AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1334350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334350 MtrunA17_Chr4g0074071 98.879 446 5 0 1 446 1 446 0.0 919
Msa1334350 MtrunA17_Chr2g0305881 66.055 218 66 5 1 215 1 213 6.71e-96 287
Msa1334350 MtrunA17_Chr2g0305861 83.969 131 21 0 316 446 1 131 4.46e-80 243
Msa1334350 MtrunA17_Chr2g0305871 73.077 104 28 0 216 319 6 109 8.48e-52 171
Msa1334350 MtrunA17_Chr5g0430241 27.812 320 215 9 90 397 30 345 5.90e-30 120
Msa1334350 MtrunA17_Chr7g0242601 27.885 312 209 8 97 397 93 399 2.23e-29 119
Msa1334350 MtrunA17_Chr4g0006241 28.882 322 203 11 93 397 81 393 5.46e-29 118
Msa1334350 MtrunA17_Chr3g0105171 30.682 264 162 8 148 397 80 336 3.64e-24 103
Msa1334350 MtrunA17_Chr1g0175301 23.642 313 215 6 105 394 33 344 1.54e-19 90.1
Msa1334350 MtrunA17_Chr7g0258651 23.913 322 219 9 91 394 31 344 1.59e-17 84.0
Msa1334350 MtrunA17_Chr1g0210511 24.569 232 157 5 179 394 10 239 3.84e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334350 AT4G30950.1 72.197 446 123 1 1 445 1 446 0.0 684
Msa1334350 AT3G11170.1 27.027 370 243 12 69 423 66 423 1.39e-28 117
Msa1334350 AT5G05580.1 28.070 342 222 11 97 423 84 416 4.86e-28 115
Msa1334350 AT2G29980.1 27.526 287 193 7 148 423 79 361 2.15e-27 113
Msa1334350 AT5G05580.2 28.664 307 195 11 97 388 84 381 4.26e-26 109
Msa1334350 AT3G12120.1 27.027 259 171 6 152 394 87 343 1.06e-20 94.0
Msa1334350 AT3G12120.2 27.027 259 171 6 152 394 87 343 1.06e-20 94.0
Msa1334350 AT2G29980.2 27.957 186 123 4 148 324 79 262 6.20e-18 84.3

Find 120 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTCATTACTCCAATTAA+AGG 0.166180 8_4:+54735722 Msa1334350:CDS
ATAACTGTAACTTTATTTCT+AGG 0.169896 8_4:-54736348 None:intergenic
CATGGTTGGGCTATCACTTC+TGG 0.189410 8_4:+54738541 Msa1334350:CDS
TTCAATAGTATTGTTTAATA+TGG 0.198719 8_4:+54742171 Msa1334350:three_prime_UTR
CCAGTCTTGTAAATAATTAA+TGG 0.208810 8_4:-54738486 None:intergenic
CTCGTTAAGTTCACGGTTTA+TGG 0.224294 8_4:+54742238 Msa1334350:three_prime_UTR
ATAAATCCATCCAAGAAAAT+TGG 0.226172 8_4:+54741566 Msa1334350:CDS
TTTGTTGCCTGAACCCTTTA+TGG 0.227035 8_4:-54736308 None:intergenic
AAAGAATGAAAACCTTTAAT+TGG 0.227699 8_4:-54735734 None:intergenic
TGGACAGGGACTGCTGTAAC+TGG 0.230223 8_4:+54737092 Msa1334350:CDS
TTCACCCTCTTTATTTCATT+TGG 0.236235 8_4:-54738420 None:intergenic
ACAGGCTTATTTAGCCTAAA+AGG 0.252843 8_4:+54736273 Msa1334350:intron
GCTGCACAAGCACAGCTTAA+TGG 0.258653 8_4:+54740195 Msa1334350:CDS
GGGATATATGGTGTGGAATA+TGG 0.265223 8_4:-54741510 None:intergenic
TTGAGGAAAGCAATAATATA+TGG 0.266288 8_4:+54738194 Msa1334350:CDS
ATAAGAAAATCCACCTTCTT+AGG 0.267567 8_4:-54736513 None:intergenic
CTAATTGGACGAGATTCTTT+AGG 0.270288 8_4:-54742030 None:intergenic
GCCCCACAGTTCTTTGTTAT+AGG 0.274592 8_4:+54737247 Msa1334350:intron
TACTTCCTCTGGCTTGGGCT+TGG 0.300422 8_4:+54737072 Msa1334350:CDS
ATGCCTGATTATGCCTAATT+AGG 0.301317 8_4:+54742069 Msa1334350:exon
TTTGTTCTCAAATTCAAAAC+TGG 0.304706 8_4:-54735849 None:intergenic
TGGCCATCCAATTGCTATAA+AGG 0.318227 8_4:-54738466 None:intergenic
AAATGACAGTACACATTATT+AGG 0.321172 8_4:-54742442 None:intergenic
TGGATAAATTAGTGGCAAAA+AGG 0.327260 8_4:-54737335 None:intergenic
TATCGATCTGCGTCCACATT+TGG 0.337003 8_4:+54735566 None:intergenic
TAAATCCATCCAAGAAAATT+GGG 0.338050 8_4:+54741567 Msa1334350:CDS
AAGCCAACTTGGACCTAATT+AGG 0.340638 8_4:-54742082 None:intergenic
TCATGGGATGGATAAAATTC+TGG 0.348865 8_4:+54738511 Msa1334350:CDS
CCTCTGGCTTGGGCTTGGAC+AGG 0.352571 8_4:+54737077 Msa1334350:CDS
TATACGAGCTGTGGCAATTC+CGG 0.360109 8_4:+54736368 Msa1334350:CDS
GGTGATGGGTTAATCCATAA+AGG 0.366623 8_4:+54736294 Msa1334350:CDS
GTATCTACTTCCTCTGGCTT+GGG 0.367325 8_4:+54737067 Msa1334350:CDS
GGTATCTACTTCCTCTGGCT+TGG 0.369690 8_4:+54737066 Msa1334350:CDS
AGTTTATCTTTCAGAGAGAC+TGG 0.373400 8_4:+54735638 Msa1334350:five_prime_UTR
AAAGAGGGTGAAGATAAGTT+TGG 0.373712 8_4:+54738431 Msa1334350:CDS
ATACTGCTTGGCAGCCTGTT+TGG 0.377429 8_4:+54738144 Msa1334350:CDS
GATATGGTCCATTTCGTTGC+TGG 0.383059 8_4:+54738216 Msa1334350:CDS
ATCAGCCACTTCCTATGCGC+TGG 0.393227 8_4:+54737016 Msa1334350:CDS
TTCATTGTGCTTACCCTCAA+TGG 0.394646 8_4:+54740223 Msa1334350:CDS
CTCTGGCTTGGGCTTGGACA+GGG 0.396821 8_4:+54737078 Msa1334350:CDS
TCAAACTCATCCTGCCAAAC+AGG 0.398783 8_4:-54738158 None:intergenic
CCATTAATTATTTACAAGAC+TGG 0.404814 8_4:+54738486 Msa1334350:CDS
TATTTACAAGACTGGAATCA+TGG 0.410988 8_4:+54738494 Msa1334350:CDS
CATAACAAGGGGAAATTACT+TGG 0.411596 8_4:+54742211 Msa1334350:three_prime_UTR
ATGGTTGGGCTATCACTTCT+GGG 0.416170 8_4:+54738542 Msa1334350:CDS
TGCTTGGCAGCCTGTTTGGC+AGG 0.421716 8_4:+54738148 Msa1334350:CDS
CGATCTGCGTCCACATTTGG+AGG 0.427034 8_4:+54735569 None:intergenic
TTAAATCGCCATGGCTCATA+TGG 0.429770 8_4:-54737355 None:intergenic
GGACCTAATTAGGCATAATC+AGG 0.437567 8_4:-54742072 None:intergenic
CTGTACTCCGCACTTTCCAC+TGG 0.440501 8_4:-54736402 None:intergenic
TCCGCACTTTCCACTGGAGC+TGG 0.444789 8_4:-54736396 None:intergenic
TGGAGCTCTCGTTAAGTTCA+CGG 0.447567 8_4:+54742231 Msa1334350:three_prime_UTR
TGAATGAGGCTAGTTGGAAT+TGG 0.451740 8_4:+54741929 Msa1334350:CDS
GGTTAATCCATAAAGGGTTC+AGG 0.453241 8_4:+54736301 Msa1334350:CDS
CATTACTTCTCTTCCTAAGA+AGG 0.455511 8_4:+54736500 Msa1334350:CDS
TCAAATTCAAAACTGGCCTC+TGG 0.458016 8_4:-54735842 None:intergenic
GGCTCATATGGATAAATTAG+TGG 0.465890 8_4:-54737343 None:intergenic
ATAGACATCCAGCAACGAAA+TGG 0.467653 8_4:-54738224 None:intergenic
TCCACTGGAGCTGGTTCTAC+CGG 0.468139 8_4:-54736387 None:intergenic
AAAGCAATAATATATGGATA+TGG 0.470604 8_4:+54738200 Msa1334350:CDS
AGTATCTGAATGAGGCTAGT+TGG 0.473014 8_4:+54741923 Msa1334350:intron
GGACAGGGACTGCTGTAACT+GGG 0.473850 8_4:+54737093 Msa1334350:CDS
TCAGCCACTTCCTATGCGCT+GGG 0.478034 8_4:+54737017 Msa1334350:CDS
GAATATGGACATTAATATCA+TGG 0.492331 8_4:-54741495 None:intergenic
GTGATGGGTTAATCCATAAA+GGG 0.495739 8_4:+54736295 Msa1334350:CDS
AATGTAACATTGTCTGGAAG+CGG 0.499209 8_4:-54736468 None:intergenic
TGCATGAAAATAAGCCAACT+TGG 0.501498 8_4:-54742093 None:intergenic
GAGAGAGAGTTGTTTGGTGT+GGG 0.505795 8_4:-54735594 None:intergenic
TTCTGGTTGATGCCATGGTT+GGG 0.509958 8_4:+54738528 Msa1334350:CDS
GCCCTGGTATCTACTTCCTC+TGG 0.511022 8_4:+54737061 Msa1334350:CDS
AGAAGACATTGTTGGAACTC+TGG 0.511878 8_4:+54737312 Msa1334350:CDS
GACAGGGACTGCTGTAACTG+GGG 0.512837 8_4:+54737094 Msa1334350:CDS
AAGCCCCAGCGCATAGGAAG+TGG 0.514449 8_4:-54737021 None:intergenic
TGCAGGGTTCTTCATTCCAG+AGG 0.514835 8_4:+54735826 Msa1334350:intron
TTATTTAGCCTAAAAGGTGA+TGG 0.518579 8_4:+54736279 Msa1334350:CDS
ATGCCTAATTAGGTCCAAGT+TGG 0.519972 8_4:+54742079 Msa1334350:exon
TTAGACCAAATGAAATAAAG+AGG 0.524360 8_4:+54738415 Msa1334350:CDS
AGAGAGAGAGTTGTTTGGTG+TGG 0.525514 8_4:-54735595 None:intergenic
AGCTCTGAGAGACATTCATT+AGG 0.527304 8_4:+54742278 Msa1334350:three_prime_UTR
AGCCAGAGGAAGTAGATACC+AGG 0.530649 8_4:-54737063 None:intergenic
TTTAGGAGCAACTTCATCAA+AGG 0.532877 8_4:-54742013 None:intergenic
TATTTAGCCTAAAAGGTGAT+GGG 0.537194 8_4:+54736280 Msa1334350:CDS
ATTCTGGTTGATGCCATGGT+TGG 0.540405 8_4:+54738527 Msa1334350:CDS
CATAAGAAGCCCCAGCGCAT+AGG 0.540899 8_4:-54737027 None:intergenic
TCTTTCAGAGAGACTGGGAG+AGG 0.546766 8_4:+54735644 Msa1334350:five_prime_UTR
CTTTCAGAGAGACTGGGAGA+GGG 0.550760 8_4:+54735645 Msa1334350:five_prime_UTR
TCGCCTTTATAGCAATTGGA+TGG 0.555332 8_4:+54738463 Msa1334350:CDS
ATTTACAAGACTGGAATCAT+GGG 0.557510 8_4:+54738495 Msa1334350:CDS
TTCAGAGAGACTGGGAGAGG+GGG 0.560001 8_4:+54735647 Msa1334350:five_prime_UTR
GTTTATCTTTCAGAGAGACT+GGG 0.564829 8_4:+54735639 Msa1334350:five_prime_UTR
TTATGATTTCTAAAGCGCCC+TGG 0.568345 8_4:+54737045 Msa1334350:CDS
TAAAATTCTGGTTGATGCCA+TGG 0.571569 8_4:+54738523 Msa1334350:CDS
GATCTGCGTCCACATTTGGA+GGG 0.574640 8_4:+54735570 Msa1334350:five_prime_UTR
ATTTCTGCTCATTACTCACC+TGG 0.575772 8_4:+54735873 Msa1334350:CDS
TTTCAGAGAGACTGGGAGAG+GGG 0.577166 8_4:+54735646 Msa1334350:five_prime_UTR
TCCGGTAGAACCAGCTCCAG+TGG 0.580163 8_4:+54736386 Msa1334350:CDS
GCTGGATGTCTATAGCTCAC+TGG 0.582755 8_4:+54738234 Msa1334350:CDS
AAATTGGTAGAAGACATTGT+TGG 0.585428 8_4:+54737304 Msa1334350:CDS
ATCTGCGTCCACATTTGGAG+GGG 0.586870 8_4:+54735571 Msa1334350:five_prime_UTR
CATCCAAGAAAATTGGGGAA+AGG 0.590847 8_4:+54741573 Msa1334350:CDS
TAATTTATCCATATGAGCCA+TGG 0.590928 8_4:+54737347 Msa1334350:CDS
GCCAGAGGAAGTAGATACCA+GGG 0.594327 8_4:-54737062 None:intergenic
GCTGCTCGTAAATTATAGCT+TGG 0.594700 8_4:-54741541 None:intergenic
GGTTGAAAGAAGATACTGCT+TGG 0.603426 8_4:+54738132 Msa1334350:intron
TTGTCATGCTTAAATCGCCA+TGG 0.610770 8_4:-54737364 None:intergenic
ATGCATAAACAGATGTCTAA+CGG 0.613102 8_4:+54742373 Msa1334350:three_prime_UTR
AGATTGATGATGTTAAAGCA+TGG 0.613392 8_4:+54736979 Msa1334350:CDS
TAGACCAAATGAAATAAAGA+GGG 0.614606 8_4:+54738416 Msa1334350:CDS
TTGGAGTAATGAATTTGCAG+AGG 0.616285 8_4:-54735715 None:intergenic
AAACAGCTAGCAGAACGCTA+TGG 0.617716 8_4:+54736426 Msa1334350:CDS
GGTGTGGGCCCCTCCAAATG+TGG 0.623715 8_4:-54735579 None:intergenic
AGTTACAGTTATACGAGCTG+TGG 0.623877 8_4:+54736359 Msa1334350:CDS
CCTGTCCAAGCCCAAGCCAG+AGG 0.628134 8_4:-54737077 None:intergenic
ACCAGCTCCAGTGGAAAGTG+CGG 0.631323 8_4:+54736395 Msa1334350:CDS
AAATCCATCCAAGAAAATTG+GGG 0.635467 8_4:+54741568 Msa1334350:CDS
CAGAAGTGATAGCCCAACCA+TGG 0.650623 8_4:-54738540 None:intergenic
ATAGATGAGCACTTTCACCA+TGG 0.653236 8_4:+54740122 Msa1334350:intron
ACAAGACTGGAATCATGGGA+TGG 0.658676 8_4:+54738499 Msa1334350:CDS
CAGCCACTTCCTATGCGCTG+GGG 0.660759 8_4:+54737018 Msa1334350:CDS
TGGTGCAGTATGATGTACCA+TGG 0.715874 8_4:-54740139 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAATCATTATTTAAA+AGG - chr8_4:54736243-54736262 None:intergenic 10.0%
!!! TAATCATTTTAAATTTTTGA+AGG + chr8_4:54736950-54736969 Msa1334350:intron 10.0%
!! CTGAAATATATATTAATAAT+GGG - chr8_4:54737556-54737575 None:intergenic 10.0%
!! ACTGAAATATATATTAATAA+TGG - chr8_4:54737557-54737576 None:intergenic 10.0%
!!! ATTCATTTTAAAGATAAAAA+TGG + chr8_4:54739456-54739475 Msa1334350:intron 10.0%
!!! AGAAAGTTTTTTAAAAAAAA+AGG - chr8_4:54739970-54739989 None:intergenic 10.0%
!!! GGTAAAAAATATTTTTTTTT+GGG + chr8_4:54741139-54741158 Msa1334350:intron 10.0%
!!! GTAAAAAATATTTTTTTTTG+GGG + chr8_4:54741140-54741159 Msa1334350:intron 10.0%
!!! AAAAATGTTTATAGAAATTT+TGG + chr8_4:54741192-54741211 Msa1334350:intron 10.0%
!!! AAAATGTTTATAGAAATTTT+GGG + chr8_4:54741193-54741212 Msa1334350:intron 10.0%
!!! TTTTTGATTTTTTTATTTGT+GGG + chr8_4:54741226-54741245 Msa1334350:intron 10.0%
!!! AAAGATAAACTCTTTTTATT+TGG - chr8_4:54735629-54735648 None:intergenic 15.0%
!! GCAAAATAGTAAAATAATTA+AGG - chr8_4:54735914-54735933 None:intergenic 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr8_4:54736177-54736196 Msa1334350:intron 15.0%
!! AGAAAAACAAAAAAATAGAA+GGG - chr8_4:54737423-54737442 None:intergenic 15.0%
!! TAGAAAAACAAAAAAATAGA+AGG - chr8_4:54737424-54737443 None:intergenic 15.0%
!!! TTCTATTTTTTTGTTTTTCT+AGG + chr8_4:54737423-54737442 Msa1334350:intron 15.0%
!! ATAAAAAAAGATGAATTCAA+AGG + chr8_4:54737748-54737767 Msa1334350:intron 15.0%
!! AAATAAAAACAAAAAAGACA+CGG - chr8_4:54738607-54738626 None:intergenic 15.0%
!!! TTGTTTTTATTTCTTTTGTT+TGG + chr8_4:54738615-54738634 Msa1334350:intron 15.0%
!! ACAATCTTATATTAAAAGAA+TGG + chr8_4:54738806-54738825 Msa1334350:intron 15.0%
!! TAAAAAAAATCAATGAAGAT+AGG - chr8_4:54739577-54739596 None:intergenic 15.0%
!! ACTACACAATTTATTAATTA+TGG + chr8_4:54739736-54739755 Msa1334350:intron 15.0%
!! TTATGGATAAATATAACATT+AGG + chr8_4:54739753-54739772 Msa1334350:intron 15.0%
!!! TTTTTTAAAAAACTTTCTAG+AGG + chr8_4:54739972-54739991 Msa1334350:intron 15.0%
!!! AAATAATTTTGTTCAATTAG+GGG - chr8_4:54740849-54740868 None:intergenic 15.0%
!!! CAAATAATTTTGTTCAATTA+GGG - chr8_4:54740850-54740869 None:intergenic 15.0%
!! CTAATTGAACAAAATTATTT+GGG + chr8_4:54740849-54740868 Msa1334350:intron 15.0%
!! TAATTGAACAAAATTATTTG+GGG + chr8_4:54740850-54740869 Msa1334350:intron 15.0%
!!! AAATAAGTTGATTTTATAGT+GGG - chr8_4:54740881-54740900 None:intergenic 15.0%
!! TATAAAATCAACTTATTTGT+GGG + chr8_4:54740883-54740902 Msa1334350:intron 15.0%
!!! AATTTACGGTAATTTTTTTT+TGG + chr8_4:54740977-54740996 Msa1334350:intron 15.0%
!!! ATTTACGGTAATTTTTTTTT+GGG + chr8_4:54740978-54740997 Msa1334350:intron 15.0%
!! GGGTAAAAAAAAAAAATTTA+CGG + chr8_4:54741102-54741121 Msa1334350:intron 15.0%
!!! TTTACGGTAAAAAATTTTTT+CGG + chr8_4:54741118-54741137 Msa1334350:intron 15.0%
!!! CGGTAAAAAATATTTTTTTT+TGG + chr8_4:54741138-54741157 Msa1334350:intron 15.0%
!!! AAATGTTTATAGAAATTTTG+GGG + chr8_4:54741194-54741213 Msa1334350:intron 15.0%
!!! CTTTTTGATTTTTTTATTTG+TGG + chr8_4:54741225-54741244 Msa1334350:intron 15.0%
!! TTCAATAGTATTGTTTAATA+TGG + chr8_4:54742171-54742190 Msa1334350:three_prime_UTR 15.0%
!! AAATTCATTACTCCAATTAA+AGG + chr8_4:54735722-54735741 Msa1334350:CDS 20.0%
!! AAAGAATGAAAACCTTTAAT+TGG - chr8_4:54735737-54735756 None:intergenic 20.0%
!! GTATTTATTTAAGAGTTGAA+AGG - chr8_4:54735771-54735790 None:intergenic 20.0%
!!! CAAAATATCTTAGCTTTATA+CGG + chr8_4:54735790-54735809 Msa1334350:intron 20.0%
!!! ATAACTGTAACTTTATTTCT+AGG - chr8_4:54736351-54736370 None:intergenic 20.0%
!!! TCATTTAAGTTTTAGAACAT+AGG + chr8_4:54736570-54736589 Msa1334350:intron 20.0%
!!! CATTTAAGTTTTAGAACATA+GGG + chr8_4:54736571-54736590 Msa1334350:intron 20.0%
!!! GTAATTTTTTGCCAAAAATA+TGG - chr8_4:54736843-54736862 None:intergenic 20.0%
!!! ATCATTTTCAACAAACAAAT+TGG + chr8_4:54737288-54737307 Msa1334350:CDS 20.0%
!!! TATATTAATAATGGGTTTTC+AGG - chr8_4:54737548-54737567 None:intergenic 20.0%
!! AAAGCAATAATATATGGATA+TGG + chr8_4:54738200-54738219 Msa1334350:CDS 20.0%
!! AACAATATAAAAACGTTTCA+AGG - chr8_4:54738265-54738284 None:intergenic 20.0%
!!! TTTTATTTCTTTTGTTTGGA+TGG + chr8_4:54738619-54738638 Msa1334350:intron 20.0%
!! TTTATGTATTGAAGTAGAAT+TGG + chr8_4:54738739-54738758 Msa1334350:intron 20.0%
!! ACTATATATACATTAAAGCT+CGG - chr8_4:54738778-54738797 None:intergenic 20.0%
!! TTTAATATAAGATTGTGAGT+GGG - chr8_4:54738802-54738821 None:intergenic 20.0%
!!! TTTTAATATAAGATTGTGAG+TGG - chr8_4:54738803-54738822 None:intergenic 20.0%
!!! ACTTTATATTTTTACTCTGT+TGG + chr8_4:54739698-54739717 Msa1334350:intron 20.0%
!!! AAACACAGTCTAAATATTTT+GGG - chr8_4:54740031-54740050 None:intergenic 20.0%
!! AAAAAATACATTACCATTGA+GGG - chr8_4:54740239-54740258 None:intergenic 20.0%
!! TAAAATATGATCAGAGAAAA+TGG + chr8_4:54740474-54740493 Msa1334350:intron 20.0%
!! TAAGCATTAAAACATTTCTA+AGG - chr8_4:54740652-54740671 None:intergenic 20.0%
!! TCTTTCACAAATGTAATATA+AGG - chr8_4:54740732-54740751 None:intergenic 20.0%
!!! CCAAATAATTTTGTTCAATT+AGG - chr8_4:54740851-54740870 None:intergenic 20.0%
!! CCTAATTGAACAAAATTATT+TGG + chr8_4:54740848-54740867 Msa1334350:intron 20.0%
!!! CAAATAAGTTGATTTTATAG+TGG - chr8_4:54740882-54740901 None:intergenic 20.0%
!! CTATAAAATCAACTTATTTG+TGG + chr8_4:54740882-54740901 Msa1334350:intron 20.0%
!! TACCCAAAAAAAATTAATGT+GGG - chr8_4:54740920-54740939 None:intergenic 20.0%
!! TTACCCAAAAAAAATTAATG+TGG - chr8_4:54740921-54740940 None:intergenic 20.0%
!!! TTTTTTGGGTAAAAAAATTC+CGG + chr8_4:54740929-54740948 Msa1334350:intron 20.0%
!!! TTTACGGTAATTTTTTTTTG+GGG + chr8_4:54740979-54740998 Msa1334350:intron 20.0%
!!! GGGGTAAATATTTTTTTTTA+CGG + chr8_4:54741029-54741048 Msa1334350:intron 20.0%
!! TGAAAATTCACAAAACAAAA+AGG - chr8_4:54741268-54741287 None:intergenic 20.0%
!!! AAATTATAGCTTGGTATTTT+CGG - chr8_4:54741535-54741554 None:intergenic 20.0%
!!! TTATATCGAAAAGTATGTTT+TGG - chr8_4:54741726-54741745 None:intergenic 20.0%
!!! AAACTTTCAAATCTTTTATC+TGG - chr8_4:54741751-54741770 None:intergenic 20.0%
!!! ATGACATTTTAGCTAATTAT+TGG + chr8_4:54741875-54741894 Msa1334350:intron 20.0%
!! ACTTTCTTCAAAAATCTAAT+TGG - chr8_4:54742048-54742067 None:intergenic 20.0%
!!! TTTTTTTTATGTATCAGAGT+AGG + chr8_4:54742117-54742136 Msa1334350:three_prime_UTR 20.0%
!! TTGTTATGTGATTTGAAAAA+TGG - chr8_4:54742199-54742218 None:intergenic 20.0%
!!! ATTTTTCAAATCACATAACA+AGG + chr8_4:54742198-54742217 Msa1334350:three_prime_UTR 20.0%
!!! TTTTTCAAATCACATAACAA+GGG + chr8_4:54742199-54742218 Msa1334350:three_prime_UTR 20.0%
! CTCAATTTCATCTCAAAAAA+TGG + chr8_4:54735686-54735705 Msa1334350:exon 25.0%
! TTTGTTCTCAAATTCAAAAC+TGG - chr8_4:54735852-54735871 None:intergenic 25.0%
! TTTGAGAAAATGACATAACT+CGG - chr8_4:54736170-54736189 None:intergenic 25.0%
!! TCTTTTAATGTAACATTGTC+TGG - chr8_4:54736477-54736496 None:intergenic 25.0%
! TATATGATTATTCTGTCTCT+AGG + chr8_4:54736794-54736813 Msa1334350:intron 25.0%
! AAAGTGAGAAAAAACAAGAA+TGG - chr8_4:54736820-54736839 None:intergenic 25.0%
!! TTTCTCACTTTCCATATTTT+TGG + chr8_4:54736829-54736848 Msa1334350:intron 25.0%
! ATTATTACAAAAAGGAAGAC+AGG - chr8_4:54736885-54736904 None:intergenic 25.0%
!! TCCTTTTTGTAATAATTCCA+TGG + chr8_4:54736889-54736908 Msa1334350:intron 25.0%
! ACCATGGAATTATTACAAAA+AGG - chr8_4:54736893-54736912 None:intergenic 25.0%
! ATATTTCAGTAGCTTAATCA+AGG + chr8_4:54737567-54737586 Msa1334350:intron 25.0%
! TATTTCAGTAGCTTAATCAA+GGG + chr8_4:54737568-54737587 Msa1334350:intron 25.0%
! TAAATCATCTCTAATGATAC+AGG + chr8_4:54738111-54738130 Msa1334350:intron 25.0%
! ATTATTGCTTTCCTCAAAAA+TGG - chr8_4:54738191-54738210 None:intergenic 25.0%
! TTGAGGAAAGCAATAATATA+TGG + chr8_4:54738194-54738213 Msa1334350:CDS 25.0%
!! ACGTTTTTATATTGTTCCTA+AGG + chr8_4:54738269-54738288 Msa1334350:intron 25.0%
! AAGTTAATGAAATAGTCCTT+AGG - chr8_4:54738288-54738307 None:intergenic 25.0%
!!! AATTAGTTTGCATCAAGATA+CGG - chr8_4:54738358-54738377 None:intergenic 25.0%
! TTAGACCAAATGAAATAAAG+AGG + chr8_4:54738415-54738434 Msa1334350:CDS 25.0%
! TAGACCAAATGAAATAAAGA+GGG + chr8_4:54738416-54738435 Msa1334350:CDS 25.0%
!! CCAGTCTTGTAAATAATTAA+TGG - chr8_4:54738489-54738508 None:intergenic 25.0%
! CCATTAATTATTTACAAGAC+TGG + chr8_4:54738486-54738505 Msa1334350:CDS 25.0%
! ATAAACTACGTGTAATATAG+TGG - chr8_4:54738952-54738971 None:intergenic 25.0%
! CAACAAATTTAGTGACTTAA+GGG - chr8_4:54738996-54739015 None:intergenic 25.0%
! TCAACAAATTTAGTGACTTA+AGG - chr8_4:54738997-54739016 None:intergenic 25.0%
!! TTTTAACCTACCATAAGATA+TGG - chr8_4:54739083-54739102 None:intergenic 25.0%
! AAGAGATATTTAGAGGTAAA+TGG - chr8_4:54739112-54739131 None:intergenic 25.0%
! GACTATTAAGAGATATTTAG+AGG - chr8_4:54739119-54739138 None:intergenic 25.0%
! CTAAATATCTCTTAATAGTC+TGG + chr8_4:54739119-54739138 Msa1334350:intron 25.0%
! CCACTATAGAAAAAGATAAT+AGG - chr8_4:54739269-54739288 None:intergenic 25.0%
!! CCTATTATCTTTTTCTATAG+TGG + chr8_4:54739266-54739285 Msa1334350:intron 25.0%
! TTCAAGTATTAAACAACTCA+AGG + chr8_4:54739495-54739514 Msa1334350:intron 25.0%
!! TAGTGTAAAATAAAGTGTCT+TGG + chr8_4:54739816-54739835 Msa1334350:intron 25.0%
! TTACATGAATGCTTTCAAAT+TGG - chr8_4:54739842-54739861 None:intergenic 25.0%
! TAACCTGATAACATATTTAG+AGG - chr8_4:54739871-54739890 None:intergenic 25.0%
!! AACACAGTCTAAATATTTTG+GGG - chr8_4:54740030-54740049 None:intergenic 25.0%
!! CAAACACAGTCTAAATATTT+TGG - chr8_4:54740032-54740051 None:intergenic 25.0%
! TCATGATGTAATTAATACTG+TGG + chr8_4:54740063-54740082 Msa1334350:intron 25.0%
! CATGATGTAATTAATACTGT+GGG + chr8_4:54740064-54740083 Msa1334350:intron 25.0%
! GAAAAAATACATTACCATTG+AGG - chr8_4:54740240-54740259 None:intergenic 25.0%
!! ATTTTTCTTTCATTGCTCTT+TGG + chr8_4:54740349-54740368 Msa1334350:intron 25.0%
!!! ATGAGTGTTATTTTATTCTG+TGG + chr8_4:54740374-54740393 Msa1334350:intron 25.0%
! ACATACAAATCCATAATTGA+CGG + chr8_4:54740587-54740606 Msa1334350:intron 25.0%
! ACTTAAAGTTAACAATTCAC+AGG - chr8_4:54740705-54740724 None:intergenic 25.0%
!!! AATTAATGTGGGCTTTTTTT+AGG - chr8_4:54740909-54740928 None:intergenic 25.0%
!!! AAGCCCACATTAATTTTTTT+TGG + chr8_4:54740914-54740933 Msa1334350:intron 25.0%
!!! AGCCCACATTAATTTTTTTT+GGG + chr8_4:54740915-54740934 Msa1334350:intron 25.0%
!!! ATTCCGGTAAATTTTTTTTC+TGG + chr8_4:54740945-54740964 Msa1334350:intron 25.0%
!!! TTCCGGTAAATTTTTTTTCT+GGG + chr8_4:54740946-54740965 Msa1334350:intron 25.0%
!! TCTGGGGTAAAAAAAATTTA+CGG + chr8_4:54740963-54740982 Msa1334350:intron 25.0%
!!! TTTTTTGGGGTAAAAAATTC+CGG + chr8_4:54740992-54741011 Msa1334350:intron 25.0%
!!! ACGGTACAAAACTTTTTTTT+TGG + chr8_4:54741048-54741067 Msa1334350:intron 25.0%
!!! CGGTACAAAACTTTTTTTTT+GGG + chr8_4:54741049-54741068 Msa1334350:intron 25.0%
!!! GGTACAAAACTTTTTTTTTG+GGG + chr8_4:54741050-54741069 Msa1334350:intron 25.0%
!!! TTTTTGGGGTAAAAAAATTC+CGG + chr8_4:54741064-54741083 Msa1334350:intron 25.0%
!!! ATTCCGGTAAATTTTTTTTC+TGG + chr8_4:54740945-54740964 Msa1334350:intron 25.0%
!!! TTCCGGTAAATTTTTTTTCT+GGG + chr8_4:54740946-54740965 Msa1334350:intron 25.0%
! GAATATGGACATTAATATCA+TGG - chr8_4:54741498-54741517 None:intergenic 25.0%
!! AATTATAGCTTGGTATTTTC+GGG - chr8_4:54741534-54741553 None:intergenic 25.0%
!!! ATTTTCTTGGATGGATTTAT+GGG - chr8_4:54741566-54741585 None:intergenic 25.0%
!!! AATTTTCTTGGATGGATTTA+TGG - chr8_4:54741567-54741586 None:intergenic 25.0%
! ATAAATCCATCCAAGAAAAT+TGG + chr8_4:54741566-54741585 Msa1334350:CDS 25.0%
! TAAATCCATCCAAGAAAATT+GGG + chr8_4:54741567-54741586 Msa1334350:CDS 25.0%
! TAATATAAGACTGCAAAAAG+TGG - chr8_4:54741662-54741681 None:intergenic 25.0%
!!! TCATCTAGAAATTTTAACCA+TGG - chr8_4:54741859-54741878 None:intergenic 25.0%
!!! TTGGTATTATTTTGTTGTGT+TGG + chr8_4:54741894-54741913 Msa1334350:intron 25.0%
! CACGTAAAAAAGAAAATGAA+TGG - chr8_4:54742151-54742170 None:intergenic 25.0%
!! TTTTCAAATCACATAACAAG+GGG + chr8_4:54742200-54742219 Msa1334350:three_prime_UTR 25.0%
! AAATGACAGTACACATTATT+AGG - chr8_4:54742445-54742464 None:intergenic 25.0%
TTCAATTCTTTCTCATCTTG+TGG + chr8_4:54735944-54735963 Msa1334350:intron 30.0%
GCAATTATGCATGAATGATA+TGG + chr8_4:54736071-54736090 Msa1334350:intron 30.0%
! TTTTTCATTCTTTGTGTCAC+AGG + chr8_4:54736255-54736274 Msa1334350:intron 30.0%
TTATTTAGCCTAAAAGGTGA+TGG + chr8_4:54736279-54736298 Msa1334350:CDS 30.0%
TATTTAGCCTAAAAGGTGAT+GGG + chr8_4:54736280-54736299 Msa1334350:CDS 30.0%
ATAAGAAAATCCACCTTCTT+AGG - chr8_4:54736516-54736535 None:intergenic 30.0%
TTCTCCTAAATAACACTTTC+TGG + chr8_4:54736627-54736646 Msa1334350:intron 30.0%
ATGTACACAACTATGCTATA+AGG - chr8_4:54736691-54736710 None:intergenic 30.0%
ATTACACTAACCAAACAGAA+AGG + chr8_4:54736858-54736877 Msa1334350:intron 30.0%
AAAATGAAATCTGAACACCA+TGG - chr8_4:54736909-54736928 None:intergenic 30.0%
!! AGATTGATGATGTTAAAGCA+TGG + chr8_4:54736979-54736998 Msa1334350:CDS 30.0%
AGCAGTAACGAGTAATTATA+AGG - chr8_4:54737139-54737158 None:intergenic 30.0%
AAGATCTTGGACATATGATT+TGG + chr8_4:54737194-54737213 Msa1334350:intron 30.0%
AGATCTTGGACATATGATTT+GGG + chr8_4:54737195-54737214 Msa1334350:intron 30.0%
AAATTGGTAGAAGACATTGT+TGG + chr8_4:54737304-54737323 Msa1334350:CDS 30.0%
TGGATAAATTAGTGGCAAAA+AGG - chr8_4:54737338-54737357 None:intergenic 30.0%
TAATTTATCCATATGAGCCA+TGG + chr8_4:54737347-54737366 Msa1334350:CDS 30.0%
TGCAAAAACAAACATGTAAG+TGG + chr8_4:54737393-54737412 Msa1334350:intron 30.0%
AATGTATGTTATAGACAGAC+TGG + chr8_4:54737472-54737491 Msa1334350:intron 30.0%
ACACATTTAACAGAATGATG+TGG - chr8_4:54737638-54737657 None:intergenic 30.0%
GAGTTATATCAAGTACACAT+TGG - chr8_4:54737694-54737713 None:intergenic 30.0%
CTTGATATAACTCGCAAATT+AGG + chr8_4:54737701-54737720 Msa1334350:intron 30.0%
TCATTTATGCATTTGTTCCT+AGG - chr8_4:54737813-54737832 None:intergenic 30.0%
CATGTGATTCTGATATATGA+GGG - chr8_4:54737856-54737875 None:intergenic 30.0%
GATGCAAACTAATTTCTTTC+AGG + chr8_4:54738364-54738383 Msa1334350:intron 30.0%
! CAAACTAATTTCTTTCAGGT+TGG + chr8_4:54738368-54738387 Msa1334350:intron 30.0%
! TTCACCCTCTTTATTTCATT+TGG - chr8_4:54738423-54738442 None:intergenic 30.0%
TATTTACAAGACTGGAATCA+TGG + chr8_4:54738494-54738513 Msa1334350:CDS 30.0%
ATTTACAAGACTGGAATCAT+GGG + chr8_4:54738495-54738514 Msa1334350:CDS 30.0%
AAAATCCAGTGACTGTTTAT+TGG - chr8_4:54738680-54738699 None:intergenic 30.0%
TTTAAAGAGTAATCAGTCAC+TGG + chr8_4:54738704-54738723 Msa1334350:intron 30.0%
GAACAATATAAAACTATCCC+TGG + chr8_4:54738828-54738847 Msa1334350:intron 30.0%
!! TCATCTTGCTCTAAATTTTC+CGG - chr8_4:54738873-54738892 None:intergenic 30.0%
! GAAAATTTAGAGCAAGATGA+GGG + chr8_4:54738873-54738892 Msa1334350:intron 30.0%
AATTAGATCCATCGTTTGTA+GGG - chr8_4:54738920-54738939 None:intergenic 30.0%
AAATTAGATCCATCGTTTGT+AGG - chr8_4:54738921-54738940 None:intergenic 30.0%
AGATAATAGGATACTGTCTT+GGG - chr8_4:54739256-54739275 None:intergenic 30.0%
AAGATAATAGGATACTGTCT+TGG - chr8_4:54739257-54739276 None:intergenic 30.0%
ACCATTGAATGCATTTATAG+CGG - chr8_4:54739332-54739351 None:intergenic 30.0%
AAGCCTCTAAATATGTTATC+AGG + chr8_4:54739865-54739884 Msa1334350:intron 30.0%
!! AACGGTTTGGTAAAACATAA+AGG - chr8_4:54739901-54739920 None:intergenic 30.0%
! TTATGTTTTACCAAACCGTT+AGG + chr8_4:54739901-54739920 Msa1334350:intron 30.0%
!!! ATTTTTCAGGTACAACCTAA+CGG - chr8_4:54739919-54739938 None:intergenic 30.0%
!! AGCATGATAACGTATTTTTC+AGG - chr8_4:54739932-54739951 None:intergenic 30.0%
!! ACACAGTCTAAATATTTTGG+GGG - chr8_4:54740029-54740048 None:intergenic 30.0%
! CATTCTTCTGAGTTTTTGAA+TGG - chr8_4:54740171-54740190 None:intergenic 30.0%
CATTCAAAAACTCAGAAGAA+TGG + chr8_4:54740169-54740188 Msa1334350:CDS 30.0%
TTCTTTGCATTTGCACATTA+AGG + chr8_4:54740430-54740449 Msa1334350:intron 30.0%
CATTTGCACATTAAGGAAAA+AGG + chr8_4:54740437-54740456 Msa1334350:intron 30.0%
TCGAGAATGTTTACTATCTA+CGG + chr8_4:54740501-54740520 Msa1334350:intron 30.0%
! ATTAGGGGCTTTAATTTAGT+GGG - chr8_4:54740834-54740853 None:intergenic 30.0%
! AATTAGGGGCTTTAATTTAG+TGG - chr8_4:54740835-54740854 None:intergenic 30.0%
!!! TCCGGTAAATTTTTTTTCTG+GGG + chr8_4:54740947-54740966 Msa1334350:intron 30.0%
ACCCCAGAAAAAAAATTTAC+CGG - chr8_4:54740951-54740970 None:intergenic 30.0%
!!! ATTCCGGTAAATTTTTTCTC+TGG + chr8_4:54741008-54741027 Msa1334350:intron 30.0%
!!! TTCCGGTAAATTTTTTCTCT+GGG + chr8_4:54741009-54741028 Msa1334350:intron 30.0%
!!! TCCGGTAAATTTTTTTTCTG+GGG + chr8_4:54740947-54740966 Msa1334350:intron 30.0%
ACCCCAGAAAAAAAATTTAC+CGG - chr8_4:54740951-54740970 None:intergenic 30.0%
!!! TTTATAGAAATTTTGGGGCT+TGG + chr8_4:54741199-54741218 Msa1334350:intron 30.0%
!!! TTATAGAAATTTTGGGGCTT+GGG + chr8_4:54741200-54741219 Msa1334350:intron 30.0%
TTTGAAGAAATCATGAGAAG+GGG - chr8_4:54741388-54741407 None:intergenic 30.0%
! CTTTGAAGAAATCATGAGAA+GGG - chr8_4:54741389-54741408 None:intergenic 30.0%
! ACTTTGAAGAAATCATGAGA+AGG - chr8_4:54741390-54741409 None:intergenic 30.0%
! ATATAGCGGTTAGTCAATAT+TGG - chr8_4:54741439-54741458 None:intergenic 30.0%
GAAAAGAAGTCAGAATATAG+CGG - chr8_4:54741453-54741472 None:intergenic 30.0%
! ATTATAGCTTGGTATTTTCG+GGG - chr8_4:54741533-54741552 None:intergenic 30.0%
AAATCCATCCAAGAAAATTG+GGG + chr8_4:54741568-54741587 Msa1334350:CDS 30.0%
TATGCTTCATGAAAGAAATG+AGG + chr8_4:54741622-54741641 Msa1334350:intron 30.0%
ATGCTTCATGAAAGAAATGA+GGG + chr8_4:54741623-54741642 Msa1334350:intron 30.0%
!! TATCGAAAAGTATGTTTTGG+TGG - chr8_4:54741723-54741742 None:intergenic 30.0%
CTAACTAAACTCTAATTCCA+TGG + chr8_4:54741839-54741858 Msa1334350:intron 30.0%
! TTTTATGTATCAGAGTAGGT+AGG + chr8_4:54742121-54742140 Msa1334350:three_prime_UTR 30.0%
! ATCTGAACGTGATTTTTGTT+AGG + chr8_4:54742321-54742340 Msa1334350:three_prime_UTR 30.0%
! TCTGAACGTGATTTTTGTTA+GGG + chr8_4:54742322-54742341 Msa1334350:three_prime_UTR 30.0%
ATGCATAAACAGATGTCTAA+CGG + chr8_4:54742373-54742392 Msa1334350:three_prime_UTR 30.0%
! CTAACGGATAAAAAATCATG+TGG + chr8_4:54742389-54742408 Msa1334350:three_prime_UTR 30.0%
AGTTTATCTTTCAGAGAGAC+TGG + chr8_4:54735638-54735657 Msa1334350:five_prime_UTR 35.0%
GTTTATCTTTCAGAGAGACT+GGG + chr8_4:54735639-54735658 Msa1334350:five_prime_UTR 35.0%
TTGGAGTAATGAATTTGCAG+AGG - chr8_4:54735718-54735737 None:intergenic 35.0%
AAGAGTTGAAAGGAATGAGA+GGG - chr8_4:54735761-54735780 None:intergenic 35.0%
TAAGAGTTGAAAGGAATGAG+AGG - chr8_4:54735762-54735781 None:intergenic 35.0%
!!! ACGGTTTTGTTTGTTTTTGC+AGG + chr8_4:54735809-54735828 Msa1334350:intron 35.0%
!!! CGGTTTTGTTTGTTTTTGCA+GGG + chr8_4:54735810-54735829 Msa1334350:intron 35.0%
AGGAAGATGAATAGAATACC+AGG - chr8_4:54735894-54735913 None:intergenic 35.0%
!! AAAATGACATAACTCGGTGT+CGG - chr8_4:54736164-54736183 None:intergenic 35.0%
TGTCTATGTATGTGCTTCAT+AGG + chr8_4:54736215-54736234 Msa1334350:intron 35.0%
ACAGGCTTATTTAGCCTAAA+AGG + chr8_4:54736273-54736292 Msa1334350:intron 35.0%
!! GTGATGGGTTAATCCATAAA+GGG + chr8_4:54736295-54736314 Msa1334350:CDS 35.0%
AATGTAACATTGTCTGGAAG+CGG - chr8_4:54736471-54736490 None:intergenic 35.0%
CATTACTTCTCTTCCTAAGA+AGG + chr8_4:54736500-54736519 Msa1334350:CDS 35.0%
!! CACACCAGAAAGTGTTATTT+AGG - chr8_4:54736634-54736653 None:intergenic 35.0%
!! TTTCTGGTGTGTTTTCTTCT+TGG + chr8_4:54736643-54736662 Msa1334350:intron 35.0%
! TTCTGGTGTGTTTTCTTCTT+GGG + chr8_4:54736644-54736663 Msa1334350:intron 35.0%
CTTCTTGGGTAAGGATATTA+AGG + chr8_4:54736658-54736677 Msa1334350:intron 35.0%
ATATGTCCAAGATCTTCAAG+AGG - chr8_4:54737190-54737209 None:intergenic 35.0%
TCCTATAACAAAGAACTGTG+GGG - chr8_4:54737251-54737270 None:intergenic 35.0%
GTCCTATAACAAAGAACTGT+GGG - chr8_4:54737252-54737271 None:intergenic 35.0%
TGTCCTATAACAAAGAACTG+TGG - chr8_4:54737253-54737272 None:intergenic 35.0%
GGCTCATATGGATAAATTAG+TGG - chr8_4:54737346-54737365 None:intergenic 35.0%
AATGCATGAAGTGTGAAACT+TGG + chr8_4:54737510-54737529 Msa1334350:intron 35.0%
AACTCGCAAATTAGGAACAA+TGG + chr8_4:54737709-54737728 Msa1334350:intron 35.0%
ATTCAAAGGCTCTACAACAA+AGG + chr8_4:54737762-54737781 Msa1334350:intron 35.0%
ATATATGAGGGAGAGAGAAT+AGG - chr8_4:54737844-54737863 None:intergenic 35.0%
CCATGTGATTCTGATATATG+AGG - chr8_4:54737857-54737876 None:intergenic 35.0%
CCTCATATATCAGAATCACA+TGG + chr8_4:54737854-54737873 Msa1334350:intron 35.0%
! GTGCTGAAAGTGTAAAATTC+AGG + chr8_4:54737984-54738003 Msa1334350:intron 35.0%
!! TTGAGTCAAGTCCATTTTTG+AGG + chr8_4:54738177-54738196 Msa1334350:CDS 35.0%
AAAGAGGGTGAAGATAAGTT+TGG + chr8_4:54738431-54738450 Msa1334350:CDS 35.0%
! GTTTTCGCCTTTATAGCAAT+TGG + chr8_4:54738459-54738478 Msa1334350:CDS 35.0%
TCATGGGATGGATAAAATTC+TGG + chr8_4:54738511-54738530 Msa1334350:CDS 35.0%
! TAAAATTCTGGTTGATGCCA+TGG + chr8_4:54738523-54738542 Msa1334350:CDS 35.0%
! GGAAAATTTAGAGCAAGATG+AGG + chr8_4:54738872-54738891 Msa1334350:intron 35.0%
CACTGTGATTCCATATCTTA+TGG + chr8_4:54739070-54739089 Msa1334350:intron 35.0%
GTGATTCCATATCTTATGGT+AGG + chr8_4:54739074-54739093 Msa1334350:intron 35.0%
! GTCTGGTCTATAGTTTTTCT+TGG + chr8_4:54739136-54739155 Msa1334350:intron 35.0%
CATAGGAGCAACAATAAAGA+GGG - chr8_4:54739206-54739225 None:intergenic 35.0%
TCATAGGAGCAACAATAAAG+AGG - chr8_4:54739207-54739226 None:intergenic 35.0%
GATAATAGGATACTGTCTTG+GGG - chr8_4:54739255-54739274 None:intergenic 35.0%
! TATAGTGGAAGCTATCCTAT+AGG + chr8_4:54739281-54739300 Msa1334350:intron 35.0%
TTATAGTGAAGACGACCTAT+AGG - chr8_4:54739299-54739318 None:intergenic 35.0%
ATGCATTTATAGCGGCTATA+GGG - chr8_4:54739324-54739343 None:intergenic 35.0%
AATGCATTTATAGCGGCTAT+AGG - chr8_4:54739325-54739344 None:intergenic 35.0%
!! ACAGTCTAAATATTTTGGGG+GGG - chr8_4:54740027-54740046 None:intergenic 35.0%
!! CACAGTCTAAATATTTTGGG+GGG - chr8_4:54740028-54740047 None:intergenic 35.0%
AAGGATACCTCTTAGACATA+TGG - chr8_4:54740090-54740109 None:intergenic 35.0%
CATCTATGATTGAGAGCAAA+AGG - chr8_4:54740109-54740128 None:intergenic 35.0%
! GAGTTTTTGAATGGTATGTG+TGG - chr8_4:54740162-54740181 None:intergenic 35.0%
! ACATCCATGCGTCTTATTAA+CGG - chr8_4:54740295-54740314 None:intergenic 35.0%
AGAATGTTTACTATCTACGG+TGG + chr8_4:54740504-54740523 Msa1334350:intron 35.0%
ACAAATCCATAATTGACGGA+TGG + chr8_4:54740591-54740610 Msa1334350:intron 35.0%
AAGAGATTTACATGGACATC+GGG - chr8_4:54740681-54740700 None:intergenic 35.0%
CAAGAGATTTACATGGACAT+CGG - chr8_4:54740682-54740701 None:intergenic 35.0%
!! TCAAGTGGGCTTTGAAATTT+GGG - chr8_4:54740795-54740814 None:intergenic 35.0%
!! TTCAAGTGGGCTTTGAAATT+TGG - chr8_4:54740796-54740815 None:intergenic 35.0%
!! TTTAATTTAGTGGGCTTGGT+GGG - chr8_4:54740825-54740844 None:intergenic 35.0%
!!! AGTTGATTTTATAGTGGGCT+TGG - chr8_4:54740876-54740895 None:intergenic 35.0%
!!! TCCGGTAAATTTTTTCTCTG+GGG + chr8_4:54741010-54741029 Msa1334350:intron 35.0%
ACCCCAGAGAAAAAATTTAC+CGG - chr8_4:54741014-54741033 None:intergenic 35.0%
!!! TATAGAAATTTTGGGGCTTG+GGG + chr8_4:54741201-54741220 Msa1334350:intron 35.0%
TCATGATTTCTTCAAAGTGC+AGG + chr8_4:54741392-54741411 Msa1334350:intron 35.0%
! TTCTGACTTCTTTTCTGTAC+AGG + chr8_4:54741458-54741477 Msa1334350:intron 35.0%
!! TTGGTATTTTCGGGGATATA+TGG - chr8_4:54741525-54741544 None:intergenic 35.0%
! TTACCTTTCCCCAATTTTCT+TGG - chr8_4:54741579-54741598 None:intergenic 35.0%
CTGCAAAAAGTGGAAGAAAA+TGG - chr8_4:54741652-54741671 None:intergenic 35.0%
GGAAAAACAGTATCTGAATG+AGG + chr8_4:54741915-54741934 Msa1334350:intron 35.0%
TTTAGGAGCAACTTCATCAA+AGG - chr8_4:54742016-54742035 None:intergenic 35.0%
CTAATTGGACGAGATTCTTT+AGG - chr8_4:54742033-54742052 None:intergenic 35.0%
ATGCCTGATTATGCCTAATT+AGG + chr8_4:54742069-54742088 Msa1334350:exon 35.0%
TGCATGAAAATAAGCCAACT+TGG - chr8_4:54742096-54742115 None:intergenic 35.0%
CATAACAAGGGGAAATTACT+TGG + chr8_4:54742211-54742230 Msa1334350:three_prime_UTR 35.0%
! TCAAATTCAAAACTGGCCTC+TGG - chr8_4:54735845-54735864 None:intergenic 40.0%
ATTTCTGCTCATTACTCACC+TGG + chr8_4:54735873-54735892 Msa1334350:CDS 40.0%
TGCTAATGCATGCAATGCAA+TGG + chr8_4:54736020-54736039 Msa1334350:intron 40.0%
GCTAATGCATGCAATGCAAT+GGG + chr8_4:54736021-54736040 Msa1334350:intron 40.0%
CTAATGCATGCAATGCAATG+GGG + chr8_4:54736022-54736041 Msa1334350:intron 40.0%
!! GATTAGACGTGTACTGGTTT+CGG + chr8_4:54736125-54736144 Msa1334350:intron 40.0%
! GGATTAACCCATCACCTTTT+AGG - chr8_4:54736290-54736309 None:intergenic 40.0%
!! GGTGATGGGTTAATCCATAA+AGG + chr8_4:54736294-54736313 Msa1334350:CDS 40.0%
GGTTAATCCATAAAGGGTTC+AGG + chr8_4:54736301-54736320 Msa1334350:CDS 40.0%
TTTGTTGCCTGAACCCTTTA+TGG - chr8_4:54736311-54736330 None:intergenic 40.0%
AGTTACAGTTATACGAGCTG+TGG + chr8_4:54736359-54736378 Msa1334350:CDS 40.0%
!!! CGCTATGGTTTTGAGCAAAT+CGG + chr8_4:54736441-54736460 Msa1334350:CDS 40.0%
TACTTCTCTTCCTAAGAAGG+TGG + chr8_4:54736503-54736522 Msa1334350:intron 40.0%
! GTGTGTTTTCTTCTTGGGTA+AGG + chr8_4:54736649-54736668 Msa1334350:intron 40.0%
CTTCTCTCTCTCATAAAGTG+CGG - chr8_4:54736751-54736770 None:intergenic 40.0%
!! TTATGATTTCTAAAGCGCCC+TGG + chr8_4:54737045-54737064 Msa1334350:CDS 40.0%
TCTTCTCCTCTTGAAGATCT+TGG + chr8_4:54737181-54737200 Msa1334350:intron 40.0%
AGAAGACATTGTTGGAACTC+TGG + chr8_4:54737312-54737331 Msa1334350:CDS 40.0%
TTAAATCGCCATGGCTCATA+TGG - chr8_4:54737358-54737377 None:intergenic 40.0%
TTGTCATGCTTAAATCGCCA+TGG - chr8_4:54737367-54737386 None:intergenic 40.0%
TCAGAATCACATGGAATCCA+TGG + chr8_4:54737863-54737882 Msa1334350:intron 40.0%
CCATATGGAAAGTCTATACG+AGG - chr8_4:54737940-54737959 None:intergenic 40.0%
CCTCGTATAGACTTTCCATA+TGG + chr8_4:54737937-54737956 Msa1334350:intron 40.0%
CGTATAGACTTTCCATATGG+TGG + chr8_4:54737940-54737959 Msa1334350:intron 40.0%
ATAGAAGCAACTCCACCATA+TGG - chr8_4:54737955-54737974 None:intergenic 40.0%
CTATATCCTCAGTGCATACA+TGG - chr8_4:54738065-54738084 None:intergenic 40.0%
GGTTGAAAGAAGATACTGCT+TGG + chr8_4:54738132-54738151 Msa1334350:intron 40.0%
ATAGACATCCAGCAACGAAA+TGG - chr8_4:54738227-54738246 None:intergenic 40.0%
ATGTCTATAGCTCACTGGTA+TGG + chr8_4:54738239-54738258 Msa1334350:intron 40.0%
TCGCCTTTATAGCAATTGGA+TGG + chr8_4:54738463-54738482 Msa1334350:CDS 40.0%
TGGCCATCCAATTGCTATAA+AGG - chr8_4:54738469-54738488 None:intergenic 40.0%
!! TATTGGCTTCGTCTCTATCT+AGG - chr8_4:54738663-54738682 None:intergenic 40.0%
CATGTTCGGAGAATACTCAT+AGG - chr8_4:54739223-54739242 None:intergenic 40.0%
TGCATTTATAGCGGCTATAG+GGG - chr8_4:54739323-54739342 None:intergenic 40.0%
GCCGCTATAAATGCATTCAA+TGG + chr8_4:54739328-54739347 Msa1334350:intron 40.0%
!! CAGTCTAAATATTTTGGGGG+GGG - chr8_4:54740026-54740045 None:intergenic 40.0%
ATAGATGAGCACTTTCACCA+TGG + chr8_4:54740122-54740141 Msa1334350:intron 40.0%
TTCATTGTGCTTACCCTCAA+TGG + chr8_4:54740223-54740242 Msa1334350:CDS 40.0%
GTTAATAAGACGCATGGATG+TGG + chr8_4:54740294-54740313 Msa1334350:intron 40.0%
GAGATACCATCCGTCAATTA+TGG - chr8_4:54740600-54740619 None:intergenic 40.0%
! TAATTGACGGATGGTATCTC+AGG + chr8_4:54740600-54740619 Msa1334350:intron 40.0%
TCACAGGCAAGAGATTTACA+TGG - chr8_4:54740689-54740708 None:intergenic 40.0%
!! CAAGTGGGCTTTGAAATTTG+GGG - chr8_4:54740794-54740813 None:intergenic 40.0%
!! TTAATTTAGTGGGCTTGGTG+GGG - chr8_4:54740824-54740843 None:intergenic 40.0%
!! CTTTAATTTAGTGGGCTTGG+TGG - chr8_4:54740826-54740845 None:intergenic 40.0%
!!! ATAGAAATTTTGGGGCTTGG+GGG + chr8_4:54741202-54741221 Msa1334350:intron 40.0%
TTAGAGCCGTCAATATCATG+GGG - chr8_4:54741330-54741349 None:intergenic 40.0%
GTTAGAGCCGTCAATATCAT+GGG - chr8_4:54741331-54741350 None:intergenic 40.0%
AGTTAGAGCCGTCAATATCA+TGG - chr8_4:54741332-54741351 None:intergenic 40.0%
GGTTTGCGAAATTAACTCGA+TGG + chr8_4:54741413-54741432 Msa1334350:intron 40.0%
GGGATATATGGTGTGGAATA+TGG - chr8_4:54741513-54741532 None:intergenic 40.0%
!! ATTTTCGGGGATATATGGTG+TGG - chr8_4:54741520-54741539 None:intergenic 40.0%
GCTGCTCGTAAATTATAGCT+TGG - chr8_4:54741544-54741563 None:intergenic 40.0%
! CTTTCCCCAATTTTCTTGGA+TGG - chr8_4:54741575-54741594 None:intergenic 40.0%
CATCCAAGAAAATTGGGGAA+AGG + chr8_4:54741573-54741592 Msa1334350:CDS 40.0%
AGTATCTGAATGAGGCTAGT+TGG + chr8_4:54741923-54741942 Msa1334350:intron 40.0%
! TGAATGAGGCTAGTTGGAAT+TGG + chr8_4:54741929-54741948 Msa1334350:CDS 40.0%
GGACCTAATTAGGCATAATC+AGG - chr8_4:54742075-54742094 None:intergenic 40.0%
ATGCCTAATTAGGTCCAAGT+TGG + chr8_4:54742079-54742098 Msa1334350:exon 40.0%
AAGCCAACTTGGACCTAATT+AGG - chr8_4:54742085-54742104 None:intergenic 40.0%
CTCGTTAAGTTCACGGTTTA+TGG + chr8_4:54742238-54742257 Msa1334350:three_prime_UTR 40.0%
!! AGCTCTGAGAGACATTCATT+AGG + chr8_4:54742278-54742297 Msa1334350:three_prime_UTR 40.0%
! TTTTGTTAGGGCAATCGCAT+TGG + chr8_4:54742334-54742353 Msa1334350:three_prime_UTR 40.0%
!! GAGAGAGAGTTGTTTGGTGT+GGG - chr8_4:54735597-54735616 None:intergenic 45.0%
! AGAGAGAGAGTTGTTTGGTG+TGG - chr8_4:54735598-54735617 None:intergenic 45.0%
GAGAGAGAGAGAGAGTTGTT+TGG - chr8_4:54735603-54735622 None:intergenic 45.0%
TCCTCAGATTAGACGTGTAC+TGG + chr8_4:54736119-54736138 Msa1334350:intron 45.0%
ACCAGTACACGTCTAATCTG+AGG - chr8_4:54736123-54736142 None:intergenic 45.0%
TATACGAGCTGTGGCAATTC+CGG + chr8_4:54736368-54736387 Msa1334350:CDS 45.0%
AAACAGCTAGCAGAACGCTA+TGG + chr8_4:54736426-54736445 Msa1334350:CDS 45.0%
CGCACTTTATGAGAGAGAGA+AGG + chr8_4:54736749-54736768 Msa1334350:intron 45.0%
GAAGACAGGTCCTTTCTGTT+TGG - chr8_4:54736871-54736890 None:intergenic 45.0%
! GTATCTACTTCCTCTGGCTT+GGG + chr8_4:54737067-54737086 Msa1334350:CDS 45.0%
GAGAAGATCTGTCGAGAGAT+AGG - chr8_4:54737168-54737187 None:intergenic 45.0%
! GCCCCACAGTTCTTTGTTAT+AGG + chr8_4:54737247-54737266 Msa1334350:intron 45.0%
GAACGCGTGTACATTGGAAA+AGG - chr8_4:54737666-54737685 None:intergenic 45.0%
TATGAGGGAGAGAGAATAGG+TGG - chr8_4:54737841-54737860 None:intergenic 45.0%
GTTAGTTAGCGAAGAGTCCA+TGG - chr8_4:54737883-54737902 None:intergenic 45.0%
ATACGAGGAGAAAGACAGCA+GGG - chr8_4:54737925-54737944 None:intergenic 45.0%
TATACGAGGAGAAAGACAGC+AGG - chr8_4:54737926-54737945 None:intergenic 45.0%
TAGCATCCATGTATGCACTG+AGG + chr8_4:54738056-54738075 Msa1334350:intron 45.0%
TCAAACTCATCCTGCCAAAC+AGG - chr8_4:54738161-54738180 None:intergenic 45.0%
GATATGGTCCATTTCGTTGC+TGG + chr8_4:54738216-54738235 Msa1334350:CDS 45.0%
ACAAGACTGGAATCATGGGA+TGG + chr8_4:54738499-54738518 Msa1334350:CDS 45.0%
! ATTCTGGTTGATGCCATGGT+TGG + chr8_4:54738527-54738546 Msa1334350:CDS 45.0%
! TTCTGGTTGATGCCATGGTT+GGG + chr8_4:54738528-54738547 Msa1334350:CDS 45.0%
ATGGTTGGGCTATCACTTCT+GGG + chr8_4:54738542-54738561 Msa1334350:CDS 45.0%
CGAAGCCAATAAACAGTCAC+TGG + chr8_4:54738672-54738691 Msa1334350:intron 45.0%
CCATCGTTTGTAGGGAATCA+GGG - chr8_4:54738912-54738931 None:intergenic 45.0%
TCCATCGTTTGTAGGGAATC+AGG - chr8_4:54738913-54738932 None:intergenic 45.0%
TCACCTTGTGCGATAAAGCA+TGG - chr8_4:54739027-54739046 None:intergenic 45.0%
ATGCTTTATCGCACAAGGTG+AGG + chr8_4:54739026-54739045 Msa1334350:intron 45.0%
GAGAATAGTGCAACACCTAC+AGG - chr8_4:54739172-54739191 None:intergenic 45.0%
GTGTTGCACTATTCTCCATC+TGG + chr8_4:54739176-54739195 Msa1334350:intron 45.0%
AATAAAGAGGGCTGACCAGA+TGG - chr8_4:54739194-54739213 None:intergenic 45.0%
ATAGGATACTGTCTTGGGGT+GGG - chr8_4:54739251-54739270 None:intergenic 45.0%
AATAGGATACTGTCTTGGGG+TGG - chr8_4:54739252-54739271 None:intergenic 45.0%
TCAGGTACAACCTAACGGTT+TGG - chr8_4:54739914-54739933 None:intergenic 45.0%
TGGTGCAGTATGATGTACCA+TGG - chr8_4:54740142-54740161 None:intergenic 45.0%
CTTGCCGTTAATAAGACGCA+TGG + chr8_4:54740288-54740307 Msa1334350:intron 45.0%
!! TAATTTAGTGGGCTTGGTGG+GGG - chr8_4:54740823-54740842 None:intergenic 45.0%
!! GGGCTTTAATTTAGTGGGCT+TGG - chr8_4:54740829-54740848 None:intergenic 45.0%
TTTGTGGGCTTGCATCAATG+TGG + chr8_4:54741241-54741260 Msa1334350:intron 45.0%
TTGTGGGCTTGCATCAATGT+GGG + chr8_4:54741242-54741261 Msa1334350:intron 45.0%
TTTCAAGCCCCCTTACTATG+TGG + chr8_4:54741283-54741302 Msa1334350:intron 45.0%
TTCAAGCCCCCTTACTATGT+GGG + chr8_4:54741284-54741303 Msa1334350:intron 45.0%
! ATCATGGGGCCTTGAAGTTT+TGG - chr8_4:54741316-54741335 None:intergenic 45.0%
TCAAGGCCCCATGATATTGA+CGG + chr8_4:54741321-54741340 Msa1334350:intron 45.0%
CACAGACAAATCTGCATGAC+TGG - chr8_4:54741782-54741801 None:intergenic 45.0%
TGGAGCTCTCGTTAAGTTCA+CGG + chr8_4:54742231-54742250 Msa1334350:three_prime_UTR 45.0%
!!! ATTTTTATAAAAGTAAAAAA+TGG + chr8_4:54738970-54738989 Msa1334350:intron 5.0%
!!! AAATATAATGATTTTATTAA+AGG + chr8_4:54739787-54739806 Msa1334350:intron 5.0%
GATCTGCGTCCACATTTGGA+GGG + chr8_4:54735570-54735589 Msa1334350:five_prime_UTR 50.0%
ATCTGCGTCCACATTTGGAG+GGG + chr8_4:54735571-54735590 Msa1334350:five_prime_UTR 50.0%
TCTTTCAGAGAGACTGGGAG+AGG + chr8_4:54735644-54735663 Msa1334350:five_prime_UTR 50.0%
CTTTCAGAGAGACTGGGAGA+GGG + chr8_4:54735645-54735664 Msa1334350:five_prime_UTR 50.0%
TTTCAGAGAGACTGGGAGAG+GGG + chr8_4:54735646-54735665 Msa1334350:five_prime_UTR 50.0%
TGCAGGGTTCTTCATTCCAG+AGG + chr8_4:54735826-54735845 Msa1334350:intron 50.0%
GCCAGAGGAAGTAGATACCA+GGG - chr8_4:54737065-54737084 None:intergenic 50.0%
AGCCAGAGGAAGTAGATACC+AGG - chr8_4:54737066-54737085 None:intergenic 50.0%
GGTATCTACTTCCTCTGGCT+TGG + chr8_4:54737066-54737085 Msa1334350:CDS 50.0%
CTGTGGGGCAAAAACGAAAG+AGG - chr8_4:54737236-54737255 None:intergenic 50.0%
GACAGAGAACGCGTGTACAT+TGG - chr8_4:54737672-54737691 None:intergenic 50.0%
ATCCAGAGTCACAGTCTCCT+AGG + chr8_4:54737793-54737812 Msa1334350:intron 50.0%
TTCCTAGGAGACTGTGACTC+TGG - chr8_4:54737798-54737817 None:intergenic 50.0%
ATACTGCTTGGCAGCCTGTT+TGG + chr8_4:54738144-54738163 Msa1334350:CDS 50.0%
GCTGGATGTCTATAGCTCAC+TGG + chr8_4:54738234-54738253 Msa1334350:CDS 50.0%
CAGAAGTGATAGCCCAACCA+TGG - chr8_4:54738543-54738562 None:intergenic 50.0%
CATGGTTGGGCTATCACTTC+TGG + chr8_4:54738541-54738560 Msa1334350:CDS 50.0%
GCATACAACGCATGCAACCA+GGG - chr8_4:54738848-54738867 None:intergenic 50.0%
AGCATACAACGCATGCAACC+AGG - chr8_4:54738849-54738868 None:intergenic 50.0%
TTGCATGCGTTGTATGCTGC+CGG + chr8_4:54738851-54738870 Msa1334350:intron 50.0%
CAAGATGAGGGAGTTCAGCA+GGG + chr8_4:54738885-54738904 Msa1334350:intron 50.0%
AAGATGAGGGAGTTCAGCAG+GGG + chr8_4:54738886-54738905 Msa1334350:intron 50.0%
CCCTGATTCCCTACAAACGA+TGG + chr8_4:54738909-54738928 Msa1334350:intron 50.0%
CAGCCATGCTTTATCGCACA+AGG + chr8_4:54739021-54739040 Msa1334350:intron 50.0%
CTTGGTCTCTCTCTACCTGT+AGG + chr8_4:54739154-54739173 Msa1334350:intron 50.0%
CTGTGGGCCATATGTCTAAG+AGG + chr8_4:54740080-54740099 Msa1334350:intron 50.0%
GCTGCACAAGCACAGCTTAA+TGG + chr8_4:54740195-54740214 Msa1334350:CDS 50.0%
!!! TGGTGGGGGCTTTTTCAAGT+GGG - chr8_4:54740809-54740828 None:intergenic 50.0%
!!! TTGGTGGGGGCTTTTTCAAG+TGG - chr8_4:54740810-54740829 None:intergenic 50.0%
TTCAGAGAGACTGGGAGAGG+GGG + chr8_4:54735647-54735666 Msa1334350:five_prime_UTR 55.0%
!! TCCACTGGAGCTGGTTCTAC+CGG - chr8_4:54736390-54736409 None:intergenic 55.0%
ACCAGCTCCAGTGGAAAGTG+CGG + chr8_4:54736395-54736414 Msa1334350:CDS 55.0%
CTGTACTCCGCACTTTCCAC+TGG - chr8_4:54736405-54736424 None:intergenic 55.0%
ATCAGCCACTTCCTATGCGC+TGG + chr8_4:54737016-54737035 Msa1334350:CDS 55.0%
TCAGCCACTTCCTATGCGCT+GGG + chr8_4:54737017-54737036 Msa1334350:CDS 55.0%
CATAAGAAGCCCCAGCGCAT+AGG - chr8_4:54737030-54737049 None:intergenic 55.0%
GCCCTGGTATCTACTTCCTC+TGG + chr8_4:54737061-54737080 Msa1334350:CDS 55.0%
!! TACTTCCTCTGGCTTGGGCT+TGG + chr8_4:54737072-54737091 Msa1334350:CDS 55.0%
TGGACAGGGACTGCTGTAAC+TGG + chr8_4:54737092-54737111 Msa1334350:CDS 55.0%
GGACAGGGACTGCTGTAACT+GGG + chr8_4:54737093-54737112 Msa1334350:CDS 55.0%
GACAGGGACTGCTGTAACTG+GGG + chr8_4:54737094-54737113 Msa1334350:CDS 55.0%
GGGAGAGAGAATAGGTGGCT+GGG - chr8_4:54737836-54737855 None:intergenic 55.0%
AGGGAGAGAGAATAGGTGGC+TGG - chr8_4:54737837-54737856 None:intergenic 55.0%
TAACTAGCCGTCTCCCCTTC+TGG + chr8_4:54737899-54737918 Msa1334350:intron 55.0%
AAAGACAGCAGGGCCAGAAG+GGG - chr8_4:54737915-54737934 None:intergenic 55.0%
GAAAGACAGCAGGGCCAGAA+GGG - chr8_4:54737916-54737935 None:intergenic 55.0%
AGAAAGACAGCAGGGCCAGA+AGG - chr8_4:54737917-54737936 None:intergenic 55.0%
GCAAGATGAGGGAGTTCAGC+AGG + chr8_4:54738884-54738903 Msa1334350:intron 55.0%
!! TGGGGTGGGTTGGACATGTT+CGG - chr8_4:54739237-54739256 None:intergenic 55.0%
GATACTGTCTTGGGGTGGGT+TGG - chr8_4:54739247-54739266 None:intergenic 55.0%
TCCGGTAGAACCAGCTCCAG+TGG + chr8_4:54736386-54736405 Msa1334350:CDS 60.0%
TCCGCACTTTCCACTGGAGC+TGG - chr8_4:54736399-54736418 None:intergenic 60.0%
CAGCCACTTCCTATGCGCTG+GGG + chr8_4:54737018-54737037 Msa1334350:CDS 60.0%
AAGCCCCAGCGCATAGGAAG+TGG - chr8_4:54737024-54737043 None:intergenic 60.0%
!! CTCTGGCTTGGGCTTGGACA+GGG + chr8_4:54737078-54737097 Msa1334350:CDS 60.0%
TGCTTGGCAGCCTGTTTGGC+AGG + chr8_4:54738148-54738167 Msa1334350:CDS 60.0%
AGCCCCCTTACTATGTGGGC+TGG + chr8_4:54741288-54741307 Msa1334350:intron 60.0%
GCCCCCTTACTATGTGGGCT+GGG + chr8_4:54741289-54741308 Msa1334350:intron 60.0%
CCCCAGCCCACATAGTAAGG+GGG - chr8_4:54741293-54741312 None:intergenic 60.0%
! CCCCCTTACTATGTGGGCTG+GGG + chr8_4:54741290-54741309 Msa1334350:intron 60.0%
GCCCCAGCCCACATAGTAAG+GGG - chr8_4:54741294-54741313 None:intergenic 60.0%
GGCCCCAGCCCACATAGTAA+GGG - chr8_4:54741295-54741314 None:intergenic 60.0%
TGGCCCCAGCCCACATAGTA+AGG - chr8_4:54741296-54741315 None:intergenic 60.0%
GGGCTGGGGCCAAAACTTCA+AGG + chr8_4:54741304-54741323 Msa1334350:intron 60.0%
GGTGTGGGCCCCTCCAAATG+TGG - chr8_4:54735582-54735601 None:intergenic 65.0%
CCTGTCCAAGCCCAAGCCAG+AGG - chr8_4:54737080-54737099 None:intergenic 65.0%
!! CCTCTGGCTTGGGCTTGGAC+AGG + chr8_4:54737077-54737096 Msa1334350:CDS 65.0%
AGCAGGGCCAGAAGGGGAGA+CGG - chr8_4:54737909-54737928 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 54735570 54742468 54735570 ID=Msa1334350;Name=Msa1334350
chr8_4 mRNA 54735570 54742468 54735570 ID=Msa1334350-mRNA-1;Parent=Msa1334350;Name=Msa1334350-mRNA-1;_AED=0.08;_eAED=0.08;_QI=135|1|1|1|1|1|10|382|446
chr8_4 exon 54735570 54735743 54735570 ID=Msa1334350-mRNA-1:exon:17033;Parent=Msa1334350-mRNA-1
chr8_4 exon 54735831 54735894 54735831 ID=Msa1334350-mRNA-1:exon:17034;Parent=Msa1334350-mRNA-1
chr8_4 exon 54736277 54736521 54736277 ID=Msa1334350-mRNA-1:exon:17035;Parent=Msa1334350-mRNA-1
chr8_4 exon 54736972 54737115 54736972 ID=Msa1334350-mRNA-1:exon:17036;Parent=Msa1334350-mRNA-1
chr8_4 exon 54737256 54737407 54737256 ID=Msa1334350-mRNA-1:exon:17037;Parent=Msa1334350-mRNA-1
chr8_4 exon 54738133 54738255 54738133 ID=Msa1334350-mRNA-1:exon:17038;Parent=Msa1334350-mRNA-1
chr8_4 exon 54738386 54738563 54738386 ID=Msa1334350-mRNA-1:exon:17039;Parent=Msa1334350-mRNA-1
chr8_4 exon 54740126 54740244 54740126 ID=Msa1334350-mRNA-1:exon:17040;Parent=Msa1334350-mRNA-1
chr8_4 exon 54741480 54741594 54741480 ID=Msa1334350-mRNA-1:exon:17041;Parent=Msa1334350-mRNA-1
chr8_4 exon 54741925 54742468 54741925 ID=Msa1334350-mRNA-1:exon:17042;Parent=Msa1334350-mRNA-1
chr8_4 five_prime_UTR 54735570 54735704 54735570 ID=Msa1334350-mRNA-1:five_prime_utr;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54735705 54735743 54735705 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54735831 54735894 54735831 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54736277 54736521 54736277 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54736972 54737115 54736972 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54737256 54737407 54737256 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54738133 54738255 54738133 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54738386 54738563 54738386 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54740126 54740244 54740126 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54741480 54741594 54741480 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 CDS 54741925 54742086 54741925 ID=Msa1334350-mRNA-1:cds;Parent=Msa1334350-mRNA-1
chr8_4 three_prime_UTR 54742087 54742468 54742087 ID=Msa1334350-mRNA-1:three_prime_utr;Parent=Msa1334350-mRNA-1
Gene Sequence

>Msa1334350

ATGGCTTGCACCTCTGCAAATTCATTACTCCAATTAAAGGGTTCTTCATTCCAGAGGCCAGTTTTGAATTTGAGAACAAACATTTCTGCTCATTACTCACCTGGCTTATTTAGCCTAAAAGGTGATGGGTTAATCCATAAAGGGTTCAGGCAACAAAGTCAAAAACATTTGATACCTAGAAATAAAGTTACAGTTATACGAGCTGTGGCAATTCCGGTAGAACCAGCTCCAGTGGAAAGTGCGGAGTACAGAAAACAGCTAGCAGAACGCTATGGTTTTGAGCAAATCGGAGAGCCGCTTCCAGACAATGTTACATTAAAAGATGTCATTACTTCTCTTCCTAAGAAGGTTTTTGAGATTGATGATGTTAAAGCATGGAAGTCTGTTTTGATATCAGCCACTTCCTATGCGCTGGGGCTTCTTATGATTTCTAAAGCGCCCTGGTATCTACTTCCTCTGGCTTGGGCTTGGACAGGGACTGCTGTAACTGGGTTCTTTGTTATAGGACATGATTGCGCTCACAAATCATTTTCAACAAACAAATTGGTAGAAGACATTGTTGGAACTCTGGCCTTTTTGCCACTAATTTATCCATATGAGCCATGGCGATTTAAGCATGACAAACATCATGCAAAAACAAACATGTTGAAAGAAGATACTGCTTGGCAGCCTGTTTGGCAGGATGAGTTTGAGTCAAGTCCATTTTTGAGGAAAGCAATAATATATGGATATGGTCCATTTCGTTGCTGGATGTCTATAGCTCACTGGTTGGTCTCTCACTTCGATTTGAAGACGTTTAGACCAAATGAAATAAAGAGGGTGAAGATAAGTTTGGCTTGTGTTTTCGCCTTTATAGCAATTGGATGGCCATTAATTATTTACAAGACTGGAATCATGGGATGGATAAAATTCTGGTTGATGCCATGGTTGGGCTATCACTTCTGGATGAGCACTTTCACCATGGTACATCATACTGCACCACACATACCATTCAAAAACTCAGAAGAATGGAATGCTGCACAAGCACAGCTTAATGGAACTGTTCATTGTGCTTACCCTCAATGGATCGAGATCTTATGCCATGATATTAATGTCCATATTCCACACCATATATCCCCGAAAATACCAAGCTATAATTTACGAGCAGCCCATAAATCCATCCAAGAAAATTGGGGAAAGTATCTGAATGAGGCTAGTTGGAATTGGCGATTGATGAAGACAATCATGACAGTGTGTCATGTGTACGATAAGCAGCAAAATTATGTCTCCTTTGATGAAGTTGCTCCTAAAGAATCTCGTCCAATTAGATTTTTGAAGAAAGTAATGCCTGATTATGCCTAA

Protein sequence

>Msa1334350

MACTSANSLLQLKGSSFQRPVLNLRTNISAHYSPGLFSLKGDGLIHKGFRQQSQKHLIPRNKVTVIRAVAIPVEPAPVESAEYRKQLAERYGFEQIGEPLPDNVTLKDVITSLPKKVFEIDDVKAWKSVLISATSYALGLLMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLKEDTAWQPVWQDEFESSPFLRKAIIYGYGPFRCWMSIAHWLVSHFDLKTFRPNEIKRVKISLACVFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKNSEEWNAAQAQLNGTVHCAYPQWIEILCHDINVHIPHHISPKIPSYNLRAAHKSIQENWGKYLNEASWNWRLMKTIMTVCHVYDKQQNYVSFDEVAPKESRPIRFLKKVMPDYA*