Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022110 | XP_013448863.1 | 75.926 | 108 | 4 | 1 | 1 | 86 | 1 | 108 | 4.92e-33 | 138 |
| Msa1022110 | XP_013448863.1 | 98.790 | 248 | 3 | 0 | 89 | 336 | 213 | 460 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022110 | sp|Q9SR33|ORP3B_ARATH | 78.367 | 245 | 52 | 1 | 89 | 333 | 213 | 456 | 7.99e-145 | 419 |
| Msa1022110 | sp|Q9SR33|ORP3B_ARATH | 54.545 | 110 | 24 | 3 | 1 | 86 | 1 | 108 | 1.88e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022110 | A0A072UAQ5 | 75.926 | 108 | 4 | 1 | 1 | 86 | 1 | 108 | 2.35e-33 | 138 |
| Msa1022110 | A0A072UAQ5 | 98.790 | 248 | 3 | 0 | 89 | 336 | 213 | 460 | 0.0 | 519 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0744540 | Msa1022110 | 0.808569 | 2.903452e-50 | -8.615850e-47 |
| Msa0744550 | Msa1022110 | 0.808340 | 3.249753e-50 | -8.615850e-47 |
| Msa0744560 | Msa1022110 | 0.803922 | 2.766492e-49 | -8.615850e-47 |
| Msa0826380 | Msa1022110 | 0.825674 | 4.121157e-54 | -8.615850e-47 |
| Msa0826450 | Msa1022110 | 0.828995 | 6.593583e-55 | -8.615850e-47 |
| Msa0480530 | Msa1022110 | 0.808293 | 3.325056e-50 | -8.615850e-47 |
| Msa0480550 | Msa1022110 | 0.800759 | 1.239456e-48 | -8.615850e-47 |
| Msa0865810 | Msa1022110 | 0.833256 | 5.919563e-56 | -8.615850e-47 |
| Msa0865830 | Msa1022110 | 0.807779 | 4.277988e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022110 | MtrunA17_Chr7g0238731 | 98.790 | 248 | 3 | 0 | 89 | 336 | 213 | 460 | 0.0 | 519 |
| Msa1022110 | MtrunA17_Chr7g0238731 | 75.926 | 108 | 4 | 1 | 1 | 86 | 1 | 108 | 4.53e-37 | 138 |
| Msa1022110 | MtrunA17_Chr4g0031691 | 77.510 | 249 | 55 | 1 | 89 | 336 | 209 | 457 | 2.27e-144 | 415 |
| Msa1022110 | MtrunA17_Chr4g0031691 | 48.387 | 93 | 24 | 2 | 18 | 86 | 12 | 104 | 3.11e-19 | 88.2 |
| Msa1022110 | MtrunA17_Chr3g0123351 | 30.734 | 218 | 129 | 7 | 97 | 307 | 586 | 788 | 2.37e-17 | 83.2 |
| Msa1022110 | MtrunA17_Chr3g0131011 | 30.542 | 203 | 126 | 6 | 108 | 307 | 545 | 735 | 1.68e-16 | 80.5 |
| Msa1022110 | MtrunA17_Chr3g0115081 | 29.464 | 224 | 141 | 7 | 97 | 315 | 554 | 765 | 2.76e-16 | 80.1 |
| Msa1022110 | MtrunA17_Chr4g0056441 | 29.279 | 222 | 142 | 5 | 97 | 315 | 542 | 751 | 4.03e-16 | 79.3 |
| Msa1022110 | MtrunA17_Chr5g0424281 | 28.319 | 226 | 141 | 8 | 97 | 315 | 548 | 759 | 2.86e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022110 | AT3G09300.1 | 78.367 | 245 | 52 | 1 | 89 | 333 | 213 | 456 | 8.12e-146 | 419 |
| Msa1022110 | AT3G09300.1 | 54.545 | 110 | 24 | 3 | 1 | 86 | 1 | 108 | 1.91e-24 | 103 |
| Msa1022110 | AT5G02100.1 | 77.733 | 247 | 54 | 1 | 89 | 335 | 208 | 453 | 5.58e-144 | 414 |
| Msa1022110 | AT5G02100.1 | 55.455 | 110 | 18 | 3 | 1 | 86 | 1 | 103 | 9.34e-27 | 110 |
| Msa1022110 | AT5G02100.3 | 77.733 | 247 | 54 | 1 | 89 | 335 | 181 | 426 | 6.53e-144 | 413 |
| Msa1022110 | AT5G02100.3 | 87.179 | 39 | 5 | 0 | 48 | 86 | 38 | 76 | 3.11e-16 | 79.7 |
| Msa1022110 | AT5G59420.1 | 74.308 | 253 | 57 | 2 | 89 | 336 | 208 | 457 | 1.93e-141 | 408 |
| Msa1022110 | AT5G59420.1 | 58.065 | 93 | 15 | 2 | 18 | 86 | 11 | 103 | 7.16e-24 | 102 |
| Msa1022110 | AT5G02100.2 | 84.071 | 113 | 18 | 0 | 89 | 201 | 208 | 320 | 1.13e-66 | 213 |
| Msa1022110 | AT5G02100.2 | 55.455 | 110 | 18 | 3 | 1 | 86 | 1 | 103 | 3.23e-27 | 109 |
| Msa1022110 | AT4G12460.3 | 29.412 | 221 | 138 | 6 | 97 | 315 | 286 | 490 | 2.72e-20 | 92.0 |
| Msa1022110 | AT4G12460.4 | 29.412 | 221 | 138 | 6 | 97 | 315 | 286 | 490 | 2.72e-20 | 92.0 |
| Msa1022110 | AT4G12460.9 | 29.412 | 221 | 138 | 6 | 97 | 315 | 286 | 490 | 2.72e-20 | 92.0 |
| Msa1022110 | AT4G12460.7 | 29.412 | 221 | 138 | 6 | 97 | 315 | 475 | 679 | 3.17e-20 | 92.0 |
| Msa1022110 | AT4G12460.8 | 29.412 | 221 | 138 | 6 | 97 | 315 | 474 | 678 | 3.23e-20 | 92.0 |
| Msa1022110 | AT4G12460.1 | 29.412 | 221 | 138 | 6 | 97 | 315 | 474 | 678 | 3.23e-20 | 92.0 |
| Msa1022110 | AT4G12460.2 | 29.091 | 220 | 138 | 6 | 97 | 315 | 148 | 350 | 6.19e-20 | 89.7 |
| Msa1022110 | AT4G08180.1 | 31.416 | 226 | 134 | 8 | 97 | 315 | 588 | 799 | 2.80e-19 | 89.4 |
| Msa1022110 | AT4G08180.4 | 31.416 | 226 | 134 | 8 | 97 | 315 | 588 | 799 | 2.80e-19 | 89.4 |
| Msa1022110 | AT4G08180.2 | 31.416 | 226 | 134 | 8 | 97 | 315 | 587 | 798 | 2.91e-19 | 89.4 |
| Msa1022110 | AT1G13170.1 | 32.301 | 226 | 134 | 7 | 92 | 311 | 578 | 790 | 4.29e-19 | 89.0 |
| Msa1022110 | AT1G13170.2 | 32.301 | 226 | 134 | 7 | 92 | 311 | 599 | 811 | 4.85e-19 | 88.6 |
| Msa1022110 | AT4G08180.3 | 31.416 | 226 | 134 | 8 | 97 | 315 | 587 | 798 | 2.35e-18 | 86.7 |
| Msa1022110 | AT4G22540.2 | 28.125 | 224 | 144 | 6 | 97 | 315 | 284 | 495 | 1.43e-17 | 84.0 |
| Msa1022110 | AT4G22540.3 | 28.125 | 224 | 144 | 6 | 97 | 315 | 284 | 495 | 1.43e-17 | 84.0 |
| Msa1022110 | AT4G22540.6 | 28.125 | 224 | 144 | 6 | 97 | 315 | 284 | 495 | 1.43e-17 | 84.0 |
| Msa1022110 | AT4G22540.4 | 28.125 | 224 | 144 | 6 | 97 | 315 | 284 | 495 | 1.43e-17 | 84.0 |
| Msa1022110 | AT4G22540.5 | 28.125 | 224 | 144 | 6 | 97 | 315 | 495 | 706 | 1.64e-17 | 84.0 |
| Msa1022110 | AT4G22540.1 | 28.125 | 224 | 144 | 6 | 97 | 315 | 495 | 706 | 1.64e-17 | 84.0 |
| Msa1022110 | AT2G31020.1 | 30.180 | 222 | 135 | 8 | 97 | 315 | 562 | 766 | 3.98e-16 | 79.7 |
| Msa1022110 | AT2G31030.1 | 29.464 | 224 | 134 | 8 | 97 | 315 | 277 | 481 | 3.26e-15 | 76.6 |
Find 103 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGGCAATTTGATAATT+TGG | 0.085476 | 7_1:-47438945 | Msa1022110:CDS |
| GCTTCAACTTTCTCCAATTT+TGG | 0.123553 | 7_1:-47444120 | Msa1022110:CDS |
| TCCAAATGGGTATTAAAATA+TGG | 0.164629 | 7_1:+47444298 | None:intergenic |
| TGAAATTTGATCTTGTTTCT+TGG | 0.217996 | 7_1:-47438830 | Msa1022110:three_prime_UTR |
| CCTGGAAGTGGTTCTCCTTC+AGG | 0.245926 | 7_1:+47440392 | None:intergenic |
| GAAATTTGATCTTGTTTCTT+GGG | 0.259933 | 7_1:-47438829 | Msa1022110:three_prime_UTR |
| TACCATTTATCCATGCAAAA+TGG | 0.285426 | 7_1:+47438749 | None:intergenic |
| CTAGAAGCAGTAGTTTGTTT+AGG | 0.290686 | 7_1:+47444174 | None:intergenic |
| AAATTCTAATAACTGGAAAA+TGG | 0.294958 | 7_1:-47440445 | Msa1022110:CDS |
| TTTCAACCGTGTGGCTGGTT+TGG | 0.299374 | 7_1:-47440859 | Msa1022110:CDS |
| TTCAACCGTGTGGCTGGTTT+GGG | 0.306787 | 7_1:-47440858 | Msa1022110:intron |
| TCTGTCTCTAAATCCGTTAC+TGG | 0.307045 | 7_1:-47444093 | Msa1022110:CDS |
| AATTGCCAAGGATTGAATTC+TGG | 0.309835 | 7_1:+47438956 | None:intergenic |
| GTCTGATGGCAACAACTTCT+TGG | 0.311470 | 7_1:+47439373 | None:intergenic |
| AGAGACAGAAGTGCCAAAAT+TGG | 0.324196 | 7_1:+47444107 | None:intergenic |
| TGATAATTTGGAGGCTGAAT+AGG | 0.326474 | 7_1:-47438933 | Msa1022110:exon |
| TGCTCAAGGGCCATTCTATC+AGG | 0.333635 | 7_1:+47439338 | None:intergenic |
| TCCAACACCTTGGGGTGAAT+TGG | 0.338205 | 7_1:-47439062 | Msa1022110:CDS |
| CTGTATATTTACCGTTGTAT+TGG | 0.342352 | 7_1:+47439032 | None:intergenic |
| TGTTTAGCTTGTGCGCAAAA+TGG | 0.344531 | 7_1:+47439411 | None:intergenic |
| CCTGAAGGAGAACCACTTCC+AGG | 0.345218 | 7_1:-47440392 | Msa1022110:CDS |
| AGTTGCTGAAACTCCTAAAA+AGG | 0.350695 | 7_1:-47439450 | Msa1022110:CDS |
| ACCATCTAGGAGTGAACTTC+TGG | 0.351260 | 7_1:+47439107 | None:intergenic |
| TACAGGAACGGGATAGTTAC+TGG | 0.352770 | 7_1:-47442509 | Msa1022110:intron |
| TTACCTGCTCTTCTCGTTGC+CGG | 0.355589 | 7_1:+47439298 | None:intergenic |
| CTGGAAGTGGTTCTCCTTCA+GGG | 0.390296 | 7_1:+47440393 | None:intergenic |
| CCAAATGGGTATTAAAATAT+GGG | 0.405512 | 7_1:+47444299 | None:intergenic |
| ATAATAATAACAATAACTTT+AGG | 0.406226 | 7_1:+47444352 | None:intergenic |
| TCCATTGGTGCCATGGAAAT+CGG | 0.411063 | 7_1:+47444198 | None:intergenic |
| ACTTCTGGTTCTTCGCCTCT+CGG | 0.421507 | 7_1:+47439122 | None:intergenic |
| AAATTTGATCTTGTTTCTTG+GGG | 0.422553 | 7_1:-47438828 | Msa1022110:three_prime_UTR |
| ACGAACTTGGATTGATTCAC+CGG | 0.427585 | 7_1:-47440932 | Msa1022110:CDS |
| ACCAGAAGTTCACTCCTAGA+TGG | 0.427680 | 7_1:-47439108 | Msa1022110:CDS |
| GGAAGTAACTCCAACACCTT+GGG | 0.435181 | 7_1:-47439071 | Msa1022110:CDS |
| TTGAGCTCAGTGCCTGGAAG+TGG | 0.441386 | 7_1:+47440380 | None:intergenic |
| ATTCTTTGTAGCATCGTCAT+TGG | 0.443051 | 7_1:+47442417 | None:intergenic |
| AGAGAACAGCGAAGAAAAGT+TGG | 0.443319 | 7_1:+47444421 | None:intergenic |
| AGATGGTGTGACGCTTGATT+TGG | 0.443745 | 7_1:-47440992 | Msa1022110:CDS |
| TCTTATATCTGAAAATAACT+AGG | 0.445000 | 7_1:+47438559 | None:intergenic |
| TGATAGAATGGCCCTTGAGC+AGG | 0.445077 | 7_1:-47439336 | Msa1022110:CDS |
| TTTGTGAAACACGCGCTTAG+TGG | 0.449157 | 7_1:+47444529 | None:intergenic |
| CTAAAGTTTAACGATCCAAA+TGG | 0.455145 | 7_1:+47444284 | None:intergenic |
| ACCTCTTTGAGCTCAGTGCC+TGG | 0.457360 | 7_1:+47440374 | None:intergenic |
| GTCCTGACAAATTTGACTAC+GGG | 0.464111 | 7_1:-47440901 | Msa1022110:CDS |
| ACCGATTTCCATGGCACCAA+TGG | 0.467780 | 7_1:-47444199 | Msa1022110:exon |
| TCTGATGGCAACAACTTCTT+GGG | 0.469985 | 7_1:+47439374 | None:intergenic |
| GTTTAGCTTGTGCGCAAAAT+GGG | 0.476797 | 7_1:+47439412 | None:intergenic |
| CAGGGTGACCTATCCGTGTC+CGG | 0.480998 | 7_1:-47439317 | Msa1022110:CDS |
| TTGGCAATTTGATAATTTGG+AGG | 0.489898 | 7_1:-47438942 | Msa1022110:CDS |
| GTAGTTTGTTTAGGATCCAT+TGG | 0.490818 | 7_1:+47444183 | None:intergenic |
| TTTAGGATCCATTGGTGCCA+TGG | 0.491784 | 7_1:+47444191 | None:intergenic |
| TCCAATTCACCCCAAGGTGT+TGG | 0.497219 | 7_1:+47439061 | None:intergenic |
| CATATCCATCCACTTCATAT+CGG | 0.502430 | 7_1:+47440492 | None:intergenic |
| GAAAAGTTGGGATATTTCGT+TGG | 0.508228 | 7_1:+47444434 | None:intergenic |
| GCTTCTAGTAGTAGTGGTGG+TGG | 0.508922 | 7_1:-47444159 | Msa1022110:CDS |
| TGTGCGCAAAATGGGTGTAT+TGG | 0.508928 | 7_1:+47439420 | None:intergenic |
| CATGTCATTTATAGCAGAGC+AGG | 0.509505 | 7_1:-47441839 | Msa1022110:intron |
| CGAACTTGGATTGATTCACC+GGG | 0.510339 | 7_1:-47440931 | Msa1022110:CDS |
| TAAAGTTTAACGATCCAAAT+GGG | 0.516406 | 7_1:+47444285 | None:intergenic |
| GCAAAGAAGATAGCACTAGT+TGG | 0.522290 | 7_1:+47438722 | None:intergenic |
| GAGAACAGCGAAGAAAAGTT+GGG | 0.528867 | 7_1:+47444422 | None:intergenic |
| ATAGACCAGAATTCAATCCT+TGG | 0.532358 | 7_1:-47438961 | Msa1022110:CDS |
| TCGTCTTCGTCCTGATAGAA+TGG | 0.535385 | 7_1:-47439348 | Msa1022110:CDS |
| TCTCGTTGCCGGACACGGAT+AGG | 0.536153 | 7_1:+47439309 | None:intergenic |
| AGGAAGTAACTCCAACACCT+TGG | 0.537285 | 7_1:-47439072 | Msa1022110:CDS |
| AAGTTGGGATATTTCGTTGG+CGG | 0.537530 | 7_1:+47444437 | None:intergenic |
| GGTCCTGACAAATTTGACTA+CGG | 0.538233 | 7_1:-47440902 | Msa1022110:CDS |
| GCTCTTCTCGTTGCCGGACA+CGG | 0.540689 | 7_1:+47439304 | None:intergenic |
| AATGACGATGCTACAAAGAA+TGG | 0.551198 | 7_1:-47442415 | Msa1022110:CDS |
| TGTCCGGCAACGAGAAGAGC+AGG | 0.556678 | 7_1:-47439301 | Msa1022110:intron |
| TCTGTCAGATCAAACCATCT+AGG | 0.561419 | 7_1:+47439094 | None:intergenic |
| TTAACAACTTCCAATCCCTC+AGG | 0.574758 | 7_1:+47443383 | None:intergenic |
| TCCAAATTATCAAATTGCCA+AGG | 0.578229 | 7_1:+47438944 | None:intergenic |
| CTGTCTCTAAATCCGTTACT+GGG | 0.578382 | 7_1:-47444092 | Msa1022110:intron |
| GATAGAATGGCCCTTGAGCA+GGG | 0.578871 | 7_1:-47439335 | Msa1022110:CDS |
| CGGATAGGTCACCCTGCTCA+AGG | 0.585127 | 7_1:+47439324 | None:intergenic |
| GCTGGCCGATATGAAGTGGA+TGG | 0.593394 | 7_1:-47440497 | Msa1022110:CDS |
| AATTTGATCTTGTTTCTTGG+GGG | 0.593464 | 7_1:-47438827 | Msa1022110:three_prime_UTR |
| TATCAAGTTTGTGACCCTGA+AGG | 0.595390 | 7_1:-47440407 | Msa1022110:CDS |
| TGGCTCTGATATCACATCAA+TGG | 0.599652 | 7_1:-47442466 | Msa1022110:CDS |
| AGGCTGAATAGGCATTCTTG+TGG | 0.605046 | 7_1:-47438922 | Msa1022110:exon |
| GGACGAAGACGAGAGTCTGA+TGG | 0.607644 | 7_1:+47439359 | None:intergenic |
| GGATAGGTCACCCTGCTCAA+GGG | 0.609499 | 7_1:+47439325 | None:intergenic |
| ACTACTGCTTCTAGTAGTAG+TGG | 0.614539 | 7_1:-47444165 | Msa1022110:CDS |
| AAAATGATGCAAAAGTATGT+TGG | 0.618288 | 7_1:-47442486 | Msa1022110:CDS |
| GATGCTACAAAGAATGGCTG+AGG | 0.619746 | 7_1:-47442409 | Msa1022110:intron |
| CGTGTTACACTCAAAAGAGA+TGG | 0.622793 | 7_1:-47441009 | Msa1022110:CDS |
| TAAACTTCCAATTCACCCCA+AGG | 0.625431 | 7_1:+47439055 | None:intergenic |
| CAGAGCTGGCCGATATGAAG+TGG | 0.634968 | 7_1:-47440501 | Msa1022110:CDS |
| TTTGTCAGGACCATATCCCC+CGG | 0.638714 | 7_1:+47440913 | None:intergenic |
| TCCAGGCACTGAGCTCAAAG+AGG | 0.639649 | 7_1:-47440375 | Msa1022110:intron |
| ATAAGAAACATACCCAGTAA+CGG | 0.644588 | 7_1:+47444080 | None:intergenic |
| ACTGCTTCTAGTAGTAGTGG+TGG | 0.656420 | 7_1:-47444162 | Msa1022110:CDS |
| TCCTGACAAATTTGACTACG+GGG | 0.660297 | 7_1:-47440900 | Msa1022110:CDS |
| AACTTGGATTGATTCACCGG+GGG | 0.663951 | 7_1:-47440929 | Msa1022110:CDS |
| TTGGAAGTTTACCAATACAA+CGG | 0.666339 | 7_1:-47439043 | Msa1022110:CDS |
| TCATACCCAAACCAGCCACA+CGG | 0.689650 | 7_1:+47440853 | None:intergenic |
| CCTGACAAATTTGACTACGG+GGG | 0.691506 | 7_1:-47440899 | Msa1022110:CDS |
| TAGATGGTTTGATCTGACAG+AGG | 0.699389 | 7_1:-47439092 | Msa1022110:CDS |
| AGCTGAGAAGAGAAACCGAG+AGG | 0.718676 | 7_1:-47439137 | Msa1022110:CDS |
| GAACTTGGATTGATTCACCG+GGG | 0.721206 | 7_1:-47440930 | Msa1022110:CDS |
| GAAGTAACTCCAACACCTTG+GGG | 0.745042 | 7_1:-47439070 | Msa1022110:CDS |
| CAGAACTATCTACAGCAGCG+CGG | 0.791276 | 7_1:+47439005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAACAATAACTTT+AGG | + | chr7_1:47438742-47438761 | None:intergenic | 10.0% |
| !!! | AAAAATTATCTTTTTTCAAT+TGG | - | chr7_1:47438845-47438864 | Msa1022110:three_prime_UTR | 10.0% |
| !!! | AAAATTATCTTTTTTCAATT+GGG | - | chr7_1:47438846-47438865 | Msa1022110:three_prime_UTR | 10.0% |
| !!! | TTTTGTAATTTTTATTTATG+TGG | - | chr7_1:47439077-47439096 | Msa1022110:CDS | 10.0% |
| !!! | TTTGTAATTTTTATTTATGT+GGG | - | chr7_1:47439078-47439097 | Msa1022110:CDS | 10.0% |
| !!! | TGGTTTTTTTTTTTTTAATA+TGG | - | chr7_1:47439178-47439197 | Msa1022110:intron | 10.0% |
| !!! | TATGATGTATAATTTTTTAT+TGG | - | chr7_1:47439203-47439222 | Msa1022110:intron | 10.0% |
| !! | ATATATATATATATATCACT+TGG | - | chr7_1:47440959-47440978 | Msa1022110:CDS | 10.0% |
| !!! | TTATATTTTTTTTGTAATGT+TGG | - | chr7_1:47441969-47441988 | Msa1022110:intron | 10.0% |
| !! | AAAATGATTACATTATATTA+GGG | + | chr7_1:47442475-47442494 | None:intergenic | 10.0% |
| !!! | ATGTAAATTGTATAATTTTA+AGG | - | chr7_1:47443520-47443539 | Msa1022110:intron | 10.0% |
| !!! | GATAATTTTTTTGATGAAAT+TGG | + | chr7_1:47438835-47438854 | None:intergenic | 15.0% |
| !!! | TTTCATTTGTTATTTAAGTT+TGG | - | chr7_1:47441824-47441843 | Msa1022110:intron | 15.0% |
| !!! | TTCATTTGTTATTTAAGTTT+GGG | - | chr7_1:47441825-47441844 | Msa1022110:intron | 15.0% |
| !!! | ATTTTAAACTGTGTATTATA+TGG | - | chr7_1:47441899-47441918 | Msa1022110:intron | 15.0% |
| !! | TTAAATTGAAGTAAAACATA+AGG | + | chr7_1:47441936-47441955 | None:intergenic | 15.0% |
| !!! | ATGTTTTACTTCAATTTAAT+CGG | - | chr7_1:47441937-47441956 | Msa1022110:intron | 15.0% |
| !! | CAAAATGATTACATTATATT+AGG | + | chr7_1:47442476-47442495 | None:intergenic | 15.0% |
| !! | TTAGAATATATACTATACAA+AGG | - | chr7_1:47443093-47443112 | Msa1022110:intron | 15.0% |
| !! | TAGAATATATACTATACAAA+GGG | - | chr7_1:47443094-47443113 | Msa1022110:intron | 15.0% |
| !! | AACTTATGAACAAATTATTT+GGG | + | chr7_1:47443401-47443420 | None:intergenic | 15.0% |
| !! | TAACTTATGAACAAATTATT+TGG | + | chr7_1:47443402-47443421 | None:intergenic | 15.0% |
| !! | AAAATGACAGTTAAAAAAAT+AGG | + | chr7_1:47444202-47444221 | None:intergenic | 15.0% |
| !!! | AAAGTATTTGAGTTATTTCT+TGG | - | chr7_1:47439604-47439623 | Msa1022110:intron | 20.0% |
| !! | GAGAAAATGAAATAATTGAA+TGG | - | chr7_1:47439858-47439877 | Msa1022110:intron | 20.0% |
| !! | TCTTTGTGTTGTATTATTTA+TGG | - | chr7_1:47439952-47439971 | Msa1022110:intron | 20.0% |
| !! | TTATAAAAACAAATTGCTAC+AGG | - | chr7_1:47441453-47441472 | Msa1022110:intron | 20.0% |
| !! | TCAAAACTAACAAAATCTAT+TGG | + | chr7_1:47441659-47441678 | None:intergenic | 20.0% |
| !! | AGTTAAGATTATTATACGAA+AGG | + | chr7_1:47441702-47441721 | None:intergenic | 20.0% |
| !!! | TCATTTGTTATTTAAGTTTG+GGG | - | chr7_1:47441826-47441845 | Msa1022110:intron | 20.0% |
| !! | AAAAAAAGATTAATTGCCAA+TGG | - | chr7_1:47441876-47441895 | Msa1022110:intron | 20.0% |
| !!! | AAAATTAGCAACTTGATTTT+TGG | - | chr7_1:47442136-47442155 | Msa1022110:intron | 20.0% |
| !! | ATGCATAAATAAGAAATTAC+TGG | + | chr7_1:47442367-47442386 | None:intergenic | 20.0% |
| !!! | TTTCCAGTTATTAGAATTTT+TGG | + | chr7_1:47442645-47442664 | None:intergenic | 20.0% |
| !! | AAATTCTAATAACTGGAAAA+TGG | - | chr7_1:47442646-47442665 | Msa1022110:intron | 20.0% |
| !!! | TAGCTTTGGAATTAAATTTT+AGG | - | chr7_1:47442877-47442896 | Msa1022110:intron | 20.0% |
| !! | TTAAATTGGGATTATATAAC+AGG | - | chr7_1:47442954-47442973 | Msa1022110:intron | 20.0% |
| !!! | ACTAAACCTGTTATATTTTT+TGG | + | chr7_1:47442990-47443009 | None:intergenic | 20.0% |
| !!! | AAGAATTAGTTGATTCAATT+TGG | + | chr7_1:47443021-47443040 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTCTTAGTTA+TGG | - | chr7_1:47443067-47443086 | Msa1022110:intron | 20.0% |
| !!! | ACTGTTTTTATCGTAAAAAA+AGG | - | chr7_1:47443190-47443209 | Msa1022110:intron | 20.0% |
| !!! | CTGTTTTTATCGTAAAAAAA+GGG | - | chr7_1:47443191-47443210 | Msa1022110:intron | 20.0% |
| !!! | CTTAAACTTATTTTTCAGTT+TGG | - | chr7_1:47443918-47443937 | Msa1022110:intron | 20.0% |
| !! | TATATACAATTCTCTAGTTA+CGG | - | chr7_1:47444456-47444475 | Msa1022110:five_prime_UTR | 20.0% |
| ! | AGACGTTAGAAAAATCAAAA+GGG | + | chr7_1:47438594-47438613 | None:intergenic | 25.0% |
| ! | AAGACGTTAGAAAAATCAAA+AGG | + | chr7_1:47438595-47438614 | None:intergenic | 25.0% |
| ! | CCAAATGGGTATTAAAATAT+GGG | + | chr7_1:47438795-47438814 | None:intergenic | 25.0% |
| ! | TCCAAATGGGTATTAAAATA+TGG | + | chr7_1:47438796-47438815 | None:intergenic | 25.0% |
| ! | TAAAGTTTAACGATCCAAAT+GGG | + | chr7_1:47438809-47438828 | None:intergenic | 25.0% |
| !! | ATTGGGTTTCTATTTTCATA+AGG | - | chr7_1:47438863-47438882 | Msa1022110:three_prime_UTR | 25.0% |
| ! | ATTGAACAAGTTTGAAAGTA+TGG | + | chr7_1:47439041-47439060 | None:intergenic | 25.0% |
| ! | GGATTATCATCTTTCAAAAT+TGG | - | chr7_1:47439158-47439177 | Msa1022110:CDS | 25.0% |
| !!! | TATTGGTGTTATTAATACTC+CGG | - | chr7_1:47439220-47439239 | Msa1022110:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr7_1:47439338-47439357 | None:intergenic | 25.0% |
| !! | TTTTGATGTTTAAGTGTTAG+TGG | - | chr7_1:47439569-47439588 | Msa1022110:intron | 25.0% |
| ! | TTCATTCTTTCATTCCTTAT+TGG | + | chr7_1:47440052-47440071 | None:intergenic | 25.0% |
| ! | CAATCTAGATTATGTTATAG+AGG | - | chr7_1:47440101-47440120 | Msa1022110:intron | 25.0% |
| !!! | TCTATTTTTGTTGTTAGAGA+TGG | - | chr7_1:47440138-47440157 | Msa1022110:intron | 25.0% |
| !!! | CTATTTTTGTTGTTAGAGAT+GGG | - | chr7_1:47440139-47440158 | Msa1022110:intron | 25.0% |
| !!! | TACAAAGTTTTGTCAAATAG+CGG | + | chr7_1:47440320-47440339 | None:intergenic | 25.0% |
| ! | GAATACATTTATCTATCTCA+TGG | - | chr7_1:47440465-47440484 | Msa1022110:CDS | 25.0% |
| !! | AAAATGATGCAAAAGTATGT+TGG | - | chr7_1:47440605-47440624 | Msa1022110:intron | 25.0% |
| ! | ACTGAAGAAAGAAAATAAAC+AGG | + | chr7_1:47441290-47441309 | None:intergenic | 25.0% |
| ! | AAAAAATACATGACAAAGAG+AGG | + | chr7_1:47441351-47441370 | None:intergenic | 25.0% |
| ! | AAACTGAAAACCAAATTTCT+TGG | - | chr7_1:47441544-47441563 | Msa1022110:intron | 25.0% |
| !! | ATACACAGTTTAAAATCCAT+TGG | + | chr7_1:47441895-47441914 | None:intergenic | 25.0% |
| ! | AACTGTGTATTATATGGATA+AGG | - | chr7_1:47441905-47441924 | Msa1022110:intron | 25.0% |
| !!! | ATCAAGTTGCTAATTTTTGT+AGG | + | chr7_1:47442133-47442152 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGCGATAATTT+AGG | + | chr7_1:47442273-47442292 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTAGTTTACTTG+TGG | - | chr7_1:47442389-47442408 | Msa1022110:intron | 25.0% |
| ! | GTATGAAACTAAAAGTTCAA+TGG | + | chr7_1:47442530-47442549 | None:intergenic | 25.0% |
| ! | GAACCAAAAATTCTAATAAC+TGG | - | chr7_1:47442639-47442658 | Msa1022110:intron | 25.0% |
| ! | AATTTAATTCCAAAGCTATC+AGG | + | chr7_1:47442875-47442894 | None:intergenic | 25.0% |
| ! | GTGTAACCAAAAAATATAAC+AGG | - | chr7_1:47442981-47443000 | Msa1022110:intron | 25.0% |
| !! | ATCAAGTTAAATTTGACTTC+AGG | + | chr7_1:47443044-47443063 | None:intergenic | 25.0% |
| ! | ATTAAGATGTTAATCCAAAC+AGG | + | chr7_1:47443120-47443139 | None:intergenic | 25.0% |
| ! | AACTGTTTCATATGAACAAT+AGG | - | chr7_1:47443250-47443269 | Msa1022110:intron | 25.0% |
| !! | TATTGGAATTTGTCCTTTTT+AGG | + | chr7_1:47443657-47443676 | None:intergenic | 25.0% |
| !!! | AAACTTATTTTTCAGTTTGG+AGG | - | chr7_1:47443921-47443940 | Msa1022110:intron | 25.0% |
| !! | TGAAATTTGATCTTGTTTCT+TGG | - | chr7_1:47444261-47444280 | Msa1022110:five_prime_UTR | 25.0% |
| !! | GAAATTTGATCTTGTTTCTT+GGG | - | chr7_1:47444262-47444281 | Msa1022110:five_prime_UTR | 25.0% |
| !! | AAATTTGATCTTGTTTCTTG+GGG | - | chr7_1:47444263-47444282 | Msa1022110:five_prime_UTR | 25.0% |
| TTAGAAAAATCAAAAGGGGT+GGG | + | chr7_1:47438589-47438608 | None:intergenic | 30.0% | |
| GACGTTAGAAAAATCAAAAG+GGG | + | chr7_1:47438593-47438612 | None:intergenic | 30.0% | |
| !!! | CCCATATTTTAATACCCATT+TGG | - | chr7_1:47438792-47438811 | Msa1022110:three_prime_UTR | 30.0% |
| CTAAAGTTTAACGATCCAAA+TGG | + | chr7_1:47438810-47438829 | None:intergenic | 30.0% | |
| ATAAGAAACATACCCAGTAA+CGG | + | chr7_1:47439014-47439033 | None:intergenic | 30.0% | |
| ACTTCCATGATCTAGTAAAA+GGG | + | chr7_1:47439126-47439145 | None:intergenic | 30.0% | |
| !! | CATGGAAGTGATTATTTTTC+TGG | - | chr7_1:47439137-47439156 | Msa1022110:CDS | 30.0% |
| TCGTATCAGTAAGTAAAGTA+TGG | - | chr7_1:47439278-47439297 | Msa1022110:intron | 30.0% | |
| TGTTAATAATTGTTCCACTC+AGG | - | chr7_1:47439393-47439412 | Msa1022110:CDS | 30.0% | |
| ACATCAGAAACTAAGTAGTT+GGG | + | chr7_1:47439478-47439497 | None:intergenic | 30.0% | |
| TACATCAGAAACTAAGTAGT+TGG | + | chr7_1:47439479-47439498 | None:intergenic | 30.0% | |
| ! | TTATTTCTTGGAGTTTGTGT+TGG | - | chr7_1:47439616-47439635 | Msa1022110:intron | 30.0% |
| !!! | TTGATTTTTAGTACTCCTGA+GGG | - | chr7_1:47439693-47439712 | Msa1022110:intron | 30.0% |
| ! | ATACCTTCAATCTGAAATGT+CGG | - | chr7_1:47439909-47439928 | Msa1022110:intron | 30.0% |
| TATAAAAGTCACCAATCACA+AGG | - | chr7_1:47439989-47440008 | Msa1022110:intron | 30.0% | |
| ATTCTTTCATTCCTTATTGG+TGG | + | chr7_1:47440049-47440068 | None:intergenic | 30.0% | |
| TGTTATAGAGGCAACAAATT+TGG | - | chr7_1:47440113-47440132 | Msa1022110:intron | 30.0% | |
| TAAAACAGTGTTCTCAATTG+CGG | - | chr7_1:47440232-47440251 | Msa1022110:intron | 30.0% | |
| !! | ACAAAGTTTTGTCAAATAGC+GGG | + | chr7_1:47440319-47440338 | None:intergenic | 30.0% |
| TAATATGTCATGCAAACCAA+TGG | - | chr7_1:47440427-47440446 | Msa1022110:CDS | 30.0% | |
| TACATTTATCTATCTCATGG+TGG | - | chr7_1:47440468-47440487 | Msa1022110:CDS | 30.0% | |
| ATGTACAAAAGAACACTTGA+GGG | + | chr7_1:47440562-47440581 | None:intergenic | 30.0% | |
| AATGTACAAAAGAACACTTG+AGG | + | chr7_1:47440563-47440582 | None:intergenic | 30.0% | |
| ! | AGTGTTCTTTTGTACATTAC+AGG | - | chr7_1:47440565-47440584 | Msa1022110:intron | 30.0% |
| ! | TCTTTTGTACATTACAGGAA+CGG | - | chr7_1:47440570-47440589 | Msa1022110:intron | 30.0% |
| TTATCTAATTTCACAGCTCA+TGG | - | chr7_1:47440811-47440830 | Msa1022110:intron | 30.0% | |
| GTACTCTTACCTATTAGATA+TGG | - | chr7_1:47440835-47440854 | Msa1022110:intron | 30.0% | |
| TGCTAAGTGTTATCAAATTC+TGG | + | chr7_1:47441018-47441037 | None:intergenic | 30.0% | |
| TATCTCACATACACAACATT+TGG | - | chr7_1:47441089-47441108 | Msa1022110:intron | 30.0% | |
| ATCTCACATACACAACATTT+GGG | - | chr7_1:47441090-47441109 | Msa1022110:intron | 30.0% | |
| AAACCATTCAATCCAATTCT+TGG | - | chr7_1:47441199-47441218 | Msa1022110:intron | 30.0% | |
| !!! | GTATTTTTTTACAATGCCTC+TGG | - | chr7_1:47441362-47441381 | Msa1022110:intron | 30.0% |
| CCTTAAAACGACAACTAAAA+AGG | + | chr7_1:47441614-47441633 | None:intergenic | 30.0% | |
| !!! | CCTTTTTAGTTGTCGTTTTA+AGG | - | chr7_1:47441611-47441630 | Msa1022110:intron | 30.0% |
| TGACAAAACAACAGTTAAAG+AGG | - | chr7_1:47441774-47441793 | Msa1022110:intron | 30.0% | |
| TGTGTATTATATGGATAAGG+AGG | - | chr7_1:47441908-47441927 | Msa1022110:intron | 30.0% | |
| ! | AGTTGCTAATTTTTGTAGGT+GGG | + | chr7_1:47442129-47442148 | None:intergenic | 30.0% |
| ! | AAGTTGCTAATTTTTGTAGG+TGG | + | chr7_1:47442130-47442149 | None:intergenic | 30.0% |
| ATGGAGCAAGTAATTGAAAT+TGG | + | chr7_1:47442511-47442530 | None:intergenic | 30.0% | |
| !!! | TAGAATTTTTGGTTCTTCAG+AGG | + | chr7_1:47442634-47442653 | None:intergenic | 30.0% |
| TATGCTTTGCAAACAAACTT+CGG | + | chr7_1:47442917-47442936 | None:intergenic | 30.0% | |
| !! | TGCTTTGGAGATGATTAAAT+TGG | - | chr7_1:47442940-47442959 | Msa1022110:intron | 30.0% |
| !! | GCTTTGGAGATGATTAAATT+GGG | - | chr7_1:47442941-47442960 | Msa1022110:intron | 30.0% |
| ! | TAGTTGATTCAATTTGGCTA+CGG | + | chr7_1:47443015-47443034 | None:intergenic | 30.0% |
| CATCTTAATTAAGCGCTTAT+AGG | - | chr7_1:47443131-47443150 | Msa1022110:intron | 30.0% | |
| CTGTAGTCAAAGAGAAAATA+TGG | - | chr7_1:47443224-47443243 | Msa1022110:intron | 30.0% | |
| TACAAACCAAAGATGTCAAA+AGG | - | chr7_1:47443857-47443876 | Msa1022110:intron | 30.0% | |
| ACAAACCAAAGATGTCAAAA+GGG | - | chr7_1:47443858-47443877 | Msa1022110:intron | 30.0% | |
| TTGGAAGTTTACCAATACAA+CGG | - | chr7_1:47444048-47444067 | Msa1022110:intron | 30.0% | |
| CTGTATATTTACCGTTGTAT+TGG | + | chr7_1:47444062-47444081 | None:intergenic | 30.0% | |
| ! | TTGAATTCTGGTCTATTTTC+AGG | + | chr7_1:47444126-47444145 | None:intergenic | 30.0% |
| ! | TCCTTGGCAATTTGATAATT+TGG | - | chr7_1:47444146-47444165 | Msa1022110:CDS | 30.0% |
| TCCAAATTATCAAATTGCCA+AGG | + | chr7_1:47444150-47444169 | None:intergenic | 30.0% | |
| ! | TTGGCAATTTGATAATTTGG+AGG | - | chr7_1:47444149-47444168 | Msa1022110:CDS | 30.0% |
| ! | AATTTGATCTTGTTTCTTGG+GGG | - | chr7_1:47444264-47444283 | Msa1022110:five_prime_UTR | 30.0% |
| ! | TTAGTTCAATCCATTTTGCA+TGG | - | chr7_1:47444332-47444351 | Msa1022110:five_prime_UTR | 30.0% |
| ! | ATCCATTTTGCATGGATAAA+TGG | - | chr7_1:47444340-47444359 | Msa1022110:five_prime_UTR | 30.0% |
| TACCATTTATCCATGCAAAA+TGG | + | chr7_1:47444345-47444364 | None:intergenic | 30.0% | |
| TAGAAAAATCAAAAGGGGTG+GGG | + | chr7_1:47438588-47438607 | None:intergenic | 35.0% | |
| GTTAGAAAAATCAAAAGGGG+TGG | + | chr7_1:47438590-47438609 | None:intergenic | 35.0% | |
| GAAAAGTTGGGATATTTCGT+TGG | + | chr7_1:47438660-47438679 | None:intergenic | 35.0% | |
| !! | GTAGTTTGTTTAGGATCCAT+TGG | + | chr7_1:47438911-47438930 | None:intergenic | 35.0% |
| !! | CTAGAAGCAGTAGTTTGTTT+AGG | + | chr7_1:47438920-47438939 | None:intergenic | 35.0% |
| ! | GCTTCAACTTTCTCCAATTT+TGG | - | chr7_1:47438971-47438990 | Msa1022110:CDS | 35.0% |
| ! | TTTCCCCTTTTACTAGATCA+TGG | - | chr7_1:47439119-47439138 | Msa1022110:CDS | 35.0% |
| CTTCCATGATCTAGTAAAAG+GGG | + | chr7_1:47439125-47439144 | None:intergenic | 35.0% | |
| CACTTCCATGATCTAGTAAA+AGG | + | chr7_1:47439127-47439146 | None:intergenic | 35.0% | |
| TTATTAATACTCCGGTTGCT+GGG | - | chr7_1:47439228-47439247 | Msa1022110:intron | 35.0% | |
| TTCCACTCAGGAATTGAATT+TGG | - | chr7_1:47439405-47439424 | Msa1022110:CDS | 35.0% | |
| ATCCAAATTCAATTCCTGAG+TGG | + | chr7_1:47439410-47439429 | None:intergenic | 35.0% | |
| !!! | GTTGATTTTTAGTACTCCTG+AGG | - | chr7_1:47439692-47439711 | Msa1022110:intron | 35.0% |
| TTGGAAGTTGTTAATCCAGA+AGG | - | chr7_1:47439717-47439736 | Msa1022110:intron | 35.0% | |
| ! | TTTCAGATTGAAGGTATGTC+AGG | + | chr7_1:47439906-47439925 | None:intergenic | 35.0% |
| AATTATGCTGACCACCAATA+AGG | - | chr7_1:47440035-47440054 | Msa1022110:intron | 35.0% | |
| GAATCTGTAAAGTTACACTG+TGG | - | chr7_1:47440069-47440088 | Msa1022110:intron | 35.0% | |
| GGAATGTGCATATTGAAACA+TGG | - | chr7_1:47440160-47440179 | Msa1022110:intron | 35.0% | |
| TTGTACGAAACATCGTATTG+CGG | - | chr7_1:47440335-47440354 | Msa1022110:intron | 35.0% | |
| ! | TTTATCTATCTCATGGTGGA+TGG | - | chr7_1:47440472-47440491 | Msa1022110:CDS | 35.0% |
| !! | TTATCTATCTCATGGTGGAT+GGG | - | chr7_1:47440473-47440492 | Msa1022110:CDS | 35.0% |
| ! | CTTTTGTACATTACAGGAAC+GGG | - | chr7_1:47440571-47440590 | Msa1022110:intron | 35.0% |
| ! | ATTGGCTCAAAAACGATAAC+TGG | + | chr7_1:47440659-47440678 | None:intergenic | 35.0% |
| ATTCTTTGTAGCATCGTCAT+TGG | + | chr7_1:47440677-47440696 | None:intergenic | 35.0% | |
| AATGACGATGCTACAAAGAA+TGG | - | chr7_1:47440676-47440695 | Msa1022110:intron | 35.0% | |
| CTCTTACCTATTAGATATGG+CGG | - | chr7_1:47440838-47440857 | Msa1022110:intron | 35.0% | |
| AAGTCTCATGTATGGATCAT+CGG | + | chr7_1:47440870-47440889 | None:intergenic | 35.0% | |
| GCATATACAAGTCTCATGTA+TGG | + | chr7_1:47440878-47440897 | None:intergenic | 35.0% | |
| GACTATGAAATGATGCTTAC+AGG | + | chr7_1:47440900-47440919 | None:intergenic | 35.0% | |
| TGGTTAAAACTGTAGTGTAG+CGG | + | chr7_1:47440998-47441017 | None:intergenic | 35.0% | |
| ! | GATACAGTATAGCGGAATTT+AGG | + | chr7_1:47441073-47441092 | None:intergenic | 35.0% |
| GTATGTGAGATACAGTATAG+CGG | + | chr7_1:47441081-47441100 | None:intergenic | 35.0% | |
| !! | TGCTGCAAAAAGCATCTATA+AGG | + | chr7_1:47441137-47441156 | None:intergenic | 35.0% |
| ACTTATGAAATGGCTAACCA+CGG | - | chr7_1:47441226-47441245 | Msa1022110:intron | 35.0% | |
| ! | GCATGTAAACTTGGTGAAAT+CGG | + | chr7_1:47441329-47441348 | None:intergenic | 35.0% |
| GAAAACTATGCATATTCCAG+AGG | + | chr7_1:47441381-47441400 | None:intergenic | 35.0% | |
| AACCAAATTTCTTGGCAACT+CGG | - | chr7_1:47441552-47441571 | Msa1022110:intron | 35.0% | |
| TCTCTGCAATAAGTTGTTCA+AGG | - | chr7_1:47441745-47441764 | Msa1022110:intron | 35.0% | |
| AACAGTTAAAGAGGAACTGA+GGG | - | chr7_1:47441783-47441802 | Msa1022110:intron | 35.0% | |
| TTAAGTTTGGGGATTGTTAG+TGG | - | chr7_1:47441837-47441856 | Msa1022110:intron | 35.0% | |
| ! | TTGCTAATTTTTGTAGGTGG+GGG | + | chr7_1:47442127-47442146 | None:intergenic | 35.0% |
| ! | GTTGCTAATTTTTGTAGGTG+GGG | + | chr7_1:47442128-47442147 | None:intergenic | 35.0% |
| !! | ACTTGATTTTTGGACGAACT+TGG | - | chr7_1:47442146-47442165 | Msa1022110:intron | 35.0% |
| ACATTTACATATTGCAGAGC+TGG | - | chr7_1:47442576-47442595 | Msa1022110:intron | 35.0% | |
| CATATCCATCCACTTCATAT+CGG | + | chr7_1:47442602-47442621 | None:intergenic | 35.0% | |
| CAACTCTTTCATCGATGTTA+TGG | - | chr7_1:47442748-47442767 | Msa1022110:intron | 35.0% | |
| ! | ATCTAAAAGAGTGTGCTGTT+AGG | + | chr7_1:47442796-47442815 | None:intergenic | 35.0% |
| TTGCAAAGCATATGATGCTT+TGG | - | chr7_1:47442925-47442944 | Msa1022110:intron | 35.0% | |
| ! | AGTTGATTCAATTTGGCTAC+GGG | + | chr7_1:47443014-47443033 | None:intergenic | 35.0% |
| TAATGCTGATACGCTTTCTA+AGG | + | chr7_1:47443292-47443311 | None:intergenic | 35.0% | |
| CTACTAACACAAGCATTTGA+CGG | + | chr7_1:47443373-47443392 | None:intergenic | 35.0% | |
| AGTTGCTGAAACTCCTAAAA+AGG | - | chr7_1:47443641-47443660 | Msa1022110:intron | 35.0% | |
| !! | ACATCTTTGGTTTGTAGAGA+GGG | + | chr7_1:47443853-47443872 | None:intergenic | 35.0% |
| CAAACCAAAGATGTCAAAAG+GGG | - | chr7_1:47443859-47443878 | Msa1022110:intron | 35.0% | |
| AAACCAAAGATGTCAAAAGG+GGG | - | chr7_1:47443860-47443879 | Msa1022110:intron | 35.0% | |
| !! | TATTTTTCAGTTTGGAGGAG+AGG | - | chr7_1:47443926-47443945 | Msa1022110:intron | 35.0% |
| ATAGACCAGAATTCAATCCT+TGG | - | chr7_1:47444130-47444149 | Msa1022110:CDS | 35.0% | |
| AATTGCCAAGGATTGAATTC+TGG | + | chr7_1:47444138-47444157 | None:intergenic | 35.0% | |
| TGATAATTTGGAGGCTGAAT+AGG | - | chr7_1:47444158-47444177 | Msa1022110:CDS | 35.0% | |
| AAGTTGGGATATTTCGTTGG+CGG | + | chr7_1:47438657-47438676 | None:intergenic | 40.0% | |
| GAGAACAGCGAAGAAAAGTT+GGG | + | chr7_1:47438672-47438691 | None:intergenic | 40.0% | |
| AGAGAACAGCGAAGAAAAGT+TGG | + | chr7_1:47438673-47438692 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTCACCGATTTCCA+TGG | - | chr7_1:47438883-47438902 | Msa1022110:three_prime_UTR | 40.0% |
| ACTACTGCTTCTAGTAGTAG+TGG | - | chr7_1:47438926-47438945 | Msa1022110:exon | 40.0% | |
| !! | AGAGACAGAAGTGCCAAAAT+TGG | + | chr7_1:47438987-47439006 | None:intergenic | 40.0% |
| TCTGTCTCTAAATCCGTTAC+TGG | - | chr7_1:47438998-47439017 | Msa1022110:CDS | 40.0% | |
| CTGTCTCTAAATCCGTTACT+GGG | - | chr7_1:47438999-47439018 | Msa1022110:CDS | 40.0% | |
| AGGGGAAATCGATGATTTCA+AGG | + | chr7_1:47439107-47439126 | None:intergenic | 40.0% | |
| GTTATTAATACTCCGGTTGC+TGG | - | chr7_1:47439227-47439246 | Msa1022110:intron | 40.0% | |
| TATTAATACTCCGGTTGCTG+GGG | - | chr7_1:47439229-47439248 | Msa1022110:intron | 40.0% | |
| ! | GGACTTGGTAATTCAGAGTT+CGG | - | chr7_1:47439255-47439274 | Msa1022110:intron | 40.0% |
| GTATGGTCAACTATGAAGCA+CGG | - | chr7_1:47439295-47439314 | Msa1022110:intron | 40.0% | |
| TCAACTATGAAGCACGGATA+CGG | - | chr7_1:47439301-47439320 | Msa1022110:intron | 40.0% | |
| GTCCGAATGATTCATCCTAT+GGG | - | chr7_1:47439432-47439451 | Msa1022110:CDS | 40.0% | |
| TCCGAATGATTCATCCTATG+GGG | - | chr7_1:47439433-47439452 | Msa1022110:CDS | 40.0% | |
| TCCCCATAGGATGAATCATT+CGG | + | chr7_1:47439437-47439456 | None:intergenic | 40.0% | |
| GTAGTTAATTAGCTCCCCAT+AGG | + | chr7_1:47439450-47439469 | None:intergenic | 40.0% | |
| !! | TCTTGGAGTTTGTGTTGGTT+TGG | - | chr7_1:47439621-47439640 | Msa1022110:intron | 40.0% |
| ! | TTTTAGTACTCCTGAGGGAT+TGG | - | chr7_1:47439698-47439717 | Msa1022110:intron | 40.0% |
| TTAACAACTTCCAATCCCTC+AGG | + | chr7_1:47439711-47439730 | None:intergenic | 40.0% | |
| GAAGTTGTTAATCCAGAAGG+TGG | - | chr7_1:47439720-47439739 | Msa1022110:intron | 40.0% | |
| TGTTAATCCAGAAGGTGGAA+CGG | - | chr7_1:47439725-47439744 | Msa1022110:intron | 40.0% | |
| TGTTAGTGTCAGTGCTTCAT+AGG | + | chr7_1:47439813-47439832 | None:intergenic | 40.0% | |
| CATGAATGCAACCTTGTGAT+TGG | + | chr7_1:47440003-47440022 | None:intergenic | 40.0% | |
| TATGTCATGCAAACCAATGG+TGG | - | chr7_1:47440430-47440449 | Msa1022110:CDS | 40.0% | |
| CAGATAATCAATGCCACCAT+TGG | + | chr7_1:47440446-47440465 | None:intergenic | 40.0% | |
| !! | TGGCTCTGATATCACATCAA+TGG | - | chr7_1:47440625-47440644 | Msa1022110:intron | 40.0% |
| TCTCATCCGCCATATCTAAT+AGG | + | chr7_1:47440847-47440866 | None:intergenic | 40.0% | |
| ACATTTGGGCATACATTGCA+TGG | - | chr7_1:47441104-47441123 | Msa1022110:intron | 40.0% | |
| ACTATGCCTATCAACGAACA+TGG | - | chr7_1:47441176-47441195 | Msa1022110:intron | 40.0% | |
| TGGTTTCCATGTTCGTTGAT+AGG | + | chr7_1:47441185-47441204 | None:intergenic | 40.0% | |
| TCGCCAAGAATTGGATTGAA+TGG | + | chr7_1:47441205-47441224 | None:intergenic | 40.0% | |
| TCATAAGTCTCGCCAAGAAT+TGG | + | chr7_1:47441214-47441233 | None:intergenic | 40.0% | |
| TCTTGGCGAGACTTATGAAA+TGG | - | chr7_1:47441216-47441235 | Msa1022110:intron | 40.0% | |
| ! | CATGTCATTTATAGCAGAGC+AGG | - | chr7_1:47441252-47441271 | Msa1022110:intron | 40.0% |
| ! | CAAAGAGAGGCATGTAAACT+TGG | + | chr7_1:47441338-47441357 | None:intergenic | 40.0% |
| ! | ATGTTCATTTTCAGCATGCC+CGG | + | chr7_1:47441503-47441522 | None:intergenic | 40.0% |
| CTGATGTATATCCTGTTGGA+AGG | - | chr7_1:47441575-47441594 | Msa1022110:intron | 40.0% | |
| ATTGCAGAGAGAGGAATATG+TGG | + | chr7_1:47441735-47441754 | None:intergenic | 40.0% | |
| GAACAACTTATTGCAGAGAG+AGG | + | chr7_1:47441744-47441763 | None:intergenic | 40.0% | |
| CAACAGTTAAAGAGGAACTG+AGG | - | chr7_1:47441782-47441801 | Msa1022110:intron | 40.0% | |
| TAAACGCGCTACTACTTATC+TGG | - | chr7_1:47442049-47442068 | Msa1022110:intron | 40.0% | |
| CGTGTTACACTCAAAAGAGA+TGG | - | chr7_1:47442082-47442101 | Msa1022110:intron | 40.0% | |
| ! | ACGAACTTGGATTGATTCAC+CGG | - | chr7_1:47442159-47442178 | Msa1022110:intron | 40.0% |
| GGTCCTGACAAATTTGACTA+CGG | - | chr7_1:47442189-47442208 | Msa1022110:intron | 40.0% | |
| GTCCTGACAAATTTGACTAC+GGG | - | chr7_1:47442190-47442209 | Msa1022110:intron | 40.0% | |
| TCCTGACAAATTTGACTACG+GGG | - | chr7_1:47442191-47442210 | Msa1022110:intron | 40.0% | |
| !!! | GTGCTTTATTTTCAACCGTG+TGG | - | chr7_1:47442223-47442242 | Msa1022110:intron | 40.0% |
| !! | TTTATTTTCAACCGTGTGGC+TGG | - | chr7_1:47442227-47442246 | Msa1022110:intron | 40.0% |
| GTGCATATACTGTAGGTTAC+AGG | + | chr7_1:47442313-47442332 | None:intergenic | 40.0% | |
| GTAACCTACAGTATATGCAC+TGG | - | chr7_1:47442313-47442332 | Msa1022110:intron | 40.0% | |
| ! | AATTACTGGCTGCTACAGTA+TGG | + | chr7_1:47442353-47442372 | None:intergenic | 40.0% |
| TATCAAGTTTGTGACCCTGA+AGG | - | chr7_1:47442684-47442703 | Msa1022110:intron | 40.0% | |
| CTCATTAAGCCTGATAGCTT+TGG | - | chr7_1:47442863-47442882 | Msa1022110:intron | 40.0% | |
| TACTATACAAAGGGCCTGTT+TGG | - | chr7_1:47443103-47443122 | Msa1022110:intron | 40.0% | |
| ACAAGCATTTGACGGTGTTT+GGG | + | chr7_1:47443365-47443384 | None:intergenic | 40.0% | |
| GAAGACACTCTTTCAGTGTT+TGG | + | chr7_1:47443427-47443446 | None:intergenic | 40.0% | |
| !! | AACACTGAAAGAGTGTCTTC+AGG | - | chr7_1:47443427-47443446 | Msa1022110:intron | 40.0% |
| ! | ATCAAGTTGTTCCATTCTGC+AGG | - | chr7_1:47443611-47443630 | Msa1022110:intron | 40.0% |
| !! | GTTTAGCTTGTGCGCAAAAT+GGG | + | chr7_1:47443682-47443701 | None:intergenic | 40.0% |
| !! | TGTTTAGCTTGTGCGCAAAA+TGG | + | chr7_1:47443683-47443702 | None:intergenic | 40.0% |
| TCTGATGGCAACAACTTCTT+GGG | + | chr7_1:47443720-47443739 | None:intergenic | 40.0% | |
| !! | GACATCTTTGGTTTGTAGAG+AGG | + | chr7_1:47443854-47443873 | None:intergenic | 40.0% |
| TCTGTCAGATCAAACCATCT+AGG | + | chr7_1:47444000-47444019 | None:intergenic | 40.0% | |
| TAGATGGTTTGATCTGACAG+AGG | - | chr7_1:47443999-47444018 | Msa1022110:intron | 40.0% | |
| TAAACTTCCAATTCACCCCA+AGG | + | chr7_1:47444039-47444058 | None:intergenic | 40.0% | |
| GCAAAGAAGATAGCACTAGT+TGG | + | chr7_1:47444372-47444391 | None:intergenic | 40.0% | |
| !! | TCCATTGGTGCCATGGAAAT+CGG | + | chr7_1:47438896-47438915 | None:intergenic | 45.0% |
| !! | TTTAGGATCCATTGGTGCCA+TGG | + | chr7_1:47438903-47438922 | None:intergenic | 45.0% |
| ACTGCTTCTAGTAGTAGTGG+TGG | - | chr7_1:47438929-47438948 | Msa1022110:exon | 45.0% | |
| CGTCCGAATGATTCATCCTA+TGG | - | chr7_1:47439431-47439450 | Msa1022110:CDS | 45.0% | |
| ACTAACAGACACGTTGACAC+TGG | - | chr7_1:47439826-47439845 | Msa1022110:intron | 45.0% | |
| ! | GCACCGACATTTCAGATTGA+AGG | + | chr7_1:47439915-47439934 | None:intergenic | 45.0% |
| ACATGCAGAGAAGAGCTCAT+AGG | + | chr7_1:47440212-47440231 | None:intergenic | 45.0% | |
| GCAATTGCTTGTGGACATTG+CGG | + | chr7_1:47440400-47440419 | None:intergenic | 45.0% | |
| TGTCCACAAGCAATTGCAAG+CGG | - | chr7_1:47440403-47440422 | Msa1022110:CDS | 45.0% | |
| TATCCGCTTGCAATTGCTTG+TGG | + | chr7_1:47440409-47440428 | None:intergenic | 45.0% | |
| TACAGGAACGGGATAGTTAC+TGG | - | chr7_1:47440582-47440601 | Msa1022110:intron | 45.0% | |
| GATGCTACAAAGAATGGCTG+AGG | - | chr7_1:47440682-47440701 | Msa1022110:intron | 45.0% | |
| TAGCACTAAATCACGTACCG+CGG | - | chr7_1:47441033-47441052 | Msa1022110:intron | 45.0% | |
| !! | AGGTGAACAGCTATTTTCCG+CGG | + | chr7_1:47441053-47441072 | None:intergenic | 45.0% |
| TATGAAATGGCTAACCACGG+TGG | - | chr7_1:47441229-47441248 | Msa1022110:intron | 45.0% | |
| CTATAAATGACATGCCACCG+TGG | + | chr7_1:47441246-47441265 | None:intergenic | 45.0% | |
| AGCCGAGTTGCCAAGAAATT+TGG | + | chr7_1:47441557-47441576 | None:intergenic | 45.0% | |
| TCGGCTGATGTATATCCTGT+TGG | - | chr7_1:47441571-47441590 | Msa1022110:intron | 45.0% | |
| CAACAAGACTACCTTCCAAC+AGG | + | chr7_1:47441589-47441608 | None:intergenic | 45.0% | |
| GCTACTACTTATCTGGATGC+AGG | - | chr7_1:47442056-47442075 | Msa1022110:intron | 45.0% | |
| AGATGGTGTGACGCTTGATT+TGG | - | chr7_1:47442099-47442118 | Msa1022110:intron | 45.0% | |
| ! | CGAACTTGGATTGATTCACC+GGG | - | chr7_1:47442160-47442179 | Msa1022110:intron | 45.0% |
| ! | GAACTTGGATTGATTCACCG+GGG | - | chr7_1:47442161-47442180 | Msa1022110:intron | 45.0% |
| ! | AACTTGGATTGATTCACCGG+GGG | - | chr7_1:47442162-47442181 | Msa1022110:intron | 45.0% |
| CCTGACAAATTTGACTACGG+GGG | - | chr7_1:47442192-47442211 | Msa1022110:intron | 45.0% | |
| CCATCCAGTGCATATACTGT+AGG | + | chr7_1:47442320-47442339 | None:intergenic | 45.0% | |
| CCTACAGTATATGCACTGGA+TGG | - | chr7_1:47442317-47442336 | Msa1022110:intron | 45.0% | |
| CATCGATGTTATGGCCATAG+AGG | - | chr7_1:47442757-47442776 | Msa1022110:intron | 45.0% | |
| GCGATAGCATATCACCTCTA+TGG | + | chr7_1:47442774-47442793 | None:intergenic | 45.0% | |
| CACAAGCATTTGACGGTGTT+TGG | + | chr7_1:47443366-47443385 | None:intergenic | 45.0% | |
| GTTGTTCCATTCTGCAGGTT+TGG | - | chr7_1:47443616-47443635 | Msa1022110:intron | 45.0% | |
| AACTCTCCAAACCTGCAGAA+TGG | + | chr7_1:47443625-47443644 | None:intergenic | 45.0% | |
| TGTGCGCAAAATGGGTGTAT+TGG | + | chr7_1:47443674-47443693 | None:intergenic | 45.0% | |
| GTCTGATGGCAACAACTTCT+TGG | + | chr7_1:47443721-47443740 | None:intergenic | 45.0% | |
| TCGTCTTCGTCCTGATAGAA+TGG | - | chr7_1:47443743-47443762 | Msa1022110:intron | 45.0% | |
| ! | GAACCCCCTTTTGACATCTT+TGG | + | chr7_1:47443866-47443885 | None:intergenic | 45.0% |
| ACCAGAAGTTCACTCCTAGA+TGG | - | chr7_1:47443983-47444002 | Msa1022110:intron | 45.0% | |
| ACCATCTAGGAGTGAACTTC+TGG | + | chr7_1:47443987-47444006 | None:intergenic | 45.0% | |
| AGGAAGTAACTCCAACACCT+TGG | - | chr7_1:47444019-47444038 | Msa1022110:intron | 45.0% | |
| GGAAGTAACTCCAACACCTT+GGG | - | chr7_1:47444020-47444039 | Msa1022110:intron | 45.0% | |
| GAAGTAACTCCAACACCTTG+GGG | - | chr7_1:47444021-47444040 | Msa1022110:intron | 45.0% | |
| AGGCTGAATAGGCATTCTTG+TGG | - | chr7_1:47444169-47444188 | Msa1022110:CDS | 45.0% | |
| ! | ACCGATTTCCATGGCACCAA+TGG | - | chr7_1:47438892-47438911 | Msa1022110:three_prime_UTR | 50.0% |
| GCTTCTAGTAGTAGTGGTGG+TGG | - | chr7_1:47438932-47438951 | Msa1022110:exon | 50.0% | |
| ! | TATTAGCTGTGTCGGCGTGT+CGG | + | chr7_1:47439330-47439349 | None:intergenic | 50.0% |
| AGAAGGTGGAACGGAAGATG+CGG | - | chr7_1:47439734-47439753 | Msa1022110:intron | 50.0% | |
| TGCGGAAGAGGAAGCTAAGA+AGG | - | chr7_1:47439752-47439771 | Msa1022110:intron | 50.0% | |
| GCGGAAGAGGAAGCTAAGAA+GGG | - | chr7_1:47439753-47439772 | Msa1022110:intron | 50.0% | |
| AGGAAGCTAAGAAGGGACGA+TGG | - | chr7_1:47439760-47439779 | Msa1022110:intron | 50.0% | |
| GAAGGGACGATGGAAAGATG+AGG | - | chr7_1:47439770-47439789 | Msa1022110:intron | 50.0% | |
| !! | TTGTCAAATAGCGGGTGCAG+TGG | + | chr7_1:47440311-47440330 | None:intergenic | 50.0% |
| ! | GATTGATTCACCGGGGGATA+TGG | - | chr7_1:47442168-47442187 | Msa1022110:intron | 50.0% |
| TTTGTCAGGACCATATCCCC+CGG | + | chr7_1:47442181-47442200 | None:intergenic | 50.0% | |
| CCCCCGTAGTCAAATTTGTC+AGG | + | chr7_1:47442195-47442214 | None:intergenic | 50.0% | |
| ! | TTTCAACCGTGTGGCTGGTT+TGG | - | chr7_1:47442232-47442251 | Msa1022110:intron | 50.0% |
| !! | TTCAACCGTGTGGCTGGTTT+GGG | - | chr7_1:47442233-47442252 | Msa1022110:intron | 50.0% |
| TCATACCCAAACCAGCCACA+CGG | + | chr7_1:47442241-47442260 | None:intergenic | 50.0% | |
| ! | GGCTGCTACAGTATGGACTA+TGG | + | chr7_1:47442346-47442365 | None:intergenic | 50.0% |
| CTGGAAGTGGTTCTCCTTCA+GGG | + | chr7_1:47442701-47442720 | None:intergenic | 50.0% | |
| ACGGTGTTTGGGAGAGCTTA+TGG | + | chr7_1:47443354-47443373 | None:intergenic | 50.0% | |
| TGCTCAAGGGCCATTCTATC+AGG | + | chr7_1:47443756-47443775 | None:intergenic | 50.0% | |
| TGATAGAATGGCCCTTGAGC+AGG | - | chr7_1:47443755-47443774 | Msa1022110:intron | 50.0% | |
| GATAGAATGGCCCTTGAGCA+GGG | - | chr7_1:47443756-47443775 | Msa1022110:intron | 50.0% | |
| TTACCTGCTCTTCTCGTTGC+CGG | + | chr7_1:47443796-47443815 | None:intergenic | 50.0% | |
| AGCTGAGAAGAGAAACCGAG+AGG | - | chr7_1:47443954-47443973 | Msa1022110:intron | 50.0% | |
| !! | ACTTCTGGTTCTTCGCCTCT+CGG | + | chr7_1:47443972-47443991 | None:intergenic | 50.0% |
| TCCAACACCTTGGGGTGAAT+TGG | - | chr7_1:47444029-47444048 | Msa1022110:intron | 50.0% | |
| TCCAATTCACCCCAAGGTGT+TGG | + | chr7_1:47444033-47444052 | None:intergenic | 50.0% | |
| CAGAACTATCTACAGCAGCG+CGG | + | chr7_1:47444089-47444108 | None:intergenic | 50.0% | |
| AATACTCCGGTTGCTGGGGA+AGG | - | chr7_1:47439233-47439252 | Msa1022110:intron | 55.0% | |
| ATACTCCGGTTGCTGGGGAA+GGG | - | chr7_1:47439234-47439253 | Msa1022110:intron | 55.0% | |
| GCATCTTCCGTTCCACCTTC+TGG | + | chr7_1:47439735-47439754 | None:intergenic | 55.0% | |
| TGGAACGGAAGATGCGGAAG+AGG | - | chr7_1:47439740-47439759 | Msa1022110:intron | 55.0% | |
| TTGTGGACATTGCGGCGCTA+TGG | + | chr7_1:47440392-47440411 | None:intergenic | 55.0% | |
| CATCACCCTCCAATGAGTGC+CGG | - | chr7_1:47441481-47441500 | Msa1022110:intron | 55.0% | |
| ATCACCCTCCAATGAGTGCC+GGG | - | chr7_1:47441482-47441501 | Msa1022110:intron | 55.0% | |
| CAGAGCTGGCCGATATGAAG+TGG | - | chr7_1:47442590-47442609 | Msa1022110:intron | 55.0% | |
| GCTGGCCGATATGAAGTGGA+TGG | - | chr7_1:47442594-47442613 | Msa1022110:intron | 55.0% | |
| CCTGGAAGTGGTTCTCCTTC+AGG | + | chr7_1:47442702-47442721 | None:intergenic | 55.0% | |
| CCTGAAGGAGAACCACTTCC+AGG | - | chr7_1:47442699-47442718 | Msa1022110:intron | 55.0% | |
| TTGAGCTCAGTGCCTGGAAG+TGG | + | chr7_1:47442714-47442733 | None:intergenic | 55.0% | |
| !! | TCCAGGCACTGAGCTCAAAG+AGG | - | chr7_1:47442716-47442735 | Msa1022110:intron | 55.0% |
| ACCTCTTTGAGCTCAGTGCC+TGG | + | chr7_1:47442720-47442739 | None:intergenic | 55.0% | |
| GGACGAAGACGAGAGTCTGA+TGG | + | chr7_1:47443735-47443754 | None:intergenic | 55.0% | |
| GGATAGGTCACCCTGCTCAA+GGG | + | chr7_1:47443769-47443788 | None:intergenic | 55.0% | |
| CAAGTCCCTTCCCCAGCAAC+CGG | + | chr7_1:47439242-47439261 | None:intergenic | 60.0% | |
| ATTGCGGCGCTATGGCGTAG+TGG | + | chr7_1:47440384-47440403 | None:intergenic | 60.0% | |
| CATGCCCGGCACTCATTGGA+GGG | + | chr7_1:47441489-47441508 | None:intergenic | 60.0% | |
| TCAGCATGCCCGGCACTCAT+TGG | + | chr7_1:47441493-47441512 | None:intergenic | 60.0% | |
| CGGATAGGTCACCCTGCTCA+AGG | + | chr7_1:47443770-47443789 | None:intergenic | 60.0% | |
| CAGGGTGACCTATCCGTGTC+CGG | - | chr7_1:47443774-47443793 | Msa1022110:intron | 60.0% | |
| TCTCGTTGCCGGACACGGAT+AGG | + | chr7_1:47443785-47443804 | None:intergenic | 60.0% | |
| GCTCTTCTCGTTGCCGGACA+CGG | + | chr7_1:47443790-47443809 | None:intergenic | 60.0% | |
| TGTCCGGCAACGAGAAGAGC+AGG | - | chr7_1:47443790-47443809 | Msa1022110:intron | 60.0% | |
| CGGTTGCTGGGGAAGGGACT+TGG | - | chr7_1:47439240-47439259 | Msa1022110:intron | 65.0% | |
| GCATGCCCGGCACTCATTGG+AGG | + | chr7_1:47441490-47441509 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 47438563 | 47444550 | 47438563 | ID=Msa1022110;Name=Msa1022110 |
| chr7_1 | mRNA | 47438563 | 47444550 | 47438563 | ID=Msa1022110-mRNA-1;Parent=Msa1022110;Name=Msa1022110-mRNA-1;_AED=0.17;_eAED=0.17;_QI=339|0.62|0.77|1|0.5|0.55|9|301|336 |
| chr7_1 | exon | 47438563 | 47438640 | 47438563 | ID=Msa1022110-mRNA-1:exon:9388;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47438711 | 47439177 | 47438711 | ID=Msa1022110-mRNA-1:exon:9387;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47439302 | 47439480 | 47439302 | ID=Msa1022110-mRNA-1:exon:9386;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47440376 | 47440520 | 47440376 | ID=Msa1022110-mRNA-1:exon:9385;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47440859 | 47441035 | 47440859 | ID=Msa1022110-mRNA-1:exon:9384;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47441840 | 47441847 | 47441840 | ID=Msa1022110-mRNA-1:exon:9383;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47442410 | 47442526 | 47442410 | ID=Msa1022110-mRNA-1:exon:9382;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47443388 | 47443409 | 47443388 | ID=Msa1022110-mRNA-1:exon:9381;Parent=Msa1022110-mRNA-1 |
| chr7_1 | exon | 47444093 | 47444550 | 47444093 | ID=Msa1022110-mRNA-1:exon:9380;Parent=Msa1022110-mRNA-1 |
| chr7_1 | five_prime_UTR | 47444212 | 47444550 | 47444212 | ID=Msa1022110-mRNA-1:five_prime_utr;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47444093 | 47444211 | 47444093 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47443388 | 47443409 | 47443388 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47442410 | 47442526 | 47442410 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47441840 | 47441847 | 47441840 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47440859 | 47441035 | 47440859 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47440376 | 47440520 | 47440376 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47439302 | 47439480 | 47439302 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | CDS | 47438934 | 47439177 | 47438934 | ID=Msa1022110-mRNA-1:cds;Parent=Msa1022110-mRNA-1 |
| chr7_1 | three_prime_UTR | 47438711 | 47438933 | 47438711 | ID=Msa1022110-mRNA-1:three_prime_utr;Parent=Msa1022110-mRNA-1 |
| chr7_1 | three_prime_UTR | 47438563 | 47438640 | 47438563 | ID=Msa1022110-mRNA-1:three_prime_utr;Parent=Msa1022110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
