AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0424940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424940 MtrunA17_Chr3g0126911 91.892 666 32 5 1 655 1 655 0.0 1249
Msa0424940 MtrunA17_Chr6g0453261 48.532 511 229 8 142 645 268 751 3.22e-157 471
Msa0424940 MtrunA17_Chr8g0345941 40.338 533 270 15 134 645 83 588 2.51e-111 348
Msa0424940 MtrunA17_Chr1g0189131 39.388 523 273 12 142 645 83 580 7.43e-106 333
Msa0424940 MtrunA17_Chr4g0051911 32.031 512 308 15 143 644 484 965 2.00e-61 221
Msa0424940 MtrunA17_Chr2g0288461 30.814 516 271 18 142 644 659 1101 1.45e-50 189
Msa0424940 MtrunA17_Chr5g0411441 24.437 577 350 22 82 635 145 658 2.09e-25 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424940 AT5G24300.2 69.052 601 167 5 68 655 57 651 0.0 858
Msa0424940 AT5G24300.1 69.052 601 167 5 68 655 57 651 0.0 858
Msa0424940 AT3G01180.1 49.315 511 225 8 142 645 302 785 2.19e-163 488
Msa0424940 AT1G32900.1 39.579 523 272 13 142 645 85 582 1.22e-101 323
Msa0424940 AT4G18240.1 33.006 509 307 13 143 644 544 1025 1.12e-65 234
Msa0424940 AT1G11720.1 31.518 514 269 18 142 644 595 1036 1.88e-52 195
Msa0424940 AT1G11720.2 31.518 514 269 18 142 644 647 1088 2.13e-52 195

Find 231 sgRNAs with CRISPR-Local

Find 632 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATTACATATTGCAATT+TGG 0.109574 3_2:+75299912 Msa0424940:CDS
GCCACCTTGCGTTCTATTTC+CGG 0.159502 3_2:+75295776 Msa0424940:CDS
TATTCTGCTGACGACCTTTC+TGG 0.160892 3_2:+75301293 Msa0424940:CDS
CAGAAACTCAAGGGAATTTA+AGG 0.192171 3_2:+75296768 Msa0424940:CDS
TCCAGAGAGATTGATGATTT+TGG 0.193799 3_2:+75295878 Msa0424940:CDS
CGCTTGACTCCTCATGATTC+TGG 0.202062 3_2:+75295917 Msa0424940:CDS
GCAATTACATATTGCAATTT+GGG 0.229733 3_2:+75299913 Msa0424940:CDS
GAATCAAGTCAATACCTTTC+TGG 0.244261 3_2:-75301564 None:intergenic
CTCTTTCCATATCTAATTCA+TGG 0.252798 3_2:+75295467 Msa0424940:five_prime_UTR
AGACAAGCACGGGACGTTTA+AGG 0.276845 3_2:+75297314 Msa0424940:CDS
TCATATCTGCTTTCAGCAAT+AGG 0.289960 3_2:-75303345 None:intergenic
CCAAAGCAAAATACATTGAT+AGG 0.297203 3_2:-75297043 None:intergenic
TTGTTTGCAATTTGCATAGA+TGG 0.304464 3_2:+75303868 Msa0424940:three_prime_UTR
CTCACGATTCTTACCGCAAT+TGG 0.320425 3_2:+75295727 Msa0424940:CDS
CATAAGGATTCCCTGGTCTA+TGG 0.321028 3_2:-75297290 None:intergenic
GATACTGTATTGCAGACTTT+TGG 0.333460 3_2:+75297866 Msa0424940:intron
CCTCCCAATGGAAGCACTAA+TGG 0.338684 3_2:-75297481 None:intergenic
TTAGATATGGAAAGAGAAAA+AGG 0.344603 3_2:-75295460 None:intergenic
TTCCTTCCTTCCTTCTCTCA+TGG 0.345249 3_2:+75295622 Msa0424940:exon
CATAGACCAGGGAATCCTTA+TGG 0.351574 3_2:+75297291 Msa0424940:CDS
TATTATATCTTACCCTTGTT+GGG 0.355174 3_2:+75303577 Msa0424940:three_prime_UTR
ATATTATATCTTACCCTTGT+TGG 0.357626 3_2:+75303576 Msa0424940:three_prime_UTR
CTCCCAATGGAAGCACTAAT+GGG 0.365771 3_2:-75297480 None:intergenic
ATACCAGTAGTTCATGAAAC+AGG 0.367040 3_2:+75302570 Msa0424940:CDS
ATTGCCTTGCAGAAGGAGTT+AGG 0.367443 3_2:+75301414 Msa0424940:CDS
AATCATTGAGTGGGCATTCA+TGG 0.370383 3_2:+75303316 Msa0424940:CDS
TCTTCTGCATTCCCAATCTC+TGG 0.372149 3_2:-75296809 None:intergenic
GTTAGCAAGGAGGGATTTGC+TGG 0.376689 3_2:+75303943 Msa0424940:three_prime_UTR
TAAAGATAAATTTCGTGGTT+GGG 0.379084 3_2:+75302284 Msa0424940:CDS
CATATCTGCTTTCAGCAATA+GGG 0.379828 3_2:-75303344 None:intergenic
GCCTATTCCTCGTTAATGAT+TGG 0.380274 3_2:+75297524 Msa0424940:CDS
TGGGATGGGTATTCCCTACT+TGG 0.385282 3_2:+75299962 Msa0424940:CDS
TCGTCCACATGGGGTATATA+AGG 0.386432 3_2:+75297899 Msa0424940:CDS
CAGTTGTATGCAATGAGATA+TGG 0.386711 3_2:+75302543 Msa0424940:CDS
CATATCTCATTGCATACAAC+TGG 0.389447 3_2:-75302542 None:intergenic
TGATCATCTTCGAAGGAAAT+AGG 0.395191 3_2:-75295836 None:intergenic
CGATCCCTTTCCTCCTGCAT+TGG 0.395657 3_2:+75295597 Msa0424940:five_prime_UTR
CCGCGACCCGCCAGTGCTAT+TGG 0.397516 3_2:-75296935 None:intergenic
AAATTGCAATATGTAATTGC+AGG 0.399672 3_2:-75299910 None:intergenic
GCAGTTATTCTATGAGATAC+TGG 0.400477 3_2:-75302321 None:intergenic
GCCTTCAGCATTGCATCCTT+CGG 0.400496 3_2:-75302727 None:intergenic
ACAACTACAGAAGGTGGATT+TGG 0.400949 3_2:+75300518 Msa0424940:CDS
TGCATACACTGAAACTAAAC+TGG 0.401674 3_2:-75297551 None:intergenic
CTCATCCAGTCTTCATATAT+AGG 0.407433 3_2:-75302243 None:intergenic
AAATTTCCACAGGGACTACT+TGG 0.407761 3_2:-75303633 None:intergenic
TTTCAGGTAATGCTTGGTTC+GGG 0.416000 3_2:+75302216 Msa0424940:intron
GATCAACCATGAATTAGATA+TGG 0.419127 3_2:-75295473 None:intergenic
ACCAAAATCATCAATCTCTC+TGG 0.423562 3_2:-75295879 None:intergenic
GCATCGCTTCCTCCAGCAAA+TGG 0.423925 3_2:-75302705 None:intergenic
TCAAGAATGGTATGGAGCAC+TGG 0.432494 3_2:+75299942 Msa0424940:CDS
ATAATGAACACAAGTCTTCA+TGG 0.432708 3_2:+75303225 Msa0424940:CDS
AATCGTGACCGAGTGATAAC+AGG 0.435316 3_2:+75303456 Msa0424940:three_prime_UTR
CCATTGGGAGGGTTCACTTA+CGG 0.438789 3_2:+75297493 Msa0424940:CDS
CGGGACGTTTAAGGATAATC+AGG 0.439356 3_2:+75297323 Msa0424940:CDS
CTGAAGAAGTGCGGGTATGA+TGG 0.440710 3_2:-75295673 None:intergenic
ATTCTGCTGACGACCTTTCT+GGG 0.441080 3_2:+75301294 Msa0424940:CDS
CTGTAAACAAGCTTGAGCTT+TGG 0.441205 3_2:+75303690 Msa0424940:three_prime_UTR
GAACTCACCACTGGACAATC+AGG 0.442879 3_2:-75301450 None:intergenic
GCCAATCATTAACGAGGAAT+AGG 0.443305 3_2:-75297525 None:intergenic
CTTTATAAAGATAAATTTCG+TGG 0.443734 3_2:+75302279 Msa0424940:CDS
GGTGGCCTTGCAGATGTTTG+TGG 0.444403 3_2:+75296905 Msa0424940:CDS
ATAGGTCCGTCTGGTGAAGC+AGG 0.444784 3_2:-75295818 None:intergenic
GGGTCGCGGACACCGTGTTA+TGG 0.449119 3_2:+75296949 Msa0424940:CDS
GATAAATTTCGTGGTTGGGT+TGG 0.449687 3_2:+75302288 Msa0424940:CDS
ACGAGCTCTCAACGGCGGTT+AGG 0.453333 3_2:+75303767 Msa0424940:three_prime_UTR
ACATATCTAGCCTTGATAAT+CGG 0.454953 3_2:-75303408 None:intergenic
GTGTTCATTATATGTTTGAA+TGG 0.457516 3_2:-75303213 None:intergenic
ATAAAGATAAATTTCGTGGT+TGG 0.461080 3_2:+75302283 Msa0424940:CDS
GAAAAGATGGCTTGCACAGA+TGG 0.464285 3_2:+75303898 Msa0424940:three_prime_UTR
AAGGTCGTCAGCAGAATAGT+TGG 0.464673 3_2:-75301288 None:intergenic
TGGTTCTTTGCCAATAGCAC+TGG 0.466231 3_2:+75296925 Msa0424940:CDS
GCAGTACCATGTACGTATCT+AGG 0.472827 3_2:-75296980 None:intergenic
GCAATATGTTCATCAGATGA+TGG 0.474624 3_2:-75301263 None:intergenic
CACCCTTCATTCCATAGACC+AGG 0.479990 3_2:+75297279 Msa0424940:CDS
AGAAGGTGGATTTGGTCTAC+AGG 0.480693 3_2:+75300526 Msa0424940:CDS
TATCGACCAGGGATCACAAA+TGG 0.487988 3_2:+75301218 Msa0424940:intron
GGATGCAATGCTGAAGGCAC+GGG 0.488330 3_2:+75302732 Msa0424940:CDS
TTCTGTAGTTGTTATCTCCC+AGG 0.489591 3_2:-75300507 None:intergenic
TGCTGACGACCTTTCTGGGA+AGG 0.490242 3_2:+75301298 Msa0424940:CDS
CAACACCTTCTCTATACTCA+TGG 0.490842 3_2:-75297090 None:intergenic
TTCCCTGGTCTATGGAATGA+AGG 0.492921 3_2:-75297282 None:intergenic
AGTATAGAGAAGGTGTTGAC+TGG 0.493004 3_2:+75297095 Msa0424940:CDS
CCTTCAACATTTGAGCCTTG+TGG 0.493172 3_2:+75302513 Msa0424940:CDS
AACTTGTAGATTGGATTCGT+TGG 0.494340 3_2:+75301529 Msa0424940:intron
GCCCCATTAGTGCTTCCATT+GGG 0.495903 3_2:+75297478 Msa0424940:CDS
TTGTCTCCATAAGGATTCCC+TGG 0.496184 3_2:-75297297 None:intergenic
CATTAGTGCTTCCATTGGGA+GGG 0.499927 3_2:+75297482 Msa0424940:CDS
CCATTAGTGCTTCCATTGGG+AGG 0.501841 3_2:+75297481 Msa0424940:CDS
TGGGGCTTCACATGCTGCAT+GGG 0.506777 3_2:-75297461 None:intergenic
GAAATCCTATATATGAAGAC+TGG 0.512634 3_2:+75302238 Msa0424940:CDS
CCAATAGCACTGGCGGGTCG+CGG 0.513395 3_2:+75296935 Msa0424940:CDS
GGAAGACTTGATTACCAGAA+AGG 0.515076 3_2:+75301550 Msa0424940:CDS
AAGACCAATGCAGGAGGAAA+GGG 0.515425 3_2:-75295601 None:intergenic
TATGTGCAACCCTCAACAAA+TGG 0.515991 3_2:-75303556 None:intergenic
GTCCCGTGCTTGTCTCCATA+AGG 0.516878 3_2:-75297306 None:intergenic
GACAAAGGAGAGCATGTTAG+TGG 0.517549 3_2:+75302961 Msa0424940:CDS
TTCTTTGCCAATAGCACTGG+CGG 0.517880 3_2:+75296928 Msa0424940:CDS
TCGAAGGAAATAGGTCCGTC+TGG 0.521679 3_2:-75295827 None:intergenic
TTTGGAGGCGCTCAAGAAGT+TGG 0.523145 3_2:+75297061 Msa0424940:CDS
ATCATGGATGTTAGCAAGGA+GGG 0.523356 3_2:+75303934 Msa0424940:three_prime_UTR
AGATGGAAATAATGAAAAGA+TGG 0.523416 3_2:+75303885 Msa0424940:three_prime_UTR
ACATCGTCTTGCATAAGCTC+TGG 0.524359 3_2:-75301598 None:intergenic
GGAAGCACCGTCAGTGTCAC+CGG 0.524701 3_2:-75295795 None:intergenic
GAGAGATTACACCTGGGAAA+AGG 0.525113 3_2:+75303274 Msa0424940:CDS
CAAAATCAACCTTCCCAGAA+AGG 0.526917 3_2:-75301307 None:intergenic
GAAGGAAGGAAGACCAATGC+AGG 0.527438 3_2:-75295610 None:intergenic
TGGAATTGATGTTACTGAAT+GGG 0.528155 3_2:+75301238 Msa0424940:CDS
GAAGACCAATGCAGGAGGAA+AGG 0.529061 3_2:-75295602 None:intergenic
ATGGGGCTTCACATGCTGCA+TGG 0.529447 3_2:-75297462 None:intergenic
ATGGAATTGATGTTACTGAA+TGG 0.529859 3_2:+75301237 Msa0424940:CDS
TTGATGAGAGTATTACATGC+AGG 0.531005 3_2:+75296737 Msa0424940:CDS
AGGTATTGACTTGATTCGCC+AGG 0.532994 3_2:+75301570 Msa0424940:CDS
CAAGAATGGTATGGAGCACT+GGG 0.534663 3_2:+75299943 Msa0424940:CDS
GCTTCCCCTGCTTCACCAGA+CGG 0.535866 3_2:+75295812 Msa0424940:CDS
GTATCTCATAGAATAACTGC+AGG 0.537384 3_2:+75302324 Msa0424940:CDS
AGCCCCATTAGTGCTTCCAT+TGG 0.538320 3_2:+75297477 Msa0424940:CDS
CAATTACATATTGCAATTTG+GGG 0.539126 3_2:+75299914 Msa0424940:CDS
TTGGTATGAGAAGGTCGAGT+TGG 0.539638 3_2:-75295698 None:intergenic
AGGCCACCAGTCTTAGAATA+CGG 0.539910 3_2:-75296890 None:intergenic
CATGTGTCCTCGCCCAAGTA+GGG 0.540027 3_2:-75299975 None:intergenic
GTCTAAGGACGAGCTCTCAA+CGG 0.540245 3_2:+75303759 Msa0424940:three_prime_UTR
CTCCATGAGAGAAGGAAGGA+AGG 0.541210 3_2:-75295624 None:intergenic
ATTTGGGGCTGCCTCAAGAA+TGG 0.541394 3_2:+75299929 Msa0424940:CDS
GCATAAGCTCTGGAATTGCC+TGG 0.541731 3_2:-75301588 None:intergenic
CTCGTCCTTAGACTATGAAA+AGG 0.542308 3_2:-75303749 None:intergenic
ATGGTATGGAGCACTGGGAT+GGG 0.545273 3_2:+75299948 Msa0424940:CDS
GCATGTGTCCTCGCCCAAGT+AGG 0.545911 3_2:-75299976 None:intergenic
AGGATGCAATGCTGAAGGCA+CGG 0.547103 3_2:+75302731 Msa0424940:CDS
CCACAAGGCTCAAATGTTGA+AGG 0.547147 3_2:-75302513 None:intergenic
AAACAAGCTTGAGCTTTGGT+TGG 0.547324 3_2:+75303694 Msa0424940:three_prime_UTR
TGTAACTATGTATGAAGCAA+TGG 0.549322 3_2:+75303658 Msa0424940:three_prime_UTR
CAAAGCAAAATACATTGATA+GGG 0.553823 3_2:-75297042 None:intergenic
TCAAATGAGGCAGAGAAAGA+AGG 0.556512 3_2:-75303486 None:intergenic
GCATCAAAGTATCGTCCACA+TGG 0.557906 3_2:+75297888 Msa0424940:CDS
CAAGCAGCTGGTCTCAAATG+AGG 0.564126 3_2:-75303499 None:intergenic
GCTGCACCGTATTCTAAGAC+TGG 0.565136 3_2:+75296884 Msa0424940:CDS
AAATATCATGGATGTTAGCA+AGG 0.566439 3_2:+75303930 Msa0424940:three_prime_UTR
ATCCTTATGGAGACAAGCAC+GGG 0.566822 3_2:+75297304 Msa0424940:CDS
TGGGAATGCAGAAGATGAGA+AGG 0.567156 3_2:+75296817 Msa0424940:CDS
ATGTAAAATTGCCTTGCAGA+AGG 0.568730 3_2:+75301407 Msa0424940:CDS
AGTTGGAGCTGAAGAAGTGC+GGG 0.569588 3_2:-75295681 None:intergenic
TCAAGAGACTCCATGAGAGA+AGG 0.573347 3_2:-75295632 None:intergenic
TTCGAAGATGATCAAGATAG+AGG 0.576043 3_2:+75295845 Msa0424940:CDS
GCGCCATTGTTACTGCTGAT+CGG 0.576090 3_2:+75300034 Msa0424940:CDS
TAAGAATCGTGAGGAACTGT+TGG 0.578445 3_2:-75295717 None:intergenic
GTATGACGAGAGATTACACC+TGG 0.578921 3_2:+75303267 Msa0424940:CDS
ACTGGACAATCAGGTCGCAC+TGG 0.579346 3_2:-75301441 None:intergenic
AGGACACATGCTCTTGACAC+AGG 0.582246 3_2:+75299988 Msa0424940:CDS
AATGGTATGGAGCACTGGGA+TGG 0.583206 3_2:+75299947 Msa0424940:CDS
TCCCTGGTCTATGGAATGAA+GGG 0.587551 3_2:-75297281 None:intergenic
TAATGAACACAAGTCTTCAT+GGG 0.588417 3_2:+75303226 Msa0424940:CDS
GAACACAAGTCTTCATGGGA+GGG 0.590428 3_2:+75303230 Msa0424940:CDS
GATTCACAATATTGCACACC+AGG 0.590518 3_2:+75297941 Msa0424940:CDS
TGATGAGAGTATTACATGCA+GGG 0.592163 3_2:+75296738 Msa0424940:CDS
TCTTTGCCAATAGCACTGGC+GGG 0.593606 3_2:+75296929 Msa0424940:CDS
GGGATGGGTATTCCCTACTT+GGG 0.594136 3_2:+75299963 Msa0424940:CDS
GAGGAACTGTTGGTATGAGA+AGG 0.594475 3_2:-75295707 None:intergenic
GGGACAACTGCAGAAACTCA+AGG 0.595408 3_2:+75296758 Msa0424940:CDS
GGATGTGGTGGCACCGTACG+AGG 0.595458 3_2:+75295358 None:intergenic
TAGGTCCGTCTGGTGAAGCA+GGG 0.596649 3_2:-75295817 None:intergenic
CAATATGTTCATCAGATGAT+GGG 0.596741 3_2:-75301262 None:intergenic
GGGCTGCCTCAAGAATGGTA+TGG 0.598454 3_2:+75299934 Msa0424940:CDS
AATCCTTATGGAGACAAGCA+CGG 0.600419 3_2:+75297303 Msa0424940:CDS
TCTATTTCCGGTGACACTGA+CGG 0.601830 3_2:+75295788 Msa0424940:CDS
GGGTATTCCCTACTTGGGCG+AGG 0.603588 3_2:+75299968 Msa0424940:CDS
CCGTAAGTGAACCCTCCCAA+TGG 0.604219 3_2:-75297493 None:intergenic
ATCTGCTTTCAGCAATAGGG+TGG 0.605343 3_2:-75303341 None:intergenic
GCCGAAGGATGCAATGCTGA+AGG 0.605754 3_2:+75302726 Msa0424940:CDS
TACCAGTAGTTCATGAAACA+GGG 0.607738 3_2:+75302571 Msa0424940:CDS
ATGTGATCCGTGCATTCTGT+TGG 0.608368 3_2:+75295503 Msa0424940:five_prime_UTR
CCTTTGTGAAGCAAGTGATA+CGG 0.608920 3_2:-75303798 None:intergenic
TACACAGCCAACAGAATGCA+CGG 0.609926 3_2:-75295510 None:intergenic
AATGATTTGCTCGTATTGAG+CGG 0.611048 3_2:-75303300 None:intergenic
ATACGAGCAAATCATTGAGT+GGG 0.612574 3_2:+75303307 Msa0424940:CDS
GAGATAACAACTACAGAAGG+TGG 0.613804 3_2:+75300512 Msa0424940:CDS
GTCACCGGAAATAGAACGCA+AGG 0.614436 3_2:-75295780 None:intergenic
GCCACCTTCCTGTTATCACT+CGG 0.615007 3_2:-75303464 None:intergenic
AATACGAGCAAATCATTGAG+TGG 0.616706 3_2:+75303306 Msa0424940:CDS
CATCAAAGTATCGTCCACAT+GGG 0.622300 3_2:+75297889 Msa0424940:CDS
CCGTATCACTTGCTTCACAA+AGG 0.623216 3_2:+75303798 Msa0424940:three_prime_UTR
TCTATCTTGATCATCTTCGA+AGG 0.623826 3_2:-75295843 None:intergenic
AGAATACATACAGCCCAACA+AGG 0.626102 3_2:-75303590 None:intergenic
TCGGATAGTAACAGTAAGCA+AGG 0.627715 3_2:+75300053 Msa0424940:CDS
GAGACTCCATGAGAGAAGGA+AGG 0.632453 3_2:-75295628 None:intergenic
AACATGCTCTCCTTTGTCAG+TGG 0.633844 3_2:-75302956 None:intergenic
TATCCGATCAGCAGTAACAA+TGG 0.634823 3_2:-75300037 None:intergenic
GGACAACTGCAGAAACTCAA+GGG 0.634989 3_2:+75296759 Msa0424940:CDS
GAGTTGGAGCTGAAGAAGTG+CGG 0.635111 3_2:-75295682 None:intergenic
TGGGAGATAACAACTACAGA+AGG 0.635680 3_2:+75300509 Msa0424940:CDS
ATCTCTCCTAGATACGTACA+TGG 0.636965 3_2:+75296974 Msa0424940:CDS
AGGTCCGTCTGGTGAAGCAG+GGG 0.637766 3_2:-75295816 None:intergenic
GCTGGAGGAAGCGATGCCGA+AGG 0.640969 3_2:+75302711 Msa0424940:CDS
TATCTAGCCTTGATAATCGG+AGG 0.641442 3_2:-75303405 None:intergenic
GTATAGAGAAGGTGTTGACT+GGG 0.646125 3_2:+75297096 Msa0424940:CDS
AGTGCTCCATACCATTCTTG+AGG 0.647241 3_2:-75299940 None:intergenic
TACAACTGGTTTAGTCCACA+AGG 0.649431 3_2:-75302528 None:intergenic
TGTGTATAGTAGTGTGTGTG+TGG 0.649684 3_2:-75295547 None:intergenic
TGAACACAAGTCTTCATGGG+AGG 0.650187 3_2:+75303229 Msa0424940:CDS
ATCATGAGGAGTCAAGCGAA+AGG 0.653378 3_2:-75295912 None:intergenic
TCCCAATGGAAGCACTAATG+GGG 0.663095 3_2:-75297479 None:intergenic
AAGAACCACAAACATCTGCA+AGG 0.663774 3_2:-75296910 None:intergenic
GGAAGGAAGACCAATGCAGG+AGG 0.665430 3_2:-75295607 None:intergenic
GAATACATACAGCCCAACAA+GGG 0.665570 3_2:-75303589 None:intergenic
GCACCGTATTCTAAGACTGG+TGG 0.666033 3_2:+75296887 Msa0424940:CDS
AAGACCTAACTCCTTCTGCA+AGG 0.666845 3_2:-75301418 None:intergenic
GATTTGCTCGTATTGAGCGG+CGG 0.669443 3_2:-75303297 None:intergenic
TATCATGGATGTTAGCAAGG+AGG 0.670236 3_2:+75303933 Msa0424940:three_prime_UTR
GGGCTGTATGTATTCTACGA+TGG 0.673860 3_2:+75303597 Msa0424940:three_prime_UTR
ACCCTTCATTCCATAGACCA+GGG 0.674753 3_2:+75297280 Msa0424940:CDS
AATCAGCCAAGTAGTCCCTG+TGG 0.675529 3_2:+75303627 Msa0424940:three_prime_UTR
ACTAGAAAACTTACTATCAG+CGG 0.677717 3_2:-75297002 None:intergenic
ATCAAAGTATCGTCCACATG+GGG 0.678467 3_2:+75297890 Msa0424940:CDS
ACCGAGTGATAACAGGAAGG+TGG 0.679952 3_2:+75303463 Msa0424940:three_prime_UTR
AAAGGCATACCAGAATCATG+AGG 0.679979 3_2:-75295926 None:intergenic
ACCAGTAGTTCATGAAACAG+GGG 0.682127 3_2:+75302572 Msa0424940:CDS
TTAGAAGGGAAAGCCAATTG+CGG 0.684978 3_2:-75295740 None:intergenic
GTATGATGGAGAAAGAGACG+AGG 0.689249 3_2:-75295659 None:intergenic
TATGATGGAGAAAGAGACGA+GGG 0.695047 3_2:-75295658 None:intergenic
GCATCCTTATATACCCCATG+TGG 0.695337 3_2:-75297903 None:intergenic
GATGCAATGCTGAAGGCACG+GGG 0.696578 3_2:+75302733 Msa0424940:CDS
TATCTCATAGAATAACTGCA+GGG 0.703392 3_2:+75302325 Msa0424940:CDS
CCAGTAGTTCATGAAACAGG+GGG 0.705069 3_2:+75302573 Msa0424940:CDS
ACCGGAAATAGAACGCAAGG+TGG 0.720708 3_2:-75295777 None:intergenic
AGTGCGACCTGATTGTCCAG+TGG 0.724308 3_2:+75301443 Msa0424940:CDS
TGGCATGCCAATCATTAACG+AGG 0.731653 3_2:-75297531 None:intergenic
GTGACCGAGTGATAACAGGA+AGG 0.732980 3_2:+75303460 Msa0424940:three_prime_UTR
TAAGGACGAGCTCTCAACGG+CGG 0.733893 3_2:+75303762 Msa0424940:three_prime_UTR
TAGGAGAGATAACCATAACA+CGG 0.743995 3_2:-75296961 None:intergenic
CAATTGCGGTAAGAATCGTG+AGG 0.746620 3_2:-75295726 None:intergenic
TATGACGAGAGATTACACCT+GGG 0.773744 3_2:+75303268 Msa0424940:CDS
GATAGAAAGAGTATTCTGAG+CGG 0.785538 3_2:+75300560 Msa0424940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTTATTTTTAT+TGG - chr3_2:75295387-75295406 None:intergenic 0.0%
!!! ATTTTAATTTTAATTTTATA+GGG - chr3_2:75302411-75302430 None:intergenic 0.0%
!!! TATTTTAATTTTAATTTTAT+AGG - chr3_2:75302412-75302431 None:intergenic 0.0%
!! TTATTATTATTCATATATCA+AGG - chr3_2:75297397-75297416 None:intergenic 10.0%
!! AAACTAAATAAATAAACATA+TGG - chr3_2:75297976-75297995 None:intergenic 10.0%
!!! GTTTATTTATTTAGTTTTTT+TGG + chr3_2:75297979-75297998 Msa0424940:intron 10.0%
!! ATTATTGTTCATATAAAATT+GGG - chr3_2:75301951-75301970 None:intergenic 10.0%
!! TATTATTGTTCATATAAAAT+TGG - chr3_2:75301952-75301971 None:intergenic 10.0%
!!! CATAATTTTTGTTTCTAAAA+TGG - chr3_2:75296684-75296703 None:intergenic 15.0%
!! AAAAAAAAAAGATTAAAGCT+AGG - chr3_2:75297579-75297598 None:intergenic 15.0%
!!! AAAAAAAGTATTTGGAAATA+AGG - chr3_2:75297757-75297776 None:intergenic 15.0%
!!! GCTTAATAAAAAAAAGTATT+TGG - chr3_2:75297765-75297784 None:intergenic 15.0%
!!! TATTTATTTAGTTTTTTTGG+CGG + chr3_2:75297982-75298001 Msa0424940:intron 15.0%
!! ATAATCTAATTTATAGAATG+TGG - chr3_2:75298172-75298191 None:intergenic 15.0%
!! CATTCTATAAATTAGATTAT+AGG + chr3_2:75298172-75298191 Msa0424940:intron 15.0%
!! TATTTGTAGTATAATAAGTT+AGG + chr3_2:75298917-75298936 Msa0424940:intron 15.0%
!! TGTGTTATCTATTTAAATAT+TGG + chr3_2:75300111-75300130 Msa0424940:intron 15.0%
!! GTGTTATCTATTTAAATATT+GGG + chr3_2:75300112-75300131 Msa0424940:intron 15.0%
!!! ATTTTCTTATTTTCTTTTTC+TGG - chr3_2:75300897-75300916 None:intergenic 15.0%
!!! AATAATCTGTTTTTTATTAG+TGG - chr3_2:75301115-75301134 None:intergenic 15.0%
!! TGTTTAAATATTTATTTAGC+AGG - chr3_2:75301992-75302011 None:intergenic 15.0%
!! GAAATGAAATTATTAATACA+AGG - chr3_2:75302107-75302126 None:intergenic 15.0%
!! TTGTTATAAATTTCATTAAC+AGG + chr3_2:75302921-75302940 Msa0424940:intron 15.0%
!!! ACATTTTACAATTTTTTGAT+AGG - chr3_2:75303725-75303744 None:intergenic 15.0%
!! ATAAAAAATATTCATGTCGA+TGG + chr3_2:75295407-75295426 Msa0424940:five_prime_UTR 20.0%
!!! ATCTAGAGTTTTATTAGTAT+TGG + chr3_2:75295437-75295456 Msa0424940:five_prime_UTR 20.0%
!!! TAGTATGTTACTTGTTATAA+TGG + chr3_2:75296072-75296091 Msa0424940:intron 20.0%
!!! ATCTTATTGTTTTATTCAAC+AGG + chr3_2:75296159-75296178 Msa0424940:intron 20.0%
!!! TCTTATTGTTTTATTCAACA+GGG + chr3_2:75296160-75296179 Msa0424940:intron 20.0%
!! AATAATATGATCTTAGGATT+GGG - chr3_2:75296549-75296568 None:intergenic 20.0%
!! TGTAACAATAATATGATCTT+AGG - chr3_2:75296555-75296574 None:intergenic 20.0%
!! TAAGATCATATTATTGTTAC+AGG + chr3_2:75296554-75296573 Msa0424940:intron 20.0%
!! AAAAAGAAAAAAGACAGAAA+AGG - chr3_2:75297131-75297150 None:intergenic 20.0%
!! TATTATTCATATATCAAGGA+TGG - chr3_2:75297393-75297412 None:intergenic 20.0%
!!! TAATAAATTTTCTTCTCCTT+TGG + chr3_2:75297411-75297430 Msa0424940:intron 20.0%
!!! TAATCTTTTTTTTTTCCCAT+TGG + chr3_2:75297584-75297603 Msa0424940:intron 20.0%
!! GTTTCTCTTTATTAAAATGT+TGG + chr3_2:75297644-75297663 Msa0424940:intron 20.0%
!!! CAATGAGATCATATTTTATA+TGG - chr3_2:75298683-75298702 None:intergenic 20.0%
!! CATATAAAATATGATCTCAT+TGG + chr3_2:75298681-75298700 Msa0424940:intron 20.0%
!! TTATATAGAAAAATGATGAC+CGG + chr3_2:75299443-75299462 Msa0424940:intron 20.0%
!!! TTATTTTCTCAACTGAAAAA+TGG - chr3_2:75299583-75299602 None:intergenic 20.0%
!!! ATTTTTCAGTTGAGAAAATA+AGG + chr3_2:75299582-75299601 Msa0424940:intron 20.0%
!! ATTTAAATAGATAACACAAC+AGG - chr3_2:75300109-75300128 None:intergenic 20.0%
!! GTGCAATGAAATATTTATTA+TGG + chr3_2:75300629-75300648 Msa0424940:intron 20.0%
!!! AATATAATCTAAAACTTCAC+TGG - chr3_2:75300719-75300738 None:intergenic 20.0%
!!! GTGAAGTTTTAGATTATATT+TGG + chr3_2:75300719-75300738 Msa0424940:intron 20.0%
!!! AGTTTTAGATTATATTTGGT+TGG + chr3_2:75300723-75300742 Msa0424940:intron 20.0%
!! TTTGTGGTAAATATTGATAT+TGG + chr3_2:75300750-75300769 Msa0424940:intron 20.0%
!! AAAGAAAAATTGATAAGAAC+TGG - chr3_2:75300874-75300893 None:intergenic 20.0%
!! AAAAACAGATTATTAGTTGA+TGG + chr3_2:75301121-75301140 Msa0424940:intron 20.0%
!! AAGATAATATAGGGTTTAAT+AGG + chr3_2:75301734-75301753 Msa0424940:intron 20.0%
!! AAAACAAGCAAAATATTAAC+CGG - chr3_2:75301799-75301818 None:intergenic 20.0%
!! ATCAAAAATGATCATTTAAC+TGG - chr3_2:75302070-75302089 None:intergenic 20.0%
!! ATAGTCCTATAAATTATAGA+GGG - chr3_2:75302143-75302162 None:intergenic 20.0%
!! TATAGTCCTATAAATTATAG+AGG - chr3_2:75302144-75302163 None:intergenic 20.0%
!! GAAAAATGGAAAATAATTAG+AGG - chr3_2:75302200-75302219 None:intergenic 20.0%
!!! CTAATTATTTTCCATTTTTC+AGG + chr3_2:75302200-75302219 Msa0424940:intron 20.0%
!! CTTTATAAAGATAAATTTCG+TGG + chr3_2:75302279-75302298 Msa0424940:CDS 20.0%
!! TACATAAGATACATATATTG+TGG - chr3_2:75302356-75302375 None:intergenic 20.0%
!! TTATAAATTTCATTAACAGG+TGG + chr3_2:75302924-75302943 Msa0424940:intron 20.0%
!!! TTTTATATATAAGCATCCTT+TGG + chr3_2:75303033-75303052 Msa0424940:intron 20.0%
!!! AACTTTTATCAAATTTTGAC+AGG + chr3_2:75303178-75303197 Msa0424940:intron 20.0%
!! TGGAGAAAATAAAAATATCA+TGG + chr3_2:75303918-75303937 Msa0424940:three_prime_UTR 20.0%
! TTAGATATGGAAAGAGAAAA+AGG - chr3_2:75295463-75295482 None:intergenic 25.0%
! AAGAGAGGAAATAAAAAGAA+AGG - chr3_2:75295947-75295966 None:intergenic 25.0%
! GCAAAAGAATTTCAATAACA+TGG - chr3_2:75296009-75296028 None:intergenic 25.0%
!! GTTATTGAAATTCTTTTGCT+AGG + chr3_2:75296010-75296029 Msa0424940:intron 25.0%
!!! TCATCATCTAAAATTTGTTG+TGG - chr3_2:75296134-75296153 None:intergenic 25.0%
!!! TTTTAAGTGTATGTTTCCAT+GGG + chr3_2:75296225-75296244 Msa0424940:intron 25.0%
! CAATAATATGATCTTAGGAT+TGG - chr3_2:75296550-75296569 None:intergenic 25.0%
! ATGTAACAAAAACAATGTTG+CGG - chr3_2:75296859-75296878 None:intergenic 25.0%
! CAAAGCAAAATACATTGATA+GGG - chr3_2:75297045-75297064 None:intergenic 25.0%
!!! AATATTACTTCTAGCTTTGA+TGG + chr3_2:75297349-75297368 Msa0424940:intron 25.0%
!!! CTTGCAATTTGCTATTTATT+TGG + chr3_2:75297718-75297737 Msa0424940:intron 25.0%
! GTATTTGGAAATAAGGAAAA+GGG - chr3_2:75297750-75297769 None:intergenic 25.0%
! AGTATTTGGAAATAAGGAAA+AGG - chr3_2:75297751-75297770 None:intergenic 25.0%
! ATATAAAATGCAGCCATTAA+CGG - chr3_2:75298235-75298254 None:intergenic 25.0%
! AAAAATCACTCTCTCAAATA+AGG - chr3_2:75298375-75298394 None:intergenic 25.0%
!! AATTCTTCAAATTCTTTTCG+TGG - chr3_2:75298458-75298477 None:intergenic 25.0%
! TTCAAAGTAAATCCAAACTA+GGG - chr3_2:75298652-75298671 None:intergenic 25.0%
! TAATCCATTTCAATGTGAAA+AGG - chr3_2:75298708-75298727 None:intergenic 25.0%
! TTATTTAAACACGATTCACT+TGG + chr3_2:75298725-75298744 Msa0424940:intron 25.0%
! AGTAAACTCATCTATCATTA+AGG + chr3_2:75299013-75299032 Msa0424940:intron 25.0%
!! CAGTTCGTTACTTAAATTTT+CGG - chr3_2:75299062-75299081 None:intergenic 25.0%
!! TCTGCTGATAAATAGTTTTT+GGG - chr3_2:75299247-75299266 None:intergenic 25.0%
! TATATAGAAAAATGATGACC+GGG + chr3_2:75299444-75299463 Msa0424940:intron 25.0%
!!! AATTTTATGCCTTTTGACTT+GGG - chr3_2:75299509-75299528 None:intergenic 25.0%
!!! TAATTTTATGCCTTTTGACT+TGG - chr3_2:75299510-75299529 None:intergenic 25.0%
!!! GGCTATTTTTATGGAATATA+TGG - chr3_2:75299549-75299568 None:intergenic 25.0%
!!! TTATCATGTGGCTATTTTTA+TGG - chr3_2:75299558-75299577 None:intergenic 25.0%
!!! TGAAAAATGGTTTTATCATG+TGG - chr3_2:75299570-75299589 None:intergenic 25.0%
!!! TATTTTGGGAATGATAAACA+TGG + chr3_2:75299651-75299670 Msa0424940:intron 25.0%
! AATTGATGTGTAATTGTGTT+AGG + chr3_2:75299879-75299898 Msa0424940:intron 25.0%
! ATTGATGTGTAATTGTGTTA+GGG + chr3_2:75299880-75299899 Msa0424940:intron 25.0%
! AAATTGCAATATGTAATTGC+AGG - chr3_2:75299913-75299932 None:intergenic 25.0%
! TGCAATTACATATTGCAATT+TGG + chr3_2:75299912-75299931 Msa0424940:CDS 25.0%
! GCAATTACATATTGCAATTT+GGG + chr3_2:75299913-75299932 Msa0424940:CDS 25.0%
! CAATTACATATTGCAATTTG+GGG + chr3_2:75299914-75299933 Msa0424940:CDS 25.0%
! TAAATTGAGTATCTACTATG+AGG - chr3_2:75300169-75300188 None:intergenic 25.0%
! TGTATGAACGAGAAAAATTA+AGG - chr3_2:75300598-75300617 None:intergenic 25.0%
!! TCATTTTCACCAATAATAGT+AGG + chr3_2:75300795-75300814 Msa0424940:intron 25.0%
! CAAAGTTAACCTACTATTAT+TGG - chr3_2:75300807-75300826 None:intergenic 25.0%
!!! AGTAGGTTAACTTTGAAATT+AGG + chr3_2:75300812-75300831 Msa0424940:intron 25.0%
! GGATATTGTTAACTCTTTAT+TGG + chr3_2:75301157-75301176 Msa0424940:intron 25.0%
!! TTTCATAAATACGTTTGTTG+TGG + chr3_2:75301649-75301668 Msa0424940:intron 25.0%
!! CACATTTTACCAATTTTACA+TGG - chr3_2:75301767-75301786 None:intergenic 25.0%
! AAACAAGCAAAATATTAACC+GGG - chr3_2:75301798-75301817 None:intergenic 25.0%
!! GTTCATAATCTTGTGTTTTA+AGG + chr3_2:75301880-75301899 Msa0424940:intron 25.0%
! AGGACTATATGTTGTATTAT+TGG + chr3_2:75302155-75302174 Msa0424940:intron 25.0%
! ATAAAGATAAATTTCGTGGT+TGG + chr3_2:75302283-75302302 Msa0424940:CDS 25.0%
! TAAAGATAAATTTCGTGGTT+GGG + chr3_2:75302284-75302303 Msa0424940:CDS 25.0%
! ATCTTATGTAGAATAATTGC+AGG + chr3_2:75302366-75302385 Msa0424940:intron 25.0%
! TCTTATGTAGAATAATTGCA+GGG + chr3_2:75302367-75302386 Msa0424940:intron 25.0%
!!! GTTTGATTTTGTTGTTTTAC+AGG + chr3_2:75302662-75302681 Msa0424940:intron 25.0%
!!! CAAAATTTTAATCCATTTGC+TGG + chr3_2:75302693-75302712 Msa0424940:CDS 25.0%
! TTTGAATGAACAAGAAATGA+CGG - chr3_2:75303005-75303024 None:intergenic 25.0%
! GTGTTCATTATATGTTTGAA+TGG - chr3_2:75303216-75303235 None:intergenic 25.0%
!!! TTTTTTACTACCATTTGTTG+AGG + chr3_2:75303546-75303565 Msa0424940:three_prime_UTR 25.0%
!!! TTTTTACTACCATTTGTTGA+GGG + chr3_2:75303547-75303566 Msa0424940:three_prime_UTR 25.0%
! ATATTATATCTTACCCTTGT+TGG + chr3_2:75303576-75303595 Msa0424940:three_prime_UTR 25.0%
! TATTATATCTTACCCTTGTT+GGG + chr3_2:75303577-75303596 Msa0424940:three_prime_UTR 25.0%
! AGTTACAAAAAATTTCCACA+GGG - chr3_2:75303645-75303664 None:intergenic 25.0%
! TAGTTACAAAAAATTTCCAC+AGG - chr3_2:75303646-75303665 None:intergenic 25.0%
! AGATGGAAATAATGAAAAGA+TGG + chr3_2:75303885-75303904 Msa0424940:three_prime_UTR 25.0%
CTCTTTCCATATCTAATTCA+TGG + chr3_2:75295467-75295486 Msa0424940:five_prime_UTR 30.0%
GATCAACCATGAATTAGATA+TGG - chr3_2:75295476-75295495 None:intergenic 30.0%
ACAGTAAGAATATAGAAGAG+AGG - chr3_2:75295962-75295981 None:intergenic 30.0%
!! ATCTAAAATTTGTTGTGGCA+GGG - chr3_2:75296129-75296148 None:intergenic 30.0%
!! GTTTTAAGTGTATGTTTCCA+TGG + chr3_2:75296224-75296243 Msa0424940:intron 30.0%
! GAAGCATCAACAAAAAATCA+TGG - chr3_2:75296285-75296304 None:intergenic 30.0%
!! CACAATTTTGGTAAAAGCTA+TGG - chr3_2:75296311-75296330 None:intergenic 30.0%
! CATAGCTTTTACCAAAATTG+TGG + chr3_2:75296309-75296328 Msa0424940:intron 30.0%
TTATTGTTACAGGAGTGATA+AGG + chr3_2:75296564-75296583 Msa0424940:intron 30.0%
TGTAACAAAAACAATGTTGC+GGG - chr3_2:75296858-75296877 None:intergenic 30.0%
ACTAGAAAACTTACTATCAG+CGG - chr3_2:75297005-75297024 None:intergenic 30.0%
CCAAAGCAAAATACATTGAT+AGG - chr3_2:75297046-75297065 None:intergenic 30.0%
! CCTATCAATGTATTTTGCTT+TGG + chr3_2:75297043-75297062 Msa0424940:CDS 30.0%
! ATCAATGTATTTTGCTTTGG+AGG + chr3_2:75297046-75297065 Msa0424940:CDS 30.0%
! TTTTTCCATGAGTATAGAGA+AGG + chr3_2:75297085-75297104 Msa0424940:CDS 30.0%
!! TGTACTGAATCACTGTTTTT+AGG + chr3_2:75297245-75297264 Msa0424940:intron 30.0%
!!! TCACTGTTTTTAGGTATTTG+TGG + chr3_2:75297254-75297273 Msa0424940:intron 30.0%
AAAAATTGTATCTCGCCAAT+GGG - chr3_2:75297602-75297621 None:intergenic 30.0%
AAAAAATTGTATCTCGCCAA+TGG - chr3_2:75297603-75297622 None:intergenic 30.0%
ACTTTGACAGAAATCTTTCT+TGG - chr3_2:75297626-75297645 None:intergenic 30.0%
!!! TTTTTTATTAAGCTTCCTCG+TGG + chr3_2:75297772-75297791 Msa0424940:intron 30.0%
! AACATATGGATTAACTTACC+TGG - chr3_2:75297962-75297981 None:intergenic 30.0%
GAACTTCAAATACAGAACAA+GGG + chr3_2:75298069-75298088 Msa0424940:intron 30.0%
TCTAATTTATAGAATGTGGC+TGG - chr3_2:75298168-75298187 None:intergenic 30.0%
TATAAAATGCAGCCATTAAC+GGG - chr3_2:75298234-75298253 None:intergenic 30.0%
ATGCAAACAACAAATAACCA+AGG + chr3_2:75298274-75298293 Msa0424940:intron 30.0%
TCAAAAAATGTATTGAGGGA+GGG - chr3_2:75298499-75298518 None:intergenic 30.0%
GGACTCAAAAAATGTATTGA+GGG - chr3_2:75298503-75298522 None:intergenic 30.0%
CTTCAAAGTAAATCCAAACT+AGG - chr3_2:75298653-75298672 None:intergenic 30.0%
ATATATGCTACTGAACAGTA+TGG + chr3_2:75298779-75298798 Msa0424940:intron 30.0%
TATATGCTACTGAACAGTAT+GGG + chr3_2:75298780-75298799 Msa0424940:intron 30.0%
AACATTATTCATCCTCTTTG+TGG - chr3_2:75298833-75298852 None:intergenic 30.0%
CTTGAATTTGTAATGAACAC+AGG + chr3_2:75299214-75299233 Msa0424940:intron 30.0%
! CTCTGCTGATAAATAGTTTT+TGG - chr3_2:75299248-75299267 None:intergenic 30.0%
! GCAGAGAACGAAAAATATTT+TGG + chr3_2:75299262-75299281 Msa0424940:intron 30.0%
GAATATATGGCAGTCTATAT+TGG - chr3_2:75299536-75299555 None:intergenic 30.0%
AAAGTAAGAAAACCAAGTCA+AGG + chr3_2:75299622-75299641 Msa0424940:intron 30.0%
AAAATAAGCTAACCTTGACT+TGG - chr3_2:75299637-75299656 None:intergenic 30.0%
!!! AAGTCAAGGTTAGCTTATTT+TGG + chr3_2:75299636-75299655 Msa0424940:intron 30.0%
!!! AGTCAAGGTTAGCTTATTTT+GGG + chr3_2:75299637-75299656 Msa0424940:intron 30.0%
AGTTGTTACAAATGCTTAGA+TGG + chr3_2:75299793-75299812 Msa0424940:intron 30.0%
CCAAACAATTTAAAGATGTG+AGG - chr3_2:75299831-75299850 None:intergenic 30.0%
CCTCACATCTTTAAATTGTT+TGG + chr3_2:75299828-75299847 Msa0424940:intron 30.0%
! GAAGCTGTCAATTTTCTAAA+AGG + chr3_2:75300012-75300031 Msa0424940:CDS 30.0%
! TGATGCAAGCTTTTAACAAT+TGG - chr3_2:75300211-75300230 None:intergenic 30.0%
CATTCAAATATAGCCTAAGT+GGG + chr3_2:75300338-75300357 Msa0424940:intron 30.0%
ATTCAAATATAGCCTAAGTG+GGG + chr3_2:75300339-75300358 Msa0424940:intron 30.0%
!!! TTTTGGAGTCTTTTAAGCAA+GGG + chr3_2:75300362-75300381 Msa0424940:intron 30.0%
AATAACACACTCATACAAAC+TGG - chr3_2:75300444-75300463 None:intergenic 30.0%
TTATTGTGTGGAATGCTTAA+AGG + chr3_2:75300459-75300478 Msa0424940:intron 30.0%
TATTGTGTGGAATGCTTAAA+GGG + chr3_2:75300460-75300479 Msa0424940:intron 30.0%
! AGATGAGCATTTTCACTTAA+GGG - chr3_2:75300696-75300715 None:intergenic 30.0%
AATTAGCAACTAATGAACAG+AGG - chr3_2:75300953-75300972 None:intergenic 30.0%
! GTTAATGCTAATGGATGAAT+TGG + chr3_2:75301059-75301078 Msa0424940:intron 30.0%
!! AACAGATTATTAGTTGATGG+AGG + chr3_2:75301124-75301143 Msa0424940:intron 30.0%
CTTTATGTTCAAACTTGTGA+CGG + chr3_2:75301189-75301208 Msa0424940:intron 30.0%
ATGGAATTGATGTTACTGAA+TGG + chr3_2:75301237-75301256 Msa0424940:CDS 30.0%
TGGAATTGATGTTACTGAAT+GGG + chr3_2:75301238-75301257 Msa0424940:CDS 30.0%
CAATATGTTCATCAGATGAT+GGG - chr3_2:75301265-75301284 None:intergenic 30.0%
AAGTTCAGCTAAAGATACAA+GGG - chr3_2:75301353-75301372 None:intergenic 30.0%
AAAGTTCAGCTAAAGATACA+AGG - chr3_2:75301354-75301373 None:intergenic 30.0%
TTGGGGTACAAGATAATATA+GGG + chr3_2:75301725-75301744 Msa0424940:intron 30.0%
!! GGTTTTGATCCATGTAAAAT+TGG + chr3_2:75301755-75301774 Msa0424940:intron 30.0%
! GTAAAATGTGATTTTGTTCC+CGG + chr3_2:75301777-75301796 Msa0424940:intron 30.0%
AATCTCTACACTTAACAAAG+TGG + chr3_2:75301820-75301839 Msa0424940:intron 30.0%
TTGAGCCCTCTATAATTTAT+AGG + chr3_2:75302135-75302154 Msa0424940:intron 30.0%
GAAATCCTATATATGAAGAC+TGG + chr3_2:75302238-75302257 Msa0424940:CDS 30.0%
TATCTCATAGAATAACTGCA+GGG + chr3_2:75302325-75302344 Msa0424940:CDS 30.0%
CAACAAAATCAAACATGTCA+AGG - chr3_2:75302656-75302675 None:intergenic 30.0%
!! AATTTTAATCCATTTGCTGG+AGG + chr3_2:75302696-75302715 Msa0424940:CDS 30.0%
! TATGTTGTTGTTCAAGAACT+TGG + chr3_2:75302756-75302775 Msa0424940:intron 30.0%
GAGACAATAGAATACTTGAA+CGG - chr3_2:75302791-75302810 None:intergenic 30.0%
TTGAATGAACAAGAAATGAC+GGG - chr3_2:75303004-75303023 None:intergenic 30.0%
TGACACAATGAAAGATAACA+AGG - chr3_2:75303142-75303161 None:intergenic 30.0%
ATAATGAACACAAGTCTTCA+TGG + chr3_2:75303225-75303244 Msa0424940:CDS 30.0%
TAATGAACACAAGTCTTCAT+GGG + chr3_2:75303226-75303245 Msa0424940:CDS 30.0%
!! ACATATCTAGCCTTGATAAT+CGG - chr3_2:75303411-75303430 None:intergenic 30.0%
AGTAAAAATTAACAAGCAGC+TGG - chr3_2:75303514-75303533 None:intergenic 30.0%
TGTAACTATGTATGAAGCAA+TGG + chr3_2:75303658-75303677 Msa0424940:three_prime_UTR 30.0%
! TTCATCCTTTTCATAGTCTA+AGG + chr3_2:75303744-75303763 Msa0424940:three_prime_UTR 30.0%
TTGTTTGCAATTTGCATAGA+TGG + chr3_2:75303868-75303887 Msa0424940:three_prime_UTR 30.0%
AAATATCATGGATGTTAGCA+AGG + chr3_2:75303930-75303949 Msa0424940:three_prime_UTR 30.0%
!! TTTTTATTGGTAGCCTCGTA+CGG - chr3_2:75295374-75295393 None:intergenic 35.0%
!!! CATTTTTGGTGAGCTTAGAA+GGG - chr3_2:75295757-75295776 None:intergenic 35.0%
TGATCATCTTCGAAGGAAAT+AGG - chr3_2:75295839-75295858 None:intergenic 35.0%
TCTATCTTGATCATCTTCGA+AGG - chr3_2:75295846-75295865 None:intergenic 35.0%
TTCGAAGATGATCAAGATAG+AGG + chr3_2:75295845-75295864 Msa0424940:CDS 35.0%
!! TCCAGAGAGATTGATGATTT+TGG + chr3_2:75295878-75295897 Msa0424940:CDS 35.0%
ACCAAAATCATCAATCTCTC+TGG - chr3_2:75295882-75295901 None:intergenic 35.0%
!! CATCTAAAATTTGTTGTGGC+AGG - chr3_2:75296130-75296149 None:intergenic 35.0%
! GTTATGTTAGTGTTTTCTCC+TGG + chr3_2:75296202-75296221 Msa0424940:intron 35.0%
GGAAACATACACTTAAAACC+AGG - chr3_2:75296223-75296242 None:intergenic 35.0%
! AGCTTTTACCAAAATTGTGG+TGG + chr3_2:75296312-75296331 Msa0424940:intron 35.0%
CAGTGAGATTGTCAGAATAA+CGG - chr3_2:75296342-75296361 None:intergenic 35.0%
AAGCTTGGGTATAATGCAAT+TGG + chr3_2:75296439-75296458 Msa0424940:intron 35.0%
AGTGTAATGCGTATTCAAAC+AGG + chr3_2:75296476-75296495 Msa0424940:intron 35.0%
TGATAAGGTGGTTTAATGGA+GGG + chr3_2:75296579-75296598 Msa0424940:intron 35.0%
! GACATAGGATTTGAGACATA+AGG + chr3_2:75296601-75296620 Msa0424940:intron 35.0%
!! ATTTGAGACATAAGGTATCG+TGG + chr3_2:75296609-75296628 Msa0424940:intron 35.0%
!! TTGATGAGAGTATTACATGC+AGG + chr3_2:75296737-75296756 Msa0424940:CDS 35.0%
!! TGATGAGAGTATTACATGCA+GGG + chr3_2:75296738-75296757 Msa0424940:CDS 35.0%
CAGAAACTCAAGGGAATTTA+AGG + chr3_2:75296768-75296787 Msa0424940:CDS 35.0%
ACGTTGAAAAACCAGAGATT+GGG + chr3_2:75296798-75296817 Msa0424940:CDS 35.0%
TAGGAGAGATAACCATAACA+CGG - chr3_2:75296964-75296983 None:intergenic 35.0%
AACCTAAACTGCAAAACCAA+AGG - chr3_2:75297430-75297449 None:intergenic 35.0%
TGCATACACTGAAACTAAAC+TGG - chr3_2:75297554-75297573 None:intergenic 35.0%
TTTGGAAATAAGGAAAAGGG+AGG - chr3_2:75297747-75297766 None:intergenic 35.0%
! AAAGCTTCTTGTGATTTGTC+TGG + chr3_2:75297826-75297845 Msa0424940:intron 35.0%
! AAGCTTCTTGTGATTTGTCT+GGG + chr3_2:75297827-75297846 Msa0424940:intron 35.0%
GCAATACAGTATCAGTAAGA+CGG - chr3_2:75297859-75297878 None:intergenic 35.0%
! GATACTGTATTGCAGACTTT+TGG + chr3_2:75297866-75297885 Msa0424940:intron 35.0%
AAAGCTCATTTGAGAAAGAG+TGG - chr3_2:75298048-75298067 None:intergenic 35.0%
CGAACTTCAAATACAGAACA+AGG + chr3_2:75298068-75298087 Msa0424940:intron 35.0%
CTCAAAAAATGTATTGAGGG+AGG - chr3_2:75298500-75298519 None:intergenic 35.0%
GGGACTCAAAAAATGTATTG+AGG - chr3_2:75298504-75298523 None:intergenic 35.0%
!!! TTTTTTGAGTCCCCCAAATT+AGG + chr3_2:75298511-75298530 Msa0424940:intron 35.0%
!!! TTTTTGAGTCCCCCAAATTA+GGG + chr3_2:75298512-75298531 Msa0424940:intron 35.0%
! TGGTCCTTTTCACATTGAAA+TGG + chr3_2:75298701-75298720 Msa0424940:intron 35.0%
!! TATCCTCAGGTTTTGTGTAA+CGG - chr3_2:75299126-75299145 None:intergenic 35.0%
AATATGATTCATATCGGGGA+AGG - chr3_2:75299177-75299196 None:intergenic 35.0%
TCCCCGATATGAATCATATT+CGG + chr3_2:75299177-75299196 Msa0424940:intron 35.0%
TCCGAATATGATTCATATCG+GGG - chr3_2:75299181-75299200 None:intergenic 35.0%
CTCCGAATATGATTCATATC+GGG - chr3_2:75299182-75299201 None:intergenic 35.0%
CCTCCGAATATGATTCATAT+CGG - chr3_2:75299183-75299202 None:intergenic 35.0%
TTTGTAATGAACACAGGAGA+TGG + chr3_2:75299220-75299239 Msa0424940:intron 35.0%
! CTTCTTTTACTCACAAAACC+CGG - chr3_2:75299465-75299484 None:intergenic 35.0%
AATGCTTAGATGGTATACGT+TGG + chr3_2:75299803-75299822 Msa0424940:intron 35.0%
TGAGTATCTACTATGAGGAA+CGG - chr3_2:75300164-75300183 None:intergenic 35.0%
! GCAAGCTTTTAACAATTGGT+GGG - chr3_2:75300207-75300226 None:intergenic 35.0%
! TGCAAGCTTTTAACAATTGG+TGG - chr3_2:75300208-75300227 None:intergenic 35.0%
!! ATGGAGGATTTTAGAAGAGA+GGG - chr3_2:75300321-75300340 None:intergenic 35.0%
!! AATGGAGGATTTTAGAAGAG+AGG - chr3_2:75300322-75300341 None:intergenic 35.0%
CTTAGGCTATATTTGAATGG+AGG - chr3_2:75300337-75300356 None:intergenic 35.0%
CCACTTAGGCTATATTTGAA+TGG - chr3_2:75300340-75300359 None:intergenic 35.0%
CCATTCAAATATAGCCTAAG+TGG + chr3_2:75300337-75300356 Msa0424940:intron 35.0%
!!! GTTTTGGAGTCTTTTAAGCA+AGG + chr3_2:75300361-75300380 Msa0424940:intron 35.0%
!! TTTGGAGTCTTTTAAGCAAG+GGG + chr3_2:75300363-75300382 Msa0424940:intron 35.0%
! TGTATGAGTGTGTTATTGTG+TGG + chr3_2:75300447-75300466 Msa0424940:intron 35.0%
!! GATAGAAAGAGTATTCTGAG+CGG + chr3_2:75300560-75300579 Msa0424940:CDS 35.0%
! GAGATGAGCATTTTCACTTA+AGG - chr3_2:75300697-75300716 None:intergenic 35.0%
! ATATTTGGTTGGTGTGTTTG+TGG + chr3_2:75300734-75300753 Msa0424940:intron 35.0%
TATGTTGTGTTCATCTGAAG+TGG + chr3_2:75300975-75300994 Msa0424940:intron 35.0%
GCATGTTCTGTTAATGCTAA+TGG + chr3_2:75301050-75301069 Msa0424940:intron 35.0%
AATCTCTACCACTACACTTA+TGG - chr3_2:75301085-75301104 None:intergenic 35.0%
! GTTGATGGAGGATAATTGTT+AGG + chr3_2:75301136-75301155 Msa0424940:intron 35.0%
CGTCACAAGTTTGAACATAA+AGG - chr3_2:75301191-75301210 None:intergenic 35.0%
GCAATATGTTCATCAGATGA+TGG - chr3_2:75301266-75301285 None:intergenic 35.0%
TTTACCCTAACTTTCTGCAA+TGG + chr3_2:75301375-75301394 Msa0424940:intron 35.0%
ATGTAAAATTGCCTTGCAGA+AGG + chr3_2:75301407-75301426 Msa0424940:CDS 35.0%
AACTTGTAGATTGGATTCGT+TGG + chr3_2:75301529-75301548 Msa0424940:intron 35.0%
GAATCAAGTCAATACCTTTC+TGG - chr3_2:75301567-75301586 None:intergenic 35.0%
CTTGGGGTACAAGATAATAT+AGG + chr3_2:75301724-75301743 Msa0424940:intron 35.0%
!!! TCCATTTTTCAGGTAATGCT+TGG + chr3_2:75302210-75302229 Msa0424940:intron 35.0%
ACCAAGCATTACCTGAAAAA+TGG - chr3_2:75302214-75302233 None:intergenic 35.0%
!!! TTTTCAGGTAATGCTTGGTT+CGG + chr3_2:75302215-75302234 Msa0424940:intron 35.0%
CTCATCCAGTCTTCATATAT+AGG - chr3_2:75302246-75302265 None:intergenic 35.0%
GCAGTTATTCTATGAGATAC+TGG - chr3_2:75302324-75302343 None:intergenic 35.0%
GTATCTCATAGAATAACTGC+AGG + chr3_2:75302324-75302343 Msa0424940:CDS 35.0%
CATATCTCATTGCATACAAC+TGG - chr3_2:75302545-75302564 None:intergenic 35.0%
CAGTTGTATGCAATGAGATA+TGG + chr3_2:75302543-75302562 Msa0424940:CDS 35.0%
ATACCAGTAGTTCATGAAAC+AGG + chr3_2:75302570-75302589 Msa0424940:CDS 35.0%
TACCAGTAGTTCATGAAACA+GGG + chr3_2:75302571-75302590 Msa0424940:CDS 35.0%
AGCGGAAGAAACTTATTCAA+TGG + chr3_2:75302851-75302870 Msa0424940:intron 35.0%
AAATATGAAGACGCTACCAA+AGG - chr3_2:75303052-75303071 None:intergenic 35.0%
ATTGTGTCATCTTCTATTCG+TGG + chr3_2:75303153-75303172 Msa0424940:intron 35.0%
!! TCAAATTTTGACAGGCTCTA+AGG + chr3_2:75303186-75303205 Msa0424940:intron 35.0%
!! AATGATTTGCTCGTATTGAG+CGG - chr3_2:75303303-75303322 None:intergenic 35.0%
AATACGAGCAAATCATTGAG+TGG + chr3_2:75303306-75303325 Msa0424940:CDS 35.0%
ATACGAGCAAATCATTGAGT+GGG + chr3_2:75303307-75303326 Msa0424940:CDS 35.0%
CATATCTGCTTTCAGCAATA+GGG - chr3_2:75303347-75303366 None:intergenic 35.0%
TCATATCTGCTTTCAGCAAT+AGG - chr3_2:75303348-75303367 None:intergenic 35.0%
! AGTTTTTCCTCCGATTATCA+AGG + chr3_2:75303398-75303417 Msa0424940:three_prime_UTR 35.0%
TGTGTATAGTAGTGTGTGTG+TGG - chr3_2:75295550-75295569 None:intergenic 40.0%
! TATGATGGAGAAAGAGACGA+GGG - chr3_2:75295661-75295680 None:intergenic 40.0%
TAAGAATCGTGAGGAACTGT+TGG - chr3_2:75295720-75295739 None:intergenic 40.0%
TTAGAAGGGAAAGCCAATTG+CGG - chr3_2:75295743-75295762 None:intergenic 40.0%
!!! GCATTTTTGGTGAGCTTAGA+AGG - chr3_2:75295758-75295777 None:intergenic 40.0%
! AAAGGCATACCAGAATCATG+AGG - chr3_2:75295929-75295948 None:intergenic 40.0%
TTGTTACAGGAGTGATAAGG+TGG + chr3_2:75296567-75296586 Msa0424940:intron 40.0%
GGAGTGATAAGGTGGTTTAA+TGG + chr3_2:75296575-75296594 Msa0424940:intron 40.0%
GTGATAAGGTGGTTTAATGG+AGG + chr3_2:75296578-75296597 Msa0424940:intron 40.0%
GACGTTGAAAAACCAGAGAT+TGG + chr3_2:75296797-75296816 Msa0424940:CDS 40.0%
AAGAACCACAAACATCTGCA+AGG - chr3_2:75296913-75296932 None:intergenic 40.0%
ATCTCTCCTAGATACGTACA+TGG + chr3_2:75296974-75296993 Msa0424940:CDS 40.0%
CAACACCTTCTCTATACTCA+TGG - chr3_2:75297093-75297112 None:intergenic 40.0%
!! AGTATAGAGAAGGTGTTGAC+TGG + chr3_2:75297095-75297114 Msa0424940:CDS 40.0%
!! GTATAGAGAAGGTGTTGACT+GGG + chr3_2:75297096-75297115 Msa0424940:CDS 40.0%
AATCCTTATGGAGACAAGCA+CGG + chr3_2:75297303-75297322 Msa0424940:CDS 40.0%
!!! CTCCTTTGGTTTTGCAGTTT+AGG + chr3_2:75297425-75297444 Msa0424940:intron 40.0%
GCCTATTCCTCGTTAATGAT+TGG + chr3_2:75297524-75297543 Msa0424940:CDS 40.0%
GCCAATCATTAACGAGGAAT+AGG - chr3_2:75297528-75297547 None:intergenic 40.0%
GGAGTCATTGGAAGCAATAT+AGG - chr3_2:75297691-75297710 None:intergenic 40.0%
TAGCAAATTGCAAGACTGCA+GGG - chr3_2:75297712-75297731 None:intergenic 40.0%
ATAGCAAATTGCAAGACTGC+AGG - chr3_2:75297713-75297732 None:intergenic 40.0%
!! CATCAAAGTATCGTCCACAT+GGG + chr3_2:75297889-75297908 Msa0424940:CDS 40.0%
!! ATCAAAGTATCGTCCACATG+GGG + chr3_2:75297890-75297909 Msa0424940:CDS 40.0%
GATTCACAATATTGCACACC+AGG + chr3_2:75297941-75297960 Msa0424940:CDS 40.0%
GCTGGATAATTGTCAATGAG+AGG - chr3_2:75298150-75298169 None:intergenic 40.0%
GTTCTATAGCAGGTGTTTCA+GGG - chr3_2:75298198-75298217 None:intergenic 40.0%
TGTTCTATAGCAGGTGTTTC+AGG - chr3_2:75298199-75298218 None:intergenic 40.0%
TGATGTGCATGTTCTATAGC+AGG - chr3_2:75298208-75298227 None:intergenic 40.0%
!! TTTTGAGTCCCCCAAATTAG+GGG + chr3_2:75298513-75298532 Msa0424940:intron 40.0%
AGCCAAAATCCCCCTAATTT+GGG - chr3_2:75298526-75298545 None:intergenic 40.0%
AAGCCAAAATCCCCCTAATT+TGG - chr3_2:75298527-75298546 None:intergenic 40.0%
AAAGAGAAGGAATGAGTGGA+AGG - chr3_2:75298589-75298608 None:intergenic 40.0%
GGAAAAAGAGAAGGAATGAG+TGG - chr3_2:75298593-75298612 None:intergenic 40.0%
ATCCAAACTAGGGTCTGTTT+GGG - chr3_2:75298642-75298661 None:intergenic 40.0%
AATCCAAACTAGGGTCTGTT+TGG - chr3_2:75298643-75298662 None:intergenic 40.0%
AAGAAATTTGTGACGAGCTC+AGG + chr3_2:75298879-75298898 Msa0424940:intron 40.0%
CTATCAATCGTTCCTGATCA+CGG - chr3_2:75299088-75299107 None:intergenic 40.0%
AAACCGTTACACAAAACCTG+AGG + chr3_2:75299120-75299139 Msa0424940:intron 40.0%
CCGATATGAATCATATTCGG+AGG + chr3_2:75299180-75299199 Msa0424940:intron 40.0%
! ACATGTGAGAGCAGTTTTTG+TGG + chr3_2:75299290-75299309 Msa0424940:intron 40.0%
AGCTACTTAACCACCCATTA+TGG + chr3_2:75299483-75299502 Msa0424940:intron 40.0%
!!! CTTTTGACTTGGGCCATAAT+GGG - chr3_2:75299499-75299518 None:intergenic 40.0%
TGTGTAATTGTGTTAGGGAG+TGG + chr3_2:75299885-75299904 Msa0424940:intron 40.0%
TATCCGATCAGCAGTAACAA+TGG - chr3_2:75300040-75300059 None:intergenic 40.0%
TCGGATAGTAACAGTAAGCA+AGG + chr3_2:75300053-75300072 Msa0424940:CDS 40.0%
! ATATAGCCTAAGTGGGGTTT+TGG + chr3_2:75300345-75300364 Msa0424940:intron 40.0%
! GCAGGGTAACTTTCTTTTTC+AGG + chr3_2:75300405-75300424 Msa0424940:intron 40.0%
TTCTGTAGTTGTTATCTCCC+AGG - chr3_2:75300510-75300529 None:intergenic 40.0%
TGGGAGATAACAACTACAGA+AGG + chr3_2:75300509-75300528 Msa0424940:CDS 40.0%
GAGATAACAACTACAGAAGG+TGG + chr3_2:75300512-75300531 Msa0424940:CDS 40.0%
! ACAACTACAGAAGGTGGATT+TGG + chr3_2:75300518-75300537 Msa0424940:CDS 40.0%
TGAATTGGCCATAAGTGTAG+TGG + chr3_2:75301074-75301093 Msa0424940:intron 40.0%
!!! TGACGGTTTTATTATCGACC+AGG + chr3_2:75301206-75301225 Msa0424940:intron 40.0%
!!! GACGGTTTTATTATCGACCA+GGG + chr3_2:75301207-75301226 Msa0424940:intron 40.0%
TCAATTCCATTTGTGATCCC+TGG - chr3_2:75301227-75301246 None:intergenic 40.0%
CAAAATCAACCTTCCCAGAA+AGG - chr3_2:75301310-75301329 None:intergenic 40.0%
CTGTCCATTGCAGAAAGTTA+GGG - chr3_2:75301382-75301401 None:intergenic 40.0%
AGATAACATGAACTCACCAC+TGG - chr3_2:75301462-75301481 None:intergenic 40.0%
GTGAGTTCATGTTATCTGCT+GGG + chr3_2:75301465-75301484 Msa0424940:intron 40.0%
! ACTCTTTCTTGTATTGACCG+TGG + chr3_2:75301502-75301521 Msa0424940:intron 40.0%
CAATCTACAAGTTTCAGCCA+CGG - chr3_2:75301522-75301541 None:intergenic 40.0%
GGAAGACTTGATTACCAGAA+AGG + chr3_2:75301550-75301569 Msa0424940:CDS 40.0%
GTGGCAAATAATGAAGTCCT+TGG + chr3_2:75301668-75301687 Msa0424940:intron 40.0%
TAATGAAGTCCTTGGATTCC+TGG + chr3_2:75301676-75301695 Msa0424940:intron 40.0%
! AGATAACACGGATTGCAGAT+AGG - chr3_2:75301704-75301723 None:intergenic 40.0%
TGCAATCCGTGTTATCTCTT+GGG + chr3_2:75301707-75301726 Msa0424940:intron 40.0%
TTGTACCCCAAGAGATAACA+CGG - chr3_2:75301716-75301735 None:intergenic 40.0%
AGATTATGAACTGACAGACC+TGG - chr3_2:75301871-75301890 None:intergenic 40.0%
! TTTCAGGTAATGCTTGGTTC+GGG + chr3_2:75302216-75302235 Msa0424940:intron 40.0%
GATAAATTTCGTGGTTGGGT+TGG + chr3_2:75302288-75302307 Msa0424940:CDS 40.0%
! TACAACTGGTTTAGTCCACA+AGG - chr3_2:75302531-75302550 None:intergenic 40.0%
ACCAGTAGTTCATGAAACAG+GGG + chr3_2:75302572-75302591 Msa0424940:CDS 40.0%
AAGTTTCTTCCGCTTGAGTT+GGG - chr3_2:75302845-75302864 None:intergenic 40.0%
TAAGTTTCTTCCGCTTGAGT+TGG - chr3_2:75302846-75302865 None:intergenic 40.0%
! AATCGAGTTGTTTCGCTTAG+CGG - chr3_2:75302887-75302906 None:intergenic 40.0%
TGGGAGGGATTGATAAAAAG+AGG + chr3_2:75303245-75303264 Msa0424940:CDS 40.0%
TATGACGAGAGATTACACCT+GGG + chr3_2:75303268-75303287 Msa0424940:CDS 40.0%
AATCATTGAGTGGGCATTCA+TGG + chr3_2:75303316-75303335 Msa0424940:CDS 40.0%
!! TATCTAGCCTTGATAATCGG+AGG - chr3_2:75303408-75303427 None:intergenic 40.0%
TCAAATGAGGCAGAGAAAGA+AGG - chr3_2:75303489-75303508 None:intergenic 40.0%
TATGTGCAACCCTCAACAAA+TGG - chr3_2:75303559-75303578 None:intergenic 40.0%
GAATACATACAGCCCAACAA+GGG - chr3_2:75303592-75303611 None:intergenic 40.0%
AGAATACATACAGCCCAACA+AGG - chr3_2:75303593-75303612 None:intergenic 40.0%
AAATTTCCACAGGGACTACT+TGG - chr3_2:75303636-75303655 None:intergenic 40.0%
CTGTAAACAAGCTTGAGCTT+TGG + chr3_2:75303690-75303709 Msa0424940:three_prime_UTR 40.0%
! AAACAAGCTTGAGCTTTGGT+TGG + chr3_2:75303694-75303713 Msa0424940:three_prime_UTR 40.0%
CTCGTCCTTAGACTATGAAA+AGG - chr3_2:75303752-75303771 None:intergenic 40.0%
CCTTTGTGAAGCAAGTGATA+CGG - chr3_2:75303801-75303820 None:intergenic 40.0%
TATCATGGATGTTAGCAAGG+AGG + chr3_2:75303933-75303952 Msa0424940:three_prime_UTR 40.0%
ATCATGGATGTTAGCAAGGA+GGG + chr3_2:75303934-75303953 Msa0424940:three_prime_UTR 40.0%
ATGTGATCCGTGCATTCTGT+TGG + chr3_2:75295503-75295522 Msa0424940:five_prime_UTR 45.0%
TACACAGCCAACAGAATGCA+CGG - chr3_2:75295513-75295532 None:intergenic 45.0%
AAGACCAATGCAGGAGGAAA+GGG - chr3_2:75295604-75295623 None:intergenic 45.0%
TTCCTTCCTTCCTTCTCTCA+TGG + chr3_2:75295622-75295641 Msa0424940:exon 45.0%
TCAAGAGACTCCATGAGAGA+AGG - chr3_2:75295635-75295654 None:intergenic 45.0%
! GTATGATGGAGAAAGAGACG+AGG - chr3_2:75295662-75295681 None:intergenic 45.0%
TTGGTATGAGAAGGTCGAGT+TGG - chr3_2:75295701-75295720 None:intergenic 45.0%
GAGGAACTGTTGGTATGAGA+AGG - chr3_2:75295710-75295729 None:intergenic 45.0%
CAATTGCGGTAAGAATCGTG+AGG - chr3_2:75295729-75295748 None:intergenic 45.0%
CTCACGATTCTTACCGCAAT+TGG + chr3_2:75295727-75295746 Msa0424940:CDS 45.0%
! AGAACGCAAGGTGGCATTTT+TGG - chr3_2:75295771-75295790 None:intergenic 45.0%
TCTATTTCCGGTGACACTGA+CGG + chr3_2:75295788-75295807 Msa0424940:CDS 45.0%
ATCATGAGGAGTCAAGCGAA+AGG - chr3_2:75295915-75295934 None:intergenic 45.0%
! TTTGTTGTGGCAGGGCAATT+GGG - chr3_2:75296121-75296140 None:intergenic 45.0%
!! ATTTGTTGTGGCAGGGCAAT+TGG - chr3_2:75296122-75296141 None:intergenic 45.0%
!! CAGTAGCTTTGGCGAAATCA+TGG + chr3_2:75296248-75296267 Msa0424940:intron 45.0%
TGGCGAAATCATGGTATCTG+TGG + chr3_2:75296257-75296276 Msa0424940:intron 45.0%
!!! AGCTCAGCTGGTTTTAGCTA+AGG - chr3_2:75296525-75296544 None:intergenic 45.0%
GTGGTTTAATGGAGGGACAT+AGG + chr3_2:75296586-75296605 Msa0424940:intron 45.0%
GGACAACTGCAGAAACTCAA+GGG + chr3_2:75296759-75296778 Msa0424940:CDS 45.0%
TCTTCTGCATTCCCAATCTC+TGG - chr3_2:75296812-75296831 None:intergenic 45.0%
TGGGAATGCAGAAGATGAGA+AGG + chr3_2:75296817-75296836 Msa0424940:CDS 45.0%
AGGCCACCAGTCTTAGAATA+CGG - chr3_2:75296893-75296912 None:intergenic 45.0%
TGGTTCTTTGCCAATAGCAC+TGG + chr3_2:75296925-75296944 Msa0424940:CDS 45.0%
! TTCTTTGCCAATAGCACTGG+CGG + chr3_2:75296928-75296947 Msa0424940:CDS 45.0%
GCAGTACCATGTACGTATCT+AGG - chr3_2:75296983-75297002 None:intergenic 45.0%
ACCCTTCATTCCATAGACCA+GGG + chr3_2:75297280-75297299 Msa0424940:CDS 45.0%
TCCCTGGTCTATGGAATGAA+GGG - chr3_2:75297284-75297303 None:intergenic 45.0%
TTCCCTGGTCTATGGAATGA+AGG - chr3_2:75297285-75297304 None:intergenic 45.0%
CATAAGGATTCCCTGGTCTA+TGG - chr3_2:75297293-75297312 None:intergenic 45.0%
CATAGACCAGGGAATCCTTA+TGG + chr3_2:75297291-75297310 Msa0424940:CDS 45.0%
TTGTCTCCATAAGGATTCCC+TGG - chr3_2:75297300-75297319 None:intergenic 45.0%
ATCCTTATGGAGACAAGCAC+GGG + chr3_2:75297304-75297323 Msa0424940:CDS 45.0%
CGGGACGTTTAAGGATAATC+AGG + chr3_2:75297323-75297342 Msa0424940:CDS 45.0%
!! TCCCAATGGAAGCACTAATG+GGG - chr3_2:75297482-75297501 None:intergenic 45.0%
!! CTCCCAATGGAAGCACTAAT+GGG - chr3_2:75297483-75297502 None:intergenic 45.0%
CATTAGTGCTTCCATTGGGA+GGG + chr3_2:75297482-75297501 Msa0424940:CDS 45.0%
TGGCATGCCAATCATTAACG+AGG - chr3_2:75297534-75297553 None:intergenic 45.0%
TAAGCTTCCTCGTGGTATGT+AGG + chr3_2:75297780-75297799 Msa0424940:intron 45.0%
GTGAAAACCTACATACCACG+AGG - chr3_2:75297790-75297809 None:intergenic 45.0%
!! GCATCAAAGTATCGTCCACA+TGG + chr3_2:75297888-75297907 Msa0424940:CDS 45.0%
TCGTCCACATGGGGTATATA+AGG + chr3_2:75297899-75297918 Msa0424940:CDS 45.0%
GCATCCTTATATACCCCATG+TGG - chr3_2:75297906-75297925 None:intergenic 45.0%
!!! GTTTTTTTGGCGGTGTTGCT+AGG + chr3_2:75297992-75298011 Msa0424940:intron 45.0%
TGCACATCAACACCCGTTAA+TGG + chr3_2:75298219-75298238 Msa0424940:intron 45.0%
TAACCAAGGACTGTCCTGTT+AGG + chr3_2:75298288-75298307 Msa0424940:intron 45.0%
AATGTATTGAGGGAGGGTCT+TGG - chr3_2:75298493-75298512 None:intergenic 45.0%
TTTGAGTCCCCCAAATTAGG+GGG + chr3_2:75298514-75298533 Msa0424940:intron 45.0%
CCAAAATCCCCCTAATTTGG+GGG - chr3_2:75298524-75298543 None:intergenic 45.0%
GCCAAAATCCCCCTAATTTG+GGG - chr3_2:75298525-75298544 None:intergenic 45.0%
GAATGAGTGGAAGGAACAGA+GGG - chr3_2:75298580-75298599 None:intergenic 45.0%
!! GAGGGCTTTGGAAAAAGAGA+AGG - chr3_2:75298602-75298621 None:intergenic 45.0%
TTTGGGAGTTTAGGAGTGGA+GGG - chr3_2:75298625-75298644 None:intergenic 45.0%
TCTGTTTGGGAGTTTAGGAG+TGG - chr3_2:75298629-75298648 None:intergenic 45.0%
TAGGGTCTGTTTGGGAGTTT+AGG - chr3_2:75298634-75298653 None:intergenic 45.0%
TGATCTGTGATGCCACAAAG+AGG + chr3_2:75298818-75298837 Msa0424940:intron 45.0%
!!! CCTTTTGACTTGGGCCATAA+TGG - chr3_2:75299500-75299519 None:intergenic 45.0%
CCATTATGGCCCAAGTCAAA+AGG + chr3_2:75299497-75299516 Msa0424940:intron 45.0%
AGTGCTCCATACCATTCTTG+AGG - chr3_2:75299943-75299962 None:intergenic 45.0%
TCAAGAATGGTATGGAGCAC+TGG + chr3_2:75299942-75299961 Msa0424940:CDS 45.0%
! CAAGAATGGTATGGAGCACT+GGG + chr3_2:75299943-75299962 Msa0424940:CDS 45.0%
AAGACTCCAAAACCCCACTT+AGG - chr3_2:75300354-75300373 None:intergenic 45.0%
! TCTTTTAAGCAAGGGGTTGC+AGG + chr3_2:75300370-75300389 Msa0424940:intron 45.0%
GGAATAACCCTGGAAAAGGA+AGG - chr3_2:75300489-75300508 None:intergenic 45.0%
! TCCTTTTCCAGGGTTATTCC+TGG + chr3_2:75300489-75300508 Msa0424940:intron 45.0%
! CCTTTTCCAGGGTTATTCCT+GGG + chr3_2:75300490-75300509 Msa0424940:intron 45.0%
TTATCTCCCAGGAATAACCC+TGG - chr3_2:75300499-75300518 None:intergenic 45.0%
! AGAAGGTGGATTTGGTCTAC+AGG + chr3_2:75300526-75300545 Msa0424940:CDS 45.0%
AAGTGGCTGTTTGCAGACTT+TGG + chr3_2:75300992-75301011 Msa0424940:intron 45.0%
TATCGACCAGGGATCACAAA+TGG + chr3_2:75301218-75301237 Msa0424940:intron 45.0%
AAGGTCGTCAGCAGAATAGT+TGG - chr3_2:75301291-75301310 None:intergenic 45.0%
TATTCTGCTGACGACCTTTC+TGG + chr3_2:75301293-75301312 Msa0424940:CDS 45.0%
ATTCTGCTGACGACCTTTCT+GGG + chr3_2:75301294-75301313 Msa0424940:CDS 45.0%
CAGCTAAAGATACAAGGGAG+AGG - chr3_2:75301348-75301367 None:intergenic 45.0%
CCTGTCCATTGCAGAAAGTT+AGG - chr3_2:75301383-75301402 None:intergenic 45.0%
CCTAACTTTCTGCAATGGAC+AGG + chr3_2:75301380-75301399 Msa0424940:intron 45.0%
ATTGCCTTGCAGAAGGAGTT+AGG + chr3_2:75301414-75301433 Msa0424940:CDS 45.0%
AAGACCTAACTCCTTCTGCA+AGG - chr3_2:75301421-75301440 None:intergenic 45.0%
GGTGAGTTCATGTTATCTGC+TGG + chr3_2:75301464-75301483 Msa0424940:intron 45.0%
CGTGGCTGAAACTTGTAGAT+TGG + chr3_2:75301520-75301539 Msa0424940:intron 45.0%
!! AGGTATTGACTTGATTCGCC+AGG + chr3_2:75301570-75301589 Msa0424940:CDS 45.0%
ACATCGTCTTGCATAAGCTC+TGG - chr3_2:75301601-75301620 None:intergenic 45.0%
AGATAGGTACCAGGAATCCA+AGG - chr3_2:75301688-75301707 None:intergenic 45.0%
CTGCAATCCGTGTTATCTCT+TGG + chr3_2:75301706-75301725 Msa0424940:intron 45.0%
GCAATCCGTGTTATCTCTTG+GGG + chr3_2:75301708-75301727 Msa0424940:intron 45.0%
ACCTGGTAAGAGCTTCATGA+GGG - chr3_2:75301854-75301873 None:intergenic 45.0%
CCACAAGGCTCAAATGTTGA+AGG - chr3_2:75302516-75302535 None:intergenic 45.0%
CCTTCAACATTTGAGCCTTG+TGG + chr3_2:75302513-75302532 Msa0424940:CDS 45.0%
CCAGTAGTTCATGAAACAGG+GGG + chr3_2:75302573-75302592 Msa0424940:CDS 45.0%
! AGTTGGGGTGTAAGGTACTA+AGG - chr3_2:75302829-75302848 None:intergenic 45.0%
! AGTTTCTTCCGCTTGAGTTG+GGG - chr3_2:75302844-75302863 None:intergenic 45.0%
TTGTTTCGCTTAGCGGTTAG+CGG - chr3_2:75302880-75302899 None:intergenic 45.0%
! GACGTTTTCTCCACTGACAA+AGG + chr3_2:75302946-75302965 Msa0424940:CDS 45.0%
AACATGCTCTCCTTTGTCAG+TGG - chr3_2:75302959-75302978 None:intergenic 45.0%
! GACAAAGGAGAGCATGTTAG+TGG + chr3_2:75302961-75302980 Msa0424940:CDS 45.0%
TGAACACAAGTCTTCATGGG+AGG + chr3_2:75303229-75303248 Msa0424940:CDS 45.0%
GAACACAAGTCTTCATGGGA+GGG + chr3_2:75303230-75303249 Msa0424940:CDS 45.0%
GTATGACGAGAGATTACACC+TGG + chr3_2:75303267-75303286 Msa0424940:CDS 45.0%
GAGAGATTACACCTGGGAAA+AGG + chr3_2:75303274-75303293 Msa0424940:CDS 45.0%
ATCTGCTTTCAGCAATAGGG+TGG - chr3_2:75303344-75303363 None:intergenic 45.0%
AATCGTGACCGAGTGATAAC+AGG + chr3_2:75303456-75303475 Msa0424940:three_prime_UTR 45.0%
GGGCTGTATGTATTCTACGA+TGG + chr3_2:75303597-75303616 Msa0424940:three_prime_UTR 45.0%
CCGTATCACTTGCTTCACAA+AGG + chr3_2:75303798-75303817 Msa0424940:three_prime_UTR 45.0%
! GAAAAGATGGCTTGCACAGA+TGG + chr3_2:75303898-75303917 Msa0424940:three_prime_UTR 45.0%
!! TTAAAAATATATTAATCATA+AGG - chr3_2:75298418-75298437 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTGAAA+GGG - chr3_2:75302015-75302034 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - chr3_2:75302016-75302035 None:intergenic 5.0%
GAAGACCAATGCAGGAGGAA+AGG - chr3_2:75295605-75295624 None:intergenic 50.0%
GAAGGAAGGAAGACCAATGC+AGG - chr3_2:75295613-75295632 None:intergenic 50.0%
CTCCATGAGAGAAGGAAGGA+AGG - chr3_2:75295627-75295646 None:intergenic 50.0%
GAGACTCCATGAGAGAAGGA+AGG - chr3_2:75295631-75295650 None:intergenic 50.0%
! CTGAAGAAGTGCGGGTATGA+TGG - chr3_2:75295676-75295695 None:intergenic 50.0%
! AGTTGGAGCTGAAGAAGTGC+GGG - chr3_2:75295684-75295703 None:intergenic 50.0%
GAGTTGGAGCTGAAGAAGTG+CGG - chr3_2:75295685-75295704 None:intergenic 50.0%
GCCACCTTGCGTTCTATTTC+CGG + chr3_2:75295776-75295795 Msa0424940:CDS 50.0%
ACCGGAAATAGAACGCAAGG+TGG - chr3_2:75295780-75295799 None:intergenic 50.0%
GTCACCGGAAATAGAACGCA+AGG - chr3_2:75295783-75295802 None:intergenic 50.0%
TCGAAGGAAATAGGTCCGTC+TGG - chr3_2:75295830-75295849 None:intergenic 50.0%
CGCTTGACTCCTCATGATTC+TGG + chr3_2:75295917-75295936 Msa0424940:CDS 50.0%
GTTTCCATGGGCAGTAGCTT+TGG + chr3_2:75296237-75296256 Msa0424940:intron 50.0%
! ACGGTGAGCCACCACAATTT+TGG - chr3_2:75296323-75296342 None:intergenic 50.0%
!! CTTTTGAGTAGTCGCGCGTT+TGG - chr3_2:75296422-75296441 None:intergenic 50.0%
GCGCGACTACTCAAAAGCTT+GGG + chr3_2:75296425-75296444 Msa0424940:intron 50.0%
TTAGGATTGGGTAGCTCAGC+TGG - chr3_2:75296537-75296556 None:intergenic 50.0%
GGGACAACTGCAGAAACTCA+AGG + chr3_2:75296758-75296777 Msa0424940:CDS 50.0%
!! GCTGCACCGTATTCTAAGAC+TGG + chr3_2:75296884-75296903 Msa0424940:CDS 50.0%
!! GCACCGTATTCTAAGACTGG+TGG + chr3_2:75296887-75296906 Msa0424940:CDS 50.0%
!! TCTTTGCCAATAGCACTGGC+GGG + chr3_2:75296929-75296948 Msa0424940:CDS 50.0%
!! TTTGGAGGCGCTCAAGAAGT+TGG + chr3_2:75297061-75297080 Msa0424940:CDS 50.0%
CACCCTTCATTCCATAGACC+AGG + chr3_2:75297279-75297298 Msa0424940:CDS 50.0%
AGACAAGCACGGGACGTTTA+AGG + chr3_2:75297314-75297333 Msa0424940:CDS 50.0%
AGCCCCATTAGTGCTTCCAT+TGG + chr3_2:75297477-75297496 Msa0424940:CDS 50.0%
GCCCCATTAGTGCTTCCATT+GGG + chr3_2:75297478-75297497 Msa0424940:CDS 50.0%
!! CCTCCCAATGGAAGCACTAA+TGG - chr3_2:75297484-75297503 None:intergenic 50.0%
CCATTAGTGCTTCCATTGGG+AGG + chr3_2:75297481-75297500 Msa0424940:CDS 50.0%
CCATTGGGAGGGTTCACTTA+CGG + chr3_2:75297493-75297512 Msa0424940:CDS 50.0%
ATGAGAGGCTGCTAAGCTGA+AGG - chr3_2:75298135-75298154 None:intergenic 50.0%
TGTCCTGTTAGGCTCCGTTT+GGG + chr3_2:75298299-75298318 Msa0424940:intron 50.0%
TTAGGCTCCGTTTGGGAGTT+TGG + chr3_2:75298306-75298325 Msa0424940:intron 50.0%
! CCCCCAAATTAGGGGGATTT+TGG + chr3_2:75298521-75298540 Msa0424940:intron 50.0%
GAACAGAGGGCAATGCTTTG+GGG - chr3_2:75298567-75298586 None:intergenic 50.0%
GGAACAGAGGGCAATGCTTT+GGG - chr3_2:75298568-75298587 None:intergenic 50.0%
AGGAACAGAGGGCAATGCTT+TGG - chr3_2:75298569-75298588 None:intergenic 50.0%
GGAATGAGTGGAAGGAACAG+AGG - chr3_2:75298581-75298600 None:intergenic 50.0%
TTGGGAGTTTAGGAGTGGAG+GGG - chr3_2:75298624-75298643 None:intergenic 50.0%
GTTTGGGAGTTTAGGAGTGG+AGG - chr3_2:75298626-75298645 None:intergenic 50.0%
CTCCCAAACAGACCCTAGTT+TGG + chr3_2:75298637-75298656 Msa0424940:intron 50.0%
TCAATCGTTCCTGATCACGG+TGG - chr3_2:75299085-75299104 None:intergenic 50.0%
AAGGACCTGTTGAATCCTGG+GGG - chr3_2:75299158-75299177 None:intergenic 50.0%
GAAGGACCTGTTGAATCCTG+GGG - chr3_2:75299159-75299178 None:intergenic 50.0%
GGAAGGACCTGTTGAATCCT+GGG - chr3_2:75299160-75299179 None:intergenic 50.0%
!! TTGACTTGGGCCATAATGGG+TGG - chr3_2:75299496-75299515 None:intergenic 50.0%
! ATTTGGGGCTGCCTCAAGAA+TGG + chr3_2:75299929-75299948 Msa0424940:CDS 50.0%
!! AATGGTATGGAGCACTGGGA+TGG + chr3_2:75299947-75299966 Msa0424940:CDS 50.0%
!! ATGGTATGGAGCACTGGGAT+GGG + chr3_2:75299948-75299967 Msa0424940:CDS 50.0%
TGGGATGGGTATTCCCTACT+TGG + chr3_2:75299962-75299981 Msa0424940:CDS 50.0%
GGGATGGGTATTCCCTACTT+GGG + chr3_2:75299963-75299982 Msa0424940:CDS 50.0%
AGGACACATGCTCTTGACAC+AGG + chr3_2:75299988-75300007 Msa0424940:CDS 50.0%
GCGCCATTGTTACTGCTGAT+CGG + chr3_2:75300034-75300053 Msa0424940:CDS 50.0%
AAGTTACCCTGCCGAACCTT+GGG - chr3_2:75300397-75300416 None:intergenic 50.0%
AAAGTTACCCTGCCGAACCT+TGG - chr3_2:75300398-75300417 None:intergenic 50.0%
! AAGGGATGCCTTCCTTTTCC+AGG + chr3_2:75300478-75300497 Msa0424940:intron 50.0%
! AGGGATGCCTTCCTTTTCCA+GGG + chr3_2:75300479-75300498 Msa0424940:intron 50.0%
CCCAGGAATAACCCTGGAAA+AGG - chr3_2:75300493-75300512 None:intergenic 50.0%
GAACTCACCACTGGACAATC+AGG - chr3_2:75301453-75301472 None:intergenic 50.0%
!! GCATAAGCTCTGGAATTGCC+TGG - chr3_2:75301591-75301610 None:intergenic 50.0%
! ACGGATTGCAGATAGGTACC+AGG - chr3_2:75301697-75301716 None:intergenic 50.0%
TCCCTCATGAAGCTCTTACC+AGG + chr3_2:75301850-75301869 Msa0424940:intron 50.0%
GACCTGGTAAGAGCTTCATG+AGG - chr3_2:75301855-75301874 None:intergenic 50.0%
CCCCCTGTTTCATGAACTAC+TGG - chr3_2:75302576-75302595 None:intergenic 50.0%
GCCTTCAGCATTGCATCCTT+CGG - chr3_2:75302730-75302749 None:intergenic 50.0%
AGGATGCAATGCTGAAGGCA+CGG + chr3_2:75302731-75302750 Msa0424940:CDS 50.0%
ACCTTACACCCCAACTCAAG+CGG + chr3_2:75302833-75302852 Msa0424940:intron 50.0%
! GATTTGCTCGTATTGAGCGG+CGG - chr3_2:75303300-75303319 None:intergenic 50.0%
GTGACCGAGTGATAACAGGA+AGG + chr3_2:75303460-75303479 Msa0424940:three_prime_UTR 50.0%
ACCGAGTGATAACAGGAAGG+TGG + chr3_2:75303463-75303482 Msa0424940:three_prime_UTR 50.0%
GCCACCTTCCTGTTATCACT+CGG - chr3_2:75303467-75303486 None:intergenic 50.0%
! CAAGCAGCTGGTCTCAAATG+AGG - chr3_2:75303502-75303521 None:intergenic 50.0%
AATCAGCCAAGTAGTCCCTG+TGG + chr3_2:75303627-75303646 Msa0424940:three_prime_UTR 50.0%
GTCTAAGGACGAGCTCTCAA+CGG + chr3_2:75303759-75303778 Msa0424940:three_prime_UTR 50.0%
GTTAGCAAGGAGGGATTTGC+TGG + chr3_2:75303943-75303962 Msa0424940:three_prime_UTR 50.0%
CGATCCCTTTCCTCCTGCAT+TGG + chr3_2:75295597-75295616 Msa0424940:five_prime_UTR 55.0%
GGAAGGAAGACCAATGCAGG+AGG - chr3_2:75295610-75295629 None:intergenic 55.0%
TAGGTCCGTCTGGTGAAGCA+GGG - chr3_2:75295820-75295839 None:intergenic 55.0%
ATAGGTCCGTCTGGTGAAGC+AGG - chr3_2:75295821-75295840 None:intergenic 55.0%
TTGTGGCAGGGCAATTGGGT+GGG - chr3_2:75296117-75296136 None:intergenic 55.0%
TTCGCCAAAGCTACTGCCCA+TGG - chr3_2:75296244-75296263 None:intergenic 55.0%
CGCGCGACTACTCAAAAGCT+TGG + chr3_2:75296424-75296443 Msa0424940:intron 55.0%
! GGTGGCCTTGCAGATGTTTG+TGG + chr3_2:75296905-75296924 Msa0424940:CDS 55.0%
GTCCCGTGCTTGTCTCCATA+AGG - chr3_2:75297309-75297328 None:intergenic 55.0%
TGGGGCTTCACATGCTGCAT+GGG - chr3_2:75297464-75297483 None:intergenic 55.0%
ATGGGGCTTCACATGCTGCA+TGG - chr3_2:75297465-75297484 None:intergenic 55.0%
CCGTAAGTGAACCCTCCCAA+TGG - chr3_2:75297496-75297515 None:intergenic 55.0%
GCAAGACTGCAGGGAGTCAT+TGG - chr3_2:75297703-75297722 None:intergenic 55.0%
GAGCCTAACAGGACAGTCCT+TGG - chr3_2:75298294-75298313 None:intergenic 55.0%
CTGTCCTGTTAGGCTCCGTT+TGG + chr3_2:75298298-75298317 Msa0424940:intron 55.0%
ACTCCCAAACGGAGCCTAAC+AGG - chr3_2:75298305-75298324 None:intergenic 55.0%
GCTCCGTTTGGGAGTTTGGA+GGG + chr3_2:75298310-75298329 Msa0424940:intron 55.0%
CTCCGTTTGGGAGTTTGGAG+GGG + chr3_2:75298311-75298330 Msa0424940:intron 55.0%
CTCCCCTCCAAACTCCCAAA+CGG - chr3_2:75298316-75298335 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr3_2:75298315-75298334 Msa0424940:intron 55.0%
AGGGGAGGGAGAGTAACAGA+GGG + chr3_2:75298329-75298348 Msa0424940:intron 55.0%
AGGGAGAGTAACAGAGGGAG+AGG + chr3_2:75298334-75298353 Msa0424940:intron 55.0%
GTATTGAGGGAGGGTCTTGG+AGG - chr3_2:75298490-75298509 None:intergenic 55.0%
GAGTTTAGGAGTGGAGGGGA+GGG - chr3_2:75298620-75298639 None:intergenic 55.0%
AACGAACTGCCACCGTGATC+AGG + chr3_2:75299073-75299092 Msa0424940:intron 55.0%
CGAATCCCCCAGGATTCAAC+AGG + chr3_2:75299150-75299169 Msa0424940:intron 55.0%
GGGAAGGACCTGTTGAATCC+TGG - chr3_2:75299161-75299180 None:intergenic 55.0%
GGGCTGCCTCAAGAATGGTA+TGG + chr3_2:75299934-75299953 Msa0424940:CDS 55.0%
CATGTGTCCTCGCCCAAGTA+GGG - chr3_2:75299978-75299997 None:intergenic 55.0%
AGTTACCCTGCCGAACCTTG+GGG - chr3_2:75300396-75300415 None:intergenic 55.0%
! TGCTGACGACCTTTCTGGGA+AGG + chr3_2:75301298-75301317 Msa0424940:CDS 55.0%
ACTGGACAATCAGGTCGCAC+TGG - chr3_2:75301444-75301463 None:intergenic 55.0%
AGTGCGACCTGATTGTCCAG+TGG + chr3_2:75301443-75301462 Msa0424940:CDS 55.0%
GCATCGCTTCCTCCAGCAAA+TGG - chr3_2:75302708-75302727 None:intergenic 55.0%
GCCGAAGGATGCAATGCTGA+AGG + chr3_2:75302726-75302745 Msa0424940:CDS 55.0%
! GGATGCAATGCTGAAGGCAC+GGG + chr3_2:75302732-75302751 Msa0424940:CDS 55.0%
! GATGCAATGCTGAAGGCACG+GGG + chr3_2:75302733-75302752 Msa0424940:CDS 55.0%
!! TCCGCTTGAGTTGGGGTGTA+AGG - chr3_2:75302837-75302856 None:intergenic 55.0%
TAAGGACGAGCTCTCAACGG+CGG + chr3_2:75303762-75303781 Msa0424940:three_prime_UTR 55.0%
!! GGAAGCACCGTCAGTGTCAC+CGG - chr3_2:75295798-75295817 None:intergenic 60.0%
GCTTCCCCTGCTTCACCAGA+CGG + chr3_2:75295812-75295831 Msa0424940:CDS 60.0%
AGGTCCGTCTGGTGAAGCAG+GGG - chr3_2:75295819-75295838 None:intergenic 60.0%
GGCAATTGGGTGGGGACACA+AGG - chr3_2:75296108-75296127 None:intergenic 60.0%
TGTGGCAGGGCAATTGGGTG+GGG - chr3_2:75296116-75296135 None:intergenic 60.0%
GTTGTGGCAGGGCAATTGGG+TGG - chr3_2:75296118-75296137 None:intergenic 60.0%
GGCTCCGTTTGGGAGTTTGG+AGG + chr3_2:75298309-75298328 Msa0424940:intron 60.0%
CGTTTGGGAGTTTGGAGGGG+AGG + chr3_2:75298314-75298333 Msa0424940:intron 60.0%
GAGGGGAGGGAGAGTAACAG+AGG + chr3_2:75298328-75298347 Msa0424940:intron 60.0%
GGAGTTTAGGAGTGGAGGGG+AGG - chr3_2:75298621-75298640 None:intergenic 60.0%
GGGGATTCGCGCTTATCCTC+AGG - chr3_2:75299139-75299158 None:intergenic 60.0%
AGGATAAGCGCGAATCCCCC+AGG + chr3_2:75299140-75299159 Msa0424940:intron 60.0%
GGGTATTCCCTACTTGGGCG+AGG + chr3_2:75299968-75299987 Msa0424940:CDS 60.0%
GCATGTGTCCTCGCCCAAGT+AGG - chr3_2:75299979-75299998 None:intergenic 60.0%
ACGAGCTCTCAACGGCGGTT+AGG + chr3_2:75303767-75303786 Msa0424940:three_prime_UTR 60.0%
!! CCAATAGCACTGGCGGGTCG+CGG + chr3_2:75296935-75296954 Msa0424940:CDS 65.0%
GGGTCGCGGACACCGTGTTA+TGG + chr3_2:75296949-75296968 Msa0424940:CDS 65.0%
AGGAGTGGAGGGGAGGGCTT+TGG - chr3_2:75298614-75298633 None:intergenic 65.0%
GGGTTGCAGGCCCCAAGGTT+CGG + chr3_2:75300383-75300402 Msa0424940:intron 65.0%
GCTGGAGGAAGCGATGCCGA+AGG + chr3_2:75302711-75302730 Msa0424940:CDS 65.0%
! TTGAGCGGCGGCCTTTTCCC+AGG - chr3_2:75303288-75303307 None:intergenic 65.0%
CCGCGACCCGCCAGTGCTAT+TGG - chr3_2:75296938-75296957 None:intergenic 70.0%
GCAAGGGGTTGCAGGCCCCA+AGG + chr3_2:75300378-75300397 Msa0424940:intron 70.0%
TGCAGGCCCCAAGGTTCGGC+AGG + chr3_2:75300387-75300406 Msa0424940:intron 70.0%
GCAGGCCCCAAGGTTCGGCA+GGG + chr3_2:75300388-75300407 Msa0424940:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 75295365 75304028 75295365 ID=Msa0424940;Name=Msa0424940
chr3_2 mRNA 75295365 75304028 75295365 ID=Msa0424940-mRNA-1;Parent=Msa0424940;Name=Msa0424940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=276|0.92|0.93|1|0.92|1|15|673|655
chr3_2 exon 75295365 75295938 75295365 ID=Msa0424940-mRNA-1:exon:19215;Parent=Msa0424940-mRNA-1
chr3_2 exon 75296735 75297117 75296735 ID=Msa0424940-mRNA-1:exon:19216;Parent=Msa0424940-mRNA-1
chr3_2 exon 75297267 75297344 75297267 ID=Msa0424940-mRNA-1:exon:19217;Parent=Msa0424940-mRNA-1
chr3_2 exon 75297442 75297566 75297442 ID=Msa0424940-mRNA-1:exon:19218;Parent=Msa0424940-mRNA-1
chr3_2 exon 75297881 75297962 75297881 ID=Msa0424940-mRNA-1:exon:19219;Parent=Msa0424940-mRNA-1
chr3_2 exon 75299901 75300074 75299901 ID=Msa0424940-mRNA-1:exon:19220;Parent=Msa0424940-mRNA-1
chr3_2 exon 75300500 75300581 75300500 ID=Msa0424940-mRNA-1:exon:19221;Parent=Msa0424940-mRNA-1
chr3_2 exon 75301228 75301319 75301228 ID=Msa0424940-mRNA-1:exon:19222;Parent=Msa0424940-mRNA-1
chr3_2 exon 75301402 75301464 75301402 ID=Msa0424940-mRNA-1:exon:19223;Parent=Msa0424940-mRNA-1
chr3_2 exon 75301538 75301627 75301538 ID=Msa0424940-mRNA-1:exon:19224;Parent=Msa0424940-mRNA-1
chr3_2 exon 75302222 75302346 75302222 ID=Msa0424940-mRNA-1:exon:19225;Parent=Msa0424940-mRNA-1
chr3_2 exon 75302494 75302602 75302494 ID=Msa0424940-mRNA-1:exon:19226;Parent=Msa0424940-mRNA-1
chr3_2 exon 75302684 75302754 75302684 ID=Msa0424940-mRNA-1:exon:19227;Parent=Msa0424940-mRNA-1
chr3_2 exon 75302943 75302982 75302943 ID=Msa0424940-mRNA-1:exon:19228;Parent=Msa0424940-mRNA-1
chr3_2 exon 75303200 75304028 75303200 ID=Msa0424940-mRNA-1:exon:19229;Parent=Msa0424940-mRNA-1
chr3_2 five_prime_UTR 75295365 75295640 75295365 ID=Msa0424940-mRNA-1:five_prime_utr;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75295641 75295938 75295641 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75296735 75297117 75296735 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75297267 75297344 75297267 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75297442 75297566 75297442 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75297881 75297962 75297881 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75299901 75300074 75299901 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75300500 75300581 75300500 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75301228 75301319 75301228 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75301402 75301464 75301402 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75301538 75301627 75301538 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75302222 75302346 75302222 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75302494 75302602 75302494 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75302684 75302754 75302684 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75302943 75302982 75302943 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 CDS 75303200 75303355 75303200 ID=Msa0424940-mRNA-1:cds;Parent=Msa0424940-mRNA-1
chr3_2 three_prime_UTR 75303356 75304028 75303356 ID=Msa0424940-mRNA-1:three_prime_utr;Parent=Msa0424940-mRNA-1
Gene Sequence

>Msa0424940

ATGGAGTCTCTTGAACTCCCTCGTCTCTTTCTCCATCATACCCGCACTTCTTCAGCTCCAACTCGACCTTCTCATACCAACAGTTCCTCACGATTCTTACCGCAATTGGCTTTCCCTTCTAAGCTCACCAAAAATGCCACCTTGCGTTCTATTTCCGGTGACACTGACGGTGCTTCCCCTGCTTCACCAGACGGACCTATTTCCTTCGAAGATGATCAAGATAGAGGTCGTTTATTATCCAGAGAGATTGATGATTTTGGTTCTCTTGTTGCCTTTCGCTTGACTCCTCATGATTCTGATTTGATGAGAGTATTACATGCAGGGACAACTGCAGAAACTCAAGGGAATTTAAGGAGCGATGACGTTGAAAAACCAGAGATTGGGAATGCAGAAGATGAGAAGGCTCAAACTATAGTAACCCGCAACATTGTTTTTGTTACATCTGAAGCTGCACCGTATTCTAAGACTGGTGGCCTTGCAGATGTTTGTGGTTCTTTGCCAATAGCACTGGCGGGTCGCGGACACCGTGTTATGGTTATCTCTCCTAGATACGTACATGGTACTGCCGCTGATAGTAAGTTTTCTAGTGCAGTTGATCTTGCTAGCCCTATCAATGTATTTTGCTTTGGAGGCGCTCAAGAAGTTGGTTTTTTCCATGAGTATAGAGAAGGTGTTGACTGGGTATTTGTGGATCACCCTTCATTCCATAGACCAGGGAATCCTTATGGAGACAAGCACGGGACGTTTAAGGATAATCAGTTTAGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCCCCATTAGTGCTTCCATTGGGAGGGTTCACTTACGGAGAAAAATGCCTATTCCTCGTTAATGATTGGCATGCCAGTTTAGTTTCAGTACTTTTGGCATCAAAGTATCGTCCACATGGGGTATATAAGGATGCACGTAGTATATTAGTGATTCACAATATTGCACACCAGGGAGTGGAACCTGCAATTACATATTGCAATTTGGGGCTGCCTCAAGAATGGTATGGAGCACTGGGATGGGTATTCCCTACTTGGGCGAGGACACATGCTCTTGACACAGGCGAAGCTGTCAATTTTCTAAAAGGCGCCATTGTTACTGCTGATCGGATAGTAACAGTAAGCAAGGGTTATTCCTGGGAGATAACAACTACAGAAGGTGGATTTGGTCTACAGGAGATACTACGAGATAGAAAGAGTATTCTGAGCGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCATCATCTGATGAACATATTGCTTCCAACTATTCTGCTGACGACCTTTCTGGGAAGGTGAAATGTAAAATTGCCTTGCAGAAGGAGTTAGGTCTTCCAGTGCGACCTGATTGTCCAGTGATTGGATTCGTTGGAAGACTTGATTACCAGAAAGGTATTGACTTGATTCGCCAGGCAATTCCAGAGCTTATGCAAGACGATGTTCAATTTGTAATGCTTGGTTCGGGAAATCCTATATATGAAGACTGGATGAGAGCAACAGAATCACTTTATAAAGATAAATTTCGTGGTTGGGTTGGATTTAATGTTCCAGTATCTCATAGAATAACTGCAGGCTGTGATATACTGTTAATGCCTTCAACATTTGAGCCTTGTGGACTAAACCAGTTGTATGCAATGAGATATGGAACTATACCAGTAGTTCATGAAACAGGGGGACTAAGAGATACTGTTCAAAATTTTAATCCATTTGCTGGAGGAAGCGATGCCGAAGGATGCAATGCTGAAGGCACGGGGTGGACGTTTTCTCCACTGACAAAGGAGAGCATGTTAGTGGCTCTAAGGTACGCCATTCAAACATATAATGAACACAAGTCTTCATGGGAGGGATTGATAAAAAGAGGTATGACGAGAGATTACACCTGGGAAAAGGCCGCCGCTCAATACGAGCAAATCATTGAGTGGGCATTCATGGATCCACCCTATTGCTGA
Protein sequence

>Msa0424940

MESLELPRLFLHHTRTSSAPTRPSHTNSSSRFLPQLAFPSKLTKNATLRSISGDTDGASPASPDGPISFEDDQDRGRLLSREIDDFGSLVAFRLTPHDSDLMRVLHAGTTAETQGNLRSDDVEKPEIGNAEDEKAQTIVTRNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYVHGTAADSKFSSAVDLASPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSFHRPGNPYGDKHGTFKDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLASKYRPHGVYKDARSILVIHNIAHQGVEPAITYCNLGLPQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTTEGGFGLQEILRDRKSILSGITNGIDVTEWDPSSDEHIASNYSADDLSGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAGGSDAEGCNAEGTGWTFSPLTKESMLVALRYAIQTYNEHKSSWEGLIKRGMTRDYTWEKAAAQYEQIIEWAFMDPPYC*