Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577920 | XP_003604116.1 | 89.518 | 353 | 29 | 2 | 30 | 376 | 31 | 381 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577920 | G7JUF2 | 89.518 | 353 | 29 | 2 | 30 | 376 | 31 | 381 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0577920 | 0.818585 | 1.815064e-52 | -8.615850e-47 |
| Msa0002700 | Msa0577920 | 0.815348 | 9.678163e-52 | -8.615850e-47 |
| Msa0011410 | Msa0577920 | 0.829934 | 3.897988e-55 | -8.615850e-47 |
| Msa0011440 | Msa0577920 | 0.813384 | 2.630819e-51 | -8.615850e-47 |
| Msa0016830 | Msa0577920 | 0.814934 | 1.196093e-51 | -8.615850e-47 |
| Msa0021570 | Msa0577920 | 0.814293 | 1.658556e-51 | -8.615850e-47 |
| Msa0030710 | Msa0577920 | 0.815833 | 7.550224e-52 | -8.615850e-47 |
| Msa0037040 | Msa0577920 | 0.812609 | 3.889515e-51 | -8.615850e-47 |
| Msa0038860 | Msa0577920 | 0.817908 | 2.583783e-52 | -8.615850e-47 |
| Msa0049670 | Msa0577920 | 0.823298 | 1.493314e-53 | -8.615850e-47 |
| Msa0056220 | Msa0577920 | 0.809260 | 2.066013e-50 | -8.615850e-47 |
| Msa0056230 | Msa0577920 | 0.805434 | 1.337425e-49 | -8.615850e-47 |
| Msa0065190 | Msa0577920 | 0.813423 | 2.578508e-51 | -8.615850e-47 |
| Msa0069590 | Msa0577920 | 0.813133 | 2.986224e-51 | -8.615850e-47 |
| Msa0075080 | Msa0577920 | 0.801796 | 7.605095e-49 | -8.615850e-47 |
| Msa0078110 | Msa0577920 | 0.817438 | 3.297693e-52 | -8.615850e-47 |
| Msa0080100 | Msa0577920 | 0.818991 | 1.467781e-52 | -8.615850e-47 |
| Msa0083200 | Msa0577920 | 0.813692 | 2.250218e-51 | -8.615850e-47 |
| Msa0086370 | Msa0577920 | -0.804785 | 1.828079e-49 | -8.615850e-47 |
| Msa0095210 | Msa0577920 | 0.800875 | 1.173612e-48 | -8.615850e-47 |
| Msa0102290 | Msa0577920 | 0.807208 | 5.654256e-50 | -8.615850e-47 |
| Msa0105140 | Msa0577920 | 0.833733 | 4.501648e-56 | -8.615850e-47 |
| Msa0116780 | Msa0577920 | 0.824987 | 5.991564e-54 | -8.615850e-47 |
| Msa0138380 | Msa0577920 | 0.813572 | 2.391796e-51 | -8.615850e-47 |
| Msa0141090 | Msa0577920 | 0.825597 | 4.298784e-54 | -8.615850e-47 |
| Msa0145990 | Msa0577920 | 0.814819 | 1.268713e-51 | -8.615850e-47 |
| Msa0151380 | Msa0577920 | 0.816129 | 6.482545e-52 | -8.615850e-47 |
| Msa0151510 | Msa0577920 | 0.803822 | 2.901800e-49 | -8.615850e-47 |
| Msa0154880 | Msa0577920 | 0.800520 | 1.387040e-48 | -8.615850e-47 |
| Msa0168470 | Msa0577920 | 0.802090 | 6.615527e-49 | -8.615850e-47 |
| Msa0170550 | Msa0577920 | 0.806915 | 6.524446e-50 | -8.615850e-47 |
| Msa0173880 | Msa0577920 | 0.805416 | 1.349127e-49 | -8.615850e-47 |
| Msa0181740 | Msa0577920 | 0.820281 | 7.453716e-53 | -8.615850e-47 |
| Msa0186750 | Msa0577920 | 0.815992 | 6.956534e-52 | -8.615850e-47 |
| Msa0213020 | Msa0577920 | 0.806678 | 7.318979e-50 | -8.615850e-47 |
| Msa0216010 | Msa0577920 | 0.817250 | 3.635244e-52 | -8.615850e-47 |
| Msa0219720 | Msa0577920 | 0.804256 | 2.357622e-49 | -8.615850e-47 |
| Msa0225050 | Msa0577920 | 0.801981 | 6.966377e-49 | -8.615850e-47 |
| Msa0225790 | Msa0577920 | 0.810677 | 1.023350e-50 | -8.615850e-47 |
| Msa0228320 | Msa0577920 | 0.969394 | 4.660033e-130 | -8.615850e-47 |
| Msa0228360 | Msa0577920 | 0.825618 | 4.248843e-54 | -8.615850e-47 |
| Msa0368450 | Msa0577920 | 0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0369080 | Msa0577920 | 0.821947 | 3.079413e-53 | -8.615850e-47 |
| Msa0369580 | Msa0577920 | 0.886498 | 3.246858e-72 | -8.615850e-47 |
| Msa0370350 | Msa0577920 | 0.807265 | 5.499200e-50 | -8.615850e-47 |
| Msa0374840 | Msa0577920 | 0.825410 | 4.758802e-54 | -8.615850e-47 |
| Msa0375100 | Msa0577920 | 0.833103 | 6.462753e-56 | -8.615850e-47 |
| Msa0375930 | Msa0577920 | 0.832802 | 7.676789e-56 | -8.615850e-47 |
| Msa0377690 | Msa0577920 | 0.820108 | 8.165411e-53 | -8.615850e-47 |
| Msa0378440 | Msa0577920 | 0.821773 | 3.378310e-53 | -8.615850e-47 |
| Msa0381370 | Msa0577920 | 0.843063 | 1.763634e-58 | -8.615850e-47 |
| Msa0388750 | Msa0577920 | -0.804217 | 2.401521e-49 | -8.615850e-47 |
| Msa0404530 | Msa0577920 | 0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0416430 | Msa0577920 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0417000 | Msa0577920 | 0.879680 | 1.022277e-69 | -8.615850e-47 |
| Msa0422520 | Msa0577920 | 0.833842 | 4.227810e-56 | -8.615850e-47 |
| Msa0424570 | Msa0577920 | 0.831788 | 1.368968e-55 | -8.615850e-47 |
| Msa0424940 | Msa0577920 | 0.842079 | 3.218269e-58 | -8.615850e-47 |
| Msa0426680 | Msa0577920 | 0.842867 | 1.989446e-58 | -8.615850e-47 |
| Msa0426890 | Msa0577920 | 0.816786 | 4.621575e-52 | -8.615850e-47 |
| Msa0427890 | Msa0577920 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa0463030 | Msa0577920 | 0.812615 | 3.877199e-51 | -8.615850e-47 |
| Msa0463820 | Msa0577920 | 0.862339 | 5.436210e-64 | -8.615850e-47 |
| Msa0474120 | Msa0577920 | 0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa0240460 | Msa0577920 | 0.819791 | 9.648987e-53 | -8.615850e-47 |
| Msa0260930 | Msa0577920 | 0.809764 | 1.610618e-50 | -8.615850e-47 |
| Msa0261020 | Msa0577920 | 0.834077 | 3.690905e-56 | -8.615850e-47 |
| Msa0269610 | Msa0577920 | 0.804241 | 2.373850e-49 | -8.615850e-47 |
| Msa0274530 | Msa0577920 | 0.812294 | 4.558038e-51 | -8.615850e-47 |
| Msa0292300 | Msa0577920 | 0.802022 | 6.831996e-49 | -8.615850e-47 |
| Msa0293000 | Msa0577920 | 0.800055 | 1.724774e-48 | -8.615850e-47 |
| Msa0293060 | Msa0577920 | 0.852974 | 3.246510e-61 | -8.615850e-47 |
| Msa0302020 | Msa0577920 | 0.803946 | 2.734756e-49 | -8.615850e-47 |
| Msa0317820 | Msa0577920 | 0.826235 | 3.031769e-54 | -8.615850e-47 |
| Msa0336550 | Msa0577920 | 0.821201 | 4.578181e-53 | -8.615850e-47 |
| Msa0363090 | Msa0577920 | 0.803234 | 3.842574e-49 | -8.615850e-47 |
| Msa0483230 | Msa0577920 | 0.831730 | 1.414218e-55 | -8.615850e-47 |
| Msa0483410 | Msa0577920 | 0.845696 | 3.456275e-59 | -8.615850e-47 |
| Msa0504810 | Msa0577920 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0507960 | Msa0577920 | 0.807489 | 4.929063e-50 | -8.615850e-47 |
| Msa0508620 | Msa0577920 | 0.809278 | 2.047863e-50 | -8.615850e-47 |
| Msa0508660 | Msa0577920 | 0.806818 | 6.837805e-50 | -8.615850e-47 |
| Msa0511600 | Msa0577920 | 0.811302 | 7.494868e-51 | -8.615850e-47 |
| Msa0516000 | Msa0577920 | 0.836125 | 1.123736e-56 | -8.615850e-47 |
| Msa0516340 | Msa0577920 | 0.855941 | 4.499497e-62 | -8.615850e-47 |
| Msa0530220 | Msa0577920 | 0.807283 | 5.452331e-50 | -8.615850e-47 |
| Msa0558800 | Msa0577920 | 0.813723 | 2.215904e-51 | -8.615850e-47 |
| Msa0559440 | Msa0577920 | 0.816959 | 4.225123e-52 | -8.615850e-47 |
| Msa0559640 | Msa0577920 | 0.819908 | 9.072379e-53 | -8.615850e-47 |
| Msa0571220 | Msa0577920 | 0.802318 | 5.937285e-49 | -8.615850e-47 |
| Msa0574230 | Msa0577920 | 0.832637 | 8.439981e-56 | -8.615850e-47 |
| Msa0576510 | Msa0577920 | 0.830700 | 2.533094e-55 | -8.615850e-47 |
| Msa0577920 | Msa0577960 | 0.823286 | 1.503463e-53 | -8.615850e-47 |
| Msa0577920 | Msa0581090 | 0.801233 | 9.919950e-49 | -8.615850e-47 |
| Msa0577920 | Msa0616570 | 0.815094 | 1.102472e-51 | -8.615850e-47 |
| Msa0577920 | Msa0617010 | 0.813711 | 2.228599e-51 | -8.615850e-47 |
| Msa0577920 | Msa0622800 | 0.822369 | 2.457378e-53 | -8.615850e-47 |
| Msa0577920 | Msa0624260 | 0.812774 | 3.578787e-51 | -8.615850e-47 |
| Msa0577920 | Msa0624360 | 0.814909 | 1.211561e-51 | -8.615850e-47 |
| Msa0577920 | Msa0625510 | 0.928619 | 2.234552e-92 | -8.615850e-47 |
| Msa0577920 | Msa0625550 | 0.822475 | 2.322987e-53 | -8.615850e-47 |
| Msa0577920 | Msa0638550 | 0.800657 | 1.300274e-48 | -8.615850e-47 |
| Msa0577920 | Msa0646310 | 0.800825 | 1.201800e-48 | -8.615850e-47 |
| Msa0577920 | Msa0654500 | 0.825578 | 4.343330e-54 | -8.615850e-47 |
| Msa0577920 | Msa0655980 | 0.813036 | 3.135859e-51 | -8.615850e-47 |
| Msa0577920 | Msa0656570 | 0.816763 | 4.675518e-52 | -8.615850e-47 |
| Msa0577920 | Msa0670280 | -0.805017 | 1.635460e-49 | -8.615850e-47 |
| Msa0577920 | Msa0676570 | 0.801812 | 7.546703e-49 | -8.615850e-47 |
| Msa0577920 | Msa0684390 | -0.815961 | 7.070210e-52 | -8.615850e-47 |
| Msa0577920 | Msa0685390 | 0.805964 | 1.034992e-49 | -8.615850e-47 |
| Msa0577920 | Msa0694810 | 0.820255 | 7.553458e-53 | -8.615850e-47 |
| Msa0577920 | Msa0699900 | 0.815336 | 9.738893e-52 | -8.615850e-47 |
| Msa0577920 | Msa0700870 | 0.820463 | 6.769183e-53 | -8.615850e-47 |
| Msa0577920 | Msa0700930 | 0.823575 | 1.286494e-53 | -8.615850e-47 |
| Msa0577920 | Msa0707870 | 0.820356 | 7.162978e-53 | -8.615850e-47 |
| Msa0577920 | Msa0708840 | 0.814079 | 1.849314e-51 | -8.615850e-47 |
| Msa0577920 | Msa0711860 | 0.816860 | 4.448108e-52 | -8.615850e-47 |
| Msa0577920 | Msa0729120 | 0.852825 | 3.580177e-61 | -8.615850e-47 |
| Msa0577920 | Msa0729590 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa0577920 | Msa0742690 | 0.807127 | 5.883612e-50 | -8.615850e-47 |
| Msa0577920 | Msa0743280 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0577920 | Msa0745630 | 0.819039 | 1.431663e-52 | -8.615850e-47 |
| Msa0577920 | Msa0748470 | 0.803183 | 3.936650e-49 | -8.615850e-47 |
| Msa0577920 | Msa0750200 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0577920 | Msa0754790 | 0.814681 | 1.361106e-51 | -8.615850e-47 |
| Msa0577920 | Msa0754840 | 0.831602 | 1.521023e-55 | -8.615850e-47 |
| Msa0577920 | Msa0762390 | 0.809125 | 2.208077e-50 | -8.615850e-47 |
| Msa0577920 | Msa0766910 | 0.838666 | 2.511084e-57 | -8.615850e-47 |
| Msa0577920 | Msa0786600 | 0.846051 | 2.768809e-59 | -8.615850e-47 |
| Msa0577920 | Msa0799150 | 0.823060 | 1.697446e-53 | -8.615850e-47 |
| Msa0577920 | Msa0807840 | 0.860461 | 2.033305e-63 | -8.615850e-47 |
| Msa0577920 | Msa0822380 | 0.819175 | 1.333046e-52 | -8.615850e-47 |
| Msa0577920 | Msa0822680 | 0.848742 | 5.047532e-60 | -8.615850e-47 |
| Msa0577920 | Msa0827560 | 0.812180 | 4.827337e-51 | -8.615850e-47 |
| Msa0577920 | Msa0833360 | 0.800376 | 1.483674e-48 | -8.615850e-47 |
| Msa0577920 | Msa0833910 | 0.810694 | 1.014786e-50 | -8.615850e-47 |
| Msa0577920 | Msa0848780 | 0.828774 | 7.457383e-55 | -8.615850e-47 |
| Msa0577920 | Msa0862750 | 0.800251 | 1.572973e-48 | -8.615850e-47 |
| Msa0577920 | Msa0863470 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0577920 | Msa0866310 | 0.855050 | 8.179380e-62 | -8.615850e-47 |
| Msa0577920 | Msa0866510 | 0.842557 | 2.405202e-58 | -8.615850e-47 |
| Msa0577920 | Msa0878090 | 0.810281 | 1.246383e-50 | -8.615850e-47 |
| Msa0577920 | Msa0879940 | 0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa0577920 | Msa0880200 | 0.800513 | 1.391391e-48 | -8.615850e-47 |
| Msa0577920 | Msa0883880 | 0.823259 | 1.524853e-53 | -8.615850e-47 |
| Msa0577920 | Msa0907520 | 0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0577920 | Msa0930150 | 0.800312 | 1.529033e-48 | -8.615850e-47 |
| Msa0577920 | Msa0932040 | 0.800009 | 1.762257e-48 | -8.615850e-47 |
| Msa0577920 | Msa0940400 | 0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa0577920 | Msa0943870 | 0.811711 | 6.105746e-51 | -8.615850e-47 |
| Msa0577920 | Msa0961200 | 0.820368 | 7.117262e-53 | -8.615850e-47 |
| Msa0577920 | Msa0967920 | 0.803352 | 3.632726e-49 | -8.615850e-47 |
| Msa0577920 | Msa0970160 | 0.806501 | 7.978296e-50 | -8.615850e-47 |
| Msa0577920 | Msa1010900 | 0.829577 | 4.763422e-55 | -8.615850e-47 |
| Msa0577920 | Msa1011140 | 0.828148 | 1.055868e-54 | -8.615850e-47 |
| Msa0577920 | Msa1016450 | 0.800701 | 1.273967e-48 | -8.615850e-47 |
| Msa0577920 | Msa1017610 | 0.814384 | 1.583221e-51 | -8.615850e-47 |
| Msa0577920 | Msa1020620 | -0.803387 | 3.571525e-49 | -8.615850e-47 |
| Msa0577920 | Msa1031190 | 0.807427 | 5.083037e-50 | -8.615850e-47 |
| Msa0577920 | Msa1042420 | 0.804804 | 1.811544e-49 | -8.615850e-47 |
| Msa0577920 | Msa1044520 | 0.856739 | 2.623723e-62 | -8.615850e-47 |
| Msa0577920 | Msa1051410 | 0.804644 | 1.956571e-49 | -8.615850e-47 |
| Msa0577920 | Msa1057940 | 0.802625 | 5.134394e-49 | -8.615850e-47 |
| Msa0577920 | Msa1070370 | 0.806982 | 6.313888e-50 | -8.615850e-47 |
| Msa0577920 | Msa1078210 | 0.810312 | 1.227175e-50 | -8.615850e-47 |
| Msa0577920 | Msa1081950 | 0.816307 | 5.916272e-52 | -8.615850e-47 |
| Msa0577920 | Msa1084630 | 0.846298 | 2.371883e-59 | -8.615850e-47 |
| Msa0577920 | Msa1119420 | 0.804243 | 2.372417e-49 | -8.615850e-47 |
| Msa0577920 | Msa1121580 | 0.823375 | 1.433086e-53 | -8.615850e-47 |
| Msa0577920 | Msa1126790 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0577920 | Msa1126810 | 0.805885 | 1.075521e-49 | -8.615850e-47 |
| Msa0577920 | Msa1137240 | 0.801644 | 8.169280e-49 | -8.615850e-47 |
| Msa0577920 | Msa1140700 | 0.809268 | 2.058075e-50 | -8.615850e-47 |
| Msa0577920 | Msa1156270 | 0.801388 | 9.218592e-49 | -8.615850e-47 |
| Msa0577920 | Msa1158180 | 0.804884 | 1.743698e-49 | -8.615850e-47 |
| Msa0577920 | Msa1161550 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
| Msa0577920 | Msa1171640 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0577920 | Msa1175970 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0577920 | Msa1182960 | 0.804671 | 1.931074e-49 | -8.615850e-47 |
| Msa0577920 | Msa1190300 | 0.810108 | 1.357993e-50 | -8.615850e-47 |
| Msa0577920 | Msa1190320 | 0.821953 | 3.069456e-53 | -8.615850e-47 |
| Msa0577920 | Msa1199540 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0577920 | Msa1199690 | 0.816289 | 5.972599e-52 | -8.615850e-47 |
| Msa0577920 | Msa1203860 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
| Msa0577920 | Msa1207660 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0577920 | Msa1212150 | 0.800392 | 1.472329e-48 | -8.615850e-47 |
| Msa0577920 | Msa1215660 | 0.818864 | 1.569304e-52 | -8.615850e-47 |
| Msa0577920 | Msa1219530 | 0.816311 | 5.904771e-52 | -8.615850e-47 |
| Msa0577920 | Msa1226330 | 0.815003 | 1.154643e-51 | -8.615850e-47 |
| Msa0577920 | Msa1236990 | 0.817297 | 3.547582e-52 | -8.615850e-47 |
| Msa0577920 | Msa1264300 | 0.864571 | 1.105256e-64 | -8.615850e-47 |
| Msa0577920 | Msa1267800 | 0.804974 | 1.669148e-49 | -8.615850e-47 |
| Msa0577920 | Msa1278080 | 0.822864 | 1.885843e-53 | -8.615850e-47 |
| Msa0577920 | Msa1279200 | 0.805339 | 1.400058e-49 | -8.615850e-47 |
| Msa0577920 | Msa1290090 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa0577920 | Msa1292700 | 0.831576 | 1.543578e-55 | -8.615850e-47 |
| Msa0577920 | Msa1296270 | 0.816626 | 5.020074e-52 | -8.615850e-47 |
| Msa0577920 | Msa1301410 | 0.824917 | 6.225694e-54 | -8.615850e-47 |
| Msa0577920 | Msa1317340 | 0.810385 | 1.183459e-50 | -8.615850e-47 |
| Msa0577920 | Msa1328680 | 0.804230 | 2.386495e-49 | -8.615850e-47 |
| Msa0577920 | Msa1332340 | 0.807798 | 4.238190e-50 | -8.615850e-47 |
| Msa0577920 | Msa1333220 | 0.804391 | 2.209201e-49 | -8.615850e-47 |
| Msa0577920 | Msa1334350 | 0.858300 | 9.057600e-63 | -8.615850e-47 |
| Msa0577920 | Msa1335130 | 0.802116 | 6.535529e-49 | -8.615850e-47 |
| Msa0577920 | Msa1351380 | 0.850138 | 2.060397e-60 | -8.615850e-47 |
| Msa0577920 | Msa1352840 | 0.802105 | 6.570511e-49 | -8.615850e-47 |
| Msa0577920 | Msa1356500 | 0.803434 | 3.492476e-49 | -8.615850e-47 |
| Msa0577920 | Msa1374210 | 0.824696 | 7.017192e-54 | -8.615850e-47 |
| Msa0577920 | Msa1374610 | 0.810380 | 1.186367e-50 | -8.615850e-47 |
| Msa0577920 | Msa1375650 | 0.807652 | 4.552770e-50 | -8.615850e-47 |
| Msa0577920 | Msa1386180 | 0.823519 | 1.325645e-53 | -8.615850e-47 |
| Msa0577920 | Msa1386910 | 0.802783 | 4.762478e-49 | -8.615850e-47 |
| Msa0577920 | Msa1387100 | 0.803808 | 2.921090e-49 | -8.615850e-47 |
| Msa0577920 | Msa1388070 | 0.809807 | 1.576147e-50 | -8.615850e-47 |
| Msa0577920 | Msa1389990 | 0.807919 | 3.994465e-50 | -8.615850e-47 |
| Msa0577920 | Msa1392650 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0577920 | Msa1397560 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0577920 | Msa1400330 | 0.847735 | 9.581464e-60 | -8.615850e-47 |
| Msa0577920 | Msa1402340 | 0.858501 | 7.887903e-63 | -8.615850e-47 |
| Msa0577920 | Msa1405040 | 0.828490 | 8.733983e-55 | -8.615850e-47 |
| Msa0577920 | Msa1409360 | 0.817473 | 3.237928e-52 | -8.615850e-47 |
| Msa0577920 | Msa1412450 | 0.810244 | 1.269335e-50 | -8.615850e-47 |
| Msa0577920 | Msa1421490 | 0.832523 | 9.003020e-56 | -8.615850e-47 |
| Msa0577920 | Msa1422820 | 0.839552 | 1.480329e-57 | -8.615850e-47 |
| Msa0577920 | Msa1427900 | 0.811072 | 8.406940e-51 | -8.615850e-47 |
| Msa0577920 | Msa1448410 | 0.859432 | 4.153243e-63 | -8.615850e-47 |
| Msa0577920 | Msa1451200 | 0.811753 | 5.980408e-51 | -8.615850e-47 |
| Msa0577920 | Msa1451310 | 0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0577920 | Msa1452230 | 0.811662 | 6.258315e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577920 | MtrunA17_Chr4g0000091 | 89.518 | 353 | 29 | 2 | 30 | 376 | 31 | 381 | 0.0 | 630 |
| Msa0577920 | MtrunA17_Chr3g0127861 | 30.938 | 320 | 189 | 8 | 40 | 344 | 94 | 396 | 1.81e-40 | 148 |
| Msa0577920 | MtrunA17_Chr1g0189151 | 31.293 | 294 | 173 | 9 | 64 | 344 | 91 | 368 | 9.27e-37 | 137 |
| Msa0577920 | MtrunA17_Chr5g0395041 | 26.769 | 325 | 217 | 7 | 40 | 347 | 111 | 431 | 5.89e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577920 | AT3G13062.1 | 57.182 | 369 | 147 | 7 | 14 | 375 | 35 | 399 | 4.91e-141 | 407 |
| Msa0577920 | AT1G55960.1 | 59.509 | 326 | 122 | 4 | 59 | 376 | 77 | 400 | 4.91e-141 | 407 |
| Msa0577920 | AT3G13062.2 | 57.182 | 369 | 147 | 7 | 14 | 375 | 35 | 399 | 1.29e-140 | 407 |
| Msa0577920 | AT3G13062.3 | 55.703 | 377 | 148 | 7 | 14 | 375 | 35 | 407 | 2.34e-138 | 400 |
| Msa0577920 | AT1G55960.2 | 53.067 | 326 | 118 | 5 | 59 | 376 | 77 | 375 | 2.15e-117 | 346 |
| Msa0577920 | AT1G64720.1 | 30.573 | 314 | 182 | 9 | 46 | 344 | 66 | 358 | 6.12e-41 | 149 |
| Msa0577920 | AT4G14500.1 | 32.016 | 253 | 161 | 5 | 57 | 302 | 129 | 377 | 2.87e-39 | 145 |
| Msa0577920 | AT5G54170.1 | 28.483 | 323 | 213 | 7 | 60 | 375 | 124 | 435 | 9.09e-37 | 139 |
| Msa0577920 | AT3G23080.2 | 31.050 | 219 | 142 | 4 | 60 | 271 | 85 | 301 | 3.15e-32 | 125 |
| Msa0577920 | AT3G23080.3 | 31.050 | 219 | 142 | 4 | 60 | 271 | 85 | 301 | 3.15e-32 | 125 |
| Msa0577920 | AT3G23080.1 | 31.472 | 197 | 127 | 3 | 82 | 271 | 137 | 332 | 4.05e-32 | 125 |
| Msa0577920 | AT4G14500.2 | 29.801 | 151 | 101 | 3 | 57 | 204 | 129 | 277 | 1.01e-17 | 83.2 |
Find 85 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTAGGTTTGCAGGATT+TGG | 0.251778 | 4_1:-82290711 | None:intergenic |
| ATCAGTAACCTTAGGTTTGC+AGG | 0.256518 | 4_1:-82290717 | None:intergenic |
| ACTATTGGCTAACAACTTCT+TGG | 0.298347 | 4_1:-82293779 | None:intergenic |
| ATCTAAATGAGAATGCTAAA+TGG | 0.314684 | 4_1:+82290645 | Msa0577920:CDS |
| CCAATAGTGTGCTGCTTGTA+GGG | 0.339546 | 4_1:+82293794 | Msa0577920:CDS |
| GACCGTGTTCAATAATATTT+CGG | 0.348371 | 4_1:+82291822 | Msa0577920:CDS |
| CTAGAGAATACGTGCTAACT+TGG | 0.350444 | 4_1:+82291989 | Msa0577920:CDS |
| GTACCTAGATGGGTTTAAAT+TGG | 0.366540 | 4_1:-82290325 | None:intergenic |
| GCCAATAGTGTGCTGCTTGT+AGG | 0.372270 | 4_1:+82293793 | Msa0577920:CDS |
| AATATTGTTTGGTTGAAACT+TGG | 0.375184 | 4_1:+82294134 | Msa0577920:three_prime_UTR |
| ATGAACATCTATGGCAGTTC+GGG | 0.381365 | 4_1:+82290168 | Msa0577920:CDS |
| TTCAGTCAATTTAATGCAAA+AGG | 0.385709 | 4_1:+82293075 | Msa0577920:CDS |
| GAAATAGGTACGTACCTAGA+TGG | 0.396481 | 4_1:-82290336 | None:intergenic |
| TTAGGAATGTGAACATACTT+TGG | 0.398158 | 4_1:+82292510 | Msa0577920:intron |
| GACTGAACTGTTAACTGAAC+TGG | 0.403147 | 4_1:-82293059 | None:intergenic |
| GAATGTGGAGATGGCAAAAC+TGG | 0.403229 | 4_1:+82292955 | Msa0577920:CDS |
| AGAGAGATTCGTTGTGTGGA+GGG | 0.403527 | 4_1:+82290129 | Msa0577920:five_prime_UTR |
| CTACCAATTTAAACCCATCT+AGG | 0.411083 | 4_1:+82290322 | Msa0577920:CDS |
| TCTAAATGAGAATGCTAAAT+GGG | 0.425962 | 4_1:+82290646 | Msa0577920:CDS |
| TTGGAAATTGTGGGAGGGGA+AGG | 0.429664 | 4_1:+82292008 | Msa0577920:CDS |
| TGGGTTTAAATTGGTAGAAT+CGG | 0.437970 | 4_1:-82290316 | None:intergenic |
| GTAAAGATGATGAACATCTA+TGG | 0.441520 | 4_1:+82290159 | Msa0577920:exon |
| CCCTACAAGCAGCACACTAT+TGG | 0.441576 | 4_1:-82293794 | None:intergenic |
| GATGAACATCTATGGCAGTT+CGG | 0.444323 | 4_1:+82290167 | Msa0577920:CDS |
| ATGAAGGAGTATCACAAGAT+AGG | 0.454770 | 4_1:+82290067 | Msa0577920:five_prime_UTR |
| TACAAAGCTCCATATGCCTT+TGG | 0.455824 | 4_1:-82292984 | None:intergenic |
| ACGTGCTAACTTGGAAATTG+TGG | 0.456235 | 4_1:+82291998 | Msa0577920:CDS |
| CAAGTTAGCACGTATTCTCT+AGG | 0.463689 | 4_1:-82291988 | None:intergenic |
| AAATCTGATGGTTCTGAAGT+TGG | 0.471935 | 4_1:+82291934 | Msa0577920:CDS |
| TGTATAGGTACCGGCTTGCT+TGG | 0.473815 | 4_1:+82293660 | Msa0577920:intron |
| TATTCTCTAGGTTTCAAAAG+AGG | 0.479731 | 4_1:-82291976 | None:intergenic |
| GTTTGATCATGAATGATAGT+AGG | 0.489865 | 4_1:-82293715 | None:intergenic |
| GGATGTTGTTGTTGTTGAAT+CGG | 0.499572 | 4_1:-82290283 | None:intergenic |
| CGTGCTAACTTGGAAATTGT+GGG | 0.500606 | 4_1:+82291999 | Msa0577920:CDS |
| CAATGACTACAGAAAACAAT+GGG | 0.504178 | 4_1:+82291873 | Msa0577920:CDS |
| CACGGCAGAATAAATATGTA+CGG | 0.508876 | 4_1:+82292536 | Msa0577920:CDS |
| AGATTCGTTGTGTGGAGGGG+AGG | 0.509697 | 4_1:+82290133 | Msa0577920:five_prime_UTR |
| CTAGGTGCTAAAGTTGCAAT+GGG | 0.510640 | 4_1:+82293850 | Msa0577920:CDS |
| ATGTTTCATCAAGAAGATGC+TGG | 0.515286 | 4_1:+82292929 | Msa0577920:CDS |
| GGGAACACGGGGAGAAATGA+AGG | 0.518515 | 4_1:+82290051 | None:intergenic |
| CCTAGGTGCTAAAGTTGCAA+TGG | 0.518576 | 4_1:+82293849 | Msa0577920:CDS |
| TAACTTGGAAATTGTGGGAG+GGG | 0.526844 | 4_1:+82292004 | Msa0577920:CDS |
| ATTCTCTAGGTTTCAAAAGA+GGG | 0.532340 | 4_1:-82291975 | None:intergenic |
| TTGGCTAACAACTTCTTGGA+TGG | 0.533883 | 4_1:-82293775 | None:intergenic |
| TGCCAAATCCTGCAAACCTA+AGG | 0.543122 | 4_1:+82290709 | Msa0577920:CDS |
| AAATAGGTACGTACCTAGAT+GGG | 0.548158 | 4_1:-82290335 | None:intergenic |
| TCACGTGGTCACTCTAGCCT+AGG | 0.548358 | 4_1:+82293832 | Msa0577920:CDS |
| GAAGATACTCTGCTGCAAGC+TGG | 0.548902 | 4_1:+82293029 | Msa0577920:CDS |
| GAGAGATTCGTTGTGTGGAG+GGG | 0.551270 | 4_1:+82290130 | Msa0577920:five_prime_UTR |
| ATCTCACAGGCATTTCTACC+AGG | 0.552255 | 4_1:-82292902 | None:intergenic |
| AAGAGAGATTCGTTGTGTGG+AGG | 0.557552 | 4_1:+82290128 | Msa0577920:five_prime_UTR |
| GGTAGAATCGGAGACGAAAG+AGG | 0.558156 | 4_1:-82290304 | None:intergenic |
| GGTTGAGCACAATCAACTGC+AGG | 0.572742 | 4_1:+82291906 | Msa0577920:CDS |
| ATGAAACATTGTGATCTCAC+AGG | 0.577864 | 4_1:-82292915 | None:intergenic |
| ATGGAGCTTTGTATGCAAGA+TGG | 0.577968 | 4_1:+82292994 | Msa0577920:CDS |
| AGTATCACAAGATAGGTTTG+TGG | 0.584877 | 4_1:+82290074 | Msa0577920:five_prime_UTR |
| CCATTGCAACTTTAGCACCT+AGG | 0.588447 | 4_1:-82293849 | None:intergenic |
| CTGCAGGTGGACAAATCTGA+TGG | 0.593077 | 4_1:+82291922 | Msa0577920:CDS |
| ACGGCAGAATAAATATGTAC+GGG | 0.595469 | 4_1:+82292537 | Msa0577920:CDS |
| CGTACATATTTATTCTGCCG+TGG | 0.595658 | 4_1:-82292535 | None:intergenic |
| GTGAACATACTTTGGCTCCA+CGG | 0.602406 | 4_1:+82292518 | Msa0577920:CDS |
| TAAAAGAGAGATTCGTTGTG+TGG | 0.605518 | 4_1:+82290125 | Msa0577920:five_prime_UTR |
| CTAACTTGGAAATTGTGGGA+GGG | 0.610138 | 4_1:+82292003 | Msa0577920:CDS |
| GTCACACTCAAATATCTCAA+GGG | 0.610413 | 4_1:-82291802 | None:intergenic |
| TGCTGGTTTGAATGTGGAGA+TGG | 0.613421 | 4_1:+82292946 | Msa0577920:CDS |
| TTGTACGATTTATGTATACG+TGG | 0.613425 | 4_1:+82294017 | Msa0577920:three_prime_UTR |
| GTCATGTATAATTTATGACA+TGG | 0.615943 | 4_1:+82294199 | Msa0577920:three_prime_UTR |
| CAATAGTGTGCTGCTTGTAG+GGG | 0.617598 | 4_1:+82293795 | Msa0577920:CDS |
| TGTACGATTTATGTATACGT+GGG | 0.620327 | 4_1:+82294018 | Msa0577920:three_prime_UTR |
| GGTCACACTCAAATATCTCA+AGG | 0.625085 | 4_1:-82291803 | None:intergenic |
| GTACTAGATTCCAAGCAAGC+CGG | 0.626519 | 4_1:-82293670 | None:intergenic |
| AATAGTGTGCTGCTTGTAGG+GGG | 0.627038 | 4_1:+82293796 | Msa0577920:CDS |
| AGAAGATGCTGGTTTGAATG+TGG | 0.629014 | 4_1:+82292940 | Msa0577920:CDS |
| TTCATTTGTCACAATCTCCG+AGG | 0.636784 | 4_1:-82290588 | None:intergenic |
| TGAGCACAATCAACTGCAGG+TGG | 0.636879 | 4_1:+82291909 | Msa0577920:CDS |
| TGTCATCAATTGCAGAACCT+CGG | 0.647597 | 4_1:+82290571 | Msa0577920:intron |
| GATGCTAAGAAACTTCTACA+TGG | 0.648028 | 4_1:+82291849 | Msa0577920:CDS |
| TCACACTCAAATATCTCAAG+GGG | 0.652492 | 4_1:-82291801 | None:intergenic |
| GCTAACTTGGAAATTGTGGG+AGG | 0.653551 | 4_1:+82292002 | Msa0577920:CDS |
| ACAATGACTACAGAAAACAA+TGG | 0.653588 | 4_1:+82291872 | Msa0577920:CDS |
| AGCCGAAATATTATTGAACA+CGG | 0.666524 | 4_1:-82291824 | None:intergenic |
| AAGTGCGTGTGATATCAAGA+AGG | 0.674822 | 4_1:+82293752 | Msa0577920:CDS |
| TCTGGCTGGCGAATAAGACA+AGG | 0.684761 | 4_1:+82292574 | Msa0577920:CDS |
| AAAACAATGGGATAAGACAG+TGG | 0.709971 | 4_1:+82291885 | Msa0577920:CDS |
| GGTGCAATATGTCTGTCACG+TGG | 0.761442 | 4_1:+82293817 | Msa0577920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTTATAAATTAAA+TGG | + | chr4_1:82291381-82291400 | Msa0577920:intron | 0.0% |
| !!! | TATAATTAGTTATATGTTTT+AGG | + | chr4_1:82291660-82291679 | Msa0577920:intron | 10.0% |
| !!! | TGTAATTTTAAATTTGAATT+TGG | + | chr4_1:82291717-82291736 | Msa0577920:intron | 10.0% |
| !! | AGTAATTAAAATTTAAAAGT+TGG | - | chr4_1:82293291-82293310 | None:intergenic | 10.0% |
| !! | AAATTAAATCAATTAATCAA+TGG | - | chr4_1:82293515-82293534 | None:intergenic | 10.0% |
| !!! | TCATATATTTTGTGAAATTT+AGG | + | chr4_1:82290390-82290409 | Msa0577920:intron | 15.0% |
| !!! | CATATATTTTGTGAAATTTA+GGG | + | chr4_1:82290391-82290410 | Msa0577920:intron | 15.0% |
| !! | GACATTATTATAATTTATCT+TGG | + | chr4_1:82290762-82290781 | Msa0577920:intron | 15.0% |
| !!! | ATTTATATTTTTCCTTAACT+TGG | - | chr4_1:82291018-82291037 | None:intergenic | 15.0% |
| !!! | ATTAGAAACAATATTTTAAC+TGG | + | chr4_1:82291520-82291539 | Msa0577920:intron | 15.0% |
| !!! | AACATTTTACTGTTATATAA+AGG | + | chr4_1:82292035-82292054 | Msa0577920:CDS | 15.0% |
| !!! | AATTTTTTTCTTTTCATCTT+TGG | + | chr4_1:82292477-82292496 | Msa0577920:intron | 15.0% |
| !! | ACAACCAAATATAAATAAAA+AGG | - | chr4_1:82292814-82292833 | None:intergenic | 15.0% |
| !!! | AAATTTAAAAGTTGGTTTAT+TGG | - | chr4_1:82293283-82293302 | None:intergenic | 15.0% |
| !! | AAGTAAAATGAAATTGAAGA+AGG | - | chr4_1:82290364-82290383 | None:intergenic | 20.0% |
| !! | TTGATTGTAAAACTGTTATA+TGG | - | chr4_1:82290499-82290518 | None:intergenic | 20.0% |
| !!! | GAAGTTTTTAATGATGATTT+TGG | + | chr4_1:82290616-82290635 | Msa0577920:CDS | 20.0% |
| !!! | TTTTTAATGATGATTTTGGA+TGG | + | chr4_1:82290620-82290639 | Msa0577920:CDS | 20.0% |
| !! | CATTTCAAGAATGATATTAA+AGG | - | chr4_1:82291316-82291335 | None:intergenic | 20.0% |
| !!! | AAATGGAAGATATTTTTTGT+TGG | + | chr4_1:82291398-82291417 | Msa0577920:intron | 20.0% |
| !!! | AATATTGTTTCTAATCATCT+TGG | - | chr4_1:82291515-82291534 | None:intergenic | 20.0% |
| !!! | CTTTTTTGAATAAACATGTT+TGG | - | chr4_1:82291583-82291602 | None:intergenic | 20.0% |
| !! | GGAGTTTAAATTTAATTCTT+TGG | + | chr4_1:82291681-82291700 | Msa0577920:intron | 20.0% |
| !!! | ATTTAAAATTACATGCTTGA+AGG | - | chr4_1:82291710-82291729 | None:intergenic | 20.0% |
| !! | TTCTTGATCAATATATTTCT+AGG | - | chr4_1:82292251-82292270 | None:intergenic | 20.0% |
| !!! | TTTTTCCGTGAATTTTTTAT+GGG | + | chr4_1:82292619-82292638 | Msa0577920:intron | 20.0% |
| !! | ATATTCCCATAAAAAATTCA+CGG | - | chr4_1:82292627-82292646 | None:intergenic | 20.0% |
| !!! | TTTTTCTATCCTCATAAAAA+TGG | + | chr4_1:82292666-82292685 | Msa0577920:intron | 20.0% |
| !!! | GCTTCCTTTTTATTTATATT+TGG | + | chr4_1:82292807-82292826 | Msa0577920:intron | 20.0% |
| !!! | TCAACATTTAATGTATTTTC+TGG | + | chr4_1:82293124-82293143 | Msa0577920:intron | 20.0% |
| !! | TGCCTTGTAAATTATAATTA+CGG | + | chr4_1:82293175-82293194 | Msa0577920:intron | 20.0% |
| !! | TCAAAATAAAATGCTAAAGA+TGG | + | chr4_1:82293230-82293249 | Msa0577920:intron | 20.0% |
| !! | TTAAGTTAAATGAAAGAATG+CGG | - | chr4_1:82293399-82293418 | None:intergenic | 20.0% |
| !! | AGTTCACTAAAAATATTGTT+TGG | + | chr4_1:82294123-82294142 | Msa0577920:three_prime_UTR | 20.0% |
| ! | AAATTGAAGAAGGAAGAAAT+AGG | - | chr4_1:82290354-82290373 | None:intergenic | 25.0% |
| ! | ATCTAAATGAGAATGCTAAA+TGG | + | chr4_1:82290645-82290664 | Msa0577920:CDS | 25.0% |
| ! | TCTAAATGAGAATGCTAAAT+GGG | + | chr4_1:82290646-82290665 | Msa0577920:CDS | 25.0% |
| ! | ATCATATAACAATTCAAGCT+TGG | - | chr4_1:82290843-82290862 | None:intergenic | 25.0% |
| !! | AATCTATTTTGTCCAAGTTA+AGG | + | chr4_1:82291003-82291022 | Msa0577920:intron | 25.0% |
| ! | AAAATTTGAATGAACTATGC+TGG | + | chr4_1:82291287-82291306 | Msa0577920:intron | 25.0% |
| !!! | TAAGAAAAATTGACTTGTGT+AGG | - | chr4_1:82291642-82291661 | None:intergenic | 25.0% |
| ! | AGAAATTAGAGATTAGAACT+TGG | + | chr4_1:82292267-82292286 | Msa0577920:intron | 25.0% |
| ! | TGATAATAGTGATATACTAG+TGG | - | chr4_1:82292322-82292341 | None:intergenic | 25.0% |
| ! | TGTGCAAATATTTGAGAATA+TGG | - | chr4_1:82292352-82292371 | None:intergenic | 25.0% |
| !! | TTCTCATTCTGTACATATTT+TGG | + | chr4_1:82292388-82292407 | Msa0577920:intron | 25.0% |
| !! | GTTTTTCCGTGAATTTTTTA+TGG | + | chr4_1:82292618-82292637 | Msa0577920:intron | 25.0% |
| ! | TTCAGTCAATTTAATGCAAA+AGG | + | chr4_1:82293075-82293094 | Msa0577920:CDS | 25.0% |
| ! | GCCTTGTAAATTATAATTAC+GGG | + | chr4_1:82293176-82293195 | Msa0577920:intron | 25.0% |
| ! | TCCCGTAATTATAATTTACA+AGG | - | chr4_1:82293180-82293199 | None:intergenic | 25.0% |
| ! | CTCAATGAAAAATTTCCATA+GGG | - | chr4_1:82293449-82293468 | None:intergenic | 25.0% |
| ! | ACTCAATGAAAAATTTCCAT+AGG | - | chr4_1:82293450-82293469 | None:intergenic | 25.0% |
| !! | GGATTGTTTGTTAGTTATAT+CGG | - | chr4_1:82293636-82293655 | None:intergenic | 25.0% |
| ! | AATATTGTTTGGTTGAAACT+TGG | + | chr4_1:82294134-82294153 | Msa0577920:three_prime_UTR | 25.0% |
| ! | GTCATGTATAATTTATGACA+TGG | + | chr4_1:82294199-82294218 | Msa0577920:three_prime_UTR | 25.0% |
| GTAAAGATGATGAACATCTA+TGG | + | chr4_1:82290159-82290178 | Msa0577920:exon | 30.0% | |
| TGGGTTTAAATTGGTAGAAT+CGG | - | chr4_1:82290319-82290338 | None:intergenic | 30.0% | |
| ACAATAGTTTCACTGGAATA+TGG | + | chr4_1:82290417-82290436 | Msa0577920:intron | 30.0% | |
| GAGAATTAGGACTTTACTTT+AGG | + | chr4_1:82290439-82290458 | Msa0577920:intron | 30.0% | |
| ! | TAGGACTTTACTTTAGGAAT+AGG | + | chr4_1:82290445-82290464 | Msa0577920:intron | 30.0% |
| ATGGACATGAATGATATACA+AGG | - | chr4_1:82290480-82290499 | None:intergenic | 30.0% | |
| AGGATAAAATCAGTAACCTT+AGG | - | chr4_1:82290728-82290747 | None:intergenic | 30.0% | |
| !!! | TACTGATTTTATCCTTCAAC+TGG | + | chr4_1:82290733-82290752 | Msa0577920:intron | 30.0% |
| !! | ACTGATTTTATCCTTCAACT+GGG | + | chr4_1:82290734-82290753 | Msa0577920:intron | 30.0% |
| TAATTTATCTTGGCTACTCT+TGG | + | chr4_1:82290772-82290791 | Msa0577920:intron | 30.0% | |
| ATAACAATTCAAGCTTGGTA+TGG | - | chr4_1:82290838-82290857 | None:intergenic | 30.0% | |
| TTAGAAAAAGGGAAAACATG+GGG | - | chr4_1:82290877-82290896 | None:intergenic | 30.0% | |
| GTTAGAAAAAGGGAAAACAT+GGG | - | chr4_1:82290878-82290897 | None:intergenic | 30.0% | |
| AGTTAGAAAAAGGGAAAACA+TGG | - | chr4_1:82290879-82290898 | None:intergenic | 30.0% | |
| CATTGTGCAAGTTAGAAAAA+GGG | - | chr4_1:82290888-82290907 | None:intergenic | 30.0% | |
| ACATTGTGCAAGTTAGAAAA+AGG | - | chr4_1:82290889-82290908 | None:intergenic | 30.0% | |
| ACCTCCTAAAATACAAGTTT+AGG | + | chr4_1:82291238-82291257 | Msa0577920:intron | 30.0% | |
| CCTCCTAAAATACAAGTTTA+GGG | + | chr4_1:82291239-82291258 | Msa0577920:intron | 30.0% | |
| ! | TGTCCCTAAACTTGTATTTT+AGG | - | chr4_1:82291245-82291264 | None:intergenic | 30.0% |
| AAATACAAGTTTAGGGACAA+AGG | + | chr4_1:82291246-82291265 | Msa0577920:intron | 30.0% | |
| !!! | TGGAAGATATTTTTTGTTGG+TGG | + | chr4_1:82291401-82291420 | Msa0577920:intron | 30.0% |
| !!! | TATTTTTTGTTGGTGGTGTA+AGG | + | chr4_1:82291408-82291427 | Msa0577920:intron | 30.0% |
| !!! | ATTTTTTGTTGGTGGTGTAA+GGG | + | chr4_1:82291409-82291428 | Msa0577920:intron | 30.0% |
| !!! | ATTTTATTGTTGTTTCTCCC+TGG | + | chr4_1:82291764-82291783 | Msa0577920:intron | 30.0% |
| GACCGTGTTCAATAATATTT+CGG | + | chr4_1:82291822-82291841 | Msa0577920:CDS | 30.0% | |
| AGCCGAAATATTATTGAACA+CGG | - | chr4_1:82291827-82291846 | None:intergenic | 30.0% | |
| ACAATGACTACAGAAAACAA+TGG | + | chr4_1:82291872-82291891 | Msa0577920:CDS | 30.0% | |
| CAATGACTACAGAAAACAAT+GGG | + | chr4_1:82291873-82291892 | Msa0577920:CDS | 30.0% | |
| ATTCTCTAGGTTTCAAAAGA+GGG | - | chr4_1:82291978-82291997 | None:intergenic | 30.0% | |
| TATTCTCTAGGTTTCAAAAG+AGG | - | chr4_1:82291979-82291998 | None:intergenic | 30.0% | |
| AAAGGTAATACATCCGATTA+TGG | + | chr4_1:82292053-82292072 | Msa0577920:intron | 30.0% | |
| AAGGTAATACATCCGATTAT+GGG | + | chr4_1:82292054-82292073 | Msa0577920:intron | 30.0% | |
| ACATGTGCATTAACACTAAA+AGG | - | chr4_1:82292112-82292131 | None:intergenic | 30.0% | |
| TTCTCATATGGATGTTGTTA+TGG | + | chr4_1:82292157-82292176 | Msa0577920:intron | 30.0% | |
| TCTCATATGGATGTTGTTAT+GGG | + | chr4_1:82292158-82292177 | Msa0577920:intron | 30.0% | |
| AATTCTTCTTGTTCAATGAC+AGG | - | chr4_1:82292226-82292245 | None:intergenic | 30.0% | |
| ATATTTGAGAATATGGTGAC+TGG | - | chr4_1:82292345-82292364 | None:intergenic | 30.0% | |
| TCATTGCTTGAAAAAAAGGT+AGG | - | chr4_1:82292447-82292466 | None:intergenic | 30.0% | |
| GCAATCATTGCTTGAAAAAA+AGG | - | chr4_1:82292451-82292470 | None:intergenic | 30.0% | |
| TTAGGAATGTGAACATACTT+TGG | + | chr4_1:82292510-82292529 | Msa0577920:intron | 30.0% | |
| !! | AGATCTTCACCATTTTTATG+AGG | - | chr4_1:82292678-82292697 | None:intergenic | 30.0% |
| ! | TGTATTTCCGTGCATTTTTA+TGG | + | chr4_1:82292766-82292785 | Msa0577920:intron | 30.0% |
| TTAACCTCCATAAAAATGCA+CGG | - | chr4_1:82292776-82292795 | None:intergenic | 30.0% | |
| TTTATTGGTAAACGACGTAA+CGG | - | chr4_1:82293268-82293287 | None:intergenic | 30.0% | |
| AAAATAAATAGCCTACCCTA+TGG | + | chr4_1:82293431-82293450 | Msa0577920:intron | 30.0% | |
| ATGAAAAATTTCCATAGGGT+AGG | - | chr4_1:82293445-82293464 | None:intergenic | 30.0% | |
| ! | TCTTTTGTGTGTATCATTCT+TGG | + | chr4_1:82293541-82293560 | Msa0577920:intron | 30.0% |
| TTAAGCTACATATCGCAATT+AGG | - | chr4_1:82293605-82293624 | None:intergenic | 30.0% | |
| GTTTGATCATGAATGATAGT+AGG | - | chr4_1:82293718-82293737 | None:intergenic | 30.0% | |
| TTGTACGATTTATGTATACG+TGG | + | chr4_1:82294017-82294036 | Msa0577920:three_prime_UTR | 30.0% | |
| TGTACGATTTATGTATACGT+GGG | + | chr4_1:82294018-82294037 | Msa0577920:three_prime_UTR | 30.0% | |
| !! | ATGAAGGAGTATCACAAGAT+AGG | + | chr4_1:82290067-82290086 | Msa0577920:five_prime_UTR | 35.0% |
| AGTATCACAAGATAGGTTTG+TGG | + | chr4_1:82290074-82290093 | Msa0577920:five_prime_UTR | 35.0% | |
| TAAAAGAGAGATTCGTTGTG+TGG | + | chr4_1:82290125-82290144 | Msa0577920:five_prime_UTR | 35.0% | |
| ! | GGATGTTGTTGTTGTTGAAT+CGG | - | chr4_1:82290286-82290305 | None:intergenic | 35.0% |
| CTACCAATTTAAACCCATCT+AGG | + | chr4_1:82290322-82290341 | Msa0577920:CDS | 35.0% | |
| ! | GTACCTAGATGGGTTTAAAT+TGG | - | chr4_1:82290328-82290347 | None:intergenic | 35.0% |
| AAATAGGTACGTACCTAGAT+GGG | - | chr4_1:82290338-82290357 | None:intergenic | 35.0% | |
| TCACTGGAATATGGAGAATT+AGG | + | chr4_1:82290426-82290445 | Msa0577920:intron | 35.0% | |
| ! | GACTTTACTTTAGGAATAGG+AGG | + | chr4_1:82290448-82290467 | Msa0577920:intron | 35.0% |
| ! | CTGATTTTATCCTTCAACTG+GGG | + | chr4_1:82290735-82290754 | Msa0577920:intron | 35.0% |
| !! | CCCTAAACTTGTATTTTAGG+AGG | - | chr4_1:82291242-82291261 | None:intergenic | 35.0% |
| AACAATAGCTCAACACCTAA+AGG | - | chr4_1:82291441-82291460 | None:intergenic | 35.0% | |
| !!! | CAATATTTTAACTGGACACC+CGG | + | chr4_1:82291528-82291547 | Msa0577920:intron | 35.0% |
| ATGTGTCAAACACTCTTAAC+CGG | - | chr4_1:82291550-82291569 | None:intergenic | 35.0% | |
| ACAATCAACCTATCAAGCAT+GGG | - | chr4_1:82291613-82291632 | None:intergenic | 35.0% | |
| TCACACTCAAATATCTCAAG+GGG | - | chr4_1:82291804-82291823 | None:intergenic | 35.0% | |
| GTCACACTCAAATATCTCAA+GGG | - | chr4_1:82291805-82291824 | None:intergenic | 35.0% | |
| GATGCTAAGAAACTTCTACA+TGG | + | chr4_1:82291849-82291868 | Msa0577920:CDS | 35.0% | |
| AAAACAATGGGATAAGACAG+TGG | + | chr4_1:82291885-82291904 | Msa0577920:CDS | 35.0% | |
| !! | AAATCTGATGGTTCTGAAGT+TGG | + | chr4_1:82291934-82291953 | Msa0577920:CDS | 35.0% |
| AGGTAATACATCCGATTATG+GGG | + | chr4_1:82292055-82292074 | Msa0577920:intron | 35.0% | |
| TATCAATGCAACCCCATAAT+CGG | - | chr4_1:82292069-82292088 | None:intergenic | 35.0% | |
| TACAGAATGAGAAGTCAGAA+CGG | - | chr4_1:82292381-82292400 | None:intergenic | 35.0% | |
| ATCTTTGGTGAAACCTTGTT+AGG | + | chr4_1:82292492-82292511 | Msa0577920:intron | 35.0% | |
| GTATGTTCACATTCCTAACA+AGG | - | chr4_1:82292508-82292527 | None:intergenic | 35.0% | |
| CACGGCAGAATAAATATGTA+CGG | + | chr4_1:82292536-82292555 | Msa0577920:CDS | 35.0% | |
| ACGGCAGAATAAATATGTAC+GGG | + | chr4_1:82292537-82292556 | Msa0577920:CDS | 35.0% | |
| ! | ATTTCCGTGCATTTTTATGG+AGG | + | chr4_1:82292769-82292788 | Msa0577920:intron | 35.0% |
| TCACAAAACAGTCATGTCAT+AGG | - | chr4_1:82292864-82292883 | None:intergenic | 35.0% | |
| ATGAAACATTGTGATCTCAC+AGG | - | chr4_1:82292918-82292937 | None:intergenic | 35.0% | |
| ATGTTTCATCAAGAAGATGC+TGG | + | chr4_1:82292929-82292948 | Msa0577920:CDS | 35.0% | |
| ! | AATTTACAAGGCATCAGCAT+GGG | - | chr4_1:82293168-82293187 | None:intergenic | 35.0% |
| ! | TAATTTACAAGGCATCAGCA+TGG | - | chr4_1:82293169-82293188 | None:intergenic | 35.0% |
| GCACTTGAAATGAAAGAGAT+CGG | - | chr4_1:82293369-82293388 | None:intergenic | 35.0% | |
| ACAAACAATCCCTTGTGTAT+AGG | + | chr4_1:82293645-82293664 | Msa0577920:intron | 35.0% | |
| ! | ACTATTGGCTAACAACTTCT+TGG | - | chr4_1:82293782-82293801 | None:intergenic | 35.0% |
| !!! | TCACTCAGCTTTGTTTTGTT+TGG | - | chr4_1:82293918-82293937 | None:intergenic | 35.0% |
| CTCAACGTGACTCAAAAATT+TGG | + | chr4_1:82294084-82294103 | Msa0577920:three_prime_UTR | 35.0% | |
| GATGAACATCTATGGCAGTT+CGG | + | chr4_1:82290167-82290186 | Msa0577920:CDS | 40.0% | |
| ATGAACATCTATGGCAGTTC+GGG | + | chr4_1:82290168-82290187 | Msa0577920:CDS | 40.0% | |
| GAAATAGGTACGTACCTAGA+TGG | - | chr4_1:82290339-82290358 | None:intergenic | 40.0% | |
| AGGGCTTACAATAGTTTCAC+TGG | + | chr4_1:82290410-82290429 | Msa0577920:intron | 40.0% | |
| TGTCATCAATTGCAGAACCT+CGG | + | chr4_1:82290571-82290590 | Msa0577920:intron | 40.0% | |
| TTCATTTGTCACAATCTCCG+AGG | - | chr4_1:82290591-82290610 | None:intergenic | 40.0% | |
| AACCTTAGGTTTGCAGGATT+TGG | - | chr4_1:82290714-82290733 | None:intergenic | 40.0% | |
| ATCAGTAACCTTAGGTTTGC+AGG | - | chr4_1:82290720-82290739 | None:intergenic | 40.0% | |
| AATGTCTATACCCCAGTTGA+AGG | - | chr4_1:82290748-82290767 | None:intergenic | 40.0% | |
| ! | TTCTAACTTGCACAATGTGC+TGG | + | chr4_1:82290891-82290910 | Msa0577920:intron | 40.0% |
| ! | TCTAACTTGCACAATGTGCT+GGG | + | chr4_1:82290892-82290911 | Msa0577920:intron | 40.0% |
| CTGCATTTATGTCAGTGACT+AGG | - | chr4_1:82290921-82290940 | None:intergenic | 40.0% | |
| TCAACTAAATGCTGCTCAGA+TGG | - | chr4_1:82291144-82291163 | None:intergenic | 40.0% | |
| TAGGGACAAAGGATGAATAG+AGG | + | chr4_1:82291257-82291276 | Msa0577920:intron | 40.0% | |
| !! | TAGGTGTTGAGCTATTGTTG+AGG | + | chr4_1:82291442-82291461 | Msa0577920:intron | 40.0% |
| GTTTGTGTCTCAGCTGTATT+TGG | + | chr4_1:82291482-82291501 | Msa0577920:intron | 40.0% | |
| TGTGTCAAACACTCTTAACC+GGG | - | chr4_1:82291549-82291568 | None:intergenic | 40.0% | |
| GACAATCAACCTATCAAGCA+TGG | - | chr4_1:82291614-82291633 | None:intergenic | 40.0% | |
| GGTCACACTCAAATATCTCA+AGG | - | chr4_1:82291806-82291825 | None:intergenic | 40.0% | |
| CAAGTTAGCACGTATTCTCT+AGG | - | chr4_1:82291991-82292010 | None:intergenic | 40.0% | |
| CTAGAGAATACGTGCTAACT+TGG | + | chr4_1:82291989-82292008 | Msa0577920:CDS | 40.0% | |
| ACGTGCTAACTTGGAAATTG+TGG | + | chr4_1:82291998-82292017 | Msa0577920:CDS | 40.0% | |
| CGTGCTAACTTGGAAATTGT+GGG | + | chr4_1:82291999-82292018 | Msa0577920:CDS | 40.0% | |
| CTAACTTGGAAATTGTGGGA+GGG | + | chr4_1:82292003-82292022 | Msa0577920:CDS | 40.0% | |
| TAACTTGGAAATTGTGGGAG+GGG | + | chr4_1:82292004-82292023 | Msa0577920:CDS | 40.0% | |
| ! | ATGACAGGACAAAAAGTGCA+GGG | - | chr4_1:82292211-82292230 | None:intergenic | 40.0% |
| ! | AATGACAGGACAAAAAGTGC+AGG | - | chr4_1:82292212-82292231 | None:intergenic | 40.0% |
| CGTACATATTTATTCTGCCG+TGG | - | chr4_1:82292538-82292557 | None:intergenic | 40.0% | |
| !! | TTGAGTTTTTCAGATCTGGC+TGG | + | chr4_1:82292560-82292579 | Msa0577920:CDS | 40.0% |
| ! | TGACATGACTGTTTTGTGAC+TGG | + | chr4_1:82292865-82292884 | Msa0577920:intron | 40.0% |
| CTGGCGATTATTATAGTACC+TGG | + | chr4_1:82292884-82292903 | Msa0577920:intron | 40.0% | |
| !! | AGAAGATGCTGGTTTGAATG+TGG | + | chr4_1:82292940-82292959 | Msa0577920:CDS | 40.0% |
| ! | GCAAAACTGGCATTTTCCAA+AGG | + | chr4_1:82292968-82292987 | Msa0577920:CDS | 40.0% |
| !! | TGGCATTTTCCAAAGGCATA+TGG | + | chr4_1:82292975-82292994 | Msa0577920:CDS | 40.0% |
| TACAAAGCTCCATATGCCTT+TGG | - | chr4_1:82292987-82293006 | None:intergenic | 40.0% | |
| ! | ATGGAGCTTTGTATGCAAGA+TGG | + | chr4_1:82292994-82293013 | Msa0577920:CDS | 40.0% |
| GACTGAACTGTTAACTGAAC+TGG | - | chr4_1:82293062-82293081 | None:intergenic | 40.0% | |
| ATCAGCATGGGAAAATTGGA+AGG | - | chr4_1:82293156-82293175 | None:intergenic | 40.0% | |
| GCATGATGTATAACGTAGAC+AGG | - | chr4_1:82293315-82293334 | None:intergenic | 40.0% | |
| TTTCCTGCAACTGTGTTCTT+TGG | + | chr4_1:82293482-82293501 | Msa0577920:intron | 40.0% | |
| TTCCTGCAACTGTGTTCTTT+GGG | + | chr4_1:82293483-82293502 | Msa0577920:intron | 40.0% | |
| AATCCCTTGTGTATAGGTAC+CGG | + | chr4_1:82293651-82293670 | Msa0577920:intron | 40.0% | |
| AAGTGCGTGTGATATCAAGA+AGG | + | chr4_1:82293752-82293771 | Msa0577920:CDS | 40.0% | |
| TTGGCTAACAACTTCTTGGA+TGG | - | chr4_1:82293778-82293797 | None:intergenic | 40.0% | |
| CTAGGTGCTAAAGTTGCAAT+GGG | + | chr4_1:82293850-82293869 | Msa0577920:CDS | 40.0% | |
| !!! | ATTTTTGAGTCACGTTGAGC+TGG | - | chr4_1:82294083-82294102 | None:intergenic | 40.0% |
| AAGAGAGATTCGTTGTGTGG+AGG | + | chr4_1:82290128-82290147 | Msa0577920:five_prime_UTR | 45.0% | |
| AGAGAGATTCGTTGTGTGGA+GGG | + | chr4_1:82290129-82290148 | Msa0577920:five_prime_UTR | 45.0% | |
| TGCCAAATCCTGCAAACCTA+AGG | + | chr4_1:82290709-82290728 | Msa0577920:CDS | 45.0% | |
| TAGTGAACAAAGTGTGCCAG+AGG | - | chr4_1:82290955-82290974 | None:intergenic | 45.0% | |
| CTGAGCAGCATTTAGTTGAG+AGG | + | chr4_1:82291145-82291164 | Msa0577920:intron | 45.0% | |
| GTGTAAGGGTTGTGTCCTTT+AGG | + | chr4_1:82291423-82291442 | Msa0577920:intron | 45.0% | |
| !! | TCTCAGCTGTATTTGGTGCA+TGG | + | chr4_1:82291489-82291508 | Msa0577920:intron | 45.0% |
| GCTAACTTGGAAATTGTGGG+AGG | + | chr4_1:82292002-82292021 | Msa0577920:CDS | 45.0% | |
| TTCGCGACTGCTTTCTCATA+TGG | + | chr4_1:82292145-82292164 | Msa0577920:intron | 45.0% | |
| ! | TGACAGGACAAAAAGTGCAG+GGG | - | chr4_1:82292210-82292229 | None:intergenic | 45.0% |
| ! | GTGAACATACTTTGGCTCCA+CGG | + | chr4_1:82292518-82292537 | Msa0577920:CDS | 45.0% |
| !! | CGGGTTGAGTTTTTCAGATC+TGG | + | chr4_1:82292556-82292575 | Msa0577920:CDS | 45.0% |
| ATCTCACAGGCATTTCTACC+AGG | - | chr4_1:82292905-82292924 | None:intergenic | 45.0% | |
| !! | TGCTGGTTTGAATGTGGAGA+TGG | + | chr4_1:82292946-82292965 | Msa0577920:CDS | 45.0% |
| GAATGTGGAGATGGCAAAAC+TGG | + | chr4_1:82292955-82292974 | Msa0577920:CDS | 45.0% | |
| AGGCATCAGCATGGGAAAAT+TGG | - | chr4_1:82293160-82293179 | None:intergenic | 45.0% | |
| !! | AATTACGGGAGTGTTGCTTG+AGG | + | chr4_1:82293190-82293209 | Msa0577920:intron | 45.0% |
| TTCCCAAAGAACACAGTTGC+AGG | - | chr4_1:82293488-82293507 | None:intergenic | 45.0% | |
| GCTACATATCGCAATTAGGC+TGG | - | chr4_1:82293601-82293620 | None:intergenic | 45.0% | |
| AAGCCGGTACCTATACACAA+GGG | - | chr4_1:82293657-82293676 | None:intergenic | 45.0% | |
| GTACTAGATTCCAAGCAAGC+CGG | - | chr4_1:82293673-82293692 | None:intergenic | 45.0% | |
| !! | CCAATAGTGTGCTGCTTGTA+GGG | + | chr4_1:82293794-82293813 | Msa0577920:CDS | 45.0% |
| !! | CAATAGTGTGCTGCTTGTAG+GGG | + | chr4_1:82293795-82293814 | Msa0577920:CDS | 45.0% |
| !! | AATAGTGTGCTGCTTGTAGG+GGG | + | chr4_1:82293796-82293815 | Msa0577920:CDS | 45.0% |
| CCATTGCAACTTTAGCACCT+AGG | - | chr4_1:82293852-82293871 | None:intergenic | 45.0% | |
| CCTAGGTGCTAAAGTTGCAA+TGG | + | chr4_1:82293849-82293868 | Msa0577920:CDS | 45.0% | |
| GAGAGATTCGTTGTGTGGAG+GGG | + | chr4_1:82290130-82290149 | Msa0577920:five_prime_UTR | 50.0% | |
| GGTAGAATCGGAGACGAAAG+AGG | - | chr4_1:82290307-82290326 | None:intergenic | 50.0% | |
| AACTTGCACAATGTGCTGGG+AGG | + | chr4_1:82290895-82290914 | Msa0577920:intron | 50.0% | |
| TGCAGAGTCAAACCATCCTC+TGG | + | chr4_1:82290936-82290955 | Msa0577920:intron | 50.0% | |
| GAACAAAGTGTGCCAGAGGA+TGG | - | chr4_1:82290951-82290970 | None:intergenic | 50.0% | |
| GTTGAGGCTGTGTGTCTAAG+AGG | + | chr4_1:82291458-82291477 | Msa0577920:intron | 50.0% | |
| !! | GAGAAGTGCCCATGCTTGAT+AGG | + | chr4_1:82291602-82291621 | Msa0577920:intron | 50.0% |
| TCTCCCTGGATGTTGCAGAA+TGG | + | chr4_1:82291778-82291797 | Msa0577920:intron | 50.0% | |
| GGTTGAGCACAATCAACTGC+AGG | + | chr4_1:82291906-82291925 | Msa0577920:CDS | 50.0% | |
| TGAGCACAATCAACTGCAGG+TGG | + | chr4_1:82291909-82291928 | Msa0577920:CDS | 50.0% | |
| CTGCAGGTGGACAAATCTGA+TGG | + | chr4_1:82291922-82291941 | Msa0577920:CDS | 50.0% | |
| TTGGAAATTGTGGGAGGGGA+AGG | + | chr4_1:82292008-82292027 | Msa0577920:CDS | 50.0% | |
| AAAGCAGTCGCGAACACATG+AGG | - | chr4_1:82292139-82292158 | None:intergenic | 50.0% | |
| AGTGCAGGGGAAGAGAAAGA+GGG | - | chr4_1:82292197-82292216 | None:intergenic | 50.0% | |
| AAGTGCAGGGGAAGAGAAAG+AGG | - | chr4_1:82292198-82292217 | None:intergenic | 50.0% | |
| TCTGGCTGGCGAATAAGACA+AGG | + | chr4_1:82292574-82292593 | Msa0577920:CDS | 50.0% | |
| GAAGATACTCTGCTGCAAGC+TGG | + | chr4_1:82293029-82293048 | Msa0577920:CDS | 50.0% | |
| CAAGCCGGTACCTATACACA+AGG | - | chr4_1:82293658-82293677 | None:intergenic | 50.0% | |
| !! | TGTATAGGTACCGGCTTGCT+TGG | + | chr4_1:82293660-82293679 | Msa0577920:intron | 50.0% |
| !! | GCCAATAGTGTGCTGCTTGT+AGG | + | chr4_1:82293793-82293812 | Msa0577920:CDS | 50.0% |
| CCCTACAAGCAGCACACTAT+TGG | - | chr4_1:82293797-82293816 | None:intergenic | 50.0% | |
| GGTGCAATATGTCTGTCACG+TGG | + | chr4_1:82293817-82293836 | Msa0577920:CDS | 50.0% | |
| AGATTCGTTGTGTGGAGGGG+AGG | + | chr4_1:82290133-82290152 | Msa0577920:five_prime_UTR | 55.0% | |
| GGGCCATTCTGCAACATCCA+GGG | - | chr4_1:82291784-82291803 | None:intergenic | 55.0% | |
| AGAGAAAGAGGGCGGGGATA+TGG | - | chr4_1:82292186-82292205 | None:intergenic | 55.0% | |
| TCACGTGGTCACTCTAGCCT+AGG | + | chr4_1:82293832-82293851 | Msa0577920:CDS | 55.0% | |
| GGGGCCATTCTGCAACATCC+AGG | - | chr4_1:82291785-82291804 | None:intergenic | 60.0% | |
| AGGGGAAGAGAAAGAGGGCG+GGG | - | chr4_1:82292192-82292211 | None:intergenic | 60.0% | |
| CAGGGGAAGAGAAAGAGGGC+GGG | - | chr4_1:82292193-82292212 | None:intergenic | 60.0% | |
| GCAGGGGAAGAGAAAGAGGG+CGG | - | chr4_1:82292194-82292213 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 82290062 | 82294238 | 82290062 | ID=Msa0577920;Name=Msa0577920 |
| chr4_1 | mRNA | 82290062 | 82294238 | 82290062 | ID=Msa0577920-mRNA-1;Parent=Msa0577920;Name=Msa0577920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=103|1|1|1|1|1|6|305|376 |
| chr4_1 | exon | 82290062 | 82290343 | 82290062 | ID=Msa0577920-mRNA-1:exon:29748;Parent=Msa0577920-mRNA-1 |
| chr4_1 | exon | 82290586 | 82290730 | 82290586 | ID=Msa0577920-mRNA-1:exon:29749;Parent=Msa0577920-mRNA-1 |
| chr4_1 | exon | 82291796 | 82292056 | 82291796 | ID=Msa0577920-mRNA-1:exon:29750;Parent=Msa0577920-mRNA-1 |
| chr4_1 | exon | 82292514 | 82292595 | 82292514 | ID=Msa0577920-mRNA-1:exon:29751;Parent=Msa0577920-mRNA-1 |
| chr4_1 | exon | 82292900 | 82293096 | 82292900 | ID=Msa0577920-mRNA-1:exon:29752;Parent=Msa0577920-mRNA-1 |
| chr4_1 | exon | 82293667 | 82294238 | 82293667 | ID=Msa0577920-mRNA-1:exon:29753;Parent=Msa0577920-mRNA-1 |
| chr4_1 | five_prime_UTR | 82290062 | 82290164 | 82290062 | ID=Msa0577920-mRNA-1:five_prime_utr;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82290165 | 82290343 | 82290165 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82290586 | 82290730 | 82290586 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82291796 | 82292056 | 82291796 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82292514 | 82292595 | 82292514 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82292900 | 82293096 | 82292900 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | CDS | 82293667 | 82293933 | 82293667 | ID=Msa0577920-mRNA-1:cds;Parent=Msa0577920-mRNA-1 |
| chr4_1 | three_prime_UTR | 82293934 | 82294238 | 82293934 | ID=Msa0577920-mRNA-1:three_prime_utr;Parent=Msa0577920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
