 | None:intergenic | 40.0% | |
| GCAATCTTATGAGAAGAGTC+TGG | - | tig0027586:58806-58825 | None:intergenic | 40.0% | |
| ATTGGAGACTGAAACTGAAG+AGG | - | tig0027586:58830-58849 | None:intergenic | 40.0% | |
| CTTCAGTTTCAGTCTCCAAT+CGG | + | tig0027586:58830-58849 | Msa1434710:CDS | 40.0% | |
| TGAGAAAGAAACTGACCGAT+TGG | - | tig0027586:58848-58867 | None:intergenic | 40.0% | |
| !!! | GAGAAGGATCTTGGTTTTGT+TGG | - | tig0027586:58958-58977 | None:intergenic | 40.0% |
| ATGTTGTAGGAGAAGGATCT+TGG | - | tig0027586:58967-58986 | None:intergenic | 40.0% | |
| CGAGCAGATGAACGAAGAAA+TGG | - | tig0027586:58273-58292 | None:intergenic | 45.0% | |
| TCTAGTCTAACCTAGCCGTA+TGG | + | tig0027586:58293-58312 | Msa1434710:exon | 45.0% | |
| AAGGAGGAAAGTGAAGAAGG+CGG | - | tig0027586:58383-58402 | None:intergenic | 45.0% | |
| ! | TGATTGTTGTTGCTTGCTGC+TGG | + | tig0027586:58453-58472 | Msa1434710:intron | 45.0% |
| TGATCCATTCCTTGGTTGGT+AGG | + | tig0027586:58640-58659 | Msa1434710:intron | 45.0% | |
| TCATGCTTATGCCTAGGGAT+GGG | - | tig0027586:58680-58699 | None:intergenic | 45.0% | |
| GTCTCTCATGCTTATGCCTA+GGG | - | tig0027586:58685-58704 | None:intergenic | 45.0% | |
| AGTCTCTCATGCTTATGCCT+AGG | - | tig0027586:58686-58705 | None:intergenic | 45.0% | |
| AAGCATGAGAGACTCTCTGT+TGG | + | tig0027586:58692-58711 | Msa1434710:CDS | 45.0% | |
| TTATGAGAAGAGTCTGGGTC+TGG | - | tig0027586:58800-58819 | None:intergenic | 45.0% | |
| ACAAGATCGGTGGATGTTGT+AGG | - | tig0027586:58980-58999 | None:intergenic | 45.0% | |
| CGAGCAGATGAACGAAGAAA+TGG | - | tig0027586:58273-58292 | None:intergenic | 45.0% | |
| TCTAGTCTAACCTAGCCGTA+TGG | + | tig0027586:58293-58312 | Msa1434710:exon | 45.0% | |
| AAGGAGGAAAGTGAAGAAGG+CGG | - | tig0027586:58383-58402 | None:intergenic | 45.0% | |
| ! | TGATTGTTGTTGCTTGCTGC+TGG | + | tig0027586:58453-58472 | Msa1434710:intron | 45.0% |
| TGATCCATTCCTTGGTTGGT+AGG | + | tig0027586:58640-58659 | Msa1434710:intron | 45.0% | |
| TCATGCTTATGCCTAGGGAT+GGG | - | tig0027586:58680-58699 | None:intergenic | 45.0% | |
| GTCTCTCATGCTTATGCCTA+GGG | - | tig0027586:58685-58704 | None:intergenic | 45.0% | |
| AGTCTCTCATGCTTATGCCT+AGG | - | tig0027586:58686-58705 | None:intergenic | 45.0% | |
| AAGCATGAGAGACTCTCTGT+TGG | + | tig0027586:58692-58711 | Msa1434710:CDS | 45.0% | |
| TTATGAGAAGAGTCTGGGTC+TGG | - | tig0027586:58800-58819 | None:intergenic | 45.0% | |
| ACAAGATCGGTGGATGTTGT+AGG | - | tig0027586:58980-58999 | None:intergenic | 45.0% | |
| !! | TAATATAAATAAATAATTCT+CGG | - | tig0027586:58142-58161 | None:intergenic | 5.0% |
| !! | TAATATAAATAAATAATTCT+CGG | - | tig0027586:58142-58161 | None:intergenic | 5.0% |
| TGATAAGAAGAGGACGGCTG+TGG | - | tig0027586:58328-58347 | None:intergenic | 50.0% | |
| AAGACGGCGGTGATAAGAAG+AGG | - | tig0027586:58338-58357 | None:intergenic | 50.0% | |
| CACACCTACCAACCAAGGAA+TGG | - | tig0027586:58647-58666 | None:intergenic | 50.0% | |
| AAGTGCACACCTACCAACCA+AGG | - | tig0027586:58652-58671 | None:intergenic | 50.0% | |
| CATGCTTATGCCTAGGGATG+GGG | - | tig0027586:58679-58698 | None:intergenic | 50.0% | |
| CTCATGCTTATGCCTAGGGA+TGG | - | tig0027586:58681-58700 | None:intergenic | 50.0% | |
| ATTGGAGCTGGAGAAGTTGC+TGG | - | tig0027586:58913-58932 | None:intergenic | 50.0% | |
| CATCACGATCAGATTGGAGC+TGG | - | tig0027586:58925-58944 | None:intergenic | 50.0% | |
| GAGCAGCATCACGATCAGAT+TGG | - | tig0027586:58931-58950 | None:intergenic | 50.0% | |
| TCGGTGGATGTTGTAGGAGA+AGG | - | tig0027586:58974-58993 | None:intergenic | 50.0% | |
| TGATAAGAAGAGGACGGCTG+TGG | - | tig0027586:58328-58347 | None:intergenic | 50.0% | |
| AAGACGGCGGTGATAAGAAG+AGG | - | tig0027586:58338-58357 | None:intergenic | 50.0% | |
| CACACCTACCAACCAAGGAA+TGG | - | tig0027586:58647-58666 | None:intergenic | 50.0% | |
| AAGTGCACACCTACCAACCA+AGG | - | tig0027586:58652-58671 | None:intergenic | 50.0% | |
| CATGCTTATGCCTAGGGATG+GGG | - | tig0027586:58679-58698 | None:intergenic | 50.0% | |
| CTCATGCTTATGCCTAGGGA+TGG | - | tig0027586:58681-58700 | None:intergenic | 50.0% | |
| ATTGGAGCTGGAGAAGTTGC+TGG | - | tig0027586:58913-58932 | None:intergenic | 50.0% | |
| CATCACGATCAGATTGGAGC+TGG | - | tig0027586:58925-58944 | None:intergenic | 50.0% | |
| GAGCAGCATCACGATCAGAT+TGG | - | tig0027586:58931-58950 | None:intergenic | 50.0% | |
| TCGGTGGATGTTGTAGGAGA+AGG | - | tig0027586:58974-58993 | None:intergenic | 50.0% | |
| CTAACCTAGCCGTATGGACG+TGG | + | tig0027586:58299-58318 | Msa1434710:exon | 55.0% | |
| CGGCGGTGATAAGAAGAGGA+CGG | - | tig0027586:58334-58353 | None:intergenic | 55.0% | |
| AGGAAAGTGAAGAAGGCGGC+AGG | - | tig0027586:58379-58398 | None:intergenic | 55.0% | |
| CTTATGCCTAGGGATGGGGA+CGG | - | tig0027586:58675-58694 | None:intergenic | 55.0% | |
| CTAACCTAGCCGTATGGACG+TGG | + | tig0027586:58299-58318 | Msa1434710:exon | 55.0% | |
| CGGCGGTGATAAGAAGAGGA+CGG | - | tig0027586:58334-58353 | None:intergenic | 55.0% | |
| AGGAAAGTGAAGAAGGCGGC+AGG | - | tig0027586:58379-58398 | None:intergenic | 55.0% | |
| CTTATGCCTAGGGATGGGGA+CGG | - | tig0027586:58675-58694 | None:intergenic | 55.0% | |
| CTGTGGCTGCCACGTCCATA+CGG | - | tig0027586:58311-58330 | None:intergenic | 60.0% | |
| GTGAAGAAGGCGGCAGGATC+CGG | - | tig0027586:58373-58392 | None:intergenic | 60.0% | |
| AGAAGAGTCTGGGTCTGGCG+AGG | - | tig0027586:58795-58814 | None:intergenic | 60.0% | |
| ACCGCAGCAGGCACAAGATG+GGG | - | tig0027586:58887-58906 | None:intergenic | 60.0% | |
| CACCGCAGCAGGCACAAGAT+GGG | - | tig0027586:58888-58907 | None:intergenic | 60.0% | |
| CTGTGGCTGCCACGTCCATA+CGG | - | tig0027586:58311-58330 | None:intergenic | 60.0% | |
| GTGAAGAAGGCGGCAGGATC+CGG | - | tig0027586:58373-58392 | None:intergenic | 60.0% | |
| AGAAGAGTCTGGGTCTGGCG+AGG | - | tig0027586:58795-58814 | None:intergenic | 60.0% | |
| ACCGCAGCAGGCACAAGATG+GGG | - | tig0027586:58887-58906 | None:intergenic | 60.0% | |
| CACCGCAGCAGGCACAAGAT+GGG | - | tig0027586:58888-58907 | None:intergenic | 60.0% | |
| GCTGCCACGTCCATACGGCT+AGG | - | tig0027586:58306-58325 | None:intergenic | 65.0% | |
| GCACTTCCGTCCCCATCCCT+AGG | + | tig0027586:58666-58685 | Msa1434710:CDS | 65.0% | |
| TGGGTCTGGCGAGGAGGAAG+AGG | - | tig0027586:58786-58805 | None:intergenic | 65.0% | |
| AGAGTCTGGGTCTGGCGAGG+AGG | - | tig0027586:58792-58811 | None:intergenic | 65.0% | |
| CCGCAGCAGGCACAAGATGG+GGG | - | tig0027586:58886-58905 | None:intergenic | 65.0% | |
| CCCCCATCTTGTGCCTGCTG+CGG | + | tig0027586:58883-58902 | Msa1434710:CDS | 65.0% | |
| CCACCGCAGCAGGCACAAGA+TGG | - | tig0027586:58889-58908 | None:intergenic | 65.0% | |
| CCATCTTGTGCCTGCTGCGG+TGG | + | tig0027586:58886-58905 | Msa1434710:CDS | 65.0% | |
| AGTTGCTGGTCCACCGCAGC+AGG | - | tig0027586:58899-58918 | None:intergenic | 65.0% | |
| GCTGCCACGTCCATACGGCT+AGG | - | tig0027586:58306-58325 | None:intergenic | 65.0% | |
| GCACTTCCGTCCCCATCCCT+AGG | + | tig0027586:58666-58685 | Msa1434710:CDS | 65.0% | |
| TGGGTCTGGCGAGGAGGAAG+AGG | - | tig0027586:58786-58805 | None:intergenic | 65.0% | |
| AGAGTCTGGGTCTGGCGAGG+AGG | - | tig0027586:58792-58811 | None:intergenic | 65.0% | |
| CCGCAGCAGGCACAAGATGG+GGG | - | tig0027586:58886-58905 | None:intergenic | 65.0% | |
| CCCCCATCTTGTGCCTGCTG+CGG | + | tig0027586:58883-58902 | Msa1434710:CDS | 65.0% | |
| CCACCGCAGCAGGCACAAGA+TGG | - | tig0027586:58889-58908 | None:intergenic | 65.0% | |
| CCATCTTGTGCCTGCTGCGG+TGG | + | tig0027586:58886-58905 | Msa1434710:CDS | 65.0% | |
| AGTTGCTGGTCCACCGCAGC+AGG | - | tig0027586:58899-58918 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027586 | gene | 58058 | 59000 | 58058 | ID=Msa1434710;Name=Msa1434710 |
| tig0027586 | mRNA | 58058 | 59000 | 58058 | ID=Msa1434710-mRNA-1;Parent=Msa1434710;Name=Msa1434710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=254|1|0.5|1|1|1|2|0|147 |
| tig0027586 | exon | 58058 | 58413 | 58058 | ID=Msa1434710-mRNA-1:exon:9273;Parent=Msa1434710-mRNA-1 |
| tig0027586 | exon | 58662 | 59000 | 58662 | ID=Msa1434710-mRNA-1:exon:9274;Parent=Msa1434710-mRNA-1 |
| tig0027586 | five_prime_UTR | 58058 | 58311 | 58058 | ID=Msa1434710-mRNA-1:five_prime_utr;Parent=Msa1434710-mRNA-1 |
| tig0027586 | CDS | 58312 | 58413 | 58312 | ID=Msa1434710-mRNA-1:cds;Parent=Msa1434710-mRNA-1 |
| tig0027586 | CDS | 58662 | 59000 | 58662 | ID=Msa1434710-mRNA-1:cds;Parent=Msa1434710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
