Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388220 | XP_013451607.1 | 96.809 | 188 | 6 | 0 | 1 | 188 | 1 | 188 | 4.62e-126 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388220 | A0A072UII6 | 96.809 | 188 | 6 | 0 | 1 | 188 | 1 | 188 | 2.20e-126 | 388 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003050 | Msa0388220 | 0.802728 | 4.887940e-49 | -8.615850e-47 |
| Msa0010770 | Msa0388220 | 0.819816 | 9.521043e-53 | -8.615850e-47 |
| Msa0022750 | Msa0388220 | -0.806043 | 9.960393e-50 | -8.615850e-47 |
| Msa0027390 | Msa0388220 | 0.832894 | 7.284467e-56 | -8.615850e-47 |
| Msa0031180 | Msa0388220 | 0.814253 | 1.692805e-51 | -8.615850e-47 |
| Msa0037120 | Msa0388220 | 0.809081 | 2.256291e-50 | -8.615850e-47 |
| Msa0054820 | Msa0388220 | 0.810229 | 1.278814e-50 | -8.615850e-47 |
| Msa0055660 | Msa0388220 | 0.806596 | 7.617782e-50 | -8.615850e-47 |
| Msa0056450 | Msa0388220 | 0.813227 | 2.848486e-51 | -8.615850e-47 |
| Msa0064110 | Msa0388220 | 0.842920 | 1.926138e-58 | -8.615850e-47 |
| Msa0064920 | Msa0388220 | 0.822703 | 2.055886e-53 | -8.615850e-47 |
| Msa0076700 | Msa0388220 | 0.826675 | 2.381930e-54 | -8.615850e-47 |
| Msa0078060 | Msa0388220 | 0.822441 | 2.364400e-53 | -8.615850e-47 |
| Msa0078480 | Msa0388220 | 0.820975 | 5.161139e-53 | -8.615850e-47 |
| Msa0082440 | Msa0388220 | 0.803879 | 2.823912e-49 | -8.615850e-47 |
| Msa0084340 | Msa0388220 | 0.809632 | 1.718930e-50 | -8.615850e-47 |
| Msa0091780 | Msa0388220 | 0.819095 | 1.390278e-52 | -8.615850e-47 |
| Msa0092440 | Msa0388220 | 0.869590 | 2.763436e-66 | -8.615850e-47 |
| Msa0096580 | Msa0388220 | 0.806818 | 6.838027e-50 | -8.615850e-47 |
| Msa0100160 | Msa0388220 | 0.807904 | 4.023692e-50 | -8.615850e-47 |
| Msa0117910 | Msa0388220 | 0.808806 | 2.584177e-50 | -8.615850e-47 |
| Msa0119320 | Msa0388220 | 0.812875 | 3.401471e-51 | -8.615850e-47 |
| Msa0126230 | Msa0388220 | 0.851215 | 1.026368e-60 | -8.615850e-47 |
| Msa0128180 | Msa0388220 | 0.808323 | 3.276621e-50 | -8.615850e-47 |
| Msa0138210 | Msa0388220 | 0.833948 | 3.976636e-56 | -8.615850e-47 |
| Msa0143850 | Msa0388220 | 0.818123 | 2.310009e-52 | -8.615850e-47 |
| Msa0144790 | Msa0388220 | 0.817790 | 2.747044e-52 | -8.615850e-47 |
| Msa0160670 | Msa0388220 | 0.810191 | 1.303030e-50 | -8.615850e-47 |
| Msa0165300 | Msa0388220 | 0.834916 | 2.272777e-56 | -8.615850e-47 |
| Msa0174360 | Msa0388220 | 0.825355 | 4.903863e-54 | -8.615850e-47 |
| Msa0175050 | Msa0388220 | 0.828084 | 1.094019e-54 | -8.615850e-47 |
| Msa0177170 | Msa0388220 | 0.814507 | 1.487337e-51 | -8.615850e-47 |
| Msa0183420 | Msa0388220 | 0.832803 | 7.675782e-56 | -8.615850e-47 |
| Msa0194720 | Msa0388220 | 0.804614 | 1.985035e-49 | -8.615850e-47 |
| Msa0200560 | Msa0388220 | 0.825882 | 3.678592e-54 | -8.615850e-47 |
| Msa0218350 | Msa0388220 | 0.817711 | 2.861926e-52 | -8.615850e-47 |
| Msa0222550 | Msa0388220 | 0.832379 | 9.778252e-56 | -8.615850e-47 |
| Msa0227230 | Msa0388220 | 0.834614 | 2.707639e-56 | -8.615850e-47 |
| Msa0237310 | Msa0388220 | 0.810406 | 1.171388e-50 | -8.615850e-47 |
| Msa0365370 | Msa0388220 | 0.806030 | 1.002361e-49 | -8.615850e-47 |
| Msa0365490 | Msa0388220 | 0.817864 | 2.642861e-52 | -8.615850e-47 |
| Msa0377440 | Msa0388220 | 0.847407 | 1.179653e-59 | -8.615850e-47 |
| Msa0382260 | Msa0388220 | 0.802492 | 5.467082e-49 | -8.615850e-47 |
| Msa0387050 | Msa0388220 | 0.801437 | 9.006640e-49 | -8.615850e-47 |
| Msa0388030 | Msa0388220 | -0.806028 | 1.003371e-49 | -8.615850e-47 |
| Msa0388220 | Msa0390960 | 0.837893 | 3.971975e-57 | -8.615850e-47 |
| Msa0388220 | Msa0398090 | 0.813979 | 1.945495e-51 | -8.615850e-47 |
| Msa0388220 | Msa0410300 | 0.801134 | 1.039214e-48 | -8.615850e-47 |
| Msa0388220 | Msa0417650 | 0.846473 | 2.124470e-59 | -8.615850e-47 |
| Msa0388220 | Msa0417730 | 0.857853 | 1.229922e-62 | -8.615850e-47 |
| Msa0388220 | Msa0423840 | 0.838769 | 2.362171e-57 | -8.615850e-47 |
| Msa0388220 | Msa0436370 | 0.812932 | 3.305428e-51 | -8.615850e-47 |
| Msa0388220 | Msa0439970 | 0.811766 | 5.940155e-51 | -8.615850e-47 |
| Msa0388220 | Msa0458440 | 0.824632 | 7.263913e-54 | -8.615850e-47 |
| Msa0388220 | Msa0510290 | 0.810404 | 1.172122e-50 | -8.615850e-47 |
| Msa0388220 | Msa0512870 | 0.812752 | 3.619253e-51 | -8.615850e-47 |
| Msa0388220 | Msa0517650 | 0.847041 | 1.486323e-59 | -8.615850e-47 |
| Msa0388220 | Msa0518960 | 0.834172 | 3.494522e-56 | -8.615850e-47 |
| Msa0388220 | Msa0530650 | 0.810171 | 1.316267e-50 | -8.615850e-47 |
| Msa0388220 | Msa0570640 | 0.810225 | 1.281172e-50 | -8.615850e-47 |
| Msa0388220 | Msa0573040 | 0.833086 | 6.526934e-56 | -8.615850e-47 |
| Msa0388220 | Msa0579200 | 0.807378 | 5.205752e-50 | -8.615850e-47 |
| Msa0388220 | Msa0580640 | 0.804132 | 2.501416e-49 | -8.615850e-47 |
| Msa0388220 | Msa0587190 | 0.820177 | 7.873788e-53 | -8.615850e-47 |
| Msa0388220 | Msa0592180 | 0.809357 | 1.969420e-50 | -8.615850e-47 |
| Msa0388220 | Msa0594200 | 0.800535 | 1.377190e-48 | -8.615850e-47 |
| Msa0388220 | Msa0610670 | 0.811844 | 5.713591e-51 | -8.615850e-47 |
| Msa0388220 | Msa0621240 | 0.818652 | 1.753326e-52 | -8.615850e-47 |
| Msa0388220 | Msa0626220 | 0.816992 | 4.154261e-52 | -8.615850e-47 |
| Msa0388220 | Msa0626280 | 0.805755 | 1.145539e-49 | -8.615850e-47 |
| Msa0388220 | Msa0626990 | 0.813843 | 2.084812e-51 | -8.615850e-47 |
| Msa0388220 | Msa0627350 | 0.806482 | 8.050980e-50 | -8.615850e-47 |
| Msa0388220 | Msa0651270 | 0.803230 | 3.848689e-49 | -8.615850e-47 |
| Msa0388220 | Msa0653320 | -0.810758 | 9.831967e-51 | -8.615850e-47 |
| Msa0388220 | Msa0661320 | 0.800873 | 1.174711e-48 | -8.615850e-47 |
| Msa0388220 | Msa0663250 | 0.804800 | 1.815729e-49 | -8.615850e-47 |
| Msa0388220 | Msa0679550 | 0.814299 | 1.653639e-51 | -8.615850e-47 |
| Msa0388220 | Msa0682550 | 0.807485 | 4.939041e-50 | -8.615850e-47 |
| Msa0388220 | Msa0687450 | 0.847926 | 8.486351e-60 | -8.615850e-47 |
| Msa0388220 | Msa0689420 | 0.820047 | 8.431586e-53 | -8.615850e-47 |
| Msa0388220 | Msa0689760 | 0.826659 | 2.402661e-54 | -8.615850e-47 |
| Msa0388220 | Msa0702570 | 0.810650 | 1.037122e-50 | -8.615850e-47 |
| Msa0388220 | Msa0703730 | 0.800446 | 1.436041e-48 | -8.615850e-47 |
| Msa0388220 | Msa0711130 | 0.804413 | 2.186405e-49 | -8.615850e-47 |
| Msa0388220 | Msa0716860 | 0.821191 | 4.604632e-53 | -8.615850e-47 |
| Msa0388220 | Msa0724950 | 0.806986 | 6.301598e-50 | -8.615850e-47 |
| Msa0388220 | Msa0749400 | 0.810510 | 1.112121e-50 | -8.615850e-47 |
| Msa0388220 | Msa0756530 | 0.822922 | 1.827883e-53 | -8.615850e-47 |
| Msa0388220 | Msa0757800 | 0.822455 | 2.346911e-53 | -8.615850e-47 |
| Msa0388220 | Msa0773310 | 0.804000 | 2.664932e-49 | -8.615850e-47 |
| Msa0388220 | Msa0780280 | 0.845533 | 3.827407e-59 | -8.615850e-47 |
| Msa0388220 | Msa0799060 | 0.824618 | 7.321907e-54 | -8.615850e-47 |
| Msa0388220 | Msa0820890 | 0.812290 | 4.567447e-51 | -8.615850e-47 |
| Msa0388220 | Msa0821800 | 0.829331 | 5.466248e-55 | -8.615850e-47 |
| Msa0388220 | Msa0828920 | 0.806575 | 7.697598e-50 | -8.615850e-47 |
| Msa0388220 | Msa0831150 | 0.819960 | 8.826721e-53 | -8.615850e-47 |
| Msa0388220 | Msa0832090 | 0.836087 | 1.149320e-56 | -8.615850e-47 |
| Msa0388220 | Msa0845070 | 0.807802 | 4.231436e-50 | -8.615850e-47 |
| Msa0388220 | Msa0861830 | 0.834968 | 2.205592e-56 | -8.615850e-47 |
| Msa0388220 | Msa0868160 | 0.803743 | 3.013553e-49 | -8.615850e-47 |
| Msa0388220 | Msa0893810 | 0.803694 | 3.084890e-49 | -8.615850e-47 |
| Msa0388220 | Msa0898660 | 0.801917 | 7.181616e-49 | -8.615850e-47 |
| Msa0388220 | Msa0902710 | 0.804868 | 1.757187e-49 | -8.615850e-47 |
| Msa0388220 | Msa0903390 | 0.800572 | 1.353559e-48 | -8.615850e-47 |
| Msa0388220 | Msa0926670 | 0.801878 | 7.315890e-49 | -8.615850e-47 |
| Msa0388220 | Msa0939000 | 0.803993 | 2.674123e-49 | -8.615850e-47 |
| Msa0388220 | Msa0959010 | 0.826546 | 2.557276e-54 | -8.615850e-47 |
| Msa0388220 | Msa0975940 | 0.810539 | 1.096029e-50 | -8.615850e-47 |
| Msa0388220 | Msa0981310 | 0.843466 | 1.376867e-58 | -8.615850e-47 |
| Msa0388220 | Msa0989530 | 0.811942 | 5.440208e-51 | -8.615850e-47 |
| Msa0388220 | Msa1010070 | 0.836604 | 8.491727e-57 | -8.615850e-47 |
| Msa0388220 | Msa1031230 | 0.802745 | 4.848949e-49 | -8.615850e-47 |
| Msa0388220 | Msa1032170 | 0.825563 | 4.377582e-54 | -8.615850e-47 |
| Msa0388220 | Msa1050740 | 0.800268 | 1.560633e-48 | -8.615850e-47 |
| Msa0388220 | Msa1056460 | 0.837639 | 4.616198e-57 | -8.615850e-47 |
| Msa0388220 | Msa1070690 | 0.805655 | 1.202062e-49 | -8.615850e-47 |
| Msa0388220 | Msa1077070 | 0.822429 | 2.379607e-53 | -8.615850e-47 |
| Msa0388220 | Msa1095790 | 0.804267 | 2.344697e-49 | -8.615850e-47 |
| Msa0388220 | Msa1109820 | 0.813135 | 2.983241e-51 | -8.615850e-47 |
| Msa0388220 | Msa1122780 | 0.829880 | 4.018457e-55 | -8.615850e-47 |
| Msa0388220 | Msa1133570 | 0.832194 | 1.086453e-55 | -8.615850e-47 |
| Msa0388220 | Msa1152950 | 0.850304 | 1.851791e-60 | -8.615850e-47 |
| Msa0388220 | Msa1174310 | 0.818729 | 1.684210e-52 | -8.615850e-47 |
| Msa0388220 | Msa1205370 | 0.802492 | 5.467472e-49 | -8.615850e-47 |
| Msa0388220 | Msa1211340 | 0.803330 | 3.669649e-49 | -8.615850e-47 |
| Msa0388220 | Msa1215070 | 0.806408 | 8.344778e-50 | -8.615850e-47 |
| Msa0388220 | Msa1220150 | 0.805146 | 1.536630e-49 | -8.615850e-47 |
| Msa0388220 | Msa1224830 | 0.815239 | 1.023353e-51 | -8.615850e-47 |
| Msa0388220 | Msa1227330 | 0.813430 | 2.569550e-51 | -8.615850e-47 |
| Msa0388220 | Msa1235400 | 0.803010 | 4.274968e-49 | -8.615850e-47 |
| Msa0388220 | Msa1259640 | 0.808494 | 3.013651e-50 | -8.615850e-47 |
| Msa0388220 | Msa1296300 | 0.812930 | 3.309377e-51 | -8.615850e-47 |
| Msa0388220 | Msa1307550 | 0.833348 | 5.615724e-56 | -8.615850e-47 |
| Msa0388220 | Msa1314770 | 0.805645 | 1.207603e-49 | -8.615850e-47 |
| Msa0388220 | Msa1329790 | 0.806406 | 8.356343e-50 | -8.615850e-47 |
| Msa0388220 | Msa1333420 | 0.813460 | 2.531820e-51 | -8.615850e-47 |
| Msa0388220 | Msa1333680 | 0.800164 | 1.638946e-48 | -8.615850e-47 |
| Msa0388220 | Msa1333730 | 0.831924 | 1.266437e-55 | -8.615850e-47 |
| Msa0388220 | Msa1335710 | 0.820005 | 8.620905e-53 | -8.615850e-47 |
| Msa0388220 | Msa1338250 | 0.856108 | 4.020199e-62 | -8.615850e-47 |
| Msa0388220 | Msa1340810 | 0.810866 | 9.314578e-51 | -8.615850e-47 |
| Msa0388220 | Msa1348360 | 0.827247 | 1.738187e-54 | -8.615850e-47 |
| Msa0388220 | Msa1373350 | 0.809715 | 1.650052e-50 | -8.615850e-47 |
| Msa0388220 | Msa1379850 | 0.811766 | 5.940155e-51 | -8.615850e-47 |
| Msa0388220 | Msa1393800 | 0.805663 | 1.197337e-49 | -8.615850e-47 |
| Msa0388220 | Msa1400070 | 0.822699 | 2.060059e-53 | -8.615850e-47 |
| Msa0388220 | Msa1402270 | 0.815134 | 1.080042e-51 | -8.615850e-47 |
| Msa0388220 | Msa1418260 | 0.813537 | 2.434611e-51 | -8.615850e-47 |
| Msa0388220 | Msa1420250 | 0.827364 | 1.629942e-54 | -8.615850e-47 |
| Msa0388220 | Msa1422840 | 0.841586 | 4.344168e-58 | -8.615850e-47 |
| Msa0388220 | Msa1426910 | 0.813128 | 2.993717e-51 | -8.615850e-47 |
| Msa0388220 | Msa1433220 | 0.828074 | 1.100318e-54 | -8.615850e-47 |
| Msa0388220 | Msa1435080 | 0.801030 | 1.091503e-48 | -8.615850e-47 |
| Msa0388220 | Msa1439710 | 0.805936 | 1.049231e-49 | -8.615850e-47 |
| Msa0388220 | Msa1445220 | 0.825637 | 4.206304e-54 | -8.615850e-47 |
| Msa0388220 | Msa1457430 | 0.811606 | 6.438032e-51 | -8.615850e-47 |
| Msa0388220 | Msa1461710 | 0.810921 | 9.064434e-51 | -8.615850e-47 |
| Msa0388220 | Msa1464290 | 0.810111 | 1.355922e-50 | -8.615850e-47 |
| Msa0388220 | Msa1466590 | 0.823498 | 1.341180e-53 | -8.615850e-47 |
| Msa0249100 | Msa0388220 | 0.809732 | 1.636439e-50 | -8.615850e-47 |
| Msa0269520 | Msa0388220 | 0.875017 | 4.290344e-68 | -8.615850e-47 |
| Msa0274730 | Msa0388220 | 0.811074 | 8.396092e-51 | -8.615850e-47 |
| Msa0301810 | Msa0388220 | 0.844601 | 6.832481e-59 | -8.615850e-47 |
| Msa0317740 | Msa0388220 | 0.803384 | 3.576990e-49 | -8.615850e-47 |
| Msa0320800 | Msa0388220 | 0.825528 | 4.462864e-54 | -8.615850e-47 |
| Msa0343300 | Msa0388220 | 0.804025 | 2.633676e-49 | -8.615850e-47 |
| Msa0347950 | Msa0388220 | 0.817165 | 3.797944e-52 | -8.615850e-47 |
| Msa0347990 | Msa0388220 | 0.819009 | 1.454173e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388220 | MtrunA17_Chr6g0461901 | 96.809 | 188 | 6 | 0 | 1 | 188 | 1 | 188 | 4.25e-130 | 388 |
| Msa0388220 | MtrunA17_Chr7g0252281 | 63.874 | 191 | 66 | 2 | 1 | 188 | 3 | 193 | 1.39e-79 | 254 |
| Msa0388220 | MtrunA17_Chr2g0327571 | 33.019 | 106 | 69 | 1 | 84 | 187 | 81 | 186 | 1.90e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388220 | AT5G13950.1 | 48.421 | 190 | 96 | 1 | 1 | 188 | 1 | 190 | 2.19e-58 | 196 |
| Msa0388220 | AT5G13950.2 | 48.421 | 190 | 96 | 1 | 1 | 188 | 1 | 190 | 2.19e-58 | 196 |
| Msa0388220 | AT5G13950.4 | 48.421 | 190 | 96 | 1 | 1 | 188 | 1 | 190 | 2.19e-58 | 196 |
| Msa0388220 | AT5G13950.3 | 48.421 | 190 | 96 | 1 | 1 | 188 | 1 | 190 | 2.29e-58 | 196 |
Find 50 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGAAGGAAACGATTAAA+TGG | 0.242588 | 3_1:+92623385 | Msa0388220:CDS |
| TGTGAGCTCTCATGTCATTT+TGG | 0.259570 | 3_1:-92623474 | None:intergenic |
| GAGACTTCAGATGCTGTTCC+TGG | 0.270260 | 3_1:-92624553 | None:intergenic |
| TGCTGAATTAACGAATTTAC+AGG | 0.297316 | 3_1:+92621931 | Msa0388220:five_prime_UTR |
| TAGACCCAGATTCTTTCTTT+TGG | 0.301992 | 3_1:-92623449 | None:intergenic |
| TCCTGGCCAACAACTATATC+TGG | 0.314691 | 3_1:-92624536 | None:intergenic |
| TCCAAGTCAAATATTTCTTC+AGG | 0.318953 | 3_1:-92623634 | None:intergenic |
| CAAGACCAAAAGAAAGAATC+TGG | 0.334064 | 3_1:+92623444 | Msa0388220:CDS |
| ACTCTCTTCATTTCATTTCA+AGG | 0.336202 | 3_1:+92621753 | Msa0388220:five_prime_UTR |
| TACAGATTAAACATAATTAC+TGG | 0.339285 | 3_1:+92621888 | Msa0388220:intron |
| GTTGCCAAACGTGAACAAAT+TGG | 0.342331 | 3_1:+92623532 | Msa0388220:CDS |
| GATACCAATTTGTTCACGTT+TGG | 0.359636 | 3_1:-92623536 | None:intergenic |
| CATTGTCGGCTATGGTTCTA+AGG | 0.360161 | 3_1:+92623414 | Msa0388220:CDS |
| AGTGCTTGGCAGGTTGTATA+TGG | 0.361704 | 3_1:+92623263 | Msa0388220:intron |
| GCTGGGACCGACTTTGACTT+TGG | 0.413899 | 3_1:+92623886 | Msa0388220:CDS |
| CTTCATCCAGATATAGTTGT+TGG | 0.425372 | 3_1:+92624530 | Msa0388220:CDS |
| ACATTATTCCGTCGTGTCAA+TGG | 0.434197 | 3_1:+92623354 | Msa0388220:exon |
| AGGGGTGCTTCAGTTTGTTC+TGG | 0.434825 | 3_1:+92624503 | Msa0388220:intron |
| GAGTGAAGTGCTTTCATATG+AGG | 0.436943 | 3_1:+92623663 | Msa0388220:CDS |
| AGAGAAGGAAACGATTAAAT+GGG | 0.438903 | 3_1:+92623386 | Msa0388220:CDS |
| AGCTCACATCTCTGTTGAAT+GGG | 0.439397 | 3_1:+92623489 | Msa0388220:CDS |
| TCCAGATATAGTTGTTGGCC+AGG | 0.441772 | 3_1:+92624535 | Msa0388220:CDS |
| TGATGTGGCTCTATGCCTCT+AGG | 0.447848 | 3_1:-92623844 | None:intergenic |
| GAGCTCACATCTCTGTTGAA+TGG | 0.464382 | 3_1:+92623488 | Msa0388220:CDS |
| GTGTTCCTTCAGTGCTTGGC+AGG | 0.465564 | 3_1:+92623253 | Msa0388220:intron |
| ATGTCTTACCAATTCAAAAC+GGG | 0.469187 | 3_1:-92623913 | None:intergenic |
| GATGTCTTACCAATTCAAAA+CGG | 0.471660 | 3_1:-92623914 | None:intergenic |
| CTGTGGAAGATTTGCTAGCT+GGG | 0.477005 | 3_1:+92623869 | Msa0388220:CDS |
| GCTGTGGAAGATTTGCTAGC+TGG | 0.480854 | 3_1:+92623868 | Msa0388220:CDS |
| TTAAATGGGGCAAGCATTGT+CGG | 0.484052 | 3_1:+92623400 | Msa0388220:CDS |
| CTCAGAAGAGAGCATACTAC+AGG | 0.493196 | 3_1:+92624573 | Msa0388220:CDS |
| TAGGGAGAAAATTCATAAGA+TGG | 0.494658 | 3_1:-92623825 | None:intergenic |
| ACCTGAAGAAATATTTGACT+TGG | 0.513763 | 3_1:+92623633 | Msa0388220:CDS |
| GGGGCAAGCATTGTCGGCTA+TGG | 0.515429 | 3_1:+92623406 | Msa0388220:CDS |
| TTCTAGTGATCATAAAGTCT+TGG | 0.516091 | 3_1:+92623594 | Msa0388220:CDS |
| GTGAACAAATTGGTATCAGT+TGG | 0.517990 | 3_1:+92623542 | Msa0388220:CDS |
| AGGAAGAAGACGAAGAGAAG+AGG | 0.519656 | 3_1:-92621678 | None:intergenic |
| CTAGAAACATGATTGACAAA+CGG | 0.530163 | 3_1:-92623577 | None:intergenic |
| GATGTGGCTCTATGCCTCTA+GGG | 0.554205 | 3_1:-92623843 | None:intergenic |
| AGAGAAAGCGTTGCGTTGAG+AGG | 0.555465 | 3_1:-92621698 | None:intergenic |
| TTACTGGTAATTCTTTCACT+TGG | 0.563497 | 3_1:+92621904 | Msa0388220:five_prime_UTR |
| CAATGGCTGCTGATCAGAGA+AGG | 0.577305 | 3_1:+92623371 | Msa0388220:exon |
| AAGACCAAAAGAAAGAATCT+GGG | 0.610922 | 3_1:+92623445 | Msa0388220:CDS |
| AAATCTTCCACAGCTTGATG+TGG | 0.618686 | 3_1:-92623859 | None:intergenic |
| GCAGGTTGTATATGGATGAA+AGG | 0.636425 | 3_1:+92623271 | Msa0388220:five_prime_UTR |
| TCATAAAGTCTTGGCAGATG+TGG | 0.640609 | 3_1:+92623603 | Msa0388220:CDS |
| ATCAGCAGCCATTGACACGA+CGG | 0.646566 | 3_1:-92623362 | None:intergenic |
| CATAGAGCCACATCAAGCTG+TGG | 0.661529 | 3_1:+92623852 | Msa0388220:CDS |
| GAGAAGGAAACGATTAAATG+GGG | 0.662367 | 3_1:+92623387 | Msa0388220:CDS |
| GGGACTTCCAAAGTCAAAGT+CGG | 0.668788 | 3_1:-92623893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGATTGAATTAAATAAAAAT+TGG | - | chr3_1:92621801-92621820 | None:intergenic | 15.0% |
| !! | GAATAATAAAAACGATAATT+AGG | - | chr3_1:92621822-92621841 | None:intergenic | 15.0% |
| !!! | TTTTTTATCTTTCATACTTA+TGG | + | chr3_1:92622837-92622856 | Msa0388220:intron | 15.0% |
| !!! | TTTTTATCTTTCATACTTAT+GGG | + | chr3_1:92622838-92622857 | Msa0388220:intron | 15.0% |
| !!! | GTATTTTAAAAGATGATTTT+AGG | - | chr3_1:92623754-92623773 | None:intergenic | 15.0% |
| !!! | ATCATCTTTTAAAATACTTT+TGG | + | chr3_1:92623757-92623776 | Msa0388220:intron | 15.0% |
| !!! | TTTAAAATACTTTTGGAAAT+TGG | + | chr3_1:92623764-92623783 | Msa0388220:intron | 15.0% |
| !!! | TAAAATTTGAAATTCAATCT+AGG | + | chr3_1:92624130-92624149 | Msa0388220:intron | 15.0% |
| !! | TACAGATTAAACATAATTAC+TGG | + | chr3_1:92621888-92621907 | Msa0388220:intron | 20.0% |
| !!! | TTTTTAATTTATTGTTTCGC+CGG | + | chr3_1:92621972-92621991 | Msa0388220:intron | 20.0% |
| !!! | TATTTGAATTGTTTTGCTTA+TGG | + | chr3_1:92622113-92622132 | Msa0388220:intron | 20.0% |
| !! | CATCATTTACAAATTATTAC+CGG | - | chr3_1:92622286-92622305 | None:intergenic | 20.0% |
| !! | ATAATTGAATGTAATCACAT+GGG | - | chr3_1:92622385-92622404 | None:intergenic | 20.0% |
| !!! | GTTTATGCTTGATTTTTTAT+TGG | + | chr3_1:92622620-92622639 | Msa0388220:intron | 20.0% |
| !!! | AACATTGTTTATTTTTGTGT+TGG | + | chr3_1:92622798-92622817 | Msa0388220:intron | 20.0% |
| !! | AAAATCATATTCAACTTATC+TGG | + | chr3_1:92623181-92623200 | Msa0388220:intron | 20.0% |
| !! | ATAAATGTAATTAGTAAAGC+TGG | - | chr3_1:92624087-92624106 | None:intergenic | 20.0% |
| !!! | TGAATTTCAAATTTTACCAA+TGG | - | chr3_1:92624126-92624145 | None:intergenic | 20.0% |
| !!! | TCTAGATTTTATAACTTGAA+AGG | + | chr3_1:92624217-92624236 | Msa0388220:intron | 20.0% |
| !!! | CTAGATTTTATAACTTGAAA+GGG | + | chr3_1:92624218-92624237 | Msa0388220:intron | 20.0% |
| !!! | AAAAGTATTTATATGTTTGC+AGG | + | chr3_1:92624483-92624502 | Msa0388220:intron | 20.0% |
| !!! | AAAGTATTTATATGTTTGCA+GGG | + | chr3_1:92624484-92624503 | Msa0388220:intron | 20.0% |
| !! | ATTTTTGCAAAATCAAATCG+AGG | - | chr3_1:92622020-92622039 | None:intergenic | 25.0% |
| ! | TAATTATTACCTATCAAGCA+CGG | + | chr3_1:92622235-92622254 | Msa0388220:intron | 25.0% |
| ! | CATAATTGAATGTAATCACA+TGG | - | chr3_1:92622386-92622405 | None:intergenic | 25.0% |
| ! | CTATTTACTATTTGAGCTTA+CGG | + | chr3_1:92622740-92622759 | Msa0388220:intron | 25.0% |
| ! | TATTTACTATTTGAGCTTAC+GGG | + | chr3_1:92622741-92622760 | Msa0388220:intron | 25.0% |
| !!! | AGCTACTCAGTTTTATTTAT+TGG | + | chr3_1:92622976-92622995 | Msa0388220:intron | 25.0% |
| !!! | GCTACTCAGTTTTATTTATT+GGG | + | chr3_1:92622977-92622996 | Msa0388220:intron | 25.0% |
| ! | AAATAAAACAGCTTCAGTAA+AGG | - | chr3_1:92623130-92623149 | None:intergenic | 25.0% |
| !!! | TCAACTTATGATTAGCTTTT+GGG | + | chr3_1:92624052-92624071 | Msa0388220:intron | 25.0% |
| !! | TCAAATTTTACCAATGGAAT+TGG | - | chr3_1:92624120-92624139 | None:intergenic | 25.0% |
| ! | AGCATAGAAACTAAGAAAAT+GGG | - | chr3_1:92624261-92624280 | None:intergenic | 25.0% |
| ! | AAGCATAGAAACTAAGAAAA+TGG | - | chr3_1:92624262-92624281 | None:intergenic | 25.0% |
| ! | AAGTATTTATATGTTTGCAG+GGG | + | chr3_1:92624485-92624504 | Msa0388220:intron | 25.0% |
| ACTCTCTTCATTTCATTTCA+AGG | + | chr3_1:92621753-92621772 | Msa0388220:five_prime_UTR | 30.0% | |
| TTACTGGTAATTCTTTCACT+TGG | + | chr3_1:92621904-92621923 | Msa0388220:five_prime_UTR | 30.0% | |
| TGCTGAATTAACGAATTTAC+AGG | + | chr3_1:92621931-92621950 | Msa0388220:five_prime_UTR | 30.0% | |
| TAAATTACATGTGCCAATGT+CGG | + | chr3_1:92622463-92622482 | Msa0388220:intron | 30.0% | |
| TCAAATAGTAAATAGCTGCA+GGG | - | chr3_1:92622735-92622754 | None:intergenic | 30.0% | |
| CGTTAAAAGTAACTGATAAC+TGG | + | chr3_1:92622862-92622881 | Msa0388220:intron | 30.0% | |
| AAGTAACTGATAACTGGATT+TGG | + | chr3_1:92622868-92622887 | Msa0388220:intron | 30.0% | |
| TTGTGATTGTATCCAAACAA+AGG | - | chr3_1:92622897-92622916 | None:intergenic | 30.0% | |
| !!! | TAGTTGTTTTTATCACCACT+TGG | + | chr3_1:92622949-92622968 | Msa0388220:intron | 30.0% |
| TTTATACACTCATGTCTATG+TGG | + | chr3_1:92623066-92623085 | Msa0388220:intron | 30.0% | |
| TTATACACTCATGTCTATGT+GGG | + | chr3_1:92623067-92623086 | Msa0388220:intron | 30.0% | |
| TATTCAACTTATCTGGTCAT+TGG | + | chr3_1:92623188-92623207 | Msa0388220:intron | 30.0% | |
| AGAGAAGGAAACGATTAAAT+GGG | + | chr3_1:92623386-92623405 | Msa0388220:CDS | 30.0% | |
| AAGACCAAAAGAAAGAATCT+GGG | + | chr3_1:92623445-92623464 | Msa0388220:CDS | 30.0% | |
| CTAGAAACATGATTGACAAA+CGG | - | chr3_1:92623580-92623599 | None:intergenic | 30.0% | |
| TTCTAGTGATCATAAAGTCT+TGG | + | chr3_1:92623594-92623613 | Msa0388220:CDS | 30.0% | |
| ACCTGAAGAAATATTTGACT+TGG | + | chr3_1:92623633-92623652 | Msa0388220:CDS | 30.0% | |
| TCCAAGTCAAATATTTCTTC+AGG | - | chr3_1:92623637-92623656 | None:intergenic | 30.0% | |
| ATATGAGGTAGATAAAACAG+TGG | + | chr3_1:92623678-92623697 | Msa0388220:intron | 30.0% | |
| !! | AAATACTTTTGGAAATTGGC+AGG | + | chr3_1:92623768-92623787 | Msa0388220:intron | 30.0% |
| TAGGGAGAAAATTCATAAGA+TGG | - | chr3_1:92623828-92623847 | None:intergenic | 30.0% | |
| ATGTCTTACCAATTCAAAAC+GGG | - | chr3_1:92623916-92623935 | None:intergenic | 30.0% | |
| GATGTCTTACCAATTCAAAA+CGG | - | chr3_1:92623917-92623936 | None:intergenic | 30.0% | |
| !!! | GTCAACTTATGATTAGCTTT+TGG | + | chr3_1:92624051-92624070 | Msa0388220:intron | 30.0% |
| ! | AATTTTACCAATGGAATTGG+TGG | - | chr3_1:92624117-92624136 | None:intergenic | 30.0% |
| TAACTTGAAAGGGCTTAATT+TGG | + | chr3_1:92624228-92624247 | Msa0388220:intron | 30.0% | |
| GATATAACCATAACAAACAG+AGG | - | chr3_1:92624312-92624331 | None:intergenic | 30.0% | |
| TAATGCTTTGCTAACACTAA+AGG | - | chr3_1:92624395-92624414 | None:intergenic | 30.0% | |
| ! | ACACATTTGATCAGAAGTGT+TGG | - | chr3_1:92622326-92622345 | None:intergenic | 35.0% |
| TTGAATGTAATCACATGGGT+CGG | - | chr3_1:92622381-92622400 | None:intergenic | 35.0% | |
| CTCAAATAGTAAATAGCTGC+AGG | - | chr3_1:92622736-92622755 | None:intergenic | 35.0% | |
| !! | GGATGTTTAAGGCTTTAAGA+TGG | + | chr3_1:92622762-92622781 | Msa0388220:intron | 35.0% |
| ! | TGGATTTGGTTACCTTTGTT+TGG | + | chr3_1:92622882-92622901 | Msa0388220:intron | 35.0% |
| AGACATGAGTGTATAAAGAG+TGG | - | chr3_1:92623063-92623082 | None:intergenic | 35.0% | |
| CAGAGAAGGAAACGATTAAA+TGG | + | chr3_1:92623385-92623404 | Msa0388220:CDS | 35.0% | |
| GAGAAGGAAACGATTAAATG+GGG | + | chr3_1:92623387-92623406 | Msa0388220:CDS | 35.0% | |
| CAAGACCAAAAGAAAGAATC+TGG | + | chr3_1:92623444-92623463 | Msa0388220:CDS | 35.0% | |
| ! | TAGACCCAGATTCTTTCTTT+TGG | - | chr3_1:92623452-92623471 | None:intergenic | 35.0% |
| ! | GATACCAATTTGTTCACGTT+TGG | - | chr3_1:92623539-92623558 | None:intergenic | 35.0% |
| GTGAACAAATTGGTATCAGT+TGG | + | chr3_1:92623542-92623561 | Msa0388220:CDS | 35.0% | |
| !!! | GCTCTATTTTTTAACTCACC+AGG | + | chr3_1:92623721-92623740 | Msa0388220:intron | 35.0% |
| ! | ATGATTTTAGGCACAAATCC+TGG | - | chr3_1:92623742-92623761 | None:intergenic | 35.0% |
| ! | CTTATGAATTTTCTCCCTAG+AGG | + | chr3_1:92623829-92623848 | Msa0388220:CDS | 35.0% |
| CAAAACGAAGACTAGATAAC+TGG | - | chr3_1:92624182-92624201 | None:intergenic | 35.0% | |
| GTTTCTATGCTTGCAAGTTA+TGG | + | chr3_1:92624270-92624289 | Msa0388220:intron | 35.0% | |
| ! | ATATGCTCCTCTGTTTGTTA+TGG | + | chr3_1:92624302-92624321 | Msa0388220:intron | 35.0% |
| CTTCATCCAGATATAGTTGT+TGG | + | chr3_1:92624530-92624549 | Msa0388220:CDS | 35.0% | |
| AAATCGAGGTTCCATCATCT+CGG | - | chr3_1:92622006-92622025 | None:intergenic | 40.0% | |
| !! | GATCAGAAGTGTTGGTGTTA+TGG | - | chr3_1:92622318-92622337 | None:intergenic | 40.0% |
| TGTTGGACATGGACATGTAT+CGG | - | chr3_1:92622358-92622377 | None:intergenic | 40.0% | |
| TGTTTGTGTCAGTGCTTCAT+AGG | + | chr3_1:92622440-92622459 | Msa0388220:intron | 40.0% | |
| ACACACTTAGTGCTTAGAAG+TGG | + | chr3_1:92622671-92622690 | Msa0388220:intron | 40.0% | |
| TGCTTAGAAGTGGCTAATTG+CGG | + | chr3_1:92622681-92622700 | Msa0388220:intron | 40.0% | |
| TTGAGCTTACGGGATGTTTA+AGG | + | chr3_1:92622751-92622770 | Msa0388220:intron | 40.0% | |
| !! | AAGGCTTTAAGATGGTTGTG+TGG | + | chr3_1:92622770-92622789 | Msa0388220:intron | 40.0% |
| ACTGAGTAGCTAAATCCAAG+TGG | - | chr3_1:92622967-92622986 | None:intergenic | 40.0% | |
| TTTCCCAATAGCGATCAACT+TGG | + | chr3_1:92623099-92623118 | Msa0388220:intron | 40.0% | |
| !! | CAACCAAGTTGATCGCTATT+GGG | - | chr3_1:92623105-92623124 | None:intergenic | 40.0% |
| !! | TCAACCAAGTTGATCGCTAT+TGG | - | chr3_1:92623106-92623125 | None:intergenic | 40.0% |
| CTTATCTGGTCATTGGAACT+TGG | + | chr3_1:92623195-92623214 | Msa0388220:intron | 40.0% | |
| GCAGGTTGTATATGGATGAA+AGG | + | chr3_1:92623271-92623290 | Msa0388220:five_prime_UTR | 40.0% | |
| ACATTATTCCGTCGTGTCAA+TGG | + | chr3_1:92623354-92623373 | Msa0388220:exon | 40.0% | |
| ! | TTAAATGGGGCAAGCATTGT+CGG | + | chr3_1:92623400-92623419 | Msa0388220:CDS | 40.0% |
| !! | TGTGAGCTCTCATGTCATTT+TGG | - | chr3_1:92623477-92623496 | None:intergenic | 40.0% |
| AGCTCACATCTCTGTTGAAT+GGG | + | chr3_1:92623489-92623508 | Msa0388220:CDS | 40.0% | |
| ! | GTTTGGCAACAACTCTTTTC+TGG | - | chr3_1:92623522-92623541 | None:intergenic | 40.0% |
| GTTGCCAAACGTGAACAAAT+TGG | + | chr3_1:92623532-92623551 | Msa0388220:CDS | 40.0% | |
| TCATAAAGTCTTGGCAGATG+TGG | + | chr3_1:92623603-92623622 | Msa0388220:CDS | 40.0% | |
| ! | GAGTGAAGTGCTTTCATATG+AGG | + | chr3_1:92623663-92623682 | Msa0388220:CDS | 40.0% |
| !! | CTTTTGGAAATTGGCAGGTT+TGG | + | chr3_1:92623773-92623792 | Msa0388220:intron | 40.0% |
| AAATCTTCCACAGCTTGATG+TGG | - | chr3_1:92623862-92623881 | None:intergenic | 40.0% | |
| !! | TTGGAAGTCCCGTTTTGAAT+TGG | + | chr3_1:92623905-92623924 | Msa0388220:CDS | 40.0% |
| AGGAAGAAGACGAAGAGAAG+AGG | - | chr3_1:92621681-92621700 | None:intergenic | 45.0% | |
| AATCGAGGTTCCATCATCTC+GGG | - | chr3_1:92622005-92622024 | None:intergenic | 45.0% | |
| TACATGTGTCCGTGCTTGAT+AGG | - | chr3_1:92622247-92622266 | None:intergenic | 45.0% | |
| GTACGTACAAGCATAGACAC+CGG | + | chr3_1:92622264-92622283 | Msa0388220:intron | 45.0% | |
| !! | CAGAAGTGTTGGTGTTATGG+AGG | - | chr3_1:92622315-92622334 | None:intergenic | 45.0% |
| CACAAACACAGACACAACAC+TGG | - | chr3_1:92622428-92622447 | None:intergenic | 45.0% | |
| ! | TTGGCTTTCAAAGAGCCTAG+CGG | + | chr3_1:92622639-92622658 | Msa0388220:intron | 45.0% |
| GCTTAGAAGTGGCTAATTGC+GGG | + | chr3_1:92622682-92622701 | Msa0388220:intron | 45.0% | |
| ! | TGTTGTCGTTTACCATCGTC+TGG | + | chr3_1:92623001-92623020 | Msa0388220:intron | 45.0% |
| ACTCATGTCTATGTGGGACT+TGG | + | chr3_1:92623073-92623092 | Msa0388220:intron | 45.0% | |
| CTCATGTCTATGTGGGACTT+GGG | + | chr3_1:92623074-92623093 | Msa0388220:intron | 45.0% | |
| CATTGTGTTCCTTCAGTGCT+TGG | + | chr3_1:92623249-92623268 | Msa0388220:intron | 45.0% | |
| AGTGCTTGGCAGGTTGTATA+TGG | + | chr3_1:92623263-92623282 | Msa0388220:intron | 45.0% | |
| ! | CATTGTCGGCTATGGTTCTA+AGG | + | chr3_1:92623414-92623433 | Msa0388220:CDS | 45.0% |
| GAGCTCACATCTCTGTTGAA+TGG | + | chr3_1:92623488-92623507 | Msa0388220:CDS | 45.0% | |
| !! | CTGTGGAAGATTTGCTAGCT+GGG | + | chr3_1:92623869-92623888 | Msa0388220:CDS | 45.0% |
| GGGACTTCCAAAGTCAAAGT+CGG | - | chr3_1:92623896-92623915 | None:intergenic | 45.0% | |
| CGATCATCCACCAATTCCAT+TGG | + | chr3_1:92624107-92624126 | Msa0388220:intron | 45.0% | |
| TCCAGATATAGTTGTTGGCC+AGG | + | chr3_1:92624535-92624554 | Msa0388220:CDS | 45.0% | |
| TCCTGGCCAACAACTATATC+TGG | - | chr3_1:92624539-92624558 | None:intergenic | 45.0% | |
| ! | CTCAGAAGAGAGCATACTAC+AGG | + | chr3_1:92624573-92624592 | Msa0388220:CDS | 45.0% |
| !!! | TTATTTTGATATTTTATTAT+TGG | + | chr3_1:92622065-92622084 | Msa0388220:intron | 5.0% |
| !! | AGAGAAAGCGTTGCGTTGAG+AGG | - | chr3_1:92621701-92621720 | None:intergenic | 50.0% |
| CATCATCTCGGGATTCGAAC+CGG | - | chr3_1:92621994-92622013 | None:intergenic | 50.0% | |
| GTAATCACATGGGTCGGTGT+TGG | - | chr3_1:92622375-92622394 | None:intergenic | 50.0% | |
| ACATGTGCCAATGTCGGTGT+TGG | + | chr3_1:92622469-92622488 | Msa0388220:intron | 50.0% | |
| CTGTTGTCCAACACCGACAT+TGG | - | chr3_1:92622479-92622498 | None:intergenic | 50.0% | |
| !! | TACAACCTGCCAAGCACTGA+AGG | - | chr3_1:92623261-92623280 | None:intergenic | 50.0% |
| ATCAGCAGCCATTGACACGA+CGG | - | chr3_1:92623365-92623384 | None:intergenic | 50.0% | |
| CAATGGCTGCTGATCAGAGA+AGG | + | chr3_1:92623371-92623390 | Msa0388220:exon | 50.0% | |
| ! | GATGTGGCTCTATGCCTCTA+GGG | - | chr3_1:92623846-92623865 | None:intergenic | 50.0% |
| ! | TGATGTGGCTCTATGCCTCT+AGG | - | chr3_1:92623847-92623866 | None:intergenic | 50.0% |
| CATAGAGCCACATCAAGCTG+TGG | + | chr3_1:92623852-92623871 | Msa0388220:CDS | 50.0% | |
| !! | GCTGTGGAAGATTTGCTAGC+TGG | + | chr3_1:92623868-92623887 | Msa0388220:CDS | 50.0% |
| !! | AGGGGTGCTTCAGTTTGTTC+TGG | + | chr3_1:92624503-92624522 | Msa0388220:intron | 50.0% |
| GAGACTTCAGATGCTGTTCC+TGG | - | chr3_1:92624556-92624575 | None:intergenic | 50.0% | |
| CGGTTCGAATCCCGAGATGA+TGG | + | chr3_1:92621992-92622011 | Msa0388220:intron | 55.0% | |
| !! | ACATGGGTCGGTGTTGGACA+TGG | - | chr3_1:92622369-92622388 | None:intergenic | 55.0% |
| GGACAGATATGCTGGAACGC+AGG | - | chr3_1:92622714-92622733 | None:intergenic | 55.0% | |
| AGCTGCAGGGACAGATATGC+TGG | - | chr3_1:92622722-92622741 | None:intergenic | 55.0% | |
| GCAGAGCATACACCAGACGA+TGG | - | chr3_1:92623016-92623035 | None:intergenic | 55.0% | |
| GTGTTCCTTCAGTGCTTGGC+AGG | + | chr3_1:92623253-92623272 | Msa0388220:intron | 55.0% | |
| ! | GCTGGGACCGACTTTGACTT+TGG | + | chr3_1:92623886-92623905 | Msa0388220:CDS | 55.0% |
| GTGTGTGTCAGTTCGCCGCT+AGG | - | chr3_1:92622657-92622676 | None:intergenic | 60.0% | |
| ! | GGGGCAAGCATTGTCGGCTA+TGG | + | chr3_1:92623406-92623425 | Msa0388220:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 92621650 | 92624622 | 92621650 | ID=Msa0388220;Name=Msa0388220 |
| chr3_1 | mRNA | 92621650 | 92624622 | 92621650 | ID=Msa0388220-mRNA-1;Parent=Msa0388220;Name=Msa0388220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=293|1|0.8|1|0.5|0.4|5|0|188 |
| chr3_1 | exon | 92621650 | 92621774 | 92621650 | ID=Msa0388220-mRNA-1:exon:26021;Parent=Msa0388220-mRNA-1 |
| chr3_1 | exon | 92621893 | 92621952 | 92621893 | ID=Msa0388220-mRNA-1:exon:26022;Parent=Msa0388220-mRNA-1 |
| chr3_1 | exon | 92623265 | 92623684 | 92623265 | ID=Msa0388220-mRNA-1:exon:26023;Parent=Msa0388220-mRNA-1 |
| chr3_1 | exon | 92623790 | 92623926 | 92623790 | ID=Msa0388220-mRNA-1:exon:26024;Parent=Msa0388220-mRNA-1 |
| chr3_1 | exon | 92624505 | 92624622 | 92624505 | ID=Msa0388220-mRNA-1:exon:26025;Parent=Msa0388220-mRNA-1 |
| chr3_1 | five_prime_UTR | 92621650 | 92621774 | 92621650 | ID=Msa0388220-mRNA-1:five_prime_utr;Parent=Msa0388220-mRNA-1 |
| chr3_1 | five_prime_UTR | 92621893 | 92621952 | 92621893 | ID=Msa0388220-mRNA-1:five_prime_utr;Parent=Msa0388220-mRNA-1 |
| chr3_1 | five_prime_UTR | 92623265 | 92623372 | 92623265 | ID=Msa0388220-mRNA-1:five_prime_utr;Parent=Msa0388220-mRNA-1 |
| chr3_1 | CDS | 92623373 | 92623684 | 92623373 | ID=Msa0388220-mRNA-1:cds;Parent=Msa0388220-mRNA-1 |
| chr3_1 | CDS | 92623790 | 92623926 | 92623790 | ID=Msa0388220-mRNA-1:cds;Parent=Msa0388220-mRNA-1 |
| chr3_1 | CDS | 92624505 | 92624622 | 92624505 | ID=Msa0388220-mRNA-1:cds;Parent=Msa0388220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
