AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 102 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCACACCTGCTAATTATT+TGG 0.126188 7_2:-6815827 Msa1046350:five_prime_UTR
CACTGAAAAGAAGGCTTCTT+TGG 0.199240 7_2:+6814444 None:intergenic
CTTGAATGCTTTACAACCTT+TGG 0.248565 7_2:+6816235 None:intergenic
AGACAACTGCCCCTGCTATA+TGG 0.291848 7_2:-6816443 Msa1046350:five_prime_UTR
TGTGGTGGCTTCACCACTTT+TGG 0.294940 7_2:+6816552 None:intergenic
GAGTGTTTCTGATGACTTCT+TGG 0.298952 7_2:-6816186 Msa1046350:intron
CTACACTTATTAGAAACTTT+TGG 0.302263 7_2:+6815797 None:intergenic
ATTATAAAACAAACAATTCA+TGG 0.321671 7_2:-6816646 Msa1046350:five_prime_UTR
CTTCTTTATAATACTCTTGA+AGG 0.329380 7_2:+6816208 None:intergenic
TGGGTAAATTTAGTAATTCC+TGG 0.331703 7_2:+6816255 None:intergenic
GAGGTGGGAAAGAGGAAGTT+TGG 0.332856 7_2:-6816600 Msa1046350:five_prime_UTR
GCTGACAAGTTCGAGAATAA+AGG 0.333106 7_2:-6813671 Msa1046350:CDS
GAGAAGATGAACAACCTTCT+TGG 0.339326 7_2:-6813717 Msa1046350:five_prime_UTR
CATCATGTGTTGTTTGGTTA+AGG 0.339453 7_2:+6817045 None:intergenic
CTATGCATCCCTATTCTTTG+AGG 0.352998 7_2:+6815477 None:intergenic
TTGAATGCTTTACAACCTTT+GGG 0.356531 7_2:+6816236 None:intergenic
AGAAAGGGGCGGTGTCAAAT+TGG 0.361505 7_2:-6808463 Msa1046350:CDS
CTTGTTACAGCTTGCAGAAA+AGG 0.375354 7_2:-6815854 Msa1046350:intron
TCCCTTGCTTGTGCTTGCAT+TGG 0.379829 7_2:+6813738 None:intergenic
GTATATGTATCTTAAATCAT+TGG 0.398393 7_2:-6808397 Msa1046350:CDS
ATATATATGAATGAATGAAT+AGG 0.410249 7_2:+6817069 None:intergenic
TATATATGAATGAATGAATA+GGG 0.415207 7_2:+6817070 None:intergenic
TATGCATCCCTATTCTTTGA+GGG 0.426789 7_2:+6815478 None:intergenic
GGACGCAGAGCGCAAGGTCA+AGG 0.428212 7_2:-6816021 Msa1046350:five_prime_UTR
GAAACGAAGTAACCAAGTTC+AGG 0.430270 7_2:+6817009 None:intergenic
AGAAGATGAACAACCTTCTT+GGG 0.433478 7_2:-6813716 Msa1046350:five_prime_UTR
AGCGCCATTTCTCCTGAACT+TGG 0.439828 7_2:-6817021 Msa1046350:five_prime_UTR
GTGTTAGGGAAGCCAACTAT+TGG 0.443053 7_2:-6814424 Msa1046350:five_prime_UTR
CTTTCCAACAGTTTCTAGAA+AGG 0.444961 7_2:-6808479 Msa1046350:CDS
GCGCTGCATCATGTGTTGTT+TGG 0.448270 7_2:+6817039 None:intergenic
GGCTGGACCCCTCAAAGAAT+AGG 0.448578 7_2:-6815486 Msa1046350:five_prime_UTR
GTAACCAAGTTCAGGAGAAA+TGG 0.454380 7_2:+6817017 None:intergenic
TGTAGAAAAGCTTGCGGAAG+AGG 0.455918 7_2:-6816042 Msa1046350:five_prime_UTR
ATGGAAGTGAGGTGGGAAAG+AGG 0.457108 7_2:-6816608 Msa1046350:five_prime_UTR
CTATTAGTATTCCATATAGC+AGG 0.460489 7_2:+6816432 None:intergenic
GCTGGACCCCTCAAAGAATA+GGG 0.460662 7_2:-6815485 Msa1046350:five_prime_UTR
CTTCCCTAACACTGAAAAGA+AGG 0.462487 7_2:+6814435 None:intergenic
CAAGTTCGAGAATAAAGGAT+TGG 0.462911 7_2:-6813666 Msa1046350:CDS
TATGAATGAATGAATAGGGC+TGG 0.463552 7_2:+6817074 None:intergenic
GGAAAAGTTTCTTCATTTGT+TGG 0.463833 7_2:+6816505 None:intergenic
CTAATAAGTGTAGCGACAAA+AGG 0.465206 7_2:-6815787 Msa1046350:five_prime_UTR
AAGTTTCTTCATTTGTTGGT+TGG 0.465423 7_2:+6816509 None:intergenic
TTTCCAACAGTTTCTAGAAA+GGG 0.465851 7_2:-6808478 Msa1046350:CDS
TTTGCAGAGGTGCCAATAGT+TGG 0.470202 7_2:+6814412 None:intergenic
TTGTTACAGCTTGCAGAAAA+GGG 0.470529 7_2:-6815853 Msa1046350:intron
TATATGTATCTTAAATCATT+GGG 0.474485 7_2:-6808396 Msa1046350:CDS
TCAGGAACAGTTATCAGATC+AGG 0.484564 7_2:-6807864 Msa1046350:intron
CGCCCCTTTCTAGAAACTGT+TGG 0.486981 7_2:+6808475 None:intergenic
GACGCAGAGCGCAAGGTCAA+GGG 0.490217 7_2:-6816020 Msa1046350:five_prime_UTR
AGCATAAAATTATCTCGTAA+TGG 0.495874 7_2:+6813691 None:intergenic
GTTTGAACATCTTCCTGTGT+TGG 0.502744 7_2:-6807718 Msa1046350:three_prime_UTR
AAGTTCGAGAATAAAGGATT+GGG 0.504352 7_2:-6813665 Msa1046350:CDS
TCAAGCTGAAACGTGGAAGT+AGG 0.505409 7_2:+6808507 None:intergenic
GAAAGAGGAAGTTTGGTAGT+AGG 0.507605 7_2:-6816593 Msa1046350:five_prime_UTR
AGAGCGCAAGGTCAAGGGAG+AGG 0.508044 7_2:-6816015 Msa1046350:five_prime_UTR
TCAGAAGATGAAAGAGCAGC+AGG 0.508746 7_2:-6816363 Msa1046350:five_prime_UTR
AAACACAAGTTGCTCAGAAA+GGG 0.510831 7_2:-6815507 Msa1046350:five_prime_UTR
TTCTTAGAAGACGATGATGA+TGG 0.518843 7_2:-6816294 Msa1046350:five_prime_UTR
AAAACACAAGTTGCTCAGAA+AGG 0.521430 7_2:-6815508 Msa1046350:five_prime_UTR
TTCTTGTGGTCTGACAGTAC+TGG 0.523091 7_2:+6816071 None:intergenic
TATACTCACGTGCTCGCTTG+TGG 0.523202 7_2:+6816484 None:intergenic
GGCCAATGCAAGCACAAGCA+AGG 0.526431 7_2:-6813740 Msa1046350:five_prime_UTR
GGTGATGACGAGATTCAGCC+AGG 0.534563 7_2:-6816273 Msa1046350:five_prime_UTR
CTCAAAGAATAGGGATGCAT+AGG 0.539548 7_2:-6815476 Msa1046350:five_prime_UTR
ACTTTATTCTGTCCGTGTGG+TGG 0.539904 7_2:+6816537 None:intergenic
GCCAATGCAAGCACAAGCAA+GGG 0.548228 7_2:-6813739 Msa1046350:five_prime_UTR
TGCGAGTCCAAATAATTAGC+AGG 0.548925 7_2:+6815820 None:intergenic
TCAGATCAGGAAGAGAAGAA+AGG 0.550858 7_2:-6807851 Msa1046350:CDS
GTTGAACATGGAAGTGAGGT+GGG 0.554596 7_2:-6816615 Msa1046350:five_prime_UTR
ACAAGTTGCTCAGAAAGGGC+TGG 0.557598 7_2:-6815503 Msa1046350:five_prime_UTR
TTCCAACAGTTTCTAGAAAG+GGG 0.561038 7_2:-6808477 Msa1046350:CDS
TTTCTACAACAAGATTCTTG+TGG 0.567648 7_2:+6816057 None:intergenic
ATGCATCCCTATTCTTTGAG+GGG 0.570354 7_2:+6815479 None:intergenic
AACTATTGGCACCTCTGCAA+AGG 0.570490 7_2:-6814410 Msa1046350:intron
TCTTAAATCATTGGGACATG+TGG 0.572442 7_2:-6808388 Msa1046350:CDS
GGAAGAGGACGCAGAGCGCA+AGG 0.578454 7_2:-6816027 Msa1046350:five_prime_UTR
TATTAGTATTCCATATAGCA+GGG 0.579667 7_2:+6816433 None:intergenic
TCTCGTAATGGAGCCCAAGA+AGG 0.580268 7_2:+6813703 None:intergenic
ATGAATGAATGAATAGGGCT+GGG 0.583514 7_2:+6817075 None:intergenic
ATGGCGCAAGTGGTTGAACA+TGG 0.583568 7_2:-6816627 Msa1046350:five_prime_UTR
GTTTGAACATCTTCCTGTGG+TGG 0.586950 7_2:-6807783 Msa1046350:three_prime_UTR
CGTTTCTGAAATCACTCCAA+AGG 0.589935 7_2:-6816992 Msa1046350:intron
CAAACAATTCATGGCGCAAG+TGG 0.595838 7_2:-6816637 Msa1046350:five_prime_UTR
ATTGGGACATGTGGAGAACA+AGG 0.597774 7_2:-6808379 Msa1046350:intron
TCAAAGAATAGGGATGCATA+GGG 0.604935 7_2:-6815475 Msa1046350:intron
AGCTGTTTCAAGCTGAAACG+TGG 0.608332 7_2:+6808500 None:intergenic
TCTTGTTGTAGAAAAGCTTG+CGG 0.611963 7_2:-6816048 Msa1046350:five_prime_UTR
GAATTACTAAATTTACCCAA+AGG 0.612529 7_2:-6816251 Msa1046350:five_prime_UTR
TGAAACGTGGAAGTAGGTTG+AGG 0.612568 7_2:+6808513 None:intergenic
AAGAATGTTACTGATAAGAA+CGG 0.615430 7_2:-6816321 Msa1046350:five_prime_UTR
GGTTGAACATGGAAGTGAGG+TGG 0.619215 7_2:-6816616 Msa1046350:five_prime_UTR
ATAAGTGTAGCGACAAAAGG+AGG 0.628567 7_2:-6815784 Msa1046350:intron
CTGACAGATCTTCCTCCTCG+TGG 0.637768 7_2:+6816382 None:intergenic
AGGTTGTAAAGCATTCAAGA+TGG 0.647177 7_2:-6816231 Msa1046350:five_prime_UTR
TGTAACAATCACCTTTGCAG+AGG 0.648315 7_2:+6814399 None:intergenic
CAACAGTTTCTAGAAAGGGG+CGG 0.655090 7_2:-6808474 Msa1046350:CDS
TTAACTTTATTCTGTCCGTG+TGG 0.661100 7_2:+6816534 None:intergenic
ATTAGTATTCCATATAGCAG+GGG 0.676019 7_2:+6816434 None:intergenic
AATGTTTGAACATCTTCCTG+TGG 0.681822 7_2:-6807786 Msa1046350:three_prime_UTR
AAGTTTGGTAGTAGGAACCA+AGG 0.681936 7_2:-6816585 Msa1046350:five_prime_UTR
AAAGTGGTGAAGCCACCACA+CGG 0.690683 7_2:-6816549 Msa1046350:five_prime_UTR
AGTGGTTGAACATGGAAGTG+AGG 0.721910 7_2:-6816619 Msa1046350:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATAAAATTTATTTATA+AGG - chr7_2:6813694-6813713 Msa1046350:exon 0.0%
!! TTATTAGAGAATTAAAAAAT+TGG - chr7_2:6808642-6808661 Msa1046350:intron 10.0%
!! TAATAATGATAATAATACAA+AGG + chr7_2:6809211-6809230 None:intergenic 10.0%
!! TTGTATTATTATCATTATTA+AGG - chr7_2:6809211-6809230 Msa1046350:intron 10.0%
!!! AAGTTTACTATTTTAAATAT+AGG + chr7_2:6809657-6809676 None:intergenic 10.0%
!! TATAATTATTGAAAAATAAG+AGG - chr7_2:6810125-6810144 Msa1046350:intron 10.0%
!! ATAATTATTGAAAAATAAGA+GGG - chr7_2:6810126-6810145 Msa1046350:intron 10.0%
!! AATAGAGTAAATAAATAATT+TGG + chr7_2:6810555-6810574 None:intergenic 10.0%
!! TGTATATAAATTCATAAAAT+TGG + chr7_2:6810687-6810706 None:intergenic 10.0%
!!! TTTATATGCATTTAAAATTT+CGG + chr7_2:6812695-6812714 None:intergenic 10.0%
!!! TGATCAATTTTTTTTTTTTT+TGG - chr7_2:6813467-6813486 Msa1046350:intron 10.0%
!! TAAATATTATATTACTCAAT+GGG + chr7_2:6816701-6816720 None:intergenic 10.0%
!! TTAAATATTATATTACTCAA+TGG + chr7_2:6816702-6816721 None:intergenic 10.0%
!!! AATTTTAATTATTTTTGCAA+AGG - chr7_2:6816785-6816804 Msa1046350:intron 10.0%
!! TATATATGAATGAATGAATA+GGG + chr7_2:6807702-6807721 None:intergenic 15.0%
!! ATATATATGAATGAATGAAT+AGG + chr7_2:6807703-6807722 None:intergenic 15.0%
!! TCTATTAAAATTACTTAGAT+TGG - chr7_2:6807865-6807884 Msa1046350:intron 15.0%
!! ATTATAAAACAAACAATTCA+TGG - chr7_2:6808123-6808142 Msa1046350:intron 15.0%
!!! TTTCTTTTTCTTTTAAATTG+AGG - chr7_2:6809016-6809035 Msa1046350:intron 15.0%
!! AATAGAAGAAAACAAAATTT+AGG + chr7_2:6809170-6809189 None:intergenic 15.0%
!! AATGTGTTAAAAAAAAAATG+TGG + chr7_2:6809753-6809772 None:intergenic 15.0%
!! TAATTATTGAAAAATAAGAG+GGG - chr7_2:6810127-6810146 Msa1046350:intron 15.0%
!!! AAAAAATTTAATTTCCCATT+TGG - chr7_2:6811559-6811578 Msa1046350:intron 15.0%
!!! AACTTTTAAGTAAAAGATTT+AGG - chr7_2:6811588-6811607 Msa1046350:intron 15.0%
!! CTCTAATTATTAATCAAATT+CGG + chr7_2:6811676-6811695 None:intergenic 15.0%
!! ATAATAATTGGAGTAATATT+TGG - chr7_2:6812144-6812163 Msa1046350:intron 15.0%
!! TCATATGTCAAAAATAAAAT+TGG - chr7_2:6812394-6812413 Msa1046350:intron 15.0%
!!! TTTTGTTAATGTATCTTAAT+TGG - chr7_2:6812729-6812748 Msa1046350:intron 15.0%
!! AAAAACCTAAAACAAAAAAA+TGG - chr7_2:6813066-6813085 Msa1046350:intron 15.0%
!!! ATATACCATTTTTTTGTTTT+AGG + chr7_2:6813074-6813093 None:intergenic 15.0%
!! AATTGGAAATTTAAAAAATG+TGG + chr7_2:6813319-6813338 None:intergenic 15.0%
!! ATAAGATATAAGCAATTTAT+TGG + chr7_2:6813556-6813575 None:intergenic 15.0%
!!! TTTATAAGGTTTTTTAATTG+AGG - chr7_2:6813708-6813727 Msa1046350:five_prime_UTR 15.0%
!!! TTATAAGGTTTTTTAATTGA+GGG - chr7_2:6813709-6813728 Msa1046350:five_prime_UTR 15.0%
!! AATTAAATTACACTATTAAG+GGG + chr7_2:6815117-6815136 None:intergenic 15.0%
!! CAATTAAATTACACTATTAA+GGG + chr7_2:6815118-6815137 None:intergenic 15.0%
!!! GATAATTATTTTCAAATGTT+AGG + chr7_2:6815143-6815162 None:intergenic 15.0%
!! AAGTATGATAATATATTGAT+AGG + chr7_2:6815776-6815795 None:intergenic 15.0%
!! TATATGTATCTTAAATCATT+GGG - chr7_2:6816373-6816392 Msa1046350:five_prime_UTR 15.0%
!! TATATAAATGTGCAAAATGA+TGG + chr7_2:6808038-6808057 None:intergenic 20.0%
!! TGTGTGACATATTAATTAAT+AGG - chr7_2:6808093-6808112 Msa1046350:intron 20.0%
!!! CATAAATTTTAGTGGTAATT+GGG + chr7_2:6808838-6808857 None:intergenic 20.0%
!!! ACATAAATTTTAGTGGTAAT+TGG + chr7_2:6808839-6808858 None:intergenic 20.0%
!!! TACCTGATAGATAATATTTT+GGG + chr7_2:6808881-6808900 None:intergenic 20.0%
!!! TTACCTGATAGATAATATTT+TGG + chr7_2:6808882-6808901 None:intergenic 20.0%
!! TTAAATTGAGGTTTATTCTA+TGG - chr7_2:6809028-6809047 Msa1046350:intron 20.0%
!! AAAGAAAAAGAAATCTCATT+TGG - chr7_2:6809396-6809415 Msa1046350:intron 20.0%
!! AAGAAAAAGAAATCTCATTT+GGG - chr7_2:6809397-6809416 Msa1046350:intron 20.0%
!! TTCTTTAATGATAAAACTTG+AGG - chr7_2:6809610-6809629 Msa1046350:intron 20.0%
!! TTTAAAAAAAGTGAATCGAA+AGG + chr7_2:6809810-6809829 None:intergenic 20.0%
!! ATTAATTACCCAAAAAACAA+TGG + chr7_2:6809895-6809914 None:intergenic 20.0%
!! TCATATCACAAAAAAATCTT+CGG + chr7_2:6810059-6810078 None:intergenic 20.0%
!!! GCAATCATTTTGAATATATT+AGG + chr7_2:6810255-6810274 None:intergenic 20.0%
!!! CATTCAACTTATATACATTT+TGG + chr7_2:6810525-6810544 None:intergenic 20.0%
!! TTGATATCACATTAATTTAG+AGG + chr7_2:6810748-6810767 None:intergenic 20.0%
!! TAACTTCAAAATATACTTAC+TGG + chr7_2:6811141-6811160 None:intergenic 20.0%
!! CTTTATTATCCAATTGTATT+AGG - chr7_2:6811450-6811469 Msa1046350:intron 20.0%
!! CTATAGTAATAGACTATTTA+TGG - chr7_2:6811491-6811510 Msa1046350:intron 20.0%
!!! AATTGGATGATTTACTTTTT+CGG + chr7_2:6811525-6811544 None:intergenic 20.0%
!! ATTACTCCAATTATTATCAT+AGG + chr7_2:6812141-6812160 None:intergenic 20.0%
!!! TATAGTTACGCATATTTTTA+GGG - chr7_2:6812280-6812299 Msa1046350:intron 20.0%
!! TTCAATTAATCAACATTAGA+CGG - chr7_2:6812558-6812577 Msa1046350:intron 20.0%
!! TTAAAATTTCGGATACAATT+CGG + chr7_2:6812684-6812703 None:intergenic 20.0%
!! AAGACAAAATTAGAAGAAAA+GGG + chr7_2:6813345-6813364 None:intergenic 20.0%
!!! TATAAGGTTTTTTAATTGAG+GGG - chr7_2:6813710-6813729 Msa1046350:five_prime_UTR 20.0%
!! CAAATCAAAAAATACAAGTT+AGG + chr7_2:6814451-6814470 None:intergenic 20.0%
!! CCAATTAAATTACACTATTA+AGG + chr7_2:6815119-6815138 None:intergenic 20.0%
!! CCTTAATAGTGTAATTTAAT+TGG - chr7_2:6815116-6815135 Msa1046350:intron 20.0%
!! GAAAATAATTATCAGTTTCT+TGG - chr7_2:6815150-6815169 Msa1046350:intron 20.0%
!! TTAGATAATTAGTCAAAGTT+GGG + chr7_2:6815392-6815411 None:intergenic 20.0%
!! TTTAGATAATTAGTCAAAGT+TGG + chr7_2:6815393-6815412 None:intergenic 20.0%
!! GTATATGTATCTTAAATCAT+TGG - chr7_2:6816372-6816391 Msa1046350:five_prime_UTR 20.0%
!!! TTAGTTTTGTAGCATTTTTT+TGG - chr7_2:6816439-6816458 Msa1046350:five_prime_UTR 20.0%
!!! AAATTTCTAGCAACATTTAA+TGG + chr7_2:6816725-6816744 None:intergenic 20.0%
!!! TTATTTCTGCATTATGTTAA+TGG - chr7_2:6816847-6816866 Msa1046350:intron 20.0%
!! AATTAAAAAAATTCCAACAC+AGG + chr7_2:6817067-6817086 None:intergenic 20.0%
!!! GTTGGAATTTTTTTAATTGT+AGG - chr7_2:6817069-6817088 Msa1046350:five_prime_UTR 20.0%
! CATAGTTAGATTGAAATTGA+TGG + chr7_2:6807824-6807843 None:intergenic 25.0%
! TAATAGAGTAGAGTAATAAC+AGG + chr7_2:6807852-6807871 None:intergenic 25.0%
! TATTAGTATTCCATATAGCA+GGG + chr7_2:6808339-6808358 None:intergenic 25.0%
! AAGAATGTTACTGATAAGAA+CGG - chr7_2:6808448-6808467 Msa1046350:CDS 25.0%
! GAATTACTAAATTTACCCAA+AGG - chr7_2:6808518-6808537 Msa1046350:CDS 25.0%
! CTTCTTTATAATACTCTTGA+AGG + chr7_2:6808564-6808583 None:intergenic 25.0%
! ACTTGATGAATAACTCTATA+AGG - chr7_2:6808674-6808693 Msa1046350:intron 25.0%
!! GAGATCAACATAAATTTTAG+TGG + chr7_2:6808846-6808865 None:intergenic 25.0%
!! CTACACTTATTAGAAACTTT+TGG + chr7_2:6808975-6808994 None:intergenic 25.0%
!! TTCTTTTTCTTTACTTGTGA+CGG + chr7_2:6809388-6809407 None:intergenic 25.0%
! AGAAAAAGAAATCTCATTTG+GGG - chr7_2:6809398-6809417 Msa1046350:intron 25.0%
!! TTTCGGTTTATCTTTTATAG+AGG - chr7_2:6809429-6809448 Msa1046350:intron 25.0%
!! TTCGGTTTATCTTTTATAGA+GGG - chr7_2:6809430-6809449 Msa1046350:intron 25.0%
! TTGTCAGTATTATGAAATAG+CGG - chr7_2:6809471-6809490 Msa1046350:intron 25.0%
! AAATAGTAAACTTAAGAGTC+AGG - chr7_2:6809664-6809683 Msa1046350:intron 25.0%
!!! TCGATTCACTTTTTTTAAAG+AGG - chr7_2:6809811-6809830 Msa1046350:intron 25.0%
! TTAATTTCTTTCAACTGCTA+TGG - chr7_2:6809910-6809929 Msa1046350:intron 25.0%
! AAACTCAGTGTTATCAATAA+AGG + chr7_2:6810014-6810033 None:intergenic 25.0%
! ATAGGTATGAACAAAAGAAA+AGG + chr7_2:6810213-6810232 None:intergenic 25.0%
! CAGATTAGATAGTAAGAATT+GGG + chr7_2:6810277-6810296 None:intergenic 25.0%
! ACAGATTAGATAGTAAGAAT+TGG + chr7_2:6810278-6810297 None:intergenic 25.0%
!! TTCAAACACTGTTTAAAACT+AGG - chr7_2:6810444-6810463 Msa1046350:intron 25.0%
!! TCAAACACTGTTTAAAACTA+GGG - chr7_2:6810445-6810464 Msa1046350:intron 25.0%
!! ACAATAGAACAATTTTACAG+TGG + chr7_2:6810813-6810832 None:intergenic 25.0%
!! ATCCAAGCAATTTGATAATT+AGG + chr7_2:6810997-6811016 None:intergenic 25.0%
!! TTATCAAATTGCTTGGATTT+TGG - chr7_2:6810999-6811018 Msa1046350:intron 25.0%
! AGCATAAAATTATCTCGTAA+TGG + chr7_2:6811081-6811100 None:intergenic 25.0%
!!! AAAGGTTTTGAAACTTGAAA+AGG - chr7_2:6811239-6811258 Msa1046350:intron 25.0%
!!! AAGGTTTTGAAACTTGAAAA+GGG - chr7_2:6811240-6811259 Msa1046350:intron 25.0%
! TTCATTCTGTTACTAAAGAA+TGG - chr7_2:6811324-6811343 Msa1046350:intron 25.0%
! TGAACAAATTCAAAATTGGT+TGG + chr7_2:6811394-6811413 None:intergenic 25.0%
! TCAGTGAACAAATTCAAAAT+TGG + chr7_2:6811398-6811417 None:intergenic 25.0%
! ATCCAATTGTATTAGGAAAT+AGG - chr7_2:6811457-6811476 Msa1046350:intron 25.0%
! TTCCTATTTCCTAATACAAT+TGG + chr7_2:6811462-6811481 None:intergenic 25.0%
!!! AGATTTAGGATTTGATTTTG+TGG - chr7_2:6811602-6811621 Msa1046350:intron 25.0%
! ATTAGAGAAACAATACAATG+CGG - chr7_2:6811689-6811708 Msa1046350:intron 25.0%
! TAAAATTTGTAGAGCAATCA+TGG - chr7_2:6812103-6812122 Msa1046350:intron 25.0%
!! GTATAGTTACGCATATTTTT+AGG - chr7_2:6812279-6812298 Msa1046350:intron 25.0%
! AAATTGGCATTTCAAACTTT+AGG - chr7_2:6812410-6812429 Msa1046350:intron 25.0%
! TTGATGCATATATGAAATTG+AGG + chr7_2:6812473-6812492 None:intergenic 25.0%
!! ACGTAAGATGTTTAAAGTTT+AGG + chr7_2:6812762-6812781 None:intergenic 25.0%
!! TTGAAGTTTTGCAAAATTCA+GGG + chr7_2:6812865-6812884 None:intergenic 25.0%
!!! TTTGAAGTTTTGCAAAATTC+AGG + chr7_2:6812866-6812885 None:intergenic 25.0%
!! ACTCTTTTTACAAGAACTAA+TGG - chr7_2:6813117-6813136 Msa1046350:intron 25.0%
! CAAGACAAAATTAGAAGAAA+AGG + chr7_2:6813346-6813365 None:intergenic 25.0%
! ATGAATAGATAGCTAATATG+TGG + chr7_2:6813446-6813465 None:intergenic 25.0%
!!! TTTTTAATTGAGGGGTATTT+TGG - chr7_2:6813718-6813737 Msa1046350:five_prime_UTR 25.0%
! AGTAGATTTGATGTATTGTT+TGG + chr7_2:6813802-6813821 None:intergenic 25.0%
!!! TTTTTATTTGACAATTAGCC+TGG - chr7_2:6813953-6813972 Msa1046350:intron 25.0%
!!! CGTATTGATTTCAATATGTT+TGG + chr7_2:6813979-6813998 None:intergenic 25.0%
!! ATGAGATTGTTCATTTTCTA+GGG + chr7_2:6814080-6814099 None:intergenic 25.0%
! TCGTAACACATCAATTTATT+AGG - chr7_2:6814410-6814429 Msa1046350:intron 25.0%
! CGTAACACATCAATTTATTA+GGG - chr7_2:6814411-6814430 Msa1046350:five_prime_UTR 25.0%
! AAAAATACAAGTTAGGAACA+AGG + chr7_2:6814444-6814463 None:intergenic 25.0%
! CAAATCAACAAATACAAGTT+AGG - chr7_2:6815037-6815056 Msa1046350:intron 25.0%
!! TTACCTCAACAATATCTTTT+TGG + chr7_2:6815207-6815226 None:intergenic 25.0%
! CACATAATTTCATATGCTTA+AGG + chr7_2:6815290-6815309 None:intergenic 25.0%
! TGATATTGCTTCTGATTAAA+GGG + chr7_2:6815341-6815360 None:intergenic 25.0%
!! TAGTTGATTCTTAAGTAGAA+GGG + chr7_2:6815431-6815450 None:intergenic 25.0%
! AAAACAGTGTATCAAATTTG+AGG - chr7_2:6815509-6815528 Msa1046350:five_prime_UTR 25.0%
!! AACATTTTGTTCTGTAATGT+AGG - chr7_2:6815564-6815583 Msa1046350:intron 25.0%
! GTAAAAAGAAACTAGACAAT+GGG + chr7_2:6815950-6815969 None:intergenic 25.0%
! AGTAAAAAGAAACTAGACAA+TGG + chr7_2:6815951-6815970 None:intergenic 25.0%
!! TTTTATCTGCAACATACAAA+AGG + chr7_2:6815981-6816000 None:intergenic 25.0%
! AGATAACTCTCAATCAAAAA+AGG + chr7_2:6816096-6816115 None:intergenic 25.0%
! TATATAGAACCTACATGTTA+AGG + chr7_2:6816128-6816147 None:intergenic 25.0%
! TATATTACTCAATGGGAAAA+GGG + chr7_2:6816694-6816713 None:intergenic 25.0%
! TTATATTACTCAATGGGAAA+AGG + chr7_2:6816695-6816714 None:intergenic 25.0%
! AATTAAAAAAATTCCACCAC+AGG + chr7_2:6817002-6817021 None:intergenic 25.0%
!!! GGTGGAATTTTTTTAATTGT+AGG - chr7_2:6817004-6817023 Msa1046350:five_prime_UTR 25.0%
CTTAGATTGGTAAAACTTGT+AGG - chr7_2:6807878-6807897 Msa1046350:intron 30.0%
ATTGGTAAAACTTGTAGGTT+AGG - chr7_2:6807883-6807902 Msa1046350:intron 30.0%
AAAACTTGTAGGTTAGGTTT+AGG - chr7_2:6807889-6807908 Msa1046350:intron 30.0%
AAACTTGTAGGTTAGGTTTA+GGG - chr7_2:6807890-6807909 Msa1046350:intron 30.0%
! TACTTGTTTAGTTTAGCTCA+TGG - chr7_2:6808056-6808075 Msa1046350:intron 30.0%
!!! TCACCACTTTTGGTTTTTTA+CGG + chr7_2:6808210-6808229 None:intergenic 30.0%
! AAGTTTCTTCATTTGTTGGT+TGG + chr7_2:6808263-6808282 None:intergenic 30.0%
GGAAAAGTTTCTTCATTTGT+TGG + chr7_2:6808267-6808286 None:intergenic 30.0%
ATTAGTATTCCATATAGCAG+GGG + chr7_2:6808338-6808357 None:intergenic 30.0%
CTATTAGTATTCCATATAGC+AGG + chr7_2:6808340-6808359 None:intergenic 30.0%
TGGGTAAATTTAGTAATTCC+TGG + chr7_2:6808517-6808536 None:intergenic 30.0%
TTGAATGCTTTACAACCTTT+GGG + chr7_2:6808536-6808555 None:intergenic 30.0%
TTTCTACAACAAGATTCTTG+TGG + chr7_2:6808715-6808734 None:intergenic 30.0%
!! ATATTTTGGGCTACGAAAAT+TGG + chr7_2:6808868-6808887 None:intergenic 30.0%
AGCCCAAAATATTATCTATC+AGG - chr7_2:6808876-6808895 Msa1046350:intron 30.0%
!!! GGACTACTTTTGATTTCTTT+CGG - chr7_2:6809113-6809132 Msa1046350:intron 30.0%
TTACGTATTAGGGTGATTAA+AGG + chr7_2:6809701-6809720 None:intergenic 30.0%
TGAGAGAAGTTTACGTATTA+GGG + chr7_2:6809711-6809730 None:intergenic 30.0%
TTGAGAGAAGTTTACGTATT+AGG + chr7_2:6809712-6809731 None:intergenic 30.0%
GTGTTGAGAGGTTTAAAAAT+AGG + chr7_2:6809856-6809875 None:intergenic 30.0%
GTGTTATCAATAAAGGATAG+TGG + chr7_2:6810007-6810026 None:intergenic 30.0%
! GCTCTAAGTATGAGTTTAAA+AGG - chr7_2:6810080-6810099 Msa1046350:intron 30.0%
TATTGAAAAATAAGAGGGGT+TGG - chr7_2:6810131-6810150 Msa1046350:intron 30.0%
ATTGAAAAATAAGAGGGGTT+GGG - chr7_2:6810132-6810151 Msa1046350:intron 30.0%
AACACAGAAATAGAACAGAT+AGG + chr7_2:6810231-6810250 None:intergenic 30.0%
! TCTTTCAGTCAGTTTTTCAT+TGG - chr7_2:6810401-6810420 Msa1046350:intron 30.0%
! GTTTGAAGTTATCAACAGAA+AGG + chr7_2:6810431-6810450 None:intergenic 30.0%
GTTTAGACAAATTACCAAAC+TGG - chr7_2:6810837-6810856 Msa1046350:intron 30.0%
TGCCTAATTATCAAATTGCT+TGG - chr7_2:6810992-6811011 Msa1046350:intron 30.0%
AAGTTCGAGAATAAAGGATT+GGG - chr7_2:6811104-6811123 Msa1046350:intron 30.0%
TAAGCAATATGATGAGTACA+AGG + chr7_2:6811186-6811205 None:intergenic 30.0%
TGAATCAGATGACATTGAAA+AGG - chr7_2:6811221-6811240 Msa1046350:intron 30.0%
AGTAACAGAATGAACAGAAA+TGG + chr7_2:6811318-6811337 None:intergenic 30.0%
CTGTTACTAAAGAATGGAAT+TGG - chr7_2:6811330-6811349 Msa1046350:intron 30.0%
!! AATTGGTTGGTTTATACCAA+CGG + chr7_2:6811381-6811400 None:intergenic 30.0%
TTTCCAAGCTTTCGATTAAT+TGG + chr7_2:6811542-6811561 None:intergenic 30.0%
! TTTAATTTCCCATTTGGAAG+AGG - chr7_2:6811565-6811584 Msa1046350:intron 30.0%
TAAAAGTTCCTCTTCCAAAT+GGG + chr7_2:6811576-6811595 None:intergenic 30.0%
TTAAAAGTTCCTCTTCCAAA+TGG + chr7_2:6811577-6811596 None:intergenic 30.0%
!! TTAGGATTTGATTTTGTGGT+AGG - chr7_2:6811606-6811625 Msa1046350:intron 30.0%
!! TAGGATTTGATTTTGTGGTA+GGG - chr7_2:6811607-6811626 Msa1046350:intron 30.0%
GTTTGTATGATTGCATGATA+GGG + chr7_2:6811830-6811849 None:intergenic 30.0%
TGTTTGTATGATTGCATGAT+AGG + chr7_2:6811831-6811850 None:intergenic 30.0%
CTATCAAATAACTTCACTGA+TGG + chr7_2:6811931-6811950 None:intergenic 30.0%
!! CTGTATTGCATTTTAACCAT+TGG + chr7_2:6811965-6811984 None:intergenic 30.0%
TGGTTAAAATGCAATACAGA+TGG - chr7_2:6811966-6811985 Msa1046350:intron 30.0%
AGATCGCCTATGATAATAAT+TGG - chr7_2:6812132-6812151 Msa1046350:intron 30.0%
GATTGAATCTGATTCTTCTT+TGG - chr7_2:6812166-6812185 Msa1046350:intron 30.0%
! TAGTATACCTTTGTTTGCTA+GGG - chr7_2:6812369-6812388 Msa1046350:intron 30.0%
!! TTTAGGTTTTCTTCTCATTG+TGG - chr7_2:6812427-6812446 Msa1046350:intron 30.0%
TGCATATATGAAATTGAGGA+AGG + chr7_2:6812469-6812488 None:intergenic 30.0%
CCACAAGAAATGTAATTATG+TGG + chr7_2:6812516-6812535 None:intergenic 30.0%
CCACATAATTACATTTCTTG+TGG - chr7_2:6812513-6812532 Msa1046350:intron 30.0%
GTATATGCTACGTTTGTAAA+TGG - chr7_2:6812799-6812818 Msa1046350:intron 30.0%
TTGACGAAAGTTACAATTTC+AGG + chr7_2:6812836-6812855 None:intergenic 30.0%
! TGAAGTTTTGCAAAATTCAG+GGG + chr7_2:6812864-6812883 None:intergenic 30.0%
TGCAGGAAATTAACTAAATG+AGG + chr7_2:6812929-6812948 None:intergenic 30.0%
TGGAGAAATGAAAATGGTTA+AGG + chr7_2:6814048-6814067 None:intergenic 30.0%
!! TGTTCATTTTCTAGGGATTA+GGG + chr7_2:6814073-6814092 None:intergenic 30.0%
!! TTGTTCATTTTCTAGGGATT+AGG + chr7_2:6814074-6814093 None:intergenic 30.0%
! GATGAGATTGTTCATTTTCT+AGG + chr7_2:6814081-6814100 None:intergenic 30.0%
TGTTGGATTTCTTGATGTTA+GGG + chr7_2:6814126-6814145 None:intergenic 30.0%
ACAAACCTGTTATAAACATC+AGG + chr7_2:6814391-6814410 None:intergenic 30.0%
!! GAATTTGCTGGAATTAAAGA+GGG - chr7_2:6814651-6814670 Msa1046350:intron 30.0%
TGAAGATGACCAAATGATTT+GGG + chr7_2:6814803-6814822 None:intergenic 30.0%
ATGAAGATGACCAAATGATT+TGG + chr7_2:6814802-6814821 None:intergenic 30.0%
AAATCATTTGGTCATCTTCA+TGG - chr7_2:6814686-6814705 Msa1046350:intron 30.0%
AAATCATTTGGTCATCTTCA+TGG + chr7_2:6814686-6814705 None:intergenic 30.0%
ATGAAGATGACCAAATGATT+TGG - chr7_2:6814802-6814821 Msa1046350:intron 30.0%
TGAAGATGACCAAATGATTT+GGG - chr7_2:6814803-6814822 Msa1046350:intron 30.0%
!! GAATTTGCTGGAATTAAAGA+GGG + chr7_2:6814651-6814670 None:intergenic 30.0%
ACAAATACAAGTTAGGTACA+AGG - chr7_2:6815044-6815063 Msa1046350:intron 30.0%
CGCAACACATCAATTTATTA+GGG + chr7_2:6815073-6815092 None:intergenic 30.0%
TCGCAACACATCAATTTATT+AGG + chr7_2:6815074-6815093 None:intergenic 30.0%
! ATCAATCATCACTGGTTATA+TGG + chr7_2:6815250-6815269 None:intergenic 30.0%
CTGATATTGCTTCTGATTAA+AGG + chr7_2:6815342-6815361 None:intergenic 30.0%
AGTTGGGAGAAAATCAATAT+TGG + chr7_2:6815376-6815395 None:intergenic 30.0%
! AGTTGATTCTTAAGTAGAAG+GGG + chr7_2:6815430-6815449 None:intergenic 30.0%
! CTAGTTGATTCTTAAGTAGA+AGG + chr7_2:6815432-6815451 None:intergenic 30.0%
!!! GGACAGATCTTGTTATTTTA+AGG - chr7_2:6815641-6815660 Msa1046350:intron 30.0%
!!! CAGATCTTGTTATTTTAAGG+AGG - chr7_2:6815644-6815663 Msa1046350:intron 30.0%
AAGCAGAAAAGCTATACAAT+GGG + chr7_2:6815920-6815939 None:intergenic 30.0%
TAAGCAGAAAAGCTATACAA+TGG + chr7_2:6815921-6815940 None:intergenic 30.0%
ATAGAACTCACATAAATGTG+AGG + chr7_2:6816169-6816188 None:intergenic 30.0%
GCATATAATAGACACAACAA+AGG + chr7_2:6816210-6816229 None:intergenic 30.0%
TTGTTGTGTCTATTATATGC+AGG - chr7_2:6816210-6816229 Msa1046350:five_prime_UTR 30.0%
! TTTCCAACAGTTTCTAGAAA+GGG - chr7_2:6816291-6816310 Msa1046350:five_prime_UTR 30.0%
ATTAAAATTTCGCAGACCAA+AGG + chr7_2:6816774-6816793 None:intergenic 30.0%
!! GGAAACTAGTATTTTTGTGT+TGG - chr7_2:6816939-6816958 Msa1046350:intron 30.0%
ATGAATGAATGAATAGGGCT+GGG + chr7_2:6807697-6807716 None:intergenic 35.0%
TATGAATGAATGAATAGGGC+TGG + chr7_2:6807698-6807717 None:intergenic 35.0%
!! CATCATGTGTTGTTTGGTTA+AGG + chr7_2:6807727-6807746 None:intergenic 35.0%
AATATGTCACACACGAAAAC+AGG + chr7_2:6808086-6808105 None:intergenic 35.0%
TTAACTTTATTCTGTCCGTG+TGG + chr7_2:6808238-6808257 None:intergenic 35.0%
TTCTTAGAAGACGATGATGA+TGG - chr7_2:6808475-6808494 Msa1046350:CDS 35.0%
CTTGAATGCTTTACAACCTT+TGG + chr7_2:6808537-6808556 None:intergenic 35.0%
! AGGTTGTAAAGCATTCAAGA+TGG - chr7_2:6808538-6808557 Msa1046350:CDS 35.0%
! TCTTGTTGTAGAAAAGCTTG+CGG - chr7_2:6808721-6808740 Msa1046350:intron 35.0%
TTGTTACAGCTTGCAGAAAA+GGG - chr7_2:6808916-6808935 Msa1046350:intron 35.0%
TGTCACACCTGCTAATTATT+TGG - chr7_2:6808942-6808961 Msa1046350:intron 35.0%
CTAATAAGTGTAGCGACAAA+AGG - chr7_2:6808982-6809001 Msa1046350:intron 35.0%
ACAACAGTGAAATCAGTAAG+AGG + chr7_2:6809084-6809103 None:intergenic 35.0%
TTTCACTGTTGTTGTGAACA+TGG - chr7_2:6809092-6809111 Msa1046350:intron 35.0%
!!! CTACTTTTGATTTCTTTCGG+TGG - chr7_2:6809116-6809135 Msa1046350:intron 35.0%
AAAACACAAGTTGCTCAGAA+AGG - chr7_2:6809261-6809280 Msa1046350:intron 35.0%
AAACACAAGTTGCTCAGAAA+GGG - chr7_2:6809262-6809281 Msa1046350:intron 35.0%
TATGCATCCCTATTCTTTGA+GGG + chr7_2:6809294-6809313 None:intergenic 35.0%
TCAAAGAATAGGGATGCATA+GGG - chr7_2:6809294-6809313 Msa1046350:intron 35.0%
CATTTGGGGATTCATTGTTT+CGG - chr7_2:6809412-6809431 Msa1046350:intron 35.0%
TGGTTGTTGTAGCATCTATA+GGG - chr7_2:6809574-6809593 Msa1046350:intron 35.0%
AAAAAAAATGTGGCAGAGCA+TGG + chr7_2:6809743-6809762 None:intergenic 35.0%
!! CTGCATAATAAAGTGTTGAG+AGG + chr7_2:6809868-6809887 None:intergenic 35.0%
!!! TGCAGCATACCATTGTTTTT+TGG - chr7_2:6809883-6809902 Msa1046350:intron 35.0%
!!! GCAGCATACCATTGTTTTTT+GGG - chr7_2:6809884-6809903 Msa1046350:intron 35.0%
! TATTCCACATAGCAGACTTT+TGG - chr7_2:6809967-6809986 Msa1046350:intron 35.0%
! AAGCCTTCTTTTCAGTGTTA+GGG - chr7_2:6810331-6810350 Msa1046350:intron 35.0%
AACTAGGGTTAGAACTGATT+AGG - chr7_2:6810460-6810479 Msa1046350:intron 35.0%
CTAAATTCCGTTGAAGAACA+AGG - chr7_2:6810495-6810514 Msa1046350:intron 35.0%
!! GCATTTGCTTTTGTACACTT+TGG - chr7_2:6810584-6810603 Msa1046350:intron 35.0%
TGTTCAAAGTTCAACCAGTT+TGG + chr7_2:6810854-6810873 None:intergenic 35.0%
TTTAGTACACTCTGCTTTCA+TGG - chr7_2:6810881-6810900 Msa1046350:intron 35.0%
! TTTGATAATTAGGCAAGCGA+TGG + chr7_2:6810987-6811006 None:intergenic 35.0%
AGAAGATGAACAACCTTCTT+GGG - chr7_2:6811053-6811072 Msa1046350:intron 35.0%
CAAGTTCGAGAATAAAGGAT+TGG - chr7_2:6811103-6811122 Msa1046350:intron 35.0%
TCATCATATTGCTTAACTGC+AGG - chr7_2:6811191-6811210 Msa1046350:intron 35.0%
CATCATATTGCTTAACTGCA+GGG - chr7_2:6811192-6811211 Msa1046350:intron 35.0%
ATGGAATTGGAGAAACTTGA+TGG - chr7_2:6811343-6811362 Msa1046350:intron 35.0%
CATCCAATTAATCGAAAGCT+TGG - chr7_2:6811536-6811555 Msa1046350:intron 35.0%
! TTGATTTTGTGGTAGGGTAT+TGG - chr7_2:6811613-6811632 Msa1046350:intron 35.0%
AGAAACAATACAATGCGGAA+TGG - chr7_2:6811694-6811713 Msa1046350:intron 35.0%
AACATCATTCCTCACAAACT+GGG + chr7_2:6811761-6811780 None:intergenic 35.0%
GTCTCTGATGGAATTGTTAA+AGG + chr7_2:6811857-6811876 None:intergenic 35.0%
TAGAATTGTGAAGTCTCTGA+TGG + chr7_2:6811869-6811888 None:intergenic 35.0%
CAAATAACTTCACTGATGGA+GGG + chr7_2:6811927-6811946 None:intergenic 35.0%
TCAAATAACTTCACTGATGG+AGG + chr7_2:6811928-6811947 None:intergenic 35.0%
!! CATTTTAACCATTGGAGATG+AGG + chr7_2:6811957-6811976 None:intergenic 35.0%
! GATTCTGAAGGTAATTGCAA+AGG - chr7_2:6812038-6812057 Msa1046350:intron 35.0%
!! TTGCTCTACAAATTTTAGCC+TGG + chr7_2:6812100-6812119 None:intergenic 35.0%
!!! GTTACGCATATTTTTAGGGA+AGG - chr7_2:6812284-6812303 Msa1046350:intron 35.0%
!! CACTAGACACTTTTGTTTAC+TGG - chr7_2:6812344-6812363 Msa1046350:intron 35.0%
! CTAGTATACCTTTGTTTGCT+AGG - chr7_2:6812368-6812387 Msa1046350:intron 35.0%
TATGATTCCCTAGCAAACAA+AGG + chr7_2:6812379-6812398 None:intergenic 35.0%
! TCTTCTCATTGTGGAAGTTT+TGG - chr7_2:6812436-6812455 Msa1046350:intron 35.0%
CAAACGTAGCATATACGATA+TGG + chr7_2:6812795-6812814 None:intergenic 35.0%
! TTGTTCCTTTTCAACCAAAC+AGG + chr7_2:6813143-6813162 None:intergenic 35.0%
TGTTTGGTTGAAAAGGAACA+AGG - chr7_2:6813142-6813161 Msa1046350:intron 35.0%
AGAAATAGAGAAGAGAGAAC+AGG - chr7_2:6813185-6813204 Msa1046350:intron 35.0%
GAGAACAGGTTTCTTTAGTT+TGG - chr7_2:6813199-6813218 Msa1046350:intron 35.0%
!! CAGGTTTCTTTAGTTTGGAA+TGG - chr7_2:6813204-6813223 Msa1046350:intron 35.0%
! AGTTTGGAATGGAGAGAAAA+AGG - chr7_2:6813215-6813234 Msa1046350:intron 35.0%
CGAAGATTGCTAAAAGCAAT+GGG + chr7_2:6813266-6813285 None:intergenic 35.0%
TTTAGCAATCTTCGCTCATT+AGG - chr7_2:6813272-6813291 Msa1046350:intron 35.0%
TTAGCAATCTTCGCTCATTA+GGG - chr7_2:6813273-6813292 Msa1046350:intron 35.0%
CTCATTAGGGAAGAAATGAA+GGG - chr7_2:6813286-6813305 Msa1046350:intron 35.0%
TTAGAAGAAAAGGGCGAAAT+TGG + chr7_2:6813336-6813355 None:intergenic 35.0%
GAAAATGAGAAGAGAGAAAG+AGG + chr7_2:6813865-6813884 None:intergenic 35.0%
GTATATACTTAGGGTGTGTT+TGG + chr7_2:6813897-6813916 None:intergenic 35.0%
ACACCCTAAGTATATACGTA+GGG - chr7_2:6813900-6813919 Msa1046350:intron 35.0%
TCTCCCTACGTATATACTTA+GGG + chr7_2:6813906-6813925 None:intergenic 35.0%
TGATTTCAATATGTTTGGCC+AGG + chr7_2:6813974-6813993 None:intergenic 35.0%
AGGGTTTGGAGAAATGAAAA+TGG + chr7_2:6814054-6814073 None:intergenic 35.0%
!! ATTTTCTAGGGATTAGGGTT+TGG + chr7_2:6814068-6814087 None:intergenic 35.0%
ATGTTAGGGTTGTTACCATT+CGG + chr7_2:6814112-6814131 None:intergenic 35.0%
CTGTTGGATTTCTTGATGTT+AGG + chr7_2:6814127-6814146 None:intergenic 35.0%
AAACCATTGTGCTATCCATT+TGG - chr7_2:6814301-6814320 Msa1046350:intron 35.0%
AACCATTGTGCTATCCATTT+GGG - chr7_2:6814302-6814321 Msa1046350:intron 35.0%
TATCCATTTGGGTATCCATT+TGG - chr7_2:6814313-6814332 Msa1046350:intron 35.0%
ATCCATTTGGGTATCCATTT+GGG - chr7_2:6814314-6814333 Msa1046350:intron 35.0%
GAGAACCTGATGTTTATAAC+AGG - chr7_2:6814383-6814402 Msa1046350:intron 35.0%
ATACAAGTTAGGAACAAGGA+AGG + chr7_2:6814440-6814459 None:intergenic 35.0%
!! GGAATTTGCTGGAATTAAAG+AGG - chr7_2:6814650-6814669 Msa1046350:intron 35.0%
CTCTGATATCCCAAATCATT+TGG - chr7_2:6814674-6814693 Msa1046350:intron 35.0%
GTATGAAGATTCCAAAGATG+AGG - chr7_2:6814725-6814744 Msa1046350:intron 35.0%
TGGAATCTTCATACCATCTA+AGG - chr7_2:6814770-6814789 Msa1046350:intron 35.0%
CTCAGATATCCCAAATCATT+TGG + chr7_2:6814815-6814834 None:intergenic 35.0%
!! GGAATTTGCTGGAATTAAAG+AGG + chr7_2:6814650-6814669 None:intergenic 35.0%
CAGAAACATGTACATCAATC+TGG - chr7_2:6815181-6815200 Msa1046350:intron 35.0%
TGGCCAAAAAGATATTGTTG+AGG - chr7_2:6815201-6815220 Msa1046350:intron 35.0%
! GTTGATTCTTAAGTAGAAGG+GGG + chr7_2:6815429-6815448 None:intergenic 35.0%
TTATCGAGATATTGTTCGCT+TGG + chr7_2:6815491-6815510 None:intergenic 35.0%
! CAGTGTATCAAATTTGAGGT+CGG - chr7_2:6815513-6815532 Msa1046350:five_prime_UTR 35.0%
! TTTCTTGTGACCTTTAGAAG+TGG - chr7_2:6815592-6815611 Msa1046350:intron 35.0%
AATCACCTATCCACTTCTAA+AGG + chr7_2:6815605-6815624 None:intergenic 35.0%
TTAGAAGTGGATAGGTGATT+AGG - chr7_2:6815605-6815624 Msa1046350:intron 35.0%
!!! CTGCTATTTTGCTACATGTT+TGG - chr7_2:6815670-6815689 Msa1046350:intron 35.0%
TTATTTGCACTTCTTGTGCT+TGG - chr7_2:6815743-6815762 Msa1046350:intron 35.0%
TATTTGCACTTCTTGTGCTT+GGG - chr7_2:6815744-6815763 Msa1046350:intron 35.0%
AACTGAGTATGCAAATGAGA+TGG - chr7_2:6815999-6816018 Msa1046350:five_prime_UTR 35.0%
GTTGTAGAACCTTAACATGT+AGG - chr7_2:6816116-6816135 Msa1046350:intron 35.0%
CTCACATAAATGTGAGGTTA+AGG + chr7_2:6816163-6816182 None:intergenic 35.0%
! CTTTCCAACAGTTTCTAGAA+AGG - chr7_2:6816290-6816309 Msa1046350:five_prime_UTR 35.0%
! TTCCAACAGTTTCTAGAAAG+GGG - chr7_2:6816292-6816311 Msa1046350:five_prime_UTR 35.0%
TCTTAAATCATTGGGACATG+TGG - chr7_2:6816381-6816400 Msa1046350:five_prime_UTR 35.0%
AACTATTATCAGTACCCCTA+AGG - chr7_2:6816482-6816501 Msa1046350:five_prime_UTR 35.0%
! AAATTTTGCTGCTCAATTGC+TGG - chr7_2:6816739-6816758 Msa1046350:intron 35.0%
ATGTTAATGGTGCAAGCTAA+CGG - chr7_2:6816860-6816879 Msa1046350:intron 35.0%
AATGTTTGAACATCTTCCTG+TGG - chr7_2:6816983-6817002 Msa1046350:intron 35.0%
GTAACCAAGTTCAGGAGAAA+TGG + chr7_2:6807755-6807774 None:intergenic 40.0%
GAAACGAAGTAACCAAGTTC+AGG + chr7_2:6807763-6807782 None:intergenic 40.0%
!! CGTTTCTGAAATCACTCCAA+AGG - chr7_2:6807777-6807796 Msa1046350:three_prime_UTR 40.0%
TCAATCGAAGCTCTTACCTT+TGG + chr7_2:6807796-6807815 None:intergenic 40.0%
! GAAAGAGGAAGTTTGGTAGT+AGG - chr7_2:6808176-6808195 Msa1046350:intron 40.0%
! AAGTTTGGTAGTAGGAACCA+AGG - chr7_2:6808184-6808203 Msa1046350:intron 40.0%
!!! CTTTTGGTTTTTTACGGCCT+TGG + chr7_2:6808204-6808223 None:intergenic 40.0%
AGGCCGTAAAAAACCAAAAG+TGG - chr7_2:6808204-6808223 Msa1046350:intron 40.0%
TTTCACCAAAAAACACCACG+AGG - chr7_2:6808372-6808391 Msa1046350:intron 40.0%
! GAGTGTTTCTGATGACTTCT+TGG - chr7_2:6808583-6808602 Msa1046350:intron 40.0%
TGATGACTTCTTGGTAAGCT+AGG - chr7_2:6808592-6808611 Msa1046350:intron 40.0%
GGCAAAAAAGGAAAAGCTGA+TGG - chr7_2:6808775-6808794 Msa1046350:intron 40.0%
CTTGTTACAGCTTGCAGAAA+AGG - chr7_2:6808915-6808934 Msa1046350:intron 40.0%
TGCGAGTCCAAATAATTAGC+AGG + chr7_2:6808952-6808971 None:intergenic 40.0%
ATAAGTGTAGCGACAAAAGG+AGG - chr7_2:6808985-6809004 Msa1046350:intron 40.0%
GTTCTATATACACCTGTTGC+AGG - chr7_2:6809233-6809252 Msa1046350:intron 40.0%
ATGCATCCCTATTCTTTGAG+GGG + chr7_2:6809293-6809312 None:intergenic 40.0%
CTATGCATCCCTATTCTTTG+AGG + chr7_2:6809295-6809314 None:intergenic 40.0%
CTCAAAGAATAGGGATGCAT+AGG - chr7_2:6809293-6809312 Msa1046350:intron 40.0%
AATAGGTCATATGCAGCTCA+CGG + chr7_2:6809537-6809556 None:intergenic 40.0%
TGAGCTGCATATGACCTATT+TGG - chr7_2:6809537-6809556 Msa1046350:intron 40.0%
GAGCTGCATATGACCTATTT+GGG - chr7_2:6809538-6809557 Msa1046350:intron 40.0%
ATATGACCTATTTGGGCCTT+TGG - chr7_2:6809545-6809564 Msa1046350:intron 40.0%
AGATGCTACAACAACCAGTA+TGG + chr7_2:6809571-6809590 None:intergenic 40.0%
CTGGTTGTTGTAGCATCTAT+AGG - chr7_2:6809573-6809592 Msa1046350:intron 40.0%
!! TTTTAAAGAGGCAGCATGTG+AGG - chr7_2:6809823-6809842 Msa1046350:intron 40.0%
AACACCAAAAGTCTGCTATG+TGG + chr7_2:6809974-6809993 None:intergenic 40.0%
! TGGTTCTATTTGGAAGAGCA+TGG + chr7_2:6810166-6810185 None:intergenic 40.0%
TGAAACTGAGAACTCTGACA+GGG + chr7_2:6810190-6810209 None:intergenic 40.0%
CACTGAAAAGAAGGCTTCTT+TGG + chr7_2:6810328-6810347 None:intergenic 40.0%
! GAAGCCTTCTTTTCAGTGTT+AGG - chr7_2:6810330-6810349 Msa1046350:intron 40.0%
CTTCCCTAACACTGAAAAGA+AGG + chr7_2:6810337-6810356 None:intergenic 40.0%
TGTAACAATCACCTTTGCAG+AGG + chr7_2:6810373-6810392 None:intergenic 40.0%
AATTCCGTTGAAGAACAAGG+AGG - chr7_2:6810498-6810517 Msa1046350:intron 40.0%
AAACAAGTGTTCCTTGAACG+AGG - chr7_2:6810953-6810972 Msa1046350:intron 40.0%
TGGAAGTTATACCTCGTTCA+AGG + chr7_2:6810967-6810986 None:intergenic 40.0%
! TGCTTGGATTTTGGATATGC+AGG - chr7_2:6811008-6811027 Msa1046350:intron 40.0%
GAGAAGATGAACAACCTTCT+TGG - chr7_2:6811052-6811071 Msa1046350:intron 40.0%
GCTGACAAGTTCGAGAATAA+AGG - chr7_2:6811098-6811117 Msa1046350:intron 40.0%
TATGATGAGTACAAGGTAGC+AGG + chr7_2:6811179-6811198 None:intergenic 40.0%
! GAAACTTGAAAAGGGTGCAT+TGG - chr7_2:6811248-6811267 Msa1046350:intron 40.0%
! GGAGAAACTTGATGGATGAT+TGG - chr7_2:6811351-6811370 Msa1046350:intron 40.0%
ACATACATTCTCGAGCTTGA+GGG + chr7_2:6811730-6811749 None:intergenic 40.0%
AACATACATTCTCGAGCTTG+AGG + chr7_2:6811731-6811750 None:intergenic 40.0%
CAACATCATTCCTCACAAAC+TGG + chr7_2:6811762-6811781 None:intergenic 40.0%
GGAATGATGTTGAAAGTTGC+AGG - chr7_2:6811770-6811789 Msa1046350:intron 40.0%
TTGAAAGTTGCAGGTTCAAG+AGG - chr7_2:6811779-6811798 Msa1046350:intron 40.0%
TGTATGATTGCATGATAGGG+AGG + chr7_2:6811827-6811846 None:intergenic 40.0%
TTTAACCATTGGAGATGAGG+AGG + chr7_2:6811954-6811973 None:intergenic 40.0%
GCAATTACCTTCAGAATCTC+TGG + chr7_2:6812036-6812055 None:intergenic 40.0%
! AGGTTGCTATGCTGAGTTTT+TGG - chr7_2:6812058-6812077 Msa1046350:intron 40.0%
! GGTTGCTATGCTGAGTTTTT+GGG - chr7_2:6812059-6812078 Msa1046350:intron 40.0%
GGGTTTATCTACTTCTTACC+AGG - chr7_2:6812079-6812098 Msa1046350:intron 40.0%
ATGTATTCCTAACCTGCCAA+GGG + chr7_2:6812223-6812242 None:intergenic 40.0%
TGTTAAGCCAAAGTTTGCAG+GGG + chr7_2:6812326-6812345 None:intergenic 40.0%
GTGTTAAGCCAAAGTTTGCA+GGG + chr7_2:6812327-6812346 None:intergenic 40.0%
AGTGTTAAGCCAAAGTTTGC+AGG + chr7_2:6812328-6812347 None:intergenic 40.0%
! AGTTTTGCAAAATTCAGGGG+AGG + chr7_2:6812861-6812880 None:intergenic 40.0%
ACAAGAACTAATGGCCTGTT+TGG - chr7_2:6813126-6813145 Msa1046350:intron 40.0%
AATGGCCTGTTTGGTTGAAA+AGG - chr7_2:6813135-6813154 Msa1046350:intron 40.0%
AGGAGAGAGAGATACAAAAG+TGG - chr7_2:6813235-6813254 Msa1046350:intron 40.0%
AGAGAGAGATACAAAAGTGG+TGG - chr7_2:6813238-6813257 Msa1046350:intron 40.0%
GAGAGAGATACAAAAGTGGT+GGG - chr7_2:6813239-6813258 Msa1046350:intron 40.0%
GCGAAGATTGCTAAAAGCAA+TGG + chr7_2:6813267-6813286 None:intergenic 40.0%
GCTCATTAGGGAAGAAATGA+AGG - chr7_2:6813285-6813304 Msa1046350:intron 40.0%
CACACCCTAAGTATATACGT+AGG - chr7_2:6813899-6813918 Msa1046350:intron 40.0%
GTCTCCCTACGTATATACTT+AGG + chr7_2:6813907-6813926 None:intergenic 40.0%
AATCAATACGCACACGAGAA+AGG - chr7_2:6813989-6814008 Msa1046350:intron 40.0%
ATCAATACGCACACGAGAAA+GGG - chr7_2:6813990-6814009 Msa1046350:intron 40.0%
TGTTAGGGTTGTTACCATTC+GGG + chr7_2:6814111-6814130 None:intergenic 40.0%
GAGAGAGTAGAAAATGCTGT+TGG + chr7_2:6814143-6814162 None:intergenic 40.0%
TACCCAAATGGATAGCACAA+TGG + chr7_2:6814307-6814326 None:intergenic 40.0%
TTCCCAAATGGATACCCAAA+TGG + chr7_2:6814319-6814338 None:intergenic 40.0%
TCGATATGGAACGCTTCTAT+TGG - chr7_2:6814628-6814647 Msa1046350:intron 40.0%
CGATATGGAACGCTTCTATT+GGG - chr7_2:6814629-6814648 Msa1046350:intron 40.0%
TCATGGAAGCTATGCTTAGA+TGG - chr7_2:6814703-6814722 Msa1046350:intron 40.0%
TGAAGATTCCAAAGATGAGG+AGG - chr7_2:6814728-6814747 Msa1046350:intron 40.0%
GAAGATTCCAAAGATGAGGA+GGG - chr7_2:6814729-6814748 Msa1046350:intron 40.0%
!! GGAAAGTGTCTTCTCATCTT+TGG - chr7_2:6814750-6814769 Msa1046350:intron 40.0%
TCATGGAAGCTATCCTTAGA+TGG + chr7_2:6814786-6814805 None:intergenic 40.0%
! TCCATCGCTACAAACTTTTC+CGG - chr7_2:6814924-6814943 Msa1046350:intron 40.0%
!! TTAAGGGGAAGCATCTTCTT+AGG + chr7_2:6815102-6815121 None:intergenic 40.0%
! TGATGTACATGTTTCTGCAG+AGG + chr7_2:6815178-6815197 None:intergenic 40.0%
CACAGTTCATCAATCATCAC+TGG + chr7_2:6815258-6815277 None:intergenic 40.0%
! TGTGACCTTTAGAAGTGGAT+AGG - chr7_2:6815597-6815616 Msa1046350:intron 40.0%
AAGTGGATAGGTGATTAGGT+AGG - chr7_2:6815609-6815628 Msa1046350:intron 40.0%
AGTGGATAGGTGATTAGGTA+GGG - chr7_2:6815610-6815629 Msa1046350:intron 40.0%
ATTTGCACTTCTTGTGCTTG+GGG - chr7_2:6815745-6815764 Msa1046350:intron 40.0%
TAAGCAGAAAAGCTAAGCAG+CGG + chr7_2:6815826-6815845 None:intergenic 40.0%
TTATCAGTACCCCTAAGGAT+TGG - chr7_2:6816487-6816506 Msa1046350:five_prime_UTR 40.0%
TATCAGTACCCCTAAGGATT+GGG - chr7_2:6816488-6816507 Msa1046350:five_prime_UTR 40.0%
! TTATTTGTTGCCCATGCTTC+AGG - chr7_2:6816887-6816906 Msa1046350:intron 40.0%
GATAACTGTTCCTGAAGCAT+GGG + chr7_2:6816900-6816919 None:intergenic 40.0%
TGATAACTGTTCCTGAAGCA+TGG + chr7_2:6816901-6816920 None:intergenic 40.0%
TCAGGAACAGTTATCAGATC+AGG - chr7_2:6816905-6816924 Msa1046350:intron 40.0%
TCAGATCAGGAAGAGAAGAA+AGG - chr7_2:6816918-6816937 Msa1046350:intron 40.0%
GTTTGAACATCTTCCTGTGT+TGG - chr7_2:6817051-6817070 Msa1046350:five_prime_UTR 40.0%
CAAACAATTCATGGCGCAAG+TGG - chr7_2:6808132-6808151 Msa1046350:intron 45.0%
AGTGGTTGAACATGGAAGTG+AGG - chr7_2:6808150-6808169 Msa1046350:intron 45.0%
GTTGAACATGGAAGTGAGGT+GGG - chr7_2:6808154-6808173 Msa1046350:intron 45.0%
ACTTTATTCTGTCCGTGTGG+TGG + chr7_2:6808235-6808254 None:intergenic 45.0%
!!! TTCCTCCTCGTGGTGTTTTT+TGG + chr7_2:6808380-6808399 None:intergenic 45.0%
TCAGAAGATGAAAGAGCAGC+AGG - chr7_2:6808406-6808425 Msa1046350:CDS 45.0%
TTCTTGTGGTCTGACAGTAC+TGG + chr7_2:6808701-6808720 None:intergenic 45.0%
TGTAGAAAAGCTTGCGGAAG+AGG - chr7_2:6808727-6808746 Msa1046350:intron 45.0%
!! GTGTTTTGTTGACCTGCAAC+AGG + chr7_2:6809248-6809267 None:intergenic 45.0%
ATAGCGGCTCTTTAGCATAG+AGG - chr7_2:6809487-6809506 Msa1046350:intron 45.0%
ACAACAACCAGTATGGCCAA+AGG + chr7_2:6809564-6809583 None:intergenic 45.0%
TTGTCCTCCTCTTCCATTTC+CGG - chr7_2:6809771-6809790 Msa1046350:intron 45.0%
AAATAAGAGGGGTTGGGACT+TGG - chr7_2:6810138-6810157 Msa1046350:intron 45.0%
AATAAGAGGGGTTGGGACTT+GGG - chr7_2:6810139-6810158 Msa1046350:intron 45.0%
! CTGACAGGGATGGTTCTATT+TGG + chr7_2:6810176-6810195 None:intergenic 45.0%
GTGAAACTGAGAACTCTGAC+AGG + chr7_2:6810191-6810210 None:intergenic 45.0%
GTGTTAGGGAAGCCAACTAT+TGG - chr7_2:6810345-6810364 Msa1046350:intron 45.0%
!! TTTGCAGAGGTGCCAATAGT+TGG + chr7_2:6810360-6810379 None:intergenic 45.0%
AACTATTGGCACCTCTGCAA+AGG - chr7_2:6810359-6810378 Msa1046350:intron 45.0%
TGGTCCTCCTTGTTCTTCAA+CGG + chr7_2:6810505-6810524 None:intergenic 45.0%
GTACACTCTGCTTTCATGGA+AGG - chr7_2:6810885-6810904 Msa1046350:intron 45.0%
!! TGCATTGGCGTGTTTCTAGT+GGG - chr7_2:6811263-6811282 Msa1046350:intron 45.0%
!! CGTGTTTCTAGTGGGACAAT+CGG - chr7_2:6811271-6811290 Msa1046350:intron 45.0%
TTGAGAGTTCCCAGTTTGTG+AGG - chr7_2:6811749-6811768 Msa1046350:intron 45.0%
AGTTGCAGGTTCAAGAGGTT+TGG - chr7_2:6811784-6811803 Msa1046350:intron 45.0%
AAGCCCAGTACTTCTTCTTG+TGG - chr7_2:6812002-6812021 Msa1046350:intron 45.0%
!! CCTCCACAAGAAGAAGTACT+GGG + chr7_2:6812008-6812027 None:intergenic 45.0%
GGCATTTCCAGAGATTCTGA+AGG - chr7_2:6812026-6812045 Msa1046350:intron 45.0%
AGAACTCTAGCCATATCCCT+TGG - chr7_2:6812204-6812223 Msa1046350:intron 45.0%
CATGTATTCCTAACCTGCCA+AGG + chr7_2:6812224-6812243 None:intergenic 45.0%
GTGGATGAAGATAACGAGAG+AGG - chr7_2:6812532-6812551 Msa1046350:intron 45.0%
TAACTGTCACGTCAGCATGT+TGG + chr7_2:6812953-6812972 None:intergenic 45.0%
! GCATGTCTTTTCTGACCATG+TGG + chr7_2:6812993-6813012 None:intergenic 45.0%
AAAAGACATGCCACGTCACA+TGG - chr7_2:6813002-6813021 Msa1046350:intron 45.0%
AAAGACATGCCACGTCACAT+GGG - chr7_2:6813003-6813022 Msa1046350:intron 45.0%
GGGAAGAAATGAAGGGAGAA+AGG - chr7_2:6813293-6813312 Msa1046350:intron 45.0%
GAAAGAGGTGAGAGAGAGTA+TGG + chr7_2:6813850-6813869 None:intergenic 45.0%
TCAATACGCACACGAGAAAG+GGG - chr7_2:6813991-6814010 Msa1046350:intron 45.0%
TCTCATCAGAAGAACCCGAA+TGG - chr7_2:6814094-6814113 Msa1046350:intron 45.0%
TCAGTTTCCGTTCATCTCAG+TGG - chr7_2:6814215-6814234 Msa1046350:intron 45.0%
TTCCGTTCATCTCAGTGGTT+CGG - chr7_2:6814220-6814239 Msa1046350:intron 45.0%
ATCCGAACCACTGAGATGAA+CGG + chr7_2:6814225-6814244 None:intergenic 45.0%
! TCATCTCAGTGGTTCGGATT+CGG - chr7_2:6814226-6814245 Msa1046350:intron 45.0%
!! AGAACAAACCTGGAAGCGTT+CGG - chr7_2:6814261-6814280 Msa1046350:intron 45.0%
CCACTCAACTCTTTCCCAAA+TGG + chr7_2:6814331-6814350 None:intergenic 45.0%
CCATTTGGGAAAGAGTTGAG+TGG - chr7_2:6814328-6814347 Msa1046350:intron 45.0%
TCAAACAGGTACGAGAGATC+CGG - chr7_2:6814542-6814561 Msa1046350:intron 45.0%
GAGAGATCCGGAAAAGTTTG+TGG - chr7_2:6814554-6814573 Msa1046350:intron 45.0%
! TCCAACGCCACAAACTTTTC+CGG + chr7_2:6814564-6814583 None:intergenic 45.0%
! TGATGGACGTGACTTCGATA+TGG - chr7_2:6814614-6814633 Msa1046350:intron 45.0%
CGCTTCTATTGGGAATTTGC+TGG - chr7_2:6814639-6814658 Msa1046350:intron 45.0%
ACACTTTCCCTCCTCATCTT+TGG + chr7_2:6814739-6814758 None:intergenic 45.0%
CGCTTCTATTGGGAATTTGC+TGG + chr7_2:6814639-6814658 None:intergenic 45.0%
CGACATGGAACGCTTCTATT+GGG + chr7_2:6814860-6814879 None:intergenic 45.0%
TCGACATGGAACGCTTCTAT+TGG + chr7_2:6814861-6814880 None:intergenic 45.0%
GGAAAAGTTTGTAGCGATGG+AGG + chr7_2:6814925-6814944 None:intergenic 45.0%
TCCGGAAAAGTTTGTAGCGA+TGG + chr7_2:6814928-6814947 None:intergenic 45.0%
TCAAACAGGTACGAGAGATC+CGG + chr7_2:6814542-6814561 None:intergenic 45.0%
! TCGTACCTGTTTGAAAGCGT+GGG - chr7_2:6814952-6814971 Msa1046350:intron 45.0%
GTATACCCACGCTTTCAAAC+AGG + chr7_2:6814960-6814979 None:intergenic 45.0%
! TTGTTCGCTTGGCTTGAAGT+TGG + chr7_2:6815480-6815499 None:intergenic 45.0%
AAGCAGAAAAGCTAAGCAGC+GGG + chr7_2:6815825-6815844 None:intergenic 45.0%
TGCATCATCTGCTTCTGCTT+TGG - chr7_2:6816044-6816063 Msa1046350:five_prime_UTR 45.0%
TGAAACGTGGAAGTAGGTTG+AGG + chr7_2:6816259-6816278 None:intergenic 45.0%
TCAAGCTGAAACGTGGAAGT+AGG + chr7_2:6816265-6816284 None:intergenic 45.0%
! AGCTGTTTCAAGCTGAAACG+TGG + chr7_2:6816272-6816291 None:intergenic 45.0%
! CAACAGTTTCTAGAAAGGGG+CGG - chr7_2:6816295-6816314 Msa1046350:five_prime_UTR 45.0%
ATTGGGACATGTGGAGAACA+AGG - chr7_2:6816390-6816409 Msa1046350:five_prime_UTR 45.0%
TTTGTACCGCCCAATCCTTA+GGG + chr7_2:6816500-6816519 None:intergenic 45.0%
! TTTTGTACCGCCCAATCCTT+AGG + chr7_2:6816501-6816520 None:intergenic 45.0%
GGGCGGTACAAAACTAATTG+TGG - chr7_2:6816508-6816527 Msa1046350:five_prime_UTR 45.0%
! CAATTTTGCACAGTCCTCAG+GGG + chr7_2:6816597-6816616 None:intergenic 45.0%
! CCAATTTTGCACAGTCCTCA+GGG + chr7_2:6816598-6816617 None:intergenic 45.0%
! ACCAATTTTGCACAGTCCTC+AGG + chr7_2:6816599-6816618 None:intergenic 45.0%
TGAGGACTGTGCAAAATTGG+TGG - chr7_2:6816598-6816617 Msa1046350:five_prime_UTR 45.0%
GTTTGAACATCTTCCTGTGG+TGG - chr7_2:6816986-6817005 Msa1046350:intron 45.0%
!! TCAATAATTATATAATTATA+AGG + chr7_2:6810117-6810136 None:intergenic 5.0%
!!! TATTATTTTCTTTTTTTATT+AGG - chr7_2:6810783-6810802 Msa1046350:intron 5.0%
!!! ATTTTTTTTTTATCAATTTA+AGG + chr7_2:6813644-6813663 None:intergenic 5.0%
!!! TAAATTTTATAAAATCTAAT+TGG + chr7_2:6813688-6813707 None:intergenic 5.0%
!! AGAAATAAATAAAATTAATA+TGG + chr7_2:6816835-6816854 None:intergenic 5.0%
! GCGCTGCATCATGTGTTGTT+TGG + chr7_2:6807733-6807752 None:intergenic 50.0%
AGCGCCATTTCTCCTGAACT+TGG - chr7_2:6807748-6807767 Msa1046350:three_prime_UTR 50.0%
TGTCACACACGAAAACAGGC+AGG + chr7_2:6808082-6808101 None:intergenic 50.0%
ATGGCGCAAGTGGTTGAACA+TGG - chr7_2:6808142-6808161 Msa1046350:intron 50.0%
GGTTGAACATGGAAGTGAGG+TGG - chr7_2:6808153-6808172 Msa1046350:intron 50.0%
ATGGAAGTGAGGTGGGAAAG+AGG - chr7_2:6808161-6808180 Msa1046350:intron 50.0%
GAGGTGGGAAAGAGGAAGTT+TGG - chr7_2:6808169-6808188 Msa1046350:intron 50.0%
! TGTGGTGGCTTCACCACTTT+TGG + chr7_2:6808220-6808239 None:intergenic 50.0%
AAAGTGGTGAAGCCACCACA+CGG - chr7_2:6808220-6808239 Msa1046350:intron 50.0%
TATACTCACGTGCTCGCTTG+TGG + chr7_2:6808288-6808307 None:intergenic 50.0%
AGACAACTGCCCCTGCTATA+TGG - chr7_2:6808326-6808345 Msa1046350:intron 50.0%
CACCAAAAAACACCACGAGG+AGG - chr7_2:6808375-6808394 Msa1046350:intron 50.0%
GGTCAAGGGAGAGGCAAAAA+AGG - chr7_2:6808763-6808782 Msa1046350:intron 50.0%
ACAAGTTGCTCAGAAAGGGC+TGG - chr7_2:6809266-6809285 Msa1046350:intron 50.0%
GCTGGACCCCTCAAAGAATA+GGG - chr7_2:6809284-6809303 Msa1046350:intron 50.0%
GTATGGCCAAAGGCCCAAAT+AGG + chr7_2:6809554-6809573 None:intergenic 50.0%
ATTTGGGCCTTTGGCCATAC+TGG - chr7_2:6809554-6809573 Msa1046350:intron 50.0%
TTCATCCTCCTCACCGGAAA+TGG + chr7_2:6809787-6809806 None:intergenic 50.0%
GAAAGGTTCATCCTCCTCAC+CGG + chr7_2:6809793-6809812 None:intergenic 50.0%
ACTGAGAACTCTGACAGGGA+TGG + chr7_2:6810186-6810205 None:intergenic 50.0%
GCCAATGCAAGCACAAGCAA+GGG - chr7_2:6811030-6811049 Msa1046350:intron 50.0%
TCCCTTGCTTGTGCTTGCAT+TGG + chr7_2:6811034-6811053 None:intergenic 50.0%
! TCTCGTAATGGAGCCCAAGA+AGG + chr7_2:6811069-6811088 None:intergenic 50.0%
!! GTGCATTGGCGTGTTTCTAG+TGG - chr7_2:6811262-6811281 Msa1046350:intron 50.0%
! ATGGATGATTGGCTGTCCGT+TGG - chr7_2:6811362-6811381 Msa1046350:intron 50.0%
GATAGCCTCCTCATCTCCAA+TGG - chr7_2:6811946-6811965 Msa1046350:intron 50.0%
CCCAGTACTTCTTCTTGTGG+AGG - chr7_2:6812005-6812024 Msa1046350:intron 50.0%
! GCCTCCACAAGAAGAAGTAC+TGG + chr7_2:6812009-6812028 None:intergenic 50.0%
TCCTAACCTGCCAAGGGATA+TGG + chr7_2:6812217-6812236 None:intergenic 50.0%
AGGGAAGGAAACCAAGTCGT+TGG - chr7_2:6812299-6812318 Msa1046350:intron 50.0%
CGTGACAGTTAACTGCAACG+TGG - chr7_2:6812962-6812981 Msa1046350:intron 50.0%
AAGACATGCCACGTCACATG+GGG - chr7_2:6813004-6813023 Msa1046350:intron 50.0%
GTCAATTACCCCATGTGACG+TGG + chr7_2:6813015-6813034 None:intergenic 50.0%
GGTTCGGATTCGGATTCGAT+CGG - chr7_2:6814236-6814255 Msa1046350:intron 50.0%
TCGATCGGTCAGAACAAACC+TGG - chr7_2:6814251-6814270 Msa1046350:intron 50.0%
AATTCGATCCGAACGCTTCC+AGG + chr7_2:6814272-6814291 None:intergenic 50.0%
!! TGGAAGCGTTCGGATCGAAT+TGG - chr7_2:6814271-6814290 Msa1046350:intron 50.0%
! GGGAAAGAGTTGAGTGGACT+CGG - chr7_2:6814334-6814353 Msa1046350:intron 50.0%
! GGAAAGAGTTGAGTGGACTC+GGG - chr7_2:6814335-6814354 Msa1046350:intron 50.0%
GTATACCCGCGCTTTCAAAC+AGG - chr7_2:6814528-6814547 Msa1046350:intron 50.0%
! TCGTACCTGTTTGAAAGCGC+GGG + chr7_2:6814536-6814555 None:intergenic 50.0%
CTCGTACCTGTTTGAAAGCG+CGG + chr7_2:6814951-6814970 None:intergenic 50.0%
TCCGGAAAAGTTTGTGGCGT+TGG - chr7_2:6814560-6814579 Msa1046350:intron 50.0%
! GGAAAAGTTTGTGGCGTTGG+AGG - chr7_2:6814563-6814582 Msa1046350:intron 50.0%
! TGATGGACGTGACTTCGACA+TGG + chr7_2:6814875-6814894 None:intergenic 50.0%
! GACATCGATTGGAGTGGTGA+TGG + chr7_2:6814892-6814911 None:intergenic 50.0%
CACCACTCCAATCGATGTCA+CGG - chr7_2:6814893-6814912 Msa1046350:intron 50.0%
CTCGTACCTGTTTGAAAGCG+TGG - chr7_2:6814951-6814970 Msa1046350:intron 50.0%
AAGTAGAAGGGGGAAGTCAG+AGG + chr7_2:6815419-6815438 None:intergenic 50.0%
GGATAGGTGATTAGGTAGGG+TGG - chr7_2:6815613-6815632 Msa1046350:intron 50.0%
TAGGTGATTAGGTAGGGTGG+TGG - chr7_2:6815616-6815635 Msa1046350:intron 50.0%
! TGATTAGGTAGGGTGGTGGT+TGG - chr7_2:6815620-6815639 Msa1046350:intron 50.0%
! CGCCCCTTTCTAGAAACTGT+TGG + chr7_2:6816297-6816316 None:intergenic 50.0%
! AGAAAGGGGCGGTGTCAAAT+TGG - chr7_2:6816306-6816325 Msa1046350:five_prime_UTR 50.0%
TTGTACCGCCCAATCCTTAG+GGG + chr7_2:6816499-6816518 None:intergenic 50.0%
! TAAATGACAGAGCACCCCTG+AGG - chr7_2:6816580-6816599 Msa1046350:five_prime_UTR 50.0%
CCCTGAGGACTGTGCAAAAT+TGG - chr7_2:6816595-6816614 Msa1046350:five_prime_UTR 50.0%
TCTATGTGCAGAGAGCAAGC+AGG - chr7_2:6816632-6816651 Msa1046350:five_prime_UTR 50.0%
CATGCATACCTCAGCTGGTT+GGG + chr7_2:6816669-6816688 None:intergenic 50.0%
! TTTCGCAGACCAAAGGTACG+CGG + chr7_2:6816767-6816786 None:intergenic 50.0%
CTGACAGATCTTCCTCCTCG+TGG + chr7_2:6808390-6808409 None:intergenic 55.0%
! GGTGATGACGAGATTCAGCC+AGG - chr7_2:6808496-6808515 Msa1046350:CDS 55.0%
GGCTGGACCCCTCAAAGAAT+AGG - chr7_2:6809283-6809302 Msa1046350:intron 55.0%
CTCACCGGAAATGGAAGAGG+AGG + chr7_2:6809778-6809797 None:intergenic 55.0%
CTCCTCTTCCATTTCCGGTG+AGG - chr7_2:6809776-6809795 Msa1046350:intron 55.0%
CTCCTCACCGGAAATGGAAG+AGG + chr7_2:6809781-6809800 None:intergenic 55.0%
CTCTTCCATTTCCGGTGAGG+AGG - chr7_2:6809779-6809798 Msa1046350:intron 55.0%
GGCCAATGCAAGCACAAGCA+AGG - chr7_2:6811029-6811048 Msa1046350:intron 55.0%
CATTCTCGAGCTTGAGGGCT+CGG + chr7_2:6811725-6811744 None:intergenic 55.0%
TCACTGATGGAGGGAGCTCT+AGG + chr7_2:6811918-6811937 None:intergenic 55.0%
CTCTAGCCATATCCCTTGGC+AGG - chr7_2:6812208-6812227 Msa1046350:intron 55.0%
GCCATATCCCTTGGCAGGTT+AGG - chr7_2:6812213-6812232 Msa1046350:intron 55.0%
TTTGCAGGGGACCAACGACT+TGG + chr7_2:6812313-6812332 None:intergenic 55.0%
CGTTGGTCCCCTGCAAACTT+TGG - chr7_2:6812316-6812335 Msa1046350:intron 55.0%
CACGTCAGCATGTTGGATGC+AGG + chr7_2:6812946-6812965 None:intergenic 55.0%
TGCAACGTGGCAATGCCACA+TGG - chr7_2:6812975-6812994 Msa1046350:intron 55.0%
ACTCTCTCCGACGAAAGCGA+CGG - chr7_2:6814155-6814174 Msa1046350:intron 55.0%
! TTCGTCTCCGTCGCTTTCGT+CGG + chr7_2:6814165-6814184 None:intergenic 55.0%
!! GAAGGAGGAGGTGTTTCCAC+CGG - chr7_2:6814182-6814201 Msa1046350:intron 55.0%
CTCGGGAGAGGAGAAAGGAT+CGG - chr7_2:6814352-6814371 Msa1046350:intron 55.0%
! ACATCGATTGGGGGTGGTGA+TGG - chr7_2:6814597-6814616 Msa1046350:intron 55.0%
GTTTGTAGCGATGGAGGCAG+AGG + chr7_2:6814919-6814938 None:intergenic 55.0%
CAGTACCCCTAAGGATTGGG+CGG - chr7_2:6816491-6816510 Msa1046350:five_prime_UTR 55.0%
CCATGCATACCTCAGCTGGT+TGG + chr7_2:6816670-6816689 None:intergenic 55.0%
CCAACCAGCTGAGGTATGCA+TGG - chr7_2:6816667-6816686 Msa1046350:intron 55.0%
TTGCTGGAACCGCGTACCTT+TGG - chr7_2:6816755-6816774 Msa1046350:intron 55.0%
GACGCAGAGCGCAAGGTCAA+GGG - chr7_2:6808749-6808768 Msa1046350:intron 60.0%
AGAGCGCAAGGTCAAGGGAG+AGG - chr7_2:6808754-6808773 Msa1046350:intron 60.0%
GACGAAAGCGACGGAGACGA+AGG - chr7_2:6814164-6814183 Msa1046350:intron 60.0%
GAAAGCGACGGAGACGAAGG+AGG - chr7_2:6814167-6814186 Msa1046350:intron 60.0%
GGAAACTGAGCCACCTCCAC+CGG + chr7_2:6814204-6814223 None:intergenic 60.0%
! GAGTTGAGTGGACTCGGGAG+AGG - chr7_2:6814340-6814359 Msa1046350:intron 60.0%
GTGGACTCGGGAGAGGAGAA+AGG - chr7_2:6814347-6814366 Msa1046350:intron 60.0%
GGGAGAGGAGAAAGGATCGG+CGG - chr7_2:6814355-6814374 Msa1046350:intron 60.0%
AGAGGAGAAAGGATCGGCGG+TGG - chr7_2:6814358-6814377 Msa1046350:intron 60.0%
! GTTTGTGGCGTTGGAGGCAG+AGG - chr7_2:6814569-6814588 Msa1046350:intron 60.0%
! CAGAGGCCGCGACATCGATT+GGG - chr7_2:6814586-6814605 Msa1046350:intron 60.0%
! AGAGGCCGCGACATCGATTG+GGG - chr7_2:6814587-6814606 Msa1046350:intron 60.0%
ACCACCCCCAATCGATGTCG+CGG + chr7_2:6814595-6814614 None:intergenic 60.0%
! GGCCGTGACATCGATTGGAG+TGG + chr7_2:6814898-6814917 None:intergenic 60.0%
GCAGAGGCCGTGACATCGAT+TGG + chr7_2:6814903-6814922 None:intergenic 60.0%
TGTGCAGAGAGCAAGCAGGC+AGG - chr7_2:6816636-6816655 Msa1046350:five_prime_UTR 60.0%
GGGACCATGCATACCTCAGC+TGG + chr7_2:6816674-6816693 None:intergenic 60.0%
GGAAGAGGACGCAGAGCGCA+AGG - chr7_2:6808742-6808761 Msa1046350:intron 65.0%
GGACGCAGAGCGCAAGGTCA+AGG - chr7_2:6808748-6808767 Msa1046350:intron 65.0%
AGCGACGGAGACGAAGGAGG+AGG - chr7_2:6814170-6814189 Msa1046350:intron 65.0%
!! GGAGGAGGTGTTTCCACCGG+TGG - chr7_2:6814185-6814204 Msa1046350:intron 65.0%
!! GGAGGTGTTTCCACCGGTGG+AGG - chr7_2:6814188-6814207 Msa1046350:intron 65.0%
GGTGTTTCCACCGGTGGAGG+TGG - chr7_2:6814191-6814210 Msa1046350:intron 65.0%
AACTGAGCCACCTCCACCGG+TGG + chr7_2:6814201-6814220 None:intergenic 65.0%
GCAGAGGCCGCGACATCGAT+TGG - chr7_2:6814585-6814604 Msa1046350:intron 65.0%
! GAGGCCGCGACATCGATTGG+GGG - chr7_2:6814588-6814607 Msa1046350:intron 65.0%
GCAGACGACCCAACCAGCTG+AGG - chr7_2:6816658-6816677 Msa1046350:intron 65.0%
! GCCGCGACATCGATTGGGGG+TGG - chr7_2:6814591-6814610 Msa1046350:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 6807684 6817107 6807684 ID=Msa1046350;Name=Msa1046350
chr7_2 mRNA 6807684 6817107 6807684 ID=Msa1046350-mRNA-1;Parent=Msa1046350;Name=Msa1046350-mRNA-1;_AED=0.28;_eAED=0.28;_QI=999|0.77|1|1|0.44|0.5|10|160|87
chr7_2 exon 6807684 6807882 6807684 ID=Msa1046350-mRNA-1:exon:1645;Parent=Msa1046350-mRNA-1
chr7_2 exon 6808380 6808559 6808380 ID=Msa1046350-mRNA-1:exon:1644;Parent=Msa1046350-mRNA-1
chr7_2 exon 6813651 6813761 6813651 ID=Msa1046350-mRNA-1:exon:1643;Parent=Msa1046350-mRNA-1
chr7_2 exon 6814411 6814481 6814411 ID=Msa1046350-mRNA-1:exon:1642;Parent=Msa1046350-mRNA-1
chr7_2 exon 6815476 6815536 6815476 ID=Msa1046350-mRNA-1:exon:1641;Parent=Msa1046350-mRNA-1
chr7_2 exon 6815636 6815647 6815636 ID=Msa1046350-mRNA-1:exon:1640;Parent=Msa1046350-mRNA-1
chr7_2 exon 6815785 6815866 6815785 ID=Msa1046350-mRNA-1:exon:1639;Parent=Msa1046350-mRNA-1
chr7_2 exon 6815995 6816096 6815995 ID=Msa1046350-mRNA-1:exon:1638;Parent=Msa1046350-mRNA-1
chr7_2 exon 6816187 6816676 6816187 ID=Msa1046350-mRNA-1:exon:1637;Parent=Msa1046350-mRNA-1
chr7_2 exon 6816993 6817107 6816993 ID=Msa1046350-mRNA-1:exon:1636;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6816993 6817107 6816993 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6816187 6816676 6816187 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6815995 6816096 6815995 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6815785 6815866 6815785 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6815636 6815647 6815636 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6815476 6815536 6815476 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6814411 6814481 6814411 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 five_prime_UTR 6813696 6813761 6813696 ID=Msa1046350-mRNA-1:five_prime_utr;Parent=Msa1046350-mRNA-1
chr7_2 CDS 6813651 6813695 6813651 ID=Msa1046350-mRNA-1:cds;Parent=Msa1046350-mRNA-1
chr7_2 CDS 6808380 6808559 6808380 ID=Msa1046350-mRNA-1:cds;Parent=Msa1046350-mRNA-1
chr7_2 CDS 6807844 6807882 6807844 ID=Msa1046350-mRNA-1:cds;Parent=Msa1046350-mRNA-1
chr7_2 three_prime_UTR 6807684 6807843 6807684 ID=Msa1046350-mRNA-1:three_prime_utr;Parent=Msa1046350-mRNA-1
Gene Sequence

>Msa1046350

ATGCTGACAAGTTCGAGAATAAAGGATTGGGACAAAAACATGCCAGCAAGCAAATATGCGAGTTCTTTGCCTCAACCTACTTCCACGTTTCAGCTTGAAACAGCTTTCCAACAGTTTCTAGAAAGGGGCGGTGTCAAATTGGACAGAGATACTATGATACAAGCACTTAGCGCTGCATACGTGAAGTATATGTATCTTAAATCATTGGGACATGTGGAGAACAAGGAACAGTTATCAGATCAGGAAGAGAAGAAAGGAAACTAG

Protein sequence

>Msa1046350

MLTSSRIKDWDKNMPASKYASSLPQPTSTFQLETAFQQFLERGGVKLDRDTMIQALSAAYVKYMYLKSLGHVENKEQLSDQEEKKGN*