Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031230 | THU50121.1 | 70.833 | 48 | 14 | 0 | 1 | 48 | 187 | 234 | 2.48e-11 | 70.9 |
| Msa1031230 | THU50121.1 | 84.211 | 76 | 12 | 0 | 48 | 123 | 334 | 409 | 9.33e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031230 | sp|B9DGD6|ACS_ARATH | 81.250 | 48 | 9 | 0 | 48 | 95 | 209 | 256 | 1.97e-18 | 83.2 |
| Msa1031230 | sp|B9DGD6|ACS_ARATH | 88.235 | 34 | 4 | 0 | 90 | 123 | 335 | 368 | 1.01e-13 | 69.7 |
| Msa1031230 | sp|B9DGD6|ACS_ARATH | 66.667 | 48 | 16 | 0 | 1 | 48 | 62 | 109 | 1.52e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031230 | A0A4S8INQ8 | 70.833 | 48 | 14 | 0 | 1 | 48 | 187 | 234 | 1.18e-11 | 70.9 |
| Msa1031230 | A0A4S8INQ8 | 84.211 | 76 | 12 | 0 | 48 | 123 | 334 | 409 | 4.46e-37 | 143 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064110 | Msa1031230 | 0.801287 | 9.669666e-49 | -8.615850e-47 |
| Msa0626280 | Msa1031230 | 0.806084 | 9.768606e-50 | -8.615850e-47 |
| Msa0687450 | Msa1031230 | 0.825728 | 4.000557e-54 | -8.615850e-47 |
| Msa0689760 | Msa1031230 | 0.828021 | 1.132912e-54 | -8.615850e-47 |
| Msa0696850 | Msa1031230 | 0.803379 | 3.585852e-49 | -8.615850e-47 |
| Msa0716860 | Msa1031230 | 0.828757 | 7.528446e-55 | -8.615850e-47 |
| Msa0757800 | Msa1031230 | 0.807098 | 5.966207e-50 | -8.615850e-47 |
| Msa0382260 | Msa1031230 | 0.802855 | 4.601285e-49 | -8.615850e-47 |
| Msa0387250 | Msa1031230 | 0.806764 | 7.020602e-50 | -8.615850e-47 |
| Msa0388220 | Msa1031230 | 0.802745 | 4.848949e-49 | -8.615850e-47 |
| Msa0423840 | Msa1031230 | 0.804256 | 2.357172e-49 | -8.615850e-47 |
| Msa0450350 | Msa1031230 | 0.804674 | 1.928485e-49 | -8.615850e-47 |
| Msa0452810 | Msa1031230 | -0.804504 | 2.092615e-49 | -8.615850e-47 |
| Msa1031230 | Msa1056460 | 0.806902 | 6.565511e-50 | -8.615850e-47 |
| Msa1031230 | Msa1152950 | 0.820283 | 7.442143e-53 | -8.615850e-47 |
| Msa1031230 | Msa1253450 | 0.810979 | 8.805531e-51 | -8.615850e-47 |
| Msa1031230 | Msa1418260 | 0.808947 | 2.410684e-50 | -8.615850e-47 |
| Msa1031230 | Msa1420250 | 0.828676 | 7.874040e-55 | -8.615850e-47 |
| Msa1031230 | Msa1426910 | 0.807043 | 6.129543e-50 | -8.615850e-47 |
| Msa1031230 | Msa1433220 | 0.803803 | 2.927857e-49 | -8.615850e-47 |
| Msa1031230 | Msa1439710 | 0.815534 | 8.799969e-52 | -8.615850e-47 |
| Msa1031230 | Msa1464290 | 0.800586 | 1.344633e-48 | -8.615850e-47 |
| Msa1031230 | Msa1466590 | 0.803344 | 3.645463e-49 | -8.615850e-47 |
| Msa1031230 | Msa1467000 | 0.809592 | 1.753281e-50 | -8.615850e-47 |
| Msa0302890 | Msa1031230 | 0.806123 | 9.585327e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031230 | MtrunA17_Chr7g0252691 | 92.593 | 54 | 1 | 1 | 1 | 54 | 70 | 120 | 2.38e-25 | 99.4 |
| Msa1031230 | MtrunA17_Chr7g0252691 | 86.000 | 50 | 7 | 0 | 48 | 97 | 217 | 266 | 6.86e-22 | 89.7 |
| Msa1031230 | MtrunA17_Chr7g0252691 | 94.118 | 34 | 2 | 0 | 90 | 123 | 343 | 376 | 6.91e-16 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031230 | AT5G36880.4 | 81.250 | 48 | 9 | 0 | 48 | 95 | 159 | 206 | 1.60e-19 | 83.2 |
| Msa1031230 | AT5G36880.4 | 88.235 | 34 | 4 | 0 | 90 | 123 | 285 | 318 | 1.02e-14 | 69.7 |
| Msa1031230 | AT5G36880.4 | 66.667 | 48 | 16 | 0 | 1 | 48 | 12 | 59 | 1.35e-14 | 69.3 |
| Msa1031230 | AT5G36880.2 | 81.250 | 48 | 9 | 0 | 48 | 95 | 209 | 256 | 2.00e-19 | 83.2 |
| Msa1031230 | AT5G36880.2 | 88.235 | 34 | 4 | 0 | 90 | 123 | 335 | 368 | 1.03e-14 | 69.7 |
| Msa1031230 | AT5G36880.2 | 66.667 | 48 | 16 | 0 | 1 | 48 | 62 | 109 | 1.54e-14 | 68.9 |
| Msa1031230 | AT5G36880.6 | 81.250 | 48 | 9 | 0 | 48 | 95 | 159 | 206 | 2.01e-19 | 83.2 |
| Msa1031230 | AT5G36880.6 | 88.235 | 34 | 4 | 0 | 90 | 123 | 285 | 318 | 9.98e-15 | 69.7 |
| Msa1031230 | AT5G36880.6 | 66.667 | 48 | 16 | 0 | 1 | 48 | 12 | 59 | 1.47e-14 | 68.9 |
| Msa1031230 | AT5G36880.3 | 81.250 | 48 | 9 | 0 | 48 | 95 | 159 | 206 | 2.01e-19 | 83.2 |
| Msa1031230 | AT5G36880.3 | 88.235 | 34 | 4 | 0 | 90 | 123 | 285 | 318 | 9.98e-15 | 69.7 |
| Msa1031230 | AT5G36880.3 | 66.667 | 48 | 16 | 0 | 1 | 48 | 12 | 59 | 1.47e-14 | 68.9 |
| Msa1031230 | AT5G36880.5 | 81.250 | 48 | 9 | 0 | 48 | 95 | 159 | 206 | 2.01e-19 | 83.2 |
| Msa1031230 | AT5G36880.5 | 88.235 | 34 | 4 | 0 | 90 | 123 | 285 | 318 | 9.98e-15 | 69.7 |
| Msa1031230 | AT5G36880.5 | 66.667 | 48 | 16 | 0 | 1 | 48 | 12 | 59 | 1.47e-14 | 68.9 |
| Msa1031230 | AT5G36880.1 | 81.250 | 48 | 9 | 0 | 48 | 95 | 159 | 206 | 2.01e-19 | 83.2 |
| Msa1031230 | AT5G36880.1 | 88.235 | 34 | 4 | 0 | 90 | 123 | 285 | 318 | 9.98e-15 | 69.7 |
| Msa1031230 | AT5G36880.1 | 66.667 | 48 | 16 | 0 | 1 | 48 | 12 | 59 | 1.47e-14 | 68.9 |
Find 25 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGATATTGGTGTGAAAA+AGG | 0.199166 | 7_1:+65713975 | Msa1031230:CDS |
| TATTTATTTGCCCATGCTTA+TGG | 0.214590 | 7_1:+65714011 | Msa1031230:CDS |
| CGTTTGAATGCTGTTATTCT+TGG | 0.229941 | 7_1:+65712825 | Msa1031230:CDS |
| GCAAACTACCTGAAAGATAT+TGG | 0.364465 | 7_1:+65713964 | Msa1031230:CDS |
| CCGCATTGGTGCTGTTCATT+CGG | 0.418545 | 7_1:+65714062 | Msa1031230:CDS |
| AAATGTTAAATCTCCAGAAC+AGG | 0.420319 | 7_1:+65712911 | Msa1031230:CDS |
| CTCTATACAAGTGGGAGTAC+CGG | 0.471744 | 7_1:+65716709 | Msa1031230:CDS |
| GCACAAGCAAGCATTGTGAT+AGG | 0.472619 | 7_1:-65714039 | None:intergenic |
| TCAATGAAGATTCTTCCATC+TGG | 0.489627 | 7_1:+65712786 | None:intergenic |
| TGATTAGCAAAATCTTCGCT+TGG | 0.506795 | 7_1:-65712885 | None:intergenic |
| AAGATTCTTCCATCTGGTGC+TGG | 0.513022 | 7_1:+65712792 | Msa1031230:CDS |
| CGAATGAACAGCACCAATGC+GGG | 0.514677 | 7_1:-65714061 | None:intergenic |
| ATGCTTGCTTGTGCCCGCAT+TGG | 0.516940 | 7_1:+65714048 | Msa1031230:CDS |
| CACTCCACTGGACAAGTAGT+TGG | 0.520249 | 7_1:-65716658 | None:intergenic |
| TCTGCATCAAGCCACTCCAC+TGG | 0.521936 | 7_1:-65716670 | None:intergenic |
| GGACAAGTAGTTGGATATTG+AGG | 0.535667 | 7_1:-65716649 | None:intergenic |
| AGTGGAGTGGCTTGATGCAG+AGG | 0.554297 | 7_1:+65716672 | Msa1031230:CDS |
| TGGGAGTACCGGAAAACCTA+AGG | 0.565606 | 7_1:+65716720 | Msa1031230:CDS |
| GATAGGAAGCTCCATAAGCA+TGG | 0.572133 | 7_1:-65714022 | None:intergenic |
| CAACTACTTGTCCAGTGGAG+TGG | 0.592754 | 7_1:+65716659 | Msa1031230:CDS |
| GGAATGCGACCAGCACCAGA+TGG | 0.607599 | 7_1:-65712801 | None:intergenic |
| ATAGGAAGCTCCATAAGCAT+GGG | 0.612788 | 7_1:-65714021 | None:intergenic |
| ATATCCAACTACTTGTCCAG+TGG | 0.622025 | 7_1:+65716654 | Msa1031230:CDS |
| CCGAATGAACAGCACCAATG+CGG | 0.703632 | 7_1:-65714062 | None:intergenic |
| AGAATAACAGCATTCAAACG+AGG | 0.711683 | 7_1:-65712822 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTTTTAATTTCTTT+AGG | + | chr7_1:65714194-65714213 | Msa1031230:intron | 10.0% |
| !! | AAATAATTATTTATAAATGC+TGG | - | chr7_1:65717897-65717916 | None:intergenic | 10.0% |
| !!! | ATTTGAAGTAATAAAAATAA+GGG | + | chr7_1:65718497-65718516 | Msa1031230:intron | 10.0% |
| !!! | AAAACAATTTTTATCTAACA+TGG | - | chr7_1:65712970-65712989 | None:intergenic | 15.0% |
| !!! | ATCAAAATTCAATTTTTTTC+AGG | - | chr7_1:65712996-65713015 | None:intergenic | 15.0% |
| !!! | AAAAATTGAATTTTGATTAG+TGG | + | chr7_1:65712999-65713018 | Msa1031230:intron | 15.0% |
| !!! | AAAATTGAATTTTGATTAGT+GGG | + | chr7_1:65713000-65713019 | Msa1031230:intron | 15.0% |
| !!! | TGAATGTTTTTTTTAATAGA+TGG | + | chr7_1:65713879-65713898 | Msa1031230:intron | 15.0% |
| !! | TATTAAAATTCAAAAATGAG+TGG | + | chr7_1:65714466-65714485 | Msa1031230:intron | 15.0% |
| !! | TATAAAAATCCTTATATGAT+AGG | - | chr7_1:65717855-65717874 | None:intergenic | 15.0% |
| !!! | TTTTAACAATTATGATTACA+AGG | - | chr7_1:65718013-65718032 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr7_1:65718235-65718254 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr7_1:65718234-65718253 | Msa1031230:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_1:65718258-65718277 | Msa1031230:intron | 15.0% |
| !!! | CTATTTTAATGGTAATTAAT+AGG | - | chr7_1:65718461-65718480 | None:intergenic | 15.0% |
| !!! | GAAATCAATTTCTATTTTAA+TGG | - | chr7_1:65718472-65718491 | None:intergenic | 15.0% |
| !!! | CTATTTTAATGGTAATTAAT+AGG | - | chr7_1:65718461-65718480 | None:intergenic | 15.0% |
| !!! | GAAATCAATTTCTATTTTAA+TGG | - | chr7_1:65718472-65718491 | None:intergenic | 15.0% |
| !!! | CTATTTTAATGGTAATTAAT+AGG | - | chr7_1:65718461-65718480 | None:intergenic | 15.0% |
| !!! | GAAATCAATTTCTATTTTAA+TGG | - | chr7_1:65718472-65718491 | None:intergenic | 15.0% |
| !! | CTTATTTAATGGTAATTAAT+AGG | - | chr7_1:65719079-65719098 | None:intergenic | 15.0% |
| !!! | GAAATCAATTTCTTATTTAA+TGG | - | chr7_1:65719090-65719109 | None:intergenic | 15.0% |
| !!! | GATTTGAAGTAATAAAAATA+AGG | + | chr7_1:65718496-65718515 | Msa1031230:intron | 15.0% |
| !!! | TTATTTCTTTCAAAATTAAG+AGG | - | chr7_1:65719519-65719538 | None:intergenic | 15.0% |
| !!! | TTTTGTGATCTATTAGTATT+TGG | + | chr7_1:65713028-65713047 | Msa1031230:intron | 20.0% |
| !! | AATTCTATTGGAAACAAAAA+TGG | + | chr7_1:65713108-65713127 | Msa1031230:intron | 20.0% |
| !! | ATTCTATTGGAAACAAAAAT+GGG | + | chr7_1:65713109-65713128 | Msa1031230:intron | 20.0% |
| !! | AACTCAAATCAAAATCAAAA+TGG | - | chr7_1:65713218-65713237 | None:intergenic | 20.0% |
| !! | CAAACAATTATAACAAATGT+TGG | - | chr7_1:65713314-65713333 | None:intergenic | 20.0% |
| !!! | CAACATTTGTTATAATTGTT+TGG | + | chr7_1:65713312-65713331 | Msa1031230:intron | 20.0% |
| !! | ATTTCACTTTGCATTTATAA+TGG | - | chr7_1:65713597-65713616 | None:intergenic | 20.0% |
| !!! | CAAAGTGAAATATAATGTTT+TGG | + | chr7_1:65713606-65713625 | Msa1031230:intron | 20.0% |
| !!! | AATTTTCTCTTCAAATTTTG+AGG | - | chr7_1:65713658-65713677 | None:intergenic | 20.0% |
| !!! | GTTGTTATTAATACTTTACT+AGG | + | chr7_1:65713759-65713778 | Msa1031230:intron | 20.0% |
| !!! | TTTTGAAATTTCTCAAGTTT+TGG | + | chr7_1:65713852-65713871 | Msa1031230:intron | 20.0% |
| !! | ACTAACAGTATTAAATCAAT+TGG | - | chr7_1:65714178-65714197 | None:intergenic | 20.0% |
| !! | CATTTATTTGTTTATAGTTC+CGG | + | chr7_1:65714395-65714414 | Msa1031230:intron | 20.0% |
| !!! | TGATTGATATTGACTAATAA+AGG | + | chr7_1:65715598-65715617 | Msa1031230:intron | 20.0% |
| !!! | GATTGATATTGACTAATAAA+GGG | + | chr7_1:65715599-65715618 | Msa1031230:intron | 20.0% |
| !!! | GAAATTTGAAATTCTGTTTA+CGG | + | chr7_1:65716515-65716534 | Msa1031230:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr7_1:65718201-65718220 | Msa1031230:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr7_1:65718244-65718263 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_1:65718321-65718340 | Msa1031230:intron | 20.0% |
| !! | TTAATGGTAATTAATAGGAA+TGG | - | chr7_1:65718456-65718475 | None:intergenic | 20.0% |
| !!! | ACTAATAACTTGTATAAGAT+TGG | - | chr7_1:65718615-65718634 | None:intergenic | 20.0% |
| !! | TTAATGGTAATTAATAGGAA+TGG | - | chr7_1:65718456-65718475 | None:intergenic | 20.0% |
| !! | ACTAAAAACTTGTATAAGAT+TGG | - | chr7_1:65718821-65718840 | None:intergenic | 20.0% |
| !! | TTAATGGTAATTAATAGGAA+TGG | - | chr7_1:65718456-65718475 | None:intergenic | 20.0% |
| !! | ACTAAAAACTTGTATAAGAT+TGG | - | chr7_1:65718821-65718840 | None:intergenic | 20.0% |
| !! | TTAATGGTAATTAATAGGAA+TGG | - | chr7_1:65718456-65718475 | None:intergenic | 20.0% |
| !!! | TGTATATTTTAAAACTAGAG+GGG | - | chr7_1:65719188-65719207 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAAAACTAGA+GGG | - | chr7_1:65719189-65719208 | None:intergenic | 20.0% |
| !!! | AGTGTATATTTTAAAACTAG+AGG | - | chr7_1:65719190-65719209 | None:intergenic | 20.0% |
| ! | AAATTGCATCACAATTCTAT+TGG | + | chr7_1:65713096-65713115 | Msa1031230:intron | 25.0% |
| ! | TTCTATTGGAAACAAAAATG+GGG | + | chr7_1:65713110-65713129 | Msa1031230:intron | 25.0% |
| ! | AAAAGGAAATGTTAACATTG+AGG | + | chr7_1:65713166-65713185 | Msa1031230:intron | 25.0% |
| !!! | TTGATTTGAGTTTTGTTCAA+AGG | + | chr7_1:65713226-65713245 | Msa1031230:intron | 25.0% |
| ! | ACTTTGCATTTATAATGGTT+GGG | - | chr7_1:65713592-65713611 | None:intergenic | 25.0% |
| !!! | GGAGATGTATTTTTTTTTTC+AGG | + | chr7_1:65713939-65713958 | Msa1031230:intron | 25.0% |
| ! | AAAGATATTGGTGTGAAAAA+GGG | + | chr7_1:65713976-65713995 | Msa1031230:CDS | 25.0% |
| ! | AAACAAGAAATAACTTGACA+AGG | - | chr7_1:65714110-65714129 | None:intergenic | 25.0% |
| !!! | ATTTCTTTAGGTTGTATTTG+CGG | + | chr7_1:65714206-65714225 | Msa1031230:intron | 25.0% |
| !! | TTGCAAGTAATTACAACTTT+TGG | - | chr7_1:65714276-65714295 | None:intergenic | 25.0% |
| ! | CGGAACTATAAACAAATAAA+TGG | - | chr7_1:65714397-65714416 | None:intergenic | 25.0% |
| !! | ATAACTATTATCTAAAGCAG+AGG | + | chr7_1:65715435-65715454 | Msa1031230:intron | 25.0% |
| !!! | AATAAAAGTTTTTTCCGACA+TGG | + | chr7_1:65716346-65716365 | Msa1031230:intron | 25.0% |
| ! | ACAAGTATATGATCACATAT+AGG | - | chr7_1:65716448-65716467 | None:intergenic | 25.0% |
| ! | ATGAACATTCAAAACATATC+CGG | - | chr7_1:65716544-65716563 | None:intergenic | 25.0% |
| ! | ATAAAAAGAGCAAAAAAGAG+AGG | - | chr7_1:65716606-65716625 | None:intergenic | 25.0% |
| !!! | TTTTTTGCTCTTTTTATTGC+CGG | + | chr7_1:65716609-65716628 | Msa1031230:intron | 25.0% |
| !! | TTTTTCTACTCTATACAAGT+GGG | + | chr7_1:65716701-65716720 | Msa1031230:CDS | 25.0% |
| ! | CAAAATTATGGTTAGTGTAA+CGG | + | chr7_1:65717516-65717535 | Msa1031230:intron | 25.0% |
| !! | ATTTTGCTTTGTATGTATAG+AGG | - | chr7_1:65718044-65718063 | None:intergenic | 25.0% |
| ! | TCTATACATACAAAGCAAAA+TGG | + | chr7_1:65718043-65718062 | Msa1031230:intron | 25.0% |
| ! | GTTAAAATGAATAATCCACT+TGG | + | chr7_1:65718065-65718084 | Msa1031230:intron | 25.0% |
| !! | ATTTTGCTTTGTATGTATAG+AGG | - | chr7_1:65718044-65718063 | None:intergenic | 25.0% |
| ! | TCTATACATACAAAGCAAAA+TGG | + | chr7_1:65718043-65718062 | Msa1031230:intron | 25.0% |
| ! | GTTAAAATGAATAATCCACT+TGG | + | chr7_1:65718065-65718084 | Msa1031230:intron | 25.0% |
| ! | TCTATACATACAAAGCAAAA+TGG | + | chr7_1:65718043-65718062 | Msa1031230:intron | 25.0% |
| ! | GTTAAAATGAATAATCCACT+TGG | + | chr7_1:65718065-65718084 | Msa1031230:intron | 25.0% |
| !! | ATTTTGCTTTGTATGTATAG+AGG | - | chr7_1:65718044-65718063 | None:intergenic | 25.0% |
| ! | TCTATACATACAAAGCAAAA+TGG | + | chr7_1:65718043-65718062 | Msa1031230:intron | 25.0% |
| ! | GTTAAAATGAATAATCCACT+TGG | + | chr7_1:65718065-65718084 | Msa1031230:intron | 25.0% |
| !!! | GTATATTTTAAAACTAGAGG+GGG | - | chr7_1:65719187-65719206 | None:intergenic | 25.0% |
| ! | TCTATTTGATAAGAACTTAG+GGG | - | chr7_1:65719218-65719237 | None:intergenic | 25.0% |
| ! | GTCTATTTGATAAGAACTTA+GGG | - | chr7_1:65719219-65719238 | None:intergenic | 25.0% |
| ! | TGTCTATTTGATAAGAACTT+AGG | - | chr7_1:65719220-65719239 | None:intergenic | 25.0% |
| !! | AATTATGAATGACATGCTTT+TGG | - | chr7_1:65719351-65719370 | None:intergenic | 25.0% |
| ! | AAAGCATGTCATTCATAATT+TGG | + | chr7_1:65719351-65719370 | Msa1031230:intron | 25.0% |
| ! | TACAATGACATCTTTATTCA+AGG | + | chr7_1:65719422-65719441 | Msa1031230:intron | 25.0% |
| !! | ACAAATTTTTGCTGCTAAAA+TGG | - | chr7_1:65719454-65719473 | None:intergenic | 25.0% |
| !!! | CAAAAATTTGTTTTCAAACC+TGG | + | chr7_1:65719463-65719482 | Msa1031230:intron | 25.0% |
| AAATGTTAAATCTCCAGAAC+AGG | + | chr7_1:65712911-65712930 | Msa1031230:CDS | 30.0% | |
| !!! | AACAGGTTTTTTCTTCTTCT+GGG | + | chr7_1:65712928-65712947 | Msa1031230:intron | 30.0% |
| !! | GAGAATTTTGATGTCAGAAA+AGG | + | chr7_1:65713149-65713168 | Msa1031230:intron | 30.0% |
| TTCATTACCTTCCCAATAAA+AGG | - | chr7_1:65713374-65713393 | None:intergenic | 30.0% | |
| ! | AAATCAATCTTATCGACTAG+TGG | + | chr7_1:65713560-65713579 | Msa1031230:intron | 30.0% |
| CACTTTGCATTTATAATGGT+TGG | - | chr7_1:65713593-65713612 | None:intergenic | 30.0% | |
| TTCAAAACTCATAAGTAACC+TGG | - | chr7_1:65713839-65713858 | None:intergenic | 30.0% | |
| TGGTAAAACATAACGACAAT+TGG | + | chr7_1:65713899-65713918 | Msa1031230:intron | 30.0% | |
| ACATAACGACAATTGGTATT+TGG | + | chr7_1:65713906-65713925 | Msa1031230:intron | 30.0% | |
| TTGGTATTTGGTAGAATGAT+TGG | + | chr7_1:65713918-65713937 | Msa1031230:intron | 30.0% | |
| ! | TTTTCACACCAATATCTTTC+AGG | - | chr7_1:65713975-65713994 | None:intergenic | 30.0% |
| GAAAGATATTGGTGTGAAAA+AGG | + | chr7_1:65713975-65713994 | Msa1031230:CDS | 30.0% | |
| TATTTATTTGCCCATGCTTA+TGG | + | chr7_1:65714011-65714030 | Msa1031230:CDS | 30.0% | |
| !! | TTTCTTTAGGTTGTATTTGC+GGG | + | chr7_1:65714207-65714226 | Msa1031230:intron | 30.0% |
| TTACTTGCAATGCTGTTAAA+AGG | + | chr7_1:65714286-65714305 | Msa1031230:intron | 30.0% | |
| TACTTGCAATGCTGTTAAAA+GGG | + | chr7_1:65714287-65714306 | Msa1031230:intron | 30.0% | |
| !!! | ATTTTGAGTTGAATCACTGA+TGG | - | chr7_1:65714352-65714371 | None:intergenic | 30.0% |
| ATCAGTGATTCAACTCAAAA+TGG | + | chr7_1:65714351-65714370 | Msa1031230:intron | 30.0% | |
| AAGAGAAGATATTATAGTGC+CGG | - | chr7_1:65714417-65714436 | None:intergenic | 30.0% | |
| TCTTCTCTTCAGTTATAACT+AGG | + | chr7_1:65714428-65714447 | Msa1031230:intron | 30.0% | |
| CAATCAAATTACTGATGTAG+AGG | - | chr7_1:65715492-65715511 | None:intergenic | 30.0% | |
| GAAACCTAGCATTTAGAAAA+TGG | + | chr7_1:65715537-65715556 | Msa1031230:intron | 30.0% | |
| !!! | TTTGCCATTTTCTAAATGCT+AGG | - | chr7_1:65715544-65715563 | None:intergenic | 30.0% |
| ! | AAGAAGGTTGATCACATAAA+CGG | - | chr7_1:65716037-65716056 | None:intergenic | 30.0% |
| AAGATAATGAAGGTAACATG+AGG | - | chr7_1:65716196-65716215 | None:intergenic | 30.0% | |
| AAGGTCGAATAAGATAATGA+AGG | - | chr7_1:65716206-65716225 | None:intergenic | 30.0% | |
| TGCACAAAATGAAAAGGAAA+AGG | - | chr7_1:65716225-65716244 | None:intergenic | 30.0% | |
| TAGACATGCACAAAATGAAA+AGG | - | chr7_1:65716231-65716250 | None:intergenic | 30.0% | |
| CTATATGTACTAGTTGTAAG+TGG | + | chr7_1:65716373-65716392 | Msa1031230:intron | 30.0% | |
| !! | GGATATGTTTTGAATGTTCA+TGG | + | chr7_1:65716543-65716562 | Msa1031230:intron | 30.0% |
| CTTGTATAGAGTAGAAAAAG+TGG | - | chr7_1:65716700-65716719 | None:intergenic | 30.0% | |
| ! | CTTTTTCTACTCTATACAAG+TGG | + | chr7_1:65716700-65716719 | Msa1031230:CDS | 30.0% |
| ATATCTGCTCTAGTCAATTT+GGG | + | chr7_1:65717062-65717081 | Msa1031230:intron | 30.0% | |
| !!! | GCTTAAGTTTTGAAACTCTA+AGG | + | chr7_1:65717088-65717107 | Msa1031230:intron | 30.0% |
| AAGATGCTTATTGGCAATTT+GGG | + | chr7_1:65717332-65717351 | Msa1031230:intron | 30.0% | |
| ! | TTGATCCATTTGATGACATT+AGG | + | chr7_1:65717479-65717498 | Msa1031230:intron | 30.0% |
| !!! | TGATTTTTTTATGCTCCGTT+TGG | + | chr7_1:65717945-65717964 | Msa1031230:intron | 30.0% |
| ! | ACGGCTGATAAATTAGTTTA+TGG | + | chr7_1:65717980-65717999 | Msa1031230:intron | 30.0% |
| ! | TTTTCTTAAAGCATGACACA+TGG | - | chr7_1:65718112-65718131 | None:intergenic | 30.0% |
| AAACGACACTCATCTTTAAA+CGG | - | chr7_1:65718152-65718171 | None:intergenic | 30.0% | |
| !!! | TTAAAGATGAGTGTCGTTTT+AGG | + | chr7_1:65718153-65718172 | Msa1031230:intron | 30.0% |
| AAGTGGCATTCTTATGAAAA+GGG | - | chr7_1:65718987-65719006 | None:intergenic | 30.0% | |
| ! | TTTTCTTAAAGCATGACAAG+TGG | - | chr7_1:65719004-65719023 | None:intergenic | 30.0% |
| AGAATAACAGCATTCAAACG+AGG | - | chr7_1:65712825-65712844 | None:intergenic | 35.0% | |
| CGTTTGAATGCTGTTATTCT+TGG | + | chr7_1:65712825-65712844 | Msa1031230:CDS | 35.0% | |
| TGATTAGCAAAATCTTCGCT+TGG | - | chr7_1:65712888-65712907 | None:intergenic | 35.0% | |
| GAAGAAGAAAAAACCTGTTC+TGG | - | chr7_1:65712927-65712946 | None:intergenic | 35.0% | |
| !!! | GAACAGGTTTTTTCTTCTTC+TGG | + | chr7_1:65712927-65712946 | Msa1031230:intron | 35.0% |
| GATGTATAAGAGATCCATTG+AGG | + | chr7_1:65713052-65713071 | Msa1031230:intron | 35.0% | |
| ! | ATTTTAGACCAAAATCCAGC+AGG | - | chr7_1:65713080-65713099 | None:intergenic | 35.0% |
| TTTGTTCAAAGGATGATGAG+TGG | + | chr7_1:65713237-65713256 | Msa1031230:intron | 35.0% | |
| CACTGAAACAATGCAACAAA+AGG | - | chr7_1:65713274-65713293 | None:intergenic | 35.0% | |
| ! | CTTTTGTTGCATTGTTTCAG+TGG | + | chr7_1:65713272-65713291 | Msa1031230:intron | 35.0% |
| TTGGATAGAAATGTTGAAGC+TGG | + | chr7_1:65713331-65713350 | Msa1031230:intron | 35.0% | |
| ! | TGACAAAGTGGCCTTTTATT+GGG | + | chr7_1:65713360-65713379 | Msa1031230:intron | 35.0% |
| TATTGGGAAGGTAATGAACT+TGG | + | chr7_1:65713376-65713395 | Msa1031230:intron | 35.0% | |
| ! | TTTGCCAGGTATGTTTTCTT+TGG | + | chr7_1:65713440-65713459 | Msa1031230:intron | 35.0% |
| CTATCCAAAGAAAACATACC+TGG | - | chr7_1:65713447-65713466 | None:intergenic | 35.0% | |
| !!! | ACACTCGTTTTTGAAACAGA+TGG | - | chr7_1:65713490-65713509 | None:intergenic | 35.0% |
| TGAGACTCATTGTGAAACAA+AGG | + | chr7_1:65713734-65713753 | Msa1031230:intron | 35.0% | |
| GAGACTCATTGTGAAACAAA+GGG | + | chr7_1:65713735-65713754 | Msa1031230:intron | 35.0% | |
| !!! | ACTTTACTAGGTTTTGAACC+TGG | + | chr7_1:65713771-65713790 | Msa1031230:intron | 35.0% |
| GTTAAATGAGTTAAAGGACC+AGG | - | chr7_1:65713792-65713811 | None:intergenic | 35.0% | |
| CTGACGGTTAAATGAGTTAA+AGG | - | chr7_1:65713798-65713817 | None:intergenic | 35.0% | |
| GCAAACTACCTGAAAGATAT+TGG | + | chr7_1:65713964-65713983 | Msa1031230:CDS | 35.0% | |
| !! | TTCTTTAGGTTGTATTTGCG+GGG | + | chr7_1:65714208-65714227 | Msa1031230:intron | 35.0% |
| ACTTGCAATGCTGTTAAAAG+GGG | + | chr7_1:65714288-65714307 | Msa1031230:intron | 35.0% | |
| !! | AGAGAGAGAGTATTTGATGT+AGG | + | chr7_1:65715378-65715397 | Msa1031230:intron | 35.0% |
| ! | AGAAGGTTGATCACATAAAC+GGG | - | chr7_1:65716036-65716055 | None:intergenic | 35.0% |
| CAAATACTAGCTAAGGAAGA+AGG | - | chr7_1:65716053-65716072 | None:intergenic | 35.0% | |
| AGTTGGACAAATACTAGCTA+AGG | - | chr7_1:65716060-65716079 | None:intergenic | 35.0% | |
| GTGAGAGAAGTCTAAAAAGT+TGG | - | chr7_1:65716077-65716096 | None:intergenic | 35.0% | |
| ! | TGAGGTATTCTGAATGAAAC+TGG | - | chr7_1:65716178-65716197 | None:intergenic | 35.0% |
| ! | ACAACACATTAGCATTGAAG+AGG | + | chr7_1:65716274-65716293 | Msa1031230:intron | 35.0% |
| ! | CAACACATTAGCATTGAAGA+GGG | + | chr7_1:65716275-65716294 | Msa1031230:intron | 35.0% |
| AGGAAACTAAATGGACGAAA+GGG | + | chr7_1:65716298-65716317 | Msa1031230:intron | 35.0% | |
| GTACATATAGATGACCATGT+CGG | - | chr7_1:65716363-65716382 | None:intergenic | 35.0% | |
| ! | CACAAATACCTTAGGTTTTC+CGG | - | chr7_1:65716731-65716750 | None:intergenic | 35.0% |
| TAACAGCACACAAATACCTT+AGG | - | chr7_1:65716739-65716758 | None:intergenic | 35.0% | |
| AATGAACCTTGTAGACTTCA+TGG | + | chr7_1:65716949-65716968 | Msa1031230:intron | 35.0% | |
| AAAAGTCCATGAAGTCTACA+AGG | - | chr7_1:65716958-65716977 | None:intergenic | 35.0% | |
| ! | GAAGTAGAAAGTGCATTCAA+CGG | + | chr7_1:65717014-65717033 | Msa1031230:intron | 35.0% |
| GATATCTGCTCTAGTCAATT+TGG | + | chr7_1:65717061-65717080 | Msa1031230:intron | 35.0% | |
| TCAGTCATACTTGAATTGTG+AGG | - | chr7_1:65717126-65717145 | None:intergenic | 35.0% | |
| !! | AATTCTAGTTCCTCAAGAAC+AGG | + | chr7_1:65717149-65717168 | Msa1031230:intron | 35.0% |
| ! | GGTATTGAATTCGTTGAAGA+TGG | - | chr7_1:65717203-65717222 | None:intergenic | 35.0% |
| ! | CTCGAAAAGCTTAGTTTGAA+TGG | - | chr7_1:65717224-65717243 | None:intergenic | 35.0% |
| ! | TCGTTTTCTTCCATTGGATT+TGG | - | chr7_1:65717257-65717276 | None:intergenic | 35.0% |
| ! | GGTTTTTCGTTTTCTTCCAT+TGG | - | chr7_1:65717263-65717282 | None:intergenic | 35.0% |
| ! | AAGACTTACAAGTGTTTTGC+AGG | + | chr7_1:65717307-65717326 | Msa1031230:intron | 35.0% |
| GAAGATGCTTATTGGCAATT+TGG | + | chr7_1:65717331-65717350 | Msa1031230:intron | 35.0% | |
| TTATTGGCAATTTGGGTAAC+TGG | + | chr7_1:65717339-65717358 | Msa1031230:intron | 35.0% | |
| GCTATCCTAATGTCATCAAA+TGG | - | chr7_1:65717487-65717506 | None:intergenic | 35.0% | |
| ! | TTTGATGACATTAGGATAGC+TGG | + | chr7_1:65717487-65717506 | Msa1031230:intron | 35.0% |
| AGCTGGAATAGGCAAAATTA+TGG | + | chr7_1:65717504-65717523 | Msa1031230:intron | 35.0% | |
| !! | AATGCTATCGACTTTGATGT+CGG | + | chr7_1:65717634-65717653 | Msa1031230:intron | 35.0% |
| TGAAGTCGACATTAAGAACA+TGG | + | chr7_1:65717657-65717676 | Msa1031230:intron | 35.0% | |
| GAAAAGAAAGAAAGTGACAC+AGG | + | chr7_1:65717741-65717760 | Msa1031230:intron | 35.0% | |
| ACGAAGAAGAAGAAGAAATG+GGG | - | chr7_1:65717811-65717830 | None:intergenic | 35.0% | |
| GACGAAGAAGAAGAAGAAAT+GGG | - | chr7_1:65717812-65717831 | None:intergenic | 35.0% | |
| TGTAAGCTGCCTATCATATA+AGG | + | chr7_1:65717843-65717862 | Msa1031230:intron | 35.0% | |
| ! | TTTTTATGCTCCGTTTGGTA+AGG | + | chr7_1:65717950-65717969 | Msa1031230:intron | 35.0% |
| ATGGCATTCTTATGAAAAGG+AGG | - | chr7_1:65718093-65718112 | None:intergenic | 35.0% | |
| CACATGGCATTCTTATGAAA+AGG | - | chr7_1:65718096-65718115 | None:intergenic | 35.0% | |
| AAACGGAGTGAGTATAAGAT+TGG | - | chr7_1:65718135-65718154 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr7_1:65718283-65718302 | Msa1031230:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_1:65718287-65718306 | Msa1031230:intron | 35.0% |
| AAGCGATACTCATTTCGAAA+CGG | + | chr7_1:65718386-65718405 | Msa1031230:intron | 35.0% | |
| TAACCTTCTCATGTGATTGT+AGG | - | chr7_1:65718432-65718451 | None:intergenic | 35.0% | |
| ACGTGGCATTCTTATGAAAA+GGG | - | chr7_1:65718575-65718594 | None:intergenic | 35.0% | |
| ! | TTTTCTTAAAGCATGACACG+TGG | - | chr7_1:65718592-65718611 | None:intergenic | 35.0% |
| TAACCTTCTCATGTGATTGT+AGG | - | chr7_1:65718432-65718451 | None:intergenic | 35.0% | |
| GTGGTATTCTTATGAAAAGG+AGG | - | chr7_1:65718779-65718798 | None:intergenic | 35.0% | |
| CACGTGGTATTCTTATGAAA+AGG | - | chr7_1:65718782-65718801 | None:intergenic | 35.0% | |
| ! | TTTTCTTAAAGCATGACACG+TGG | - | chr7_1:65718592-65718611 | None:intergenic | 35.0% |
| TAACCTTCTCATGTGATTGT+AGG | - | chr7_1:65718432-65718451 | None:intergenic | 35.0% | |
| AGTGGCATTCTTATGAAAAG+GGG | - | chr7_1:65718986-65719005 | None:intergenic | 35.0% | |
| CAAGTGGCATTCTTATGAAA+AGG | - | chr7_1:65718988-65719007 | None:intergenic | 35.0% | |
| TAACCTTCTCATGTGATTGT+AGG | - | chr7_1:65718432-65718451 | None:intergenic | 35.0% | |
| ATTTAAAAAGACCTCAAGGG+AGG | - | chr7_1:65719154-65719173 | None:intergenic | 35.0% | |
| ! | TCCCTTGAGGTCTTTTTAAA+TGG | + | chr7_1:65719153-65719172 | Msa1031230:intron | 35.0% |
| GCCATTTAAAAAGACCTCAA+GGG | - | chr7_1:65719157-65719176 | None:intergenic | 35.0% | |
| ! | TGCCATTTAAAAAGACCTCA+AGG | - | chr7_1:65719158-65719177 | None:intergenic | 35.0% |
| ATTTGATAAGAACTTAGGGG+AGG | - | chr7_1:65719215-65719234 | None:intergenic | 35.0% | |
| AGACATCCCTTCTTCATTAA+CGG | + | chr7_1:65719241-65719260 | Msa1031230:intron | 35.0% | |
| CTAACACCGTTAATGAAGAA+GGG | - | chr7_1:65719250-65719269 | None:intergenic | 35.0% | |
| ACTAACACCGTTAATGAAGA+AGG | - | chr7_1:65719251-65719270 | None:intergenic | 35.0% | |
| !! | GTAGATCTGGAGAAGTATTT+CGG | - | chr7_1:65719401-65719420 | None:intergenic | 35.0% |
| GATGTCATTGTATGTAGATC+TGG | - | chr7_1:65719414-65719433 | None:intergenic | 35.0% | |
| TGCATTGTTTCAGTGGTTCA+AGG | + | chr7_1:65713279-65713298 | Msa1031230:intron | 40.0% | |
| GCATTGTTTCAGTGGTTCAA+GGG | + | chr7_1:65713280-65713299 | Msa1031230:intron | 40.0% | |
| AGAAATGTTGAAGCTGGACT+AGG | + | chr7_1:65713337-65713356 | Msa1031230:intron | 40.0% | |
| ! | GTGACAAAGTGGCCTTTTAT+TGG | + | chr7_1:65713359-65713378 | Msa1031230:intron | 40.0% |
| ! | AAAGTGGCCTTTTATTGGGA+AGG | + | chr7_1:65713364-65713383 | Msa1031230:intron | 40.0% |
| GCTCAACTAGTATGAACTGA+CGG | - | chr7_1:65713814-65713833 | None:intergenic | 40.0% | |
| TTCATACTAGTTGAGCTACC+AGG | + | chr7_1:65713818-65713837 | Msa1031230:intron | 40.0% | |
| ATAGGAAGCTCCATAAGCAT+GGG | - | chr7_1:65714024-65714043 | None:intergenic | 40.0% | |
| ACTCAAAATGGAGTCTCTGT+AGG | + | chr7_1:65714363-65714382 | Msa1031230:intron | 40.0% | |
| AAAATGGAGTCTCTGTAGGT+AGG | + | chr7_1:65714367-65714386 | Msa1031230:intron | 40.0% | |
| GACTAATAAAGGGTTGACTG+CGG | + | chr7_1:65715609-65715628 | Msa1031230:intron | 40.0% | |
| AAGAAACAATGACGGTATCC+GGG | - | chr7_1:65715666-65715685 | None:intergenic | 40.0% | |
| GAAGAAACAATGACGGTATC+CGG | - | chr7_1:65715667-65715686 | None:intergenic | 40.0% | |
| TCCTGGAGAAGAAACAATGA+CGG | - | chr7_1:65715674-65715693 | None:intergenic | 40.0% | |
| AAAAGAAGTTCATGACCCGT+AGG | + | chr7_1:65715693-65715712 | Msa1031230:intron | 40.0% | |
| TTGATCACATAAACGGGAAG+TGG | - | chr7_1:65716030-65716049 | None:intergenic | 40.0% | |
| GCACAAACATTACAGGTATC+AGG | - | chr7_1:65716138-65716157 | None:intergenic | 40.0% | |
| CACTTCTGCACAAACATTAC+AGG | - | chr7_1:65716145-65716164 | None:intergenic | 40.0% | |
| TGAAGAGGGAGGAAACTAAA+TGG | + | chr7_1:65716289-65716308 | Msa1031230:intron | 40.0% | |
| GAGGAAACTAAATGGACGAA+AGG | + | chr7_1:65716297-65716316 | Msa1031230:intron | 40.0% | |
| ACATATAGGATGCAGCAACT+AGG | - | chr7_1:65716434-65716453 | None:intergenic | 40.0% | |
| GAAATTCTGTTTACGGATGC+CGG | + | chr7_1:65716522-65716541 | Msa1031230:intron | 40.0% | |
| GGACAAGTAGTTGGATATTG+AGG | - | chr7_1:65716652-65716671 | None:intergenic | 40.0% | |
| ATATCCAACTACTTGTCCAG+TGG | + | chr7_1:65716654-65716673 | Msa1031230:CDS | 40.0% | |
| !! | TGTCGGTGCTATATAGATTG+AGG | + | chr7_1:65716897-65716916 | Msa1031230:intron | 40.0% |
| !! | GTCGGTGCTATATAGATTGA+GGG | + | chr7_1:65716898-65716917 | Msa1031230:intron | 40.0% |
| ! | CTTCATGGACTTTTGTGTAC+AGG | + | chr7_1:65716964-65716983 | Msa1031230:intron | 40.0% |
| ! | GATTTTATGTTGCTCCTGTC+TGG | - | chr7_1:65717179-65717198 | None:intergenic | 40.0% |
| !! | AAACTAAGCTTTTCGAGCGA+GGG | + | chr7_1:65717227-65717246 | Msa1031230:intron | 40.0% |
| AACCCTTTACAGAGAATCGA+CGG | + | chr7_1:65717279-65717298 | Msa1031230:intron | 40.0% | |
| TTGCAGGTGAAGATGCTTAT+TGG | + | chr7_1:65717323-65717342 | Msa1031230:intron | 40.0% | |
| GACATTAGGATAGCTGGAAT+AGG | + | chr7_1:65717493-65717512 | Msa1031230:intron | 40.0% | |
| ! | CTAGCGTTTTATCAAAACGC+TGG | - | chr7_1:65717697-65717716 | None:intergenic | 40.0% |
| !! | GCGTTTTGATAAAACGCTAG+TGG | + | chr7_1:65717697-65717716 | Msa1031230:intron | 40.0% |
| CGATAAGATCAGCAGTTTAC+CGG | - | chr7_1:65717774-65717793 | None:intergenic | 40.0% | |
| TAAACTGCTGATCTTATCGC+CGG | + | chr7_1:65717775-65717794 | Msa1031230:intron | 40.0% | |
| CGACGAAGAAGAAGAAGAAA+TGG | - | chr7_1:65717813-65717832 | None:intergenic | 40.0% | |
| CGTTTCCTATCCTTACCAAA+CGG | - | chr7_1:65717963-65717982 | None:intergenic | 40.0% | |
| CGTTTGGTAAGGATAGGAAA+CGG | + | chr7_1:65717961-65717980 | Msa1031230:intron | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_1:65718286-65718305 | Msa1031230:intron | 40.0% |
| GATACTCATTTCGAAACGGA+GGG | + | chr7_1:65718390-65718409 | Msa1031230:intron | 40.0% | |
| AGTCCTACAATCACATGAGA+AGG | + | chr7_1:65718426-65718445 | Msa1031230:intron | 40.0% | |
| !! | TATGAAAAGGGAGTACCAAG+TGG | - | chr7_1:65718563-65718582 | None:intergenic | 40.0% |
| CACGTGGCATTCTTATGAAA+AGG | - | chr7_1:65718576-65718595 | None:intergenic | 40.0% | |
| AGTCCTACAATCACATGAGA+AGG | + | chr7_1:65718426-65718445 | Msa1031230:intron | 40.0% | |
| !! | TATGAAAAGGAGGTACCAAG+TGG | - | chr7_1:65718769-65718788 | None:intergenic | 40.0% |
| AGTCCTACAATCACATGAGA+AGG | + | chr7_1:65718426-65718445 | Msa1031230:intron | 40.0% | |
| GTGGCATTCTTATGAAAAGG+GGG | - | chr7_1:65718573-65718592 | None:intergenic | 40.0% | |
| AGTCCTACAATCACATGAGA+AGG | + | chr7_1:65718426-65718445 | Msa1031230:intron | 40.0% | |
| AATTACACTTACCTCCCTTG+AGG | + | chr7_1:65719140-65719159 | Msa1031230:intron | 40.0% | |
| ! | CCTGGTACTTTAGCTTATCA+CGG | + | chr7_1:65719481-65719500 | Msa1031230:intron | 40.0% |
| AAGATTCTTCCATCTGGTGC+TGG | + | chr7_1:65712792-65712811 | Msa1031230:CDS | 45.0% | |
| AAATCCAGCAGGATCCTCAA+TGG | - | chr7_1:65713069-65713088 | None:intergenic | 45.0% | |
| ! | TTGAGGATCCTGCTGGATTT+TGG | + | chr7_1:65713069-65713088 | Msa1031230:intron | 45.0% |
| TTGTTTCAGTGGTTCAAGGG+TGG | + | chr7_1:65713283-65713302 | Msa1031230:intron | 45.0% | |
| TGTTTCAGTGGTTCAAGGGT+GGG | + | chr7_1:65713284-65713303 | Msa1031230:intron | 45.0% | |
| GCTTCTACATCAAGTTTGCC+AGG | + | chr7_1:65713426-65713445 | Msa1031230:intron | 45.0% | |
| GATAGGAAGCTCCATAAGCA+TGG | - | chr7_1:65714025-65714044 | None:intergenic | 45.0% | |
| ! | GCACAAGCAAGCATTGTGAT+AGG | - | chr7_1:65714042-65714061 | None:intergenic | 45.0% |
| TCATGAGTCCCATATCAGCT+TGG | + | chr7_1:65715402-65715421 | Msa1031230:intron | 45.0% | |
| GTCTCACACCAAGCTGATAT+GGG | - | chr7_1:65715413-65715432 | None:intergenic | 45.0% | |
| TGTCTCACACCAAGCTGATA+TGG | - | chr7_1:65715414-65715433 | None:intergenic | 45.0% | |
| ATGTAGAGGTCCTAAAAGCC+CGG | - | chr7_1:65715478-65715497 | None:intergenic | 45.0% | |
| AGAAACAATGACGGTATCCG+GGG | - | chr7_1:65715665-65715684 | None:intergenic | 45.0% | |
| ! | ACCGTCATTGTTTCTTCTCC+AGG | + | chr7_1:65715670-65715689 | Msa1031230:intron | 45.0% |
| ! | GGGTCATGAACTTCTTTTCC+TGG | - | chr7_1:65715691-65715710 | None:intergenic | 45.0% |
| AGAGGATTATCAGCCACACT+GGG | - | chr7_1:65715816-65715835 | None:intergenic | 45.0% | |
| AGTGTGGCTGATAATCCTCT+CGG | + | chr7_1:65715816-65715835 | Msa1031230:intron | 45.0% | |
| GAGGTAATAGCTTACCAAGG+CGG | - | chr7_1:65715857-65715876 | None:intergenic | 45.0% | |
| GGTGAGGTAATAGCTTACCA+AGG | - | chr7_1:65715860-65715879 | None:intergenic | 45.0% | |
| ! | GTCTGATTAGCTAGTTGGTG+AGG | - | chr7_1:65715876-65715895 | None:intergenic | 45.0% |
| TGCTAATACCCCATAAGCTG+AGG | - | chr7_1:65715934-65715953 | None:intergenic | 45.0% | |
| AGTTGCGAACGTCTGTTACA+TGG | - | chr7_1:65716099-65716118 | None:intergenic | 45.0% | |
| ! | CACATTAGCATTGAAGAGGG+AGG | + | chr7_1:65716278-65716297 | Msa1031230:intron | 45.0% |
| !!! | CTTTTTATTGCCGGTGTTGC+AGG | + | chr7_1:65716618-65716637 | Msa1031230:intron | 45.0% |
| GGAATAACATCCTGCAACAC+CGG | - | chr7_1:65716631-65716650 | None:intergenic | 45.0% | |
| ! | CTCTATACAAGTGGGAGTAC+CGG | + | chr7_1:65716709-65716728 | Msa1031230:CDS | 45.0% |
| ! | GACGATCATCTGTTGGTTGT+CGG | + | chr7_1:65716880-65716899 | Msa1031230:intron | 45.0% |
| !! | CAAACTAAGCTTTTCGAGCG+AGG | + | chr7_1:65717226-65717245 | Msa1031230:intron | 45.0% |
| !! | CTCCGTCGATTCTCTGTAAA+GGG | - | chr7_1:65717284-65717303 | None:intergenic | 45.0% |
| ! | CTCTGACTCTGATGATGATG+AGG | - | chr7_1:65717399-65717418 | None:intergenic | 45.0% |
| !! | GGTTAGTGTAACGGATGTTG+AGG | + | chr7_1:65717525-65717544 | Msa1031230:intron | 45.0% |
| AGCGTAACGAGAGGCTAAAA+CGG | + | chr7_1:65717577-65717596 | Msa1031230:intron | 45.0% | |
| GCTAGTGGTAACTGCTTGTT+GGG | + | chr7_1:65717712-65717731 | Msa1031230:intron | 45.0% | |
| AAGTGACACAGGATCTCATC+CGG | + | chr7_1:65717752-65717771 | Msa1031230:intron | 45.0% | |
| AAGAAGAAGAAATGGGGCGA+CGG | - | chr7_1:65717805-65717824 | None:intergenic | 45.0% | |
| ATGCTCCGTTTGGTAAGGAT+AGG | + | chr7_1:65717955-65717974 | Msa1031230:intron | 45.0% | |
| !! | TATGAAAAGGAGGTGCCAAG+TGG | - | chr7_1:65718083-65718102 | None:intergenic | 45.0% |
| CGATACTCATTTCGAAACGG+AGG | + | chr7_1:65718389-65718408 | Msa1031230:intron | 45.0% | |
| !! | TATGAAAAGGGGGTACCAAG+TGG | - | chr7_1:65718975-65718994 | None:intergenic | 45.0% |
| ! | CCGTGATAAGCTAAAGTACC+AGG | - | chr7_1:65719484-65719503 | None:intergenic | 45.0% |
| AGATCCATTGAGGATCCTGC+TGG | + | chr7_1:65713062-65713081 | Msa1031230:intron | 50.0% | |
| ! | AGCTGGACTAGGTGACAAAG+TGG | + | chr7_1:65713348-65713367 | Msa1031230:intron | 50.0% |
| CGAATGAACAGCACCAATGC+GGG | - | chr7_1:65714064-65714083 | None:intergenic | 50.0% | |
| CCGAATGAACAGCACCAATG+CGG | - | chr7_1:65714065-65714084 | None:intergenic | 50.0% | |
| !! | CCGCATTGGTGCTGTTCATT+CGG | + | chr7_1:65714062-65714081 | Msa1031230:CDS | 50.0% |
| CTAAAAGCCCGGCTGTTAAG+GGG | - | chr7_1:65715467-65715486 | None:intergenic | 50.0% | |
| CCTAAAAGCCCGGCTGTTAA+GGG | - | chr7_1:65715468-65715487 | None:intergenic | 50.0% | |
| TCCTAAAAGCCCGGCTGTTA+AGG | - | chr7_1:65715469-65715488 | None:intergenic | 50.0% | |
| GTTAGCCGATGCTTATTCCC+CGG | + | chr7_1:65715645-65715664 | Msa1031230:intron | 50.0% | |
| GGTATCCGGGGAATAAGCAT+CGG | - | chr7_1:65715653-65715672 | None:intergenic | 50.0% | |
| ! | GGTGGGGAATTTTCCGCAAT+AGG | - | chr7_1:65715758-65715777 | None:intergenic | 50.0% |
| GAGAGGATTATCAGCCACAC+TGG | - | chr7_1:65715817-65715836 | None:intergenic | 50.0% | |
| ! | CTCGCGTCTGATTAGCTAGT+TGG | - | chr7_1:65715881-65715900 | None:intergenic | 50.0% |
| ATAAGCTGAGGAGCGAAAGG+AGG | - | chr7_1:65715922-65715941 | None:intergenic | 50.0% | |
| TCCTTTCGCTCCTCAGCTTA+TGG | + | chr7_1:65715921-65715940 | Msa1031230:intron | 50.0% | |
| CCTTTCGCTCCTCAGCTTAT+GGG | + | chr7_1:65715922-65715941 | Msa1031230:intron | 50.0% | |
| CTTTCGCTCCTCAGCTTATG+GGG | + | chr7_1:65715923-65715942 | Msa1031230:intron | 50.0% | |
| AGGGGAACAACAGCTGGAAA+TGG | - | chr7_1:65715958-65715977 | None:intergenic | 50.0% | |
| GGACGAAAGGGCGAGATATA+TGG | + | chr7_1:65716310-65716329 | Msa1031230:intron | 50.0% | |
| CGAAAGGGCGAGATATATGG+TGG | + | chr7_1:65716313-65716332 | Msa1031230:intron | 50.0% | |
| CACTCCACTGGACAAGTAGT+TGG | - | chr7_1:65716661-65716680 | None:intergenic | 50.0% | |
| CAACTACTTGTCCAGTGGAG+TGG | + | chr7_1:65716659-65716678 | Msa1031230:CDS | 50.0% | |
| !! | TGGGAGTACCGGAAAACCTA+AGG | + | chr7_1:65716720-65716739 | Msa1031230:CDS | 50.0% |
| GTCTGGATGTCCTGTTCTTG+AGG | - | chr7_1:65717162-65717181 | None:intergenic | 50.0% | |
| CAAGAACAGGACATCCAGAC+AGG | + | chr7_1:65717162-65717181 | Msa1031230:intron | 50.0% | |
| CGAGGGAAAGCCAAATCCAA+TGG | + | chr7_1:65717244-65717263 | Msa1031230:intron | 50.0% | |
| !! | CCTCCGTCGATTCTCTGTAA+AGG | - | chr7_1:65717285-65717304 | None:intergenic | 50.0% |
| CCTTTACAGAGAATCGACGG+AGG | + | chr7_1:65717282-65717301 | Msa1031230:intron | 50.0% | |
| CAAAACGCTGGACTCATCTC+TGG | - | chr7_1:65717685-65717704 | None:intergenic | 50.0% | |
| CGCTAGTGGTAACTGCTTGT+TGG | + | chr7_1:65717711-65717730 | Msa1031230:intron | 50.0% | |
| ! | AGTGGTAACTGCTTGTTGGG+TGG | + | chr7_1:65717715-65717734 | Msa1031230:intron | 50.0% |
| ATGCTTGCTTGTGCCCGCAT+TGG | + | chr7_1:65714048-65714067 | Msa1031230:CDS | 55.0% | |
| ! | CCCTTAACAGCCGGGCTTTT+AGG | + | chr7_1:65715465-65715484 | Msa1031230:intron | 55.0% |
| CGTGGAGGTAAAAGGCCTAC+GGG | - | chr7_1:65715711-65715730 | None:intergenic | 55.0% | |
| GCGTGGAGGTAAAAGGCCTA+CGG | - | chr7_1:65715712-65715731 | None:intergenic | 55.0% | |
| ! | GTAGGCCTTTTACCTCCACG+CGG | + | chr7_1:65715711-65715730 | Msa1031230:intron | 55.0% |
| CAATGCCGCGTGGAGGTAAA+AGG | - | chr7_1:65715719-65715738 | None:intergenic | 55.0% | |
| CGCAATAGGCGAAAGCCTGA+CGG | - | chr7_1:65715744-65715763 | None:intergenic | 55.0% | |
| CGTCAGGCTTTCGCCTATTG+CGG | + | chr7_1:65715742-65715761 | Msa1031230:intron | 55.0% | |
| AGACAAGGCCCAGACTCCTA+CGG | - | chr7_1:65715789-65715808 | None:intergenic | 55.0% | |
| TGATCTGTAGCTGGTCCGAG+AGG | - | chr7_1:65715834-65715853 | None:intergenic | 55.0% | |
| AGGAGGAATCCGTCCAAGGA+GGG | - | chr7_1:65715905-65715924 | None:intergenic | 55.0% | |
| AAGGAGGAATCCGTCCAAGG+AGG | - | chr7_1:65715906-65715925 | None:intergenic | 55.0% | |
| CGAAAGGAGGAATCCGTCCA+AGG | - | chr7_1:65715909-65715928 | None:intergenic | 55.0% | |
| CCCATAAGCTGAGGAGCGAA+AGG | - | chr7_1:65715925-65715944 | None:intergenic | 55.0% | |
| AGCTGTTGTTCCCCTCCCAA+GGG | + | chr7_1:65715963-65715982 | Msa1031230:intron | 55.0% | |
| TAAGAACCTGCCCTTGGGAG+GGG | - | chr7_1:65715976-65715995 | None:intergenic | 55.0% | |
| GTAAGAACCTGCCCTTGGGA+GGG | - | chr7_1:65715977-65715996 | None:intergenic | 55.0% | |
| ACGCGTAAGAACCTGCCCTT+GGG | - | chr7_1:65715981-65716000 | None:intergenic | 55.0% | |
| AACGCGTAAGAACCTGCCCT+TGG | - | chr7_1:65715982-65716001 | None:intergenic | 55.0% | |
| GGAAGTGGTGTTTCCAGTGG+CGG | - | chr7_1:65716015-65716034 | None:intergenic | 55.0% | |
| ACGGGAAGTGGTGTTTCCAG+TGG | - | chr7_1:65716018-65716037 | None:intergenic | 55.0% | |
| AGGGCGAGATATATGGTGGC+AGG | + | chr7_1:65716317-65716336 | Msa1031230:intron | 55.0% | |
| TCTGCATCAAGCCACTCCAC+TGG | - | chr7_1:65716673-65716692 | None:intergenic | 55.0% | |
| AGTGGAGTGGCTTGATGCAG+AGG | + | chr7_1:65716672-65716691 | Msa1031230:CDS | 55.0% | |
| AGAGTGAGCAGCGTAACGAG+AGG | + | chr7_1:65717568-65717587 | Msa1031230:intron | 55.0% | |
| GGAATGCGACCAGCACCAGA+TGG | - | chr7_1:65712804-65712823 | None:intergenic | 60.0% | |
| GGCTCTTGCCCCTTAACAGC+CGG | + | chr7_1:65715456-65715475 | Msa1031230:intron | 60.0% | |
| GCTCTTGCCCCTTAACAGCC+GGG | + | chr7_1:65715457-65715476 | Msa1031230:intron | 60.0% | |
| AAAGGGTTGACTGCGGCTGC+TGG | + | chr7_1:65715616-65715635 | Msa1031230:intron | 60.0% | |
| GACAAGGCCCAGACTCCTAC+GGG | - | chr7_1:65715788-65715807 | None:intergenic | 60.0% | |
| GCCTTGTCTCAGTCCCAGTG+TGG | + | chr7_1:65715800-65715819 | Msa1031230:intron | 60.0% | |
| GCCACACTGGGACTGAGACA+AGG | - | chr7_1:65715804-65715823 | None:intergenic | 60.0% | |
| CCAAGGCGGTGATCTGTAGC+TGG | - | chr7_1:65715843-65715862 | None:intergenic | 60.0% | |
| CCAGCTACAGATCACCGCCT+TGG | + | chr7_1:65715840-65715859 | Msa1031230:intron | 60.0% | |
| GGAGGAATCCGTCCAAGGAG+GGG | - | chr7_1:65715904-65715923 | None:intergenic | 60.0% | |
| CTTGGGAGGGGAACAACAGC+TGG | - | chr7_1:65715964-65715983 | None:intergenic | 60.0% | |
| CAGCTGTTGTTCCCCTCCCA+AGG | + | chr7_1:65715962-65715981 | Msa1031230:intron | 60.0% | |
| CGTAAGAACCTGCCCTTGGG+AGG | - | chr7_1:65715978-65715997 | None:intergenic | 60.0% | |
| !! | TGGTGTTTCCAGTGGCGGAC+GGG | - | chr7_1:65716010-65716029 | None:intergenic | 60.0% |
| ! | GTGGTGTTTCCAGTGGCGGA+CGG | - | chr7_1:65716011-65716030 | None:intergenic | 60.0% |
| GAAATGGGGCGACGGAGAAC+CGG | - | chr7_1:65717797-65717816 | None:intergenic | 60.0% | |
| CAGACTCCTACGGGAGGCAG+CGG | - | chr7_1:65715779-65715798 | None:intergenic | 65.0% | |
| GCTGCCTCCCGTAGGAGTCT+GGG | + | chr7_1:65715778-65715797 | Msa1031230:intron | 65.0% | |
| AAGGCCCAGACTCCTACGGG+AGG | - | chr7_1:65715785-65715804 | None:intergenic | 65.0% | |
| ATCAGACGCGAGCCCCTCCT+TGG | + | chr7_1:65715889-65715908 | Msa1031230:intron | 65.0% | |
| GTTGTTCCCCTCCCAAGGGC+AGG | + | chr7_1:65715967-65715986 | Msa1031230:intron | 65.0% | |
| GTTACTCACCCGTCCGCCAC+TGG | + | chr7_1:65715999-65716018 | Msa1031230:intron | 65.0% | |
| GACGGAGCAATGCCGCGTGG+AGG | - | chr7_1:65715726-65715745 | None:intergenic | 70.0% | |
| CCTGACGGAGCAATGCCGCG+TGG | - | chr7_1:65715729-65715748 | None:intergenic | 70.0% | |
| CCACGCGGCATTGCTCCGTC+AGG | + | chr7_1:65715726-65715745 | Msa1031230:intron | 70.0% | |
| TCCTACGGGAGGCAGCGGTG+GGG | - | chr7_1:65715774-65715793 | None:intergenic | 70.0% | |
| CTCCTACGGGAGGCAGCGGT+GGG | - | chr7_1:65715775-65715794 | None:intergenic | 70.0% | |
| ACTCCTACGGGAGGCAGCGG+TGG | - | chr7_1:65715776-65715795 | None:intergenic | 70.0% | |
| CGCTGCCTCCCGTAGGAGTC+TGG | + | chr7_1:65715777-65715796 | Msa1031230:intron | 70.0% | |
| GACGCGAGCCCCTCCTTGGA+CGG | + | chr7_1:65715893-65715912 | Msa1031230:intron | 70.0% | |
| TCCCCACCGCTGCCTCCCGT+AGG | + | chr7_1:65715770-65715789 | Msa1031230:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 65712789 | 65719538 | 65712789 | ID=Msa1031230;Name=Msa1031230 |
| chr7_1 | mRNA | 65712789 | 65719538 | 65712789 | ID=Msa1031230-mRNA-1;Parent=Msa1031230;Name=Msa1031230-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|124 |
| chr7_1 | exon | 65712789 | 65712932 | 65712789 | ID=Msa1031230-mRNA-1:exon:14654;Parent=Msa1031230-mRNA-1 |
| chr7_1 | exon | 65713961 | 65714083 | 65713961 | ID=Msa1031230-mRNA-1:exon:14655;Parent=Msa1031230-mRNA-1 |
| chr7_1 | exon | 65716640 | 65716741 | 65716640 | ID=Msa1031230-mRNA-1:exon:14656;Parent=Msa1031230-mRNA-1 |
| chr7_1 | exon | 65719533 | 65719538 | 65719533 | ID=Msa1031230-mRNA-1:exon:14657;Parent=Msa1031230-mRNA-1 |
| chr7_1 | CDS | 65712789 | 65712932 | 65712789 | ID=Msa1031230-mRNA-1:cds;Parent=Msa1031230-mRNA-1 |
| chr7_1 | CDS | 65713961 | 65714083 | 65713961 | ID=Msa1031230-mRNA-1:cds;Parent=Msa1031230-mRNA-1 |
| chr7_1 | CDS | 65716640 | 65716741 | 65716640 | ID=Msa1031230-mRNA-1:cds;Parent=Msa1031230-mRNA-1 |
| chr7_1 | CDS | 65719533 | 65719538 | 65719533 | ID=Msa1031230-mRNA-1:cds;Parent=Msa1031230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
