AlfalfaGEDB | Msa1466590

M. sativa cultivar zhongmu-4 / Msa1466590

KEGG: K05016
GO: GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0008150 GO:0009653 GO:0009826 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0031984 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0060560 GO:0071840 GO:0098791
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466590	KEH27344.1	100.000	84	0	0	1	84	1	84	1.66e-51	182

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466590	sp\|P92943\|CLCD_ARATH	61.176	85	28	3	1	84	1	81	1.75e-25	101

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466590	A0A072UC04	100.000	84	0	0	1	84	1	84	7.95e-52	182

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003220	Msa1466590	0.846165	2.578347e-59	-8.615850e-47
Msa0003270	Msa1466590	0.808925	2.437233e-50	-8.615850e-47
Msa0007970	Msa1466590	0.815600	8.505861e-52	-8.615850e-47
Msa0010770	Msa1466590	0.817773	2.771924e-52	-8.615850e-47
Msa0013540	Msa1466590	0.818150	2.277579e-52	-8.615850e-47
Msa0015120	Msa1466590	0.809986	1.442658e-50	-8.615850e-47
Msa0022750	Msa1466590	-0.824356	8.437101e-54	-8.615850e-47
Msa0027390	Msa1466590	0.831478	1.631540e-55	-8.615850e-47
Msa0031180	Msa1466590	0.829482	5.021195e-55	-8.615850e-47
Msa0032320	Msa1466590	0.813519	2.456564e-51	-8.615850e-47
Msa0032370	Msa1466590	0.818473	1.924508e-52	-8.615850e-47
Msa0037120	Msa1466590	0.835081	2.065566e-56	-8.615850e-47
Msa0039250	Msa1466590	0.835584	1.540965e-56	-8.615850e-47
Msa0041690	Msa1466590	0.833800	4.329813e-56	-8.615850e-47
Msa0045340	Msa1466590	0.809232	2.095001e-50	-8.615850e-47
Msa0054530	Msa1466590	0.852406	4.714665e-61	-8.615850e-47
Msa0054820	Msa1466590	0.839371	1.649022e-57	-8.615850e-47
Msa0056450	Msa1466590	0.835278	1.841499e-56	-8.615850e-47
Msa0061340	Msa1466590	0.813617	2.337387e-51	-8.615850e-47
Msa0064110	Msa1466590	0.805755	1.145091e-49	-8.615850e-47
Msa0064290	Msa1466590	0.804224	2.393184e-49	-8.615850e-47
Msa0064920	Msa1466590	0.849606	2.902935e-60	-8.615850e-47
Msa0065680	Msa1466590	-0.801403	9.155698e-49	-8.615850e-47
Msa0068430	Msa1466590	0.829968	3.824330e-55	-8.615850e-47
Msa0069330	Msa1466590	0.801661	8.104561e-49	-8.615850e-47
Msa0069600	Msa1466590	0.809859	1.536140e-50	-8.615850e-47
Msa0070370	Msa1466590	0.827764	1.306305e-54	-8.615850e-47
Msa0074750	Msa1466590	0.827015	1.975836e-54	-8.615850e-47
Msa0078060	Msa1466590	0.821312	4.317065e-53	-8.615850e-47
Msa0078480	Msa1466590	0.822634	2.132926e-53	-8.615850e-47
Msa0079400	Msa1466590	0.805603	1.232412e-49	-8.615850e-47
Msa0082440	Msa1466590	0.837299	5.641499e-57	-8.615850e-47
Msa0084340	Msa1466590	0.834257	3.327459e-56	-8.615850e-47
Msa0085370	Msa1466590	0.815614	8.445062e-52	-8.615850e-47
Msa0089980	Msa1466590	0.811042	8.532793e-51	-8.615850e-47
Msa0090010	Msa1466590	0.808193	3.492228e-50	-8.615850e-47
Msa0090660	Msa1466590	0.820085	8.261990e-53	-8.615850e-47
Msa0091780	Msa1466590	0.843907	1.049973e-58	-8.615850e-47
Msa0092440	Msa1466590	0.826094	3.275085e-54	-8.615850e-47
Msa0094130	Msa1466590	0.802062	6.704585e-49	-8.615850e-47
Msa0096580	Msa1466590	0.821176	4.639216e-53	-8.615850e-47
Msa0100160	Msa1466590	0.816887	4.386127e-52	-8.615850e-47
Msa0102270	Msa1466590	0.814048	1.878383e-51	-8.615850e-47
Msa0103180	Msa1466590	0.805883	1.076349e-49	-8.615850e-47
Msa0115090	Msa1466590	0.810155	1.326314e-50	-8.615850e-47
Msa0116790	Msa1466590	0.824637	7.246897e-54	-8.615850e-47
Msa0117910	Msa1466590	0.834667	2.625161e-56	-8.615850e-47
Msa0119320	Msa1466590	0.810360	1.198410e-50	-8.615850e-47
Msa1348360	Msa1466590	0.832464	9.313264e-56	-8.615850e-47
Msa1359560	Msa1466590	0.801255	9.815430e-49	-8.615850e-47
Msa1364430	Msa1466590	0.818788	1.632743e-52	-8.615850e-47
Msa1377290	Msa1466590	0.802704	4.944447e-49	-8.615850e-47
Msa1377800	Msa1466590	0.818526	1.871880e-52	-8.615850e-47
Msa1393800	Msa1466590	0.840308	9.402329e-58	-8.615850e-47
Msa1393820	Msa1466590	0.813649	2.300175e-51	-8.615850e-47
Msa1401460	Msa1466590	0.807260	5.512432e-50	-8.615850e-47
Msa1402270	Msa1466590	0.814310	1.644422e-51	-8.615850e-47
Msa1409950	Msa1466590	0.802667	5.031868e-49	-8.615850e-47
Msa1411950	Msa1466590	0.808646	2.795654e-50	-8.615850e-47
Msa1416260	Msa1466590	0.800462	1.425106e-48	-8.615850e-47
Msa1418260	Msa1466590	0.830458	2.904259e-55	-8.615850e-47
Msa1420250	Msa1466590	0.882656	8.673630e-71	-8.615850e-47
Msa1424780	Msa1466590	0.806857	6.709399e-50	-8.615850e-47
Msa1426350	Msa1466590	0.809120	2.213749e-50	-8.615850e-47
Msa1426910	Msa1466590	0.860263	2.333030e-63	-8.615850e-47
Msa1433220	Msa1466590	0.819388	1.192461e-52	-8.615850e-47
Msa1435260	Msa1466590	0.846162	2.583039e-59	-8.615850e-47
Msa1438520	Msa1466590	0.809004	2.343966e-50	-8.615850e-47
Msa1439610	Msa1466590	0.819435	1.163514e-52	-8.615850e-47
Msa1439710	Msa1466590	0.814811	1.273538e-51	-8.615850e-47
Msa1449520	Msa1466590	0.802067	6.688520e-49	-8.615850e-47
Msa1450720	Msa1466590	0.807599	4.673060e-50	-8.615850e-47
Msa1454960	Msa1466590	0.817612	3.012888e-52	-8.615850e-47
Msa1462660	Msa1466590	0.800306	1.533361e-48	-8.615850e-47
Msa1462930	Msa1466590	0.816461	5.463722e-52	-8.615850e-47
Msa1463010	Msa1466590	0.816131	6.476800e-52	-8.615850e-47
Msa1463470	Msa1466590	0.823981	1.033482e-53	-8.615850e-47
Msa1464290	Msa1466590	0.811067	8.428265e-51	-8.615850e-47
Msa1466460	Msa1466590	0.809124	2.209596e-50	-8.615850e-47
Msa1466590	Msa1467000	0.869194	3.716749e-66	-8.615850e-47
Msa0606740	Msa1466590	0.853535	2.241770e-61	-8.615850e-47
Msa0621650	Msa1466590	0.819283	1.260095e-52	-8.615850e-47
Msa0626220	Msa1466590	0.859186	4.923780e-63	-8.615850e-47
Msa0626270	Msa1466590	0.800851	1.186841e-48	-8.615850e-47
Msa0626280	Msa1466590	0.808498	3.006994e-50	-8.615850e-47
Msa0628420	Msa1466590	0.802006	6.885904e-49	-8.615850e-47
Msa0628500	Msa1466590	0.838423	2.901322e-57	-8.615850e-47
Msa0640940	Msa1466590	0.800051	1.727841e-48	-8.615850e-47
Msa0641730	Msa1466590	0.811333	7.376967e-51	-8.615850e-47
Msa0645170	Msa1466590	0.809769	1.606437e-50	-8.615850e-47
Msa0646330	Msa1466590	0.803915	2.775038e-49	-8.615850e-47
Msa0647430	Msa1466590	0.803939	2.743258e-49	-8.615850e-47
Msa0657750	Msa1466590	0.831386	1.719333e-55	-8.615850e-47
Msa0661320	Msa1466590	0.819245	1.285462e-52	-8.615850e-47
Msa0663250	Msa1466590	0.840798	6.999800e-58	-8.615850e-47
Msa0679100	Msa1466590	0.808153	3.561496e-50	-8.615850e-47
Msa0682550	Msa1466590	0.809650	1.704147e-50	-8.615850e-47
Msa0685750	Msa1466590	0.810172	1.315603e-50	-8.615850e-47
Msa0687450	Msa1466590	0.854817	9.559477e-62	-8.615850e-47
Msa0689420	Msa1466590	0.835937	1.254407e-56	-8.615850e-47
Msa0689760	Msa1466590	0.883017	6.400995e-71	-8.615850e-47
Msa0697720	Msa1466590	0.800599	1.336079e-48	-8.615850e-47
Msa0702350	Msa1466590	0.809097	2.238788e-50	-8.615850e-47
Msa0702570	Msa1466590	0.838531	2.721520e-57	-8.615850e-47
Msa0705390	Msa1466590	0.803601	3.225744e-49	-8.615850e-47
Msa0711130	Msa1466590	0.810305	1.231286e-50	-8.615850e-47
Msa0716860	Msa1466590	0.871679	5.688758e-67	-8.615850e-47
Msa0740640	Msa1466590	0.807701	4.444314e-50	-8.615850e-47
Msa0743530	Msa1466590	0.809192	2.136271e-50	-8.615850e-47
Msa0749400	Msa1466590	0.869430	3.114589e-66	-8.615850e-47
Msa0756530	Msa1466590	0.830774	2.430231e-55	-8.615850e-47
Msa0757800	Msa1466590	0.858780	6.510930e-63	-8.615850e-47
Msa0760770	Msa1466590	0.800931	1.143326e-48	-8.615850e-47
Msa0763400	Msa1466590	0.809337	1.988642e-50	-8.615850e-47
Msa0766580	Msa1466590	0.808423	3.120449e-50	-8.615850e-47
Msa0767100	Msa1466590	0.839646	1.398741e-57	-8.615850e-47
Msa0779550	Msa1466590	0.801649	8.149629e-49	-8.615850e-47
Msa0780280	Msa1466590	0.836545	8.788790e-57	-8.615850e-47
Msa0789560	Msa1466590	0.817788	2.749001e-52	-8.615850e-47
Msa0795660	Msa1466590	0.804474	2.123604e-49	-8.615850e-47
Msa0800700	Msa1466590	0.841831	3.741957e-58	-8.615850e-47
Msa0805430	Msa1466590	0.804632	1.968394e-49	-8.615850e-47
Msa0820890	Msa1466590	0.825579	4.341253e-54	-8.615850e-47
Msa0821800	Msa1466590	0.827400	1.597823e-54	-8.615850e-47
Msa0828920	Msa1466590	0.844770	6.154179e-59	-8.615850e-47
Msa0829190	Msa1466590	0.809627	1.722967e-50	-8.615850e-47
Msa0832090	Msa1466590	0.843844	1.091541e-58	-8.615850e-47
Msa0126230	Msa1466590	0.881798	1.779105e-70	-8.615850e-47
Msa0131290	Msa1466590	0.815276	1.004291e-51	-8.615850e-47
Msa0131700	Msa1466590	0.807986	3.865494e-50	-8.615850e-47
Msa0133720	Msa1466590	0.838074	3.568252e-57	-8.615850e-47
Msa0133820	Msa1466590	0.842209	2.972851e-58	-8.615850e-47
Msa0138210	Msa1466590	0.834735	2.523420e-56	-8.615850e-47
Msa0138950	Msa1466590	0.811550	6.619926e-51	-8.615850e-47
Msa0139700	Msa1466590	0.801112	1.050141e-48	-8.615850e-47
Msa0143850	Msa1466590	0.825899	3.644006e-54	-8.615850e-47
Msa0144360	Msa1466590	0.821940	3.089974e-53	-8.615850e-47
Msa0144780	Msa1466590	0.805340	1.399619e-49	-8.615850e-47
Msa0144790	Msa1466590	0.803143	4.012081e-49	-8.615850e-47
Msa0152400	Msa1466590	0.827532	1.485684e-54	-8.615850e-47
Msa0155330	Msa1466590	0.803004	4.287343e-49	-8.615850e-47
Msa0160670	Msa1466590	0.830037	3.679633e-55	-8.615850e-47
Msa0165300	Msa1466590	0.834821	2.401431e-56	-8.615850e-47
Msa0174360	Msa1466590	0.806465	8.119433e-50	-8.615850e-47
Msa0177170	Msa1466590	0.839569	1.465164e-57	-8.615850e-47
Msa0179000	Msa1466590	0.804527	2.070243e-49	-8.615850e-47
Msa0183420	Msa1466590	0.831645	1.484429e-55	-8.615850e-47
Msa0200560	Msa1466590	0.820746	5.828907e-53	-8.615850e-47
Msa0211160	Msa1466590	0.800597	1.337858e-48	-8.615850e-47
Msa0218350	Msa1466590	0.820306	7.353547e-53	-8.615850e-47
Msa0227230	Msa1466590	0.810099	1.364201e-50	-8.615850e-47
Msa0230370	Msa1466590	0.800353	1.499859e-48	-8.615850e-47
Msa0236770	Msa1466590	0.814279	1.670273e-51	-8.615850e-47
Msa0237200	Msa1466590	0.803113	4.070608e-49	-8.615850e-47
Msa0237310	Msa1466590	0.819195	1.319196e-52	-8.615850e-47
Msa1224830	Msa1466590	0.843736	1.166729e-58	-8.615850e-47
Msa1227320	Msa1466590	0.802296	6.001101e-49	-8.615850e-47
Msa1244640	Msa1466590	0.810233	1.276243e-50	-8.615850e-47
Msa1253450	Msa1466590	0.817132	3.864606e-52	-8.615850e-47
Msa1254620	Msa1466590	0.824762	6.772455e-54	-8.615850e-47
Msa1259640	Msa1466590	0.870037	1.973972e-66	-8.615850e-47
Msa1276660	Msa1466590	0.800181	1.625924e-48	-8.615850e-47
Msa1280560	Msa1466590	0.802088	6.623488e-49	-8.615850e-47
Msa1282500	Msa1466590	0.841685	4.091500e-58	-8.615850e-47
Msa1286570	Msa1466590	0.820710	5.940597e-53	-8.615850e-47
Msa1296300	Msa1466590	0.821126	4.766295e-53	-8.615850e-47
Msa1299330	Msa1466590	0.828335	9.521213e-55	-8.615850e-47
Msa1307550	Msa1466590	0.826151	3.174824e-54	-8.615850e-47
Msa1320820	Msa1466590	0.804595	2.003328e-49	-8.615850e-47
Msa1328640	Msa1466590	0.806928	6.482426e-50	-8.615850e-47
Msa1329450	Msa1466590	0.816587	5.122299e-52	-8.615850e-47
Msa1329790	Msa1466590	0.871043	9.226992e-67	-8.615850e-47
Msa1332000	Msa1466590	0.811366	7.256936e-51	-8.615850e-47
Msa1333730	Msa1466590	0.839445	1.578144e-57	-8.615850e-47
Msa1336040	Msa1466590	0.818636	1.767765e-52	-8.615850e-47
Msa1338250	Msa1466590	0.870372	1.533984e-66	-8.615850e-47
Msa1338830	Msa1466590	0.804639	1.961104e-49	-8.615850e-47
Msa1340810	Msa1466590	0.803550	3.303759e-49	-8.615850e-47
Msa0365370	Msa1466590	0.808745	2.663175e-50	-8.615850e-47
Msa0377440	Msa1466590	0.812037	5.186050e-51	-8.615850e-47
Msa0379610	Msa1466590	0.813674	2.270828e-51	-8.615850e-47
Msa0381000	Msa1466590	0.821133	4.746471e-53	-8.615850e-47
Msa0381080	Msa1466590	0.814346	1.614177e-51	-8.615850e-47
Msa0382260	Msa1466590	0.808746	2.661715e-50	-8.615850e-47
Msa0382870	Msa1466590	0.803032	4.230838e-49	-8.615850e-47
Msa0387050	Msa1466590	0.803484	3.409925e-49	-8.615850e-47
Msa0387250	Msa1466590	0.856620	2.844673e-62	-8.615850e-47
Msa0387950	Msa1466590	0.811364	7.263680e-51	-8.615850e-47
Msa0388220	Msa1466590	0.823498	1.341180e-53	-8.615850e-47
Msa0390960	Msa1466590	0.828607	8.183428e-55	-8.615850e-47
Msa0392200	Msa1466590	0.802923	4.454653e-49	-8.615850e-47
Msa0394690	Msa1466590	0.834253	3.335989e-56	-8.615850e-47
Msa0395980	Msa1466590	0.821483	3.941993e-53	-8.615850e-47
Msa0398240	Msa1466590	0.804629	1.971277e-49	-8.615850e-47
Msa0410300	Msa1466590	0.800476	1.415759e-48	-8.615850e-47
Msa0410840	Msa1466590	0.813639	2.312019e-51	-8.615850e-47
Msa0410870	Msa1466590	0.824138	9.492809e-54	-8.615850e-47
Msa0411410	Msa1466590	0.835309	1.808563e-56	-8.615850e-47
Msa0417650	Msa1466590	0.818749	1.665838e-52	-8.615850e-47
Msa0417730	Msa1466590	0.808855	2.522335e-50	-8.615850e-47
Msa0423840	Msa1466590	0.862149	6.214958e-64	-8.615850e-47
Msa0430870	Msa1466590	0.838297	3.126756e-57	-8.615850e-47
Msa0430950	Msa1466590	0.821875	3.198904e-53	-8.615850e-47
Msa0431410	Msa1466590	0.806362	8.536536e-50	-8.615850e-47
Msa0431770	Msa1466590	0.800456	1.429186e-48	-8.615850e-47
Msa0432070	Msa1466590	0.800520	1.387080e-48	-8.615850e-47
Msa0432170	Msa1466590	0.816610	5.060098e-52	-8.615850e-47
Msa0432480	Msa1466590	0.804253	2.360705e-49	-8.615850e-47
Msa0432930	Msa1466590	0.801614	8.285722e-49	-8.615850e-47
Msa0433610	Msa1466590	0.809766	1.609146e-50	-8.615850e-47
Msa0438590	Msa1466590	0.815106	1.095480e-51	-8.615850e-47
Msa0439970	Msa1466590	0.825709	4.042743e-54	-8.615850e-47
Msa0446900	Msa1466590	0.841270	5.261730e-58	-8.615850e-47
Msa0450360	Msa1466590	0.817288	3.564995e-52	-8.615850e-47
Msa0452960	Msa1466590	0.808363	3.213148e-50	-8.615850e-47
Msa0468250	Msa1466590	0.819830	9.448967e-53	-8.615850e-47
Msa0468800	Msa1466590	0.806023	1.005819e-49	-8.615850e-47
Msa0473330	Msa1466590	0.803241	3.828721e-49	-8.615850e-47
Msa0473980	Msa1466590	0.826834	2.182235e-54	-8.615850e-47
Msa0981310	Msa1466590	0.832742	7.946434e-56	-8.615850e-47
Msa0996020	Msa1466590	0.831793	1.364610e-55	-8.615850e-47
Msa0998590	Msa1466590	0.843092	1.732971e-58	-8.615850e-47
Msa1004420	Msa1466590	0.827864	1.235893e-54	-8.615850e-47
Msa1010070	Msa1466590	0.845692	3.466552e-59	-8.615850e-47
Msa1020940	Msa1466590	0.814844	1.252378e-51	-8.615850e-47
Msa1031230	Msa1466590	0.803344	3.645463e-49	-8.615850e-47
Msa1032170	Msa1466590	0.805137	1.543773e-49	-8.615850e-47
Msa1036410	Msa1466590	0.806191	9.272386e-50	-8.615850e-47
Msa1036740	Msa1466590	0.829709	4.423983e-55	-8.615850e-47
Msa1040520	Msa1466590	0.803807	2.922229e-49	-8.615850e-47
Msa1050910	Msa1466590	0.820930	5.286796e-53	-8.615850e-47
Msa1050960	Msa1466590	0.815455	9.162112e-52	-8.615850e-47
Msa1051600	Msa1466590	0.832243	1.056544e-55	-8.615850e-47
Msa1056460	Msa1466590	0.823312	1.481987e-53	-8.615850e-47
Msa1067140	Msa1466590	0.831160	1.953460e-55	-8.615850e-47
Msa1072600	Msa1466590	0.832510	9.071618e-56	-8.615850e-47
Msa1072700	Msa1466590	0.828736	7.615498e-55	-8.615850e-47
Msa1077070	Msa1466590	0.827979	1.159600e-54	-8.615850e-47
Msa1079860	Msa1466590	0.828464	8.861564e-55	-8.615850e-47
Msa1095790	Msa1466590	0.845691	3.468217e-59	-8.615850e-47
Msa1096210	Msa1466590	0.802067	6.689759e-49	-8.615850e-47
Msa1098890	Msa1466590	0.835440	1.676180e-56	-8.615850e-47
Msa0243250	Msa1466590	0.802863	4.585389e-49	-8.615850e-47
Msa0248520	Msa1466590	0.804979	1.665132e-49	-8.615850e-47
Msa0249100	Msa1466590	0.809111	2.224025e-50	-8.615850e-47
Msa0251270	Msa1466590	0.819947	8.886606e-53	-8.615850e-47
Msa0251770	Msa1466590	0.808808	2.581546e-50	-8.615850e-47
Msa0253290	Msa1466590	0.805606	1.230904e-49	-8.615850e-47
Msa0269520	Msa1466590	0.833581	4.911613e-56	-8.615850e-47
Msa0274730	Msa1466590	0.816762	4.679732e-52	-8.615850e-47
Msa0277420	Msa1466590	0.804254	2.359271e-49	-8.615850e-47
Msa0279390	Msa1466590	0.827836	1.255288e-54	-8.615850e-47
Msa0281360	Msa1466590	0.846074	2.728926e-59	-8.615850e-47
Msa0301810	Msa1466590	0.826429	2.726587e-54	-8.615850e-47
Msa0302890	Msa1466590	0.821610	3.683650e-53	-8.615850e-47
Msa0304100	Msa1466590	0.816057	6.729764e-52	-8.615850e-47
Msa0305330	Msa1466590	0.818299	2.108065e-52	-8.615850e-47
Msa0310430	Msa1466590	0.803116	4.064473e-49	-8.615850e-47
Msa0315530	Msa1466590	0.811081	8.367215e-51	-8.615850e-47
Msa0317740	Msa1466590	0.810374	1.190140e-50	-8.615850e-47
Msa0318880	Msa1466590	0.843172	1.650156e-58	-8.615850e-47
Msa0320800	Msa1466590	0.815846	7.500224e-52	-8.615850e-47
Msa0322590	Msa1466590	0.813957	1.967644e-51	-8.615850e-47
Msa0325850	Msa1466590	0.800974	1.120525e-48	-8.615850e-47
Msa0333160	Msa1466590	0.805326	1.409059e-49	-8.615850e-47
Msa0333920	Msa1466590	0.806796	6.912321e-50	-8.615850e-47
Msa0334040	Msa1466590	0.801079	1.066266e-48	-8.615850e-47
Msa0342010	Msa1466590	0.808725	2.689681e-50	-8.615850e-47
Msa0343300	Msa1466590	0.846931	1.592282e-59	-8.615850e-47
Msa0347950	Msa1466590	0.814632	1.395594e-51	-8.615850e-47
Msa0347990	Msa1466590	0.818628	1.774798e-52	-8.615850e-47
Msa0351260	Msa1466590	0.800798	1.216967e-48	-8.615850e-47
Msa0358400	Msa1466590	0.841607	4.288068e-58	-8.615850e-47
Msa0363400	Msa1466590	0.823694	1.206876e-53	-8.615850e-47
Msa0363810	Msa1466590	0.820357	7.157040e-53	-8.615850e-47
Msa1113590	Msa1466590	0.833895	4.099722e-56	-8.615850e-47
Msa1122780	Msa1466590	0.836068	1.161980e-56	-8.615850e-47
Msa1127430	Msa1466590	0.811457	6.933400e-51	-8.615850e-47
Msa1127770	Msa1466590	0.803195	3.913589e-49	-8.615850e-47
Msa1140590	Msa1466590	0.800210	1.604056e-48	-8.615850e-47
Msa1144750	Msa1466590	0.807919	3.994086e-50	-8.615850e-47
Msa1152950	Msa1466590	0.841202	5.482635e-58	-8.615850e-47
Msa1163870	Msa1466590	0.800096	1.691848e-48	-8.615850e-47
Msa1176270	Msa1466590	0.808826	2.558650e-50	-8.615850e-47
Msa1179940	Msa1466590	0.819801	9.598165e-53	-8.615850e-47
Msa1179970	Msa1466590	0.822208	2.679158e-53	-8.615850e-47
Msa1181170	Msa1466590	-0.810688	1.017639e-50	-8.615850e-47
Msa1182770	Msa1466590	0.817333	3.482197e-52	-8.615850e-47
Msa1185130	Msa1466590	0.806598	7.608973e-50	-8.615850e-47
Msa1190970	Msa1466590	0.812795	3.541594e-51	-8.615850e-47
Msa1199290	Msa1466590	0.802093	6.608158e-49	-8.615850e-47
Msa1201640	Msa1466590	0.833940	3.995878e-56	-8.615850e-47
Msa1204730	Msa1466590	0.817863	2.644645e-52	-8.615850e-47
Msa1205370	Msa1466590	0.800369	1.488322e-48	-8.615850e-47
Msa1205480	Msa1466590	0.818349	2.053372e-52	-8.615850e-47
Msa1211340	Msa1466590	0.871037	9.271472e-67	-8.615850e-47
Msa1215070	Msa1466590	0.825493	4.547931e-54	-8.615850e-47
Msa1217670	Msa1466590	0.802515	5.409197e-49	-8.615850e-47
Msa0483740	Msa1466590	0.846679	1.866351e-59	-8.615850e-47
Msa0491000	Msa1466590	0.803903	2.791911e-49	-8.615850e-47
Msa0510290	Msa1466590	0.856815	2.492728e-62	-8.615850e-47
Msa0512870	Msa1466590	0.817687	2.897433e-52	-8.615850e-47
Msa0516120	Msa1466590	0.815142	1.075566e-51	-8.615850e-47
Msa0517090	Msa1466590	0.804735	1.873156e-49	-8.615850e-47
Msa0517650	Msa1466590	0.814115	1.815572e-51	-8.615850e-47
Msa0518960	Msa1466590	0.850752	1.385394e-60	-8.615850e-47
Msa0531250	Msa1466590	0.808822	2.564381e-50	-8.615850e-47
Msa0537770	Msa1466590	0.821945	3.081975e-53	-8.615850e-47
Msa0553200	Msa1466590	0.807029	6.172095e-50	-8.615850e-47
Msa0574390	Msa1466590	0.808311	3.296043e-50	-8.615850e-47
Msa0576680	Msa1466590	0.852708	3.866754e-61	-8.615850e-47
Msa0580640	Msa1466590	0.806503	7.970935e-50	-8.615850e-47
Msa0585920	Msa1466590	0.806682	7.306206e-50	-8.615850e-47
Msa0588120	Msa1466590	0.817263	3.610209e-52	-8.615850e-47
Msa0592180	Msa1466590	0.804347	2.256094e-49	-8.615850e-47
Msa0594200	Msa1466590	0.813328	2.706585e-51	-8.615850e-47
Msa0844390	Msa1466590	0.804839	1.781256e-49	-8.615850e-47
Msa0846140	Msa1466590	0.807632	4.596985e-50	-8.615850e-47
Msa0861830	Msa1466590	0.834042	3.767756e-56	-8.615850e-47
Msa0868160	Msa1466590	0.820327	7.272853e-53	-8.615850e-47
Msa0869010	Msa1466590	0.804812	1.805016e-49	-8.615850e-47
Msa0873860	Msa1466590	0.812959	3.260316e-51	-8.615850e-47
Msa0896240	Msa1466590	0.815077	1.111833e-51	-8.615850e-47
Msa0898660	Msa1466590	0.850645	1.484816e-60	-8.615850e-47
Msa0908050	Msa1466590	0.812298	4.548051e-51	-8.615850e-47
Msa0909010	Msa1466590	0.804786	1.827348e-49	-8.615850e-47
Msa0926670	Msa1466590	0.829791	4.224813e-55	-8.615850e-47
Msa0933450	Msa1466590	0.807654	4.548349e-50	-8.615850e-47
Msa0937430	Msa1466590	0.820630	6.195512e-53	-8.615850e-47
Msa0944660	Msa1466590	0.804395	2.204727e-49	-8.615850e-47
Msa0969330	Msa1466590	0.832353	9.922130e-56	-8.615850e-47
Msa0970990	Msa1466590	0.801865	7.358721e-49	-8.615850e-47
Msa0975940	Msa1466590	0.808800	2.591717e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466590	MtrunA17_Chr5g0394301	100.000	84	0	0	1	84	1	84	1.79e-55	182

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466590	AT5G26240.2	61.176	85	28	3	1	84	1	81	1.66e-26	101
Msa1466590	AT5G26240.1	61.176	85	28	3	1	84	1	81	1.78e-26	101

Find 26 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTCGATGATGACGGCGTT+GGG	0.366873	tig0047679:+718	Msa1466590:CDS
TTTCACCACCCGCACATGTT+TGG	0.374368	tig0047679:+411	Msa1466590:five_prime_UTR
GCTGTATGTGAGTTACTTGC+TGG	0.459222	tig0047679:+954	Msa1466590:CDS
CGTTTGGATTAAGTTGTGTT+TGG	0.471687	tig0047679:-560	Msa1466590:intergenic
CATAAGATTAGAAACTCTTA+AGG	0.471949	tig0047679:+363	Msa1466590:five_prime_UTR
GTCCTCGATGATGACGGCGT+TGG	0.474922	tig0047679:+717	Msa1466590:CDS
GTTACTTGCTGGTGGTGAAA+TGG	0.478899	tig0047679:+965	Msa1466590:CDS
AAAGGTGATTCATCGGAGTT+CGG	0.503410	tig0047679:-693	Msa1466590:intergenic
CAGCATCGTCGTTGGTCGAT+CGG	0.515921	tig0047679:-616	Msa1466590:intergenic
CGAACGAACGACACTGTTAG+TGG	0.517956	tig0047679:+495	Msa1466590:five_prime_UTR
CTGTCGAATCATATTCAAAA+CGG	0.522595	tig0047679:+636	Msa1466590:CDS
TCGAATCTGCGAGACTCGCT+TGG	0.526282	tig0047679:+661	Msa1466590:CDS
TTGAGGTTCCAAACATGTGC+GGG	0.543848	tig0047679:-419	Msa1466590:intergenic
ACACTGTTAGTGGTGGATAG+AGG	0.548071	tig0047679:+505	Msa1466590:five_prime_UTR
TGATTCGACAGCATCGTCGT+TGG	0.579753	tig0047679:-624	Msa1466590:intergenic
CCGTCATCATCGAGGACGAA+AGG	0.595112	tig0047679:-711	Msa1466590:intergenic
TTCATAGTCAAGACTCTCAA+CGG	0.598773	tig0047679:-766	Msa1466590:intergenic
CAGAATGAAAGAAAGAATTG+AGG	0.606881	tig0047679:-436	Msa1466590:intergenic
CCTTTCGTCCTCGATGATGA+CGG	0.613284	tig0047679:+711	Msa1466590:CDS
GAGGACGAAAGGTGATTCAT+CGG	0.613288	tig0047679:-700	Msa1466590:intergenic
GTATGTGAGTTACTTGCTGG+TGG	0.618042	tig0047679:+957	Msa1466590:CDS
GGGATTCTTAAGAAGAACGA+TGG	0.624518	tig0047679:+738	Msa1466590:CDS
ATTGAGGTTCCAAACATGTG+CGG	0.657226	tig0047679:-420	Msa1466590:intergenic
ACGAACGACACTGTTAGTGG+TGG	0.665127	tig0047679:+498	Msa1466590:five_prime_UTR
TCCCAACGCCGTCATCATCG+AGG	0.707360	tig0047679:-719	Msa1466580:intergenic
AGGTTCCAAACATGTGCGGG+TGG	0.707945	tig0047679:-416	Msa1466580:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATTATTGTTCAATGATAT+TGG	+	tig0047679:893-912	Msa1466590:intron	15.0%
!	CATAAGATTAGAAACTCTTA+AGG	+	tig0047679:363-382	Msa1466590:five_prime_UTR	25.0%
!!!	TAGATTCTCATTTTGAGTTT+TGG	+	tig0047679:591-610	Msa1466590:five_prime_UTR	25.0%
!!!	GAGTTTGTTTTGTGATTTTT+AGG	+	tig0047679:915-934	Msa1466590:intron	25.0%
	CAGAATGAAAGAAAGAATTG+AGG	-	tig0047679:439-458	Msa1466590:intergenic	30.0%
!	AGAATCTAAAAAAGTGCGTT+TGG	-	tig0047679:579-598	Msa1466590:intergenic	30.0%
	CTGTCGAATCATATTCAAAA+CGG	+	tig0047679:636-655	Msa1466590:CDS	30.0%
!!!	GGAACAGGTTTAGTTTTTTT+TGG	+	tig0047679:815-834	Msa1466590:intron	30.0%
!	CGTTTGGATTAAGTTGTGTT+TGG	-	tig0047679:563-582	Msa1466590:intergenic	35.0%
	TTCATAGTCAAGACTCTCAA+CGG	-	tig0047679:769-788	Msa1466590:intergenic	35.0%
!	TGAGAATTTTGCTTATCGAG+AGG	+	tig0047679:794-813	Msa1466590:CDS	35.0%
!!	ATTTTTAGGCGCATAGAAGA+AGG	+	tig0047679:929-948	Msa1466590:intron	35.0%
!!	GATCGTTTTTCTTGTTGACG+TGG	-	tig0047679:391-410	Msa1466590:intergenic	40.0%
	ATTGAGGTTCCAAACATGTG+CGG	-	tig0047679:423-442	Msa1466590:intergenic	40.0%
	AAAGGTGATTCATCGGAGTT+CGG	-	tig0047679:696-715	Msa1466590:intergenic	40.0%
	GGGATTCTTAAGAAGAACGA+TGG	+	tig0047679:738-757	Msa1466590:CDS	40.0%
!	TTTTGCTTATCGAGAGGAAC+AGG	+	tig0047679:800-819	Msa1466590:CDS	40.0%
	TTGAGGTTCCAAACATGTGC+GGG	-	tig0047679:422-441	Msa1466590:intergenic	45.0%
!!	ACACTGTTAGTGGTGGATAG+AGG	+	tig0047679:505-524	Msa1466590:five_prime_UTR	45.0%
	GAGGACGAAAGGTGATTCAT+CGG	-	tig0047679:703-722	Msa1466590:intergenic	45.0%
	GCTGTATGTGAGTTACTTGC+TGG	+	tig0047679:954-973	Msa1466590:CDS	45.0%
!	GTATGTGAGTTACTTGCTGG+TGG	+	tig0047679:957-976	Msa1466590:CDS	45.0%
!	GTTACTTGCTGGTGGTGAAA+TGG	+	tig0047679:965-984	Msa1466590:CDS	45.0%
	TTTCACCACCCGCACATGTT+TGG	+	tig0047679:411-430	Msa1466590:five_prime_UTR	50.0%
	CGAACGAACGACACTGTTAG+TGG	+	tig0047679:495-514	Msa1466590:five_prime_UTR	50.0%
	ACGAACGACACTGTTAGTGG+TGG	+	tig0047679:498-517	Msa1466590:five_prime_UTR	50.0%
	TGATTCGACAGCATCGTCGT+TGG	-	tig0047679:627-646	Msa1466590:intergenic	50.0%
	CCTTTCGTCCTCGATGATGA+CGG	+	tig0047679:711-730	Msa1466590:CDS	50.0%
	AGGTTCCAAACATGTGCGGG+TGG	-	tig0047679:419-438	Msa1466590:intergenic	55.0%
	CAGCATCGTCGTTGGTCGAT+CGG	-	tig0047679:619-638	Msa1466590:intergenic	55.0%
	TCGAATCTGCGAGACTCGCT+TGG	+	tig0047679:661-680	Msa1466590:CDS	55.0%
	CCGTCATCATCGAGGACGAA+AGG	-	tig0047679:714-733	Msa1466590:intergenic	55.0%
!!	TCCTCGATGATGACGGCGTT+GGG	+	tig0047679:718-737	Msa1466590:CDS	55.0%
	CTGCGAGACTCGCTTGGTCA+CGG	+	tig0047679:667-686	Msa1466590:CDS	60.0%
!!	GTCCTCGATGATGACGGCGT+TGG	+	tig0047679:717-736	Msa1466590:CDS	60.0%
	TCCCAACGCCGTCATCATCG+AGG	-	tig0047679:722-741	Msa1466590:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0047679	gene	358	999	358	ID=Msa1466590;Name=Msa1466590
tig0047679	mRNA	358	999	358	ID=Msa1466590-mRNA-1;Parent=Msa1466590;Name=Msa1466590-mRNA-1;_AED=0.00;_eAED=0.00;_QI=275\|1\|0.5\|1\|1\|1\|2\|0\|84
tig0047679	exon	358	821	358	ID=Msa1466590-mRNA-1:exon:25101;Parent=Msa1466590-mRNA-1
tig0047679	exon	937	999	937	ID=Msa1466590-mRNA-1:exon:25102;Parent=Msa1466590-mRNA-1
tig0047679	five_prime_UTR	358	632	358	ID=Msa1466590-mRNA-1:five_prime_utr;Parent=Msa1466590-mRNA-1
tig0047679	CDS	633	821	633	ID=Msa1466590-mRNA-1:cds;Parent=Msa1466590-mRNA-1
tig0047679	CDS	937	999	937	ID=Msa1466590-mRNA-1:cds;Parent=Msa1466590-mRNA-1

Gene Sequence	>Msa1466590 ATGCTGTCGAATCATATTCAAAACGGCATCGAATCTGCGAGACTCGCTTGGTCACGGATTCCGAACTCCGATGAATCACCTTTCGTCCTCGATGATGACGGCGTTGGGATTCTTAAGAAGAACGATGGAAGCGCCGTTGAGAGTCTTGACTATGAAGTCATTGAGAATTTTGCTTATCGAGAGGAACAGGCGCATAGAAGAAGGAAGCTGTATGTGAGTTACTTGCTGGTGGTGAAATGGTTCTTTGCATTG
Protein sequence	>Msa1466590 MLSNHIQNGIESARLAWSRIPNSDESPFVLDDDGVGILKKNDGSAVESLDYEVIENFAYREEQAHRRRKLYVSYLLVVKWFFAL