AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1154280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154280 MtrunA17_Chr7g0245231 96.262 107 4 0 2 108 65 171 3.01e-72 212
Msa1154280 MtrunA17_Chr6g0450921 89.720 107 11 0 2 108 64 170 5.59e-67 199
Msa1154280 MtrunA17_Chr1g0188171 42.157 102 59 0 2 103 47 148 4.20e-25 92.0
Msa1154280 MtrunA17_Chr1g0166281 42.308 104 60 0 2 105 47 150 1.30e-24 90.9
Msa1154280 MtrunA17_Chr5g0440931 41.414 99 58 0 3 101 48 146 2.66e-23 87.4
Msa1154280 MtrunA17_Chr6g0460211 41.414 99 58 0 3 101 48 146 3.04e-23 87.4
Msa1154280 MtrunA17_Chr3g0093271 41.414 99 58 0 3 101 99 197 4.11e-23 88.6
Msa1154280 MtrunA17_Chr7g0254731 40.404 99 59 0 3 101 48 146 1.28e-22 85.9
Msa1154280 MtrunA17_Chr1g0185001 37.864 103 61 2 2 102 47 148 2.90e-18 74.7
Msa1154280 MtrunA17_Chr1g0161211 38.000 100 62 0 2 101 81 180 1.56e-14 66.2
Msa1154280 MtrunA17_Chr7g0274101 37.755 98 61 0 7 104 52 149 4.78e-14 63.9
Msa1154280 MtrunA17_Chr8g0351681 38.679 106 59 2 2 101 86 191 1.04e-13 63.9
Msa1154280 MtrunA17_Chr7g0245911 37.615 109 61 3 2 103 84 192 1.33e-13 63.5
Msa1154280 MtrunA17_Chr1g0176751 36.000 100 61 2 3 102 465 561 2.80e-13 64.3
Msa1154280 MtrunA17_Chr7g0267751 37.000 100 60 2 2 101 475 571 2.92e-13 64.3
Msa1154280 MtrunA17_Chr8g0391691 34.579 107 69 1 2 108 71 176 3.94e-13 62.4
Msa1154280 MtrunA17_Chr4g0033601 30.841 107 72 1 2 106 40 146 5.63e-13 61.2
Msa1154280 MtrunA17_Chr3g0111371 34.951 103 63 2 2 104 40 138 1.30e-12 59.7
Msa1154280 MtrunA17_Chr5g0434951 33.000 100 66 1 2 101 39 137 5.57e-12 58.2
Msa1154280 MtrunA17_Chr8g0385341 39.785 93 51 3 9 101 379 466 4.85e-11 57.8
Msa1154280 MtrunA17_Chr8g0392951 33.000 100 66 1 3 102 60 158 5.89e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154280 AT3G50360.1 72.381 105 29 0 2 106 62 166 3.37e-48 151
Msa1154280 AT4G37010.1 62.857 105 39 0 2 106 62 166 4.73e-41 133
Msa1154280 AT4G37010.2 62.857 105 39 0 2 106 66 170 5.44e-41 133
Msa1154280 AT1G66410.4 41.414 99 58 0 3 101 12 110 4.91e-24 89.0
Msa1154280 AT1G66410.3 41.414 99 58 0 3 101 12 110 4.91e-24 89.0
Msa1154280 AT5G37780.4 41.414 99 58 0 3 101 35 133 5.05e-24 89.4
Msa1154280 AT1G66410.1 41.414 99 58 0 3 101 48 146 9.69e-24 89.0
Msa1154280 AT5G37780.1 41.414 99 58 0 3 101 48 146 9.69e-24 89.0
Msa1154280 AT5G37780.2 41.414 99 58 0 3 101 63 161 9.87e-24 89.4
Msa1154280 AT1G66410.2 41.414 99 58 0 3 101 58 156 1.03e-23 89.4
Msa1154280 AT5G37780.3 41.414 99 58 0 3 101 74 172 1.27e-23 89.4
Msa1154280 AT3G22930.1 40.385 104 62 0 2 105 70 173 1.30e-23 89.4
Msa1154280 AT3G43810.4 41.414 99 58 0 3 101 12 110 1.70e-23 87.4
Msa1154280 AT3G43810.3 41.414 99 58 0 3 101 12 110 1.70e-23 87.4
Msa1154280 AT3G56800.1 41.414 99 58 0 3 101 48 146 2.60e-23 87.8
Msa1154280 AT2G41110.1 41.414 99 58 0 3 101 48 146 2.60e-23 87.8
Msa1154280 AT2G27030.1 41.414 99 58 0 3 101 48 146 2.60e-23 87.8
Msa1154280 AT2G41110.2 41.414 99 58 0 3 101 60 158 3.91e-23 87.8
Msa1154280 AT3G43810.1 41.414 99 58 0 3 101 48 146 4.19e-23 87.4
Msa1154280 AT4G14640.2 40.000 100 60 0 2 101 30 129 4.48e-23 87.0
Msa1154280 AT2G27030.3 41.414 99 58 0 3 101 48 146 5.18e-23 88.2
Msa1154280 AT4G14640.1 40.000 100 60 0 2 101 48 147 8.26e-23 86.7
Msa1154280 AT3G43810.2 41.414 99 58 0 3 101 48 146 1.06e-22 88.2
Msa1154280 AT5G21274.1 40.404 99 59 0 3 101 48 146 1.29e-22 86.3
Msa1154280 AT2G36180.1 40.909 110 62 2 2 108 35 144 4.66e-16 69.3
Msa1154280 AT1G24620.1 33.645 107 70 1 2 108 72 177 7.73e-15 67.0
Msa1154280 AT3G51920.1 33.333 105 70 0 2 106 47 151 3.05e-14 64.7
Msa1154280 AT3G25600.1 33.663 101 65 1 3 101 48 148 9.40e-14 63.5
Msa1154280 AT3G22930.2 41.935 62 36 0 2 63 70 131 4.69e-13 61.2
Msa1154280 AT5G19360.1 36.364 99 61 2 3 101 409 505 6.02e-13 63.9
Msa1154280 AT1G66400.1 34.653 101 64 1 7 105 55 155 7.48e-13 61.2
Msa1154280 AT1G18530.1 32.673 101 66 1 3 101 43 143 1.18e-12 60.8
Msa1154280 AT2G43290.1 34.545 110 65 3 4 106 102 211 1.84e-12 61.2
Msa1154280 AT5G12180.1 35.354 99 62 2 3 101 414 510 3.47e-12 61.6
Msa1154280 AT4G14640.3 40.984 61 36 0 2 62 48 108 4.52e-12 58.5
Msa1154280 AT3G03000.1 27.619 105 75 1 3 106 56 160 5.12e-12 59.3
Msa1154280 AT5G23580.1 35.000 100 62 2 2 101 362 458 6.79e-12 60.8
Msa1154280 AT2G41100.2 30.088 113 62 2 7 102 16 128 7.54e-12 59.3
Msa1154280 AT1G32250.1 29.091 110 72 1 3 106 52 161 1.28e-11 58.2
Msa1154280 AT2G41100.7 30.088 113 62 2 7 102 106 218 2.21e-11 58.9
Msa1154280 AT2G41100.6 30.088 113 62 2 7 102 106 218 2.21e-11 58.9
Msa1154280 AT2G41100.3 30.088 113 62 2 7 102 106 218 2.21e-11 58.9
Msa1154280 AT2G41100.4 30.088 113 62 2 7 102 141 253 2.49e-11 58.9
Msa1154280 AT2G41100.1 30.088 113 62 2 7 102 141 253 2.49e-11 58.9
Msa1154280 AT1G18210.2 32.323 99 63 1 3 101 59 153 5.36e-11 56.6
Msa1154280 AT1G18210.1 32.323 99 63 1 3 101 59 153 5.36e-11 56.6

Find 39 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTCTCTTTCTCCTATTT+TGG 0.237506 7_4:-41716248 None:intergenic
TTACAACTTACAAGTATAAA+TGG 0.283259 7_4:-41718473 None:intergenic
TTTGTGGAAACTTACTATTT+TGG 0.351393 7_4:-41716501 None:intergenic
CTACTGTTCCCAGTTGCATT+TGG 0.359674 7_4:-41718363 None:intergenic
TGTGTTATTGTGCAAATTGT+AGG 0.363040 7_4:+41718234 Msa1154280:three_prime_UTR
TGGCTTGATTACATATATAT+TGG 0.369271 7_4:+41718198 Msa1154280:three_prime_UTR
CACATGATGACGGCCAAAAT+AGG 0.383388 7_4:+41716235 Msa1154280:CDS
CATAAGTGTGTTACTTGCTC+TGG 0.399184 7_4:-41718556 None:intergenic
CTGAATTTAGATGTTCTGTT+TGG 0.402632 7_4:+41718339 Msa1154280:three_prime_UTR
CTGTTTGGACCAAATGCAAC+TGG 0.409973 7_4:+41718354 Msa1154280:three_prime_UTR
TGTAACAACTTAATGCTTGT+CGG 0.416612 7_4:+41718491 Msa1154280:three_prime_UTR
CTACATCGAGTAGTTAGCTT+TGG 0.418501 7_4:+41718174 Msa1154280:three_prime_UTR
CTGGAATGGTTGTCGGAGTT+GGG 0.423966 7_4:-41718537 None:intergenic
ATCGAGTAGTTAGCTTTGGC+TGG 0.442867 7_4:+41718178 Msa1154280:three_prime_UTR
ATTCAATAACAACTTGTGAT+AGG 0.443710 7_4:+41718514 Msa1154280:three_prime_UTR
TGTATCTTATCTCCGATCAT+AGG 0.444892 7_4:+41718437 Msa1154280:three_prime_UTR
TCTGGAATGGTTGTCGGAGT+TGG 0.454925 7_4:-41718538 None:intergenic
ATCATCATGATGAACTCCTC+TGG 0.458576 7_4:-41718120 None:intergenic
AAATGATAGCAGATGTCGAC+AGG 0.464023 7_4:+41716176 Msa1154280:CDS
ACTTGCTCTGGAATGGTTGT+CGG 0.466816 7_4:-41718544 None:intergenic
ATCATGATGATGAACACAAC+AGG 0.494636 7_4:+41718132 Msa1154280:CDS
TGTATTGTAGGGTAAGATAT+CGG 0.507847 7_4:+41716396 Msa1154280:intron
TGATAGAGAGATTCAGGAGA+TGG 0.522125 7_4:+41716465 Msa1154280:CDS
GTGTGTTACTTGCTCTGGAA+TGG 0.524313 7_4:-41718551 None:intergenic
TAGCAGATGTCGACAGGGAT+GGG 0.548013 7_4:+41716182 Msa1154280:CDS
GACAATGTTTCTCCTATGAT+CGG 0.560921 7_4:-41718449 None:intergenic
AAGCGGATTGCAAAAGAGCT+AGG 0.569005 7_4:+41716430 Msa1154280:CDS
AGGAGAAAGAGACACTAAAG+AGG 0.570607 7_4:+41716255 Msa1154280:CDS
ATAGCAGATGTCGACAGGGA+TGG 0.573080 7_4:+41716181 Msa1154280:CDS
GATGTCGACAGGGATGGGAG+TGG 0.578755 7_4:+41716187 Msa1154280:CDS
TGATCGAGAGGTTGATCCAG+AGG 0.590124 7_4:+41718104 Msa1154280:CDS
TGTTTGGACCAAATGCAACT+GGG 0.605766 7_4:+41718355 Msa1154280:three_prime_UTR
GTAGGGTAAGATATCGGCAT+CGG 0.618796 7_4:+41716402 Msa1154280:intron
AGACATATATCAATGCTCAC+AGG 0.625857 7_4:-41718318 None:intergenic
ATAATATGCAGATGATCGAG+AGG 0.639575 7_4:+41718092 Msa1154280:intron
GATGTAGATATGACTAGTGA+CGG 0.656087 7_4:-41718158 None:intergenic
TGAATTTGAGCACATGATGA+CGG 0.665935 7_4:+41716225 Msa1154280:CDS
TATCGGCATCGGATATCAAG+CGG 0.676928 7_4:+41716413 Msa1154280:CDS
AATGATAGCAGATGTCGACA+GGG 0.708500 7_4:+41716177 Msa1154280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAATATATTTTAACAA+TGG - chr7_4:41717122-41717141 None:intergenic 10.0%
!!! AAACTAATATATTTTAACAA+TGG - chr7_4:41717122-41717141 None:intergenic 10.0%
!! ATAAGAAATAATAGTATCAT+TGG + chr7_4:41716645-41716664 Msa1154280:intron 15.0%
!! TAAAAAGTAAACATAATGAT+TGG + chr7_4:41716861-41716880 Msa1154280:intron 15.0%
!! ATATATATATATAATCCCTA+AGG + chr7_4:41717152-41717171 Msa1154280:intron 15.0%
!!! TTTTAACTTTGTTTTTTATG+GGG - chr7_4:41717429-41717448 None:intergenic 15.0%
!!! CTTTTAACTTTGTTTTTTAT+GGG - chr7_4:41717430-41717449 None:intergenic 15.0%
!! AATAGATTAAAGTATAGAAT+AGG + chr7_4:41717467-41717486 Msa1154280:intron 15.0%
!!! TTTTTCAATAAATGTTTGAT+GGG - chr7_4:41717888-41717907 None:intergenic 15.0%
!!! ATTTTTCAATAAATGTTTGA+TGG - chr7_4:41717889-41717908 None:intergenic 15.0%
!! ATAAGAAATAATAGTATCAT+TGG + chr7_4:41716645-41716664 Msa1154280:intron 15.0%
!! TAAAAAGTAAACATAATGAT+TGG + chr7_4:41716861-41716880 Msa1154280:intron 15.0%
!! ATATATATATATAATCCCTA+AGG + chr7_4:41717152-41717171 Msa1154280:intron 15.0%
!!! TTTTAACTTTGTTTTTTATG+GGG - chr7_4:41717429-41717448 None:intergenic 15.0%
!!! CTTTTAACTTTGTTTTTTAT+GGG - chr7_4:41717430-41717449 None:intergenic 15.0%
!! AATAGATTAAAGTATAGAAT+AGG + chr7_4:41717467-41717486 Msa1154280:intron 15.0%
!!! TTTTTCAATAAATGTTTGAT+GGG - chr7_4:41717888-41717907 None:intergenic 15.0%
!!! ATTTTTCAATAAATGTTTGA+TGG - chr7_4:41717889-41717908 None:intergenic 15.0%
!!! TTTTGTCTTGATCAATAATA+TGG - chr7_4:41716297-41716316 None:intergenic 20.0%
!!! TATGATTCATTTTTATTGTC+AGG - chr7_4:41716836-41716855 None:intergenic 20.0%
!!! ATTTTAATTAGAGTACCTTA+AGG + chr7_4:41716950-41716969 Msa1154280:intron 20.0%
!!! CCTTTTAACTTTGTTTTTTA+TGG - chr7_4:41717431-41717450 None:intergenic 20.0%
!! CCATAAAAAACAAAGTTAAA+AGG + chr7_4:41717428-41717447 Msa1154280:intron 20.0%
!! TGGTTTCATAAAAATTCTTA+AGG + chr7_4:41717949-41717968 Msa1154280:intron 20.0%
!! GGTTTCATAAAAATTCTTAA+GGG + chr7_4:41717950-41717969 Msa1154280:intron 20.0%
!! GTTTCATAAAAATTCTTAAG+GGG + chr7_4:41717951-41717970 Msa1154280:intron 20.0%
!! AAATAATATCTCACAAACAT+GGG - chr7_4:41718053-41718072 None:intergenic 20.0%
!! TAAATAATATCTCACAAACA+TGG - chr7_4:41718054-41718073 None:intergenic 20.0%
!! TTACAACTTACAAGTATAAA+TGG - chr7_4:41718476-41718495 None:intergenic 20.0%
!!! TTTTGTCTTGATCAATAATA+TGG - chr7_4:41716297-41716316 None:intergenic 20.0%
!!! TATGATTCATTTTTATTGTC+AGG - chr7_4:41716836-41716855 None:intergenic 20.0%
!!! ATTTTAATTAGAGTACCTTA+AGG + chr7_4:41716950-41716969 Msa1154280:intron 20.0%
!!! CCTTTTAACTTTGTTTTTTA+TGG - chr7_4:41717431-41717450 None:intergenic 20.0%
!! CCATAAAAAACAAAGTTAAA+AGG + chr7_4:41717428-41717447 Msa1154280:intron 20.0%
!! TGGTTTCATAAAAATTCTTA+AGG + chr7_4:41717949-41717968 Msa1154280:intron 20.0%
!! GGTTTCATAAAAATTCTTAA+GGG + chr7_4:41717950-41717969 Msa1154280:intron 20.0%
!! GTTTCATAAAAATTCTTAAG+GGG + chr7_4:41717951-41717970 Msa1154280:intron 20.0%
!! AAATAATATCTCACAAACAT+GGG - chr7_4:41718053-41718072 None:intergenic 20.0%
!! TAAATAATATCTCACAAACA+TGG - chr7_4:41718054-41718073 None:intergenic 20.0%
!! TTACAACTTACAAGTATAAA+TGG - chr7_4:41718476-41718495 None:intergenic 20.0%
!!! TGATTCTCATTGTATTTTTG+TGG + chr7_4:41716369-41716388 Msa1154280:intron 25.0%
!! TTTGTGGAAACTTACTATTT+TGG - chr7_4:41716504-41716523 None:intergenic 25.0%
!! TAAAAATTTTCCATCTCACA+TGG + chr7_4:41716552-41716571 Msa1154280:intron 25.0%
! CGTATTTGTATATCATTCTA+CGG + chr7_4:41716575-41716594 Msa1154280:intron 25.0%
! TTATGAACGCTAAACTTAAA+AGG - chr7_4:41717207-41717226 None:intergenic 25.0%
! ACACAAAAATTATAAGTTCC+AGG - chr7_4:41717508-41717527 None:intergenic 25.0%
! ATCAAGGTAGAATAAACAAT+AGG + chr7_4:41717574-41717593 Msa1154280:intron 25.0%
! TCAAGGTAGAATAAACAATA+GGG + chr7_4:41717575-41717594 Msa1154280:intron 25.0%
!! TTTGTCAGTTTGAAACTAAA+CGG + chr7_4:41717915-41717934 Msa1154280:intron 25.0%
! TGGCTTGATTACATATATAT+TGG + chr7_4:41718198-41718217 Msa1154280:three_prime_UTR 25.0%
! ATTCAATAACAACTTGTGAT+AGG + chr7_4:41718514-41718533 Msa1154280:three_prime_UTR 25.0%
!!! TGATTCTCATTGTATTTTTG+TGG + chr7_4:41716369-41716388 Msa1154280:intron 25.0%
!! TTTGTGGAAACTTACTATTT+TGG - chr7_4:41716504-41716523 None:intergenic 25.0%
!! TAAAAATTTTCCATCTCACA+TGG + chr7_4:41716552-41716571 Msa1154280:intron 25.0%
! CGTATTTGTATATCATTCTA+CGG + chr7_4:41716575-41716594 Msa1154280:intron 25.0%
! TTATGAACGCTAAACTTAAA+AGG - chr7_4:41717207-41717226 None:intergenic 25.0%
! ACACAAAAATTATAAGTTCC+AGG - chr7_4:41717508-41717527 None:intergenic 25.0%
! ATCAAGGTAGAATAAACAAT+AGG + chr7_4:41717574-41717593 Msa1154280:intron 25.0%
! TCAAGGTAGAATAAACAATA+GGG + chr7_4:41717575-41717594 Msa1154280:intron 25.0%
!! TTTGTCAGTTTGAAACTAAA+CGG + chr7_4:41717915-41717934 Msa1154280:intron 25.0%
! TGGCTTGATTACATATATAT+TGG + chr7_4:41718198-41718217 Msa1154280:three_prime_UTR 25.0%
! ATTCAATAACAACTTGTGAT+AGG + chr7_4:41718514-41718533 Msa1154280:three_prime_UTR 25.0%
TGTATTGTAGGGTAAGATAT+CGG + chr7_4:41716396-41716415 Msa1154280:intron 30.0%
! TTTTACTGATAGAGAGATTC+AGG + chr7_4:41716459-41716478 Msa1154280:CDS 30.0%
CTAAAAAGTTAGAACTAGCA+AGG - chr7_4:41716532-41716551 None:intergenic 30.0%
! TTTTAGTACTCACGTAGTTT+CGG + chr7_4:41716725-41716744 Msa1154280:intron 30.0%
ACATAATTTGAGCTATAGAG+AGG + chr7_4:41716894-41716913 Msa1154280:intron 30.0%
CATAATTTGAGCTATAGAGA+GGG + chr7_4:41716895-41716914 Msa1154280:intron 30.0%
TACCTTAAGGTAATATTTGC+TGG + chr7_4:41716963-41716982 Msa1154280:intron 30.0%
! AACTTACTTTCGGACATTTT+GGG - chr7_4:41717002-41717021 None:intergenic 30.0%
TGTTCCTAACAACTTACTTT+CGG - chr7_4:41717012-41717031 None:intergenic 30.0%
ATTATAAGTTCCAGGTGATA+TGG - chr7_4:41717500-41717519 None:intergenic 30.0%
!! ATAAACAATAGGGTGCTATT+TGG + chr7_4:41717585-41717604 Msa1154280:intron 30.0%
!!! TATAGGCATTTTGGATTAGT+AGG + chr7_4:41717675-41717694 Msa1154280:intron 30.0%
TTTGATGGGATATACAATTC+AGG - chr7_4:41717874-41717893 None:intergenic 30.0%
! TTGTCAGTTTGAAACTAAAC+GGG + chr7_4:41717916-41717935 Msa1154280:intron 30.0%
TTCAACACACAAAAAGAGTA+TGG - chr7_4:41717999-41718018 None:intergenic 30.0%
!!! GTTGAATTTTTTCTTGCGTT+AGG + chr7_4:41718013-41718032 Msa1154280:intron 30.0%
!!! ATTTTTTCTTGCGTTAGGAT+TGG + chr7_4:41718018-41718037 Msa1154280:intron 30.0%
! TGTGTTATTGTGCAAATTGT+AGG + chr7_4:41718234-41718253 Msa1154280:three_prime_UTR 30.0%
CTGAATTTAGATGTTCTGTT+TGG + chr7_4:41718339-41718358 Msa1154280:three_prime_UTR 30.0%
TGTAACAACTTAATGCTTGT+CGG + chr7_4:41718491-41718510 Msa1154280:three_prime_UTR 30.0%
TGTATTGTAGGGTAAGATAT+CGG + chr7_4:41716396-41716415 Msa1154280:intron 30.0%
! TTTTACTGATAGAGAGATTC+AGG + chr7_4:41716459-41716478 Msa1154280:CDS 30.0%
CTAAAAAGTTAGAACTAGCA+AGG - chr7_4:41716532-41716551 None:intergenic 30.0%
! TTTTAGTACTCACGTAGTTT+CGG + chr7_4:41716725-41716744 Msa1154280:intron 30.0%
ACATAATTTGAGCTATAGAG+AGG + chr7_4:41716894-41716913 Msa1154280:intron 30.0%
CATAATTTGAGCTATAGAGA+GGG + chr7_4:41716895-41716914 Msa1154280:intron 30.0%
TACCTTAAGGTAATATTTGC+TGG + chr7_4:41716963-41716982 Msa1154280:intron 30.0%
! AACTTACTTTCGGACATTTT+GGG - chr7_4:41717002-41717021 None:intergenic 30.0%
TGTTCCTAACAACTTACTTT+CGG - chr7_4:41717012-41717031 None:intergenic 30.0%
ATTATAAGTTCCAGGTGATA+TGG - chr7_4:41717500-41717519 None:intergenic 30.0%
!! ATAAACAATAGGGTGCTATT+TGG + chr7_4:41717585-41717604 Msa1154280:intron 30.0%
!!! TATAGGCATTTTGGATTAGT+AGG + chr7_4:41717675-41717694 Msa1154280:intron 30.0%
TTTGATGGGATATACAATTC+AGG - chr7_4:41717874-41717893 None:intergenic 30.0%
! TTGTCAGTTTGAAACTAAAC+GGG + chr7_4:41717916-41717935 Msa1154280:intron 30.0%
TTCAACACACAAAAAGAGTA+TGG - chr7_4:41717999-41718018 None:intergenic 30.0%
!!! GTTGAATTTTTTCTTGCGTT+AGG + chr7_4:41718013-41718032 Msa1154280:intron 30.0%
!!! ATTTTTTCTTGCGTTAGGAT+TGG + chr7_4:41718018-41718037 Msa1154280:intron 30.0%
! TGTGTTATTGTGCAAATTGT+AGG + chr7_4:41718234-41718253 Msa1154280:three_prime_UTR 30.0%
CTGAATTTAGATGTTCTGTT+TGG + chr7_4:41718339-41718358 Msa1154280:three_prime_UTR 30.0%
TGTAACAACTTAATGCTTGT+CGG + chr7_4:41718491-41718510 Msa1154280:three_prime_UTR 30.0%
TGAATTTGAGCACATGATGA+CGG + chr7_4:41716225-41716244 Msa1154280:CDS 35.0%
! AGTGTCTCTTTCTCCTATTT+TGG - chr7_4:41716251-41716270 None:intergenic 35.0%
! TTTTGTGGTCACTGTATTGT+AGG + chr7_4:41716384-41716403 Msa1154280:intron 35.0%
TTTGTGGTCACTGTATTGTA+GGG + chr7_4:41716385-41716404 Msa1154280:intron 35.0%
AACTAGCAAGGATATGTTTG+TGG - chr7_4:41716520-41716539 None:intergenic 35.0%
! ATTGAAAGTATAGTGCGCAT+TGG + chr7_4:41716696-41716715 Msa1154280:intron 35.0%
! TTGAAAGTATAGTGCGCATT+GGG + chr7_4:41716697-41716716 Msa1154280:intron 35.0%
GACATTCATGTAAACATCGA+AGG + chr7_4:41716786-41716805 Msa1154280:intron 35.0%
TAGAGAGGGAATCTGATATA+TGG + chr7_4:41716909-41716928 Msa1154280:intron 35.0%
TGATATATGGTTGCATTGCA+TGG + chr7_4:41716922-41716941 Msa1154280:intron 35.0%
CACCAGCAAATATTACCTTA+AGG - chr7_4:41716968-41716987 None:intergenic 35.0%
! CTTAAGGTAATATTTGCTGG+TGG + chr7_4:41716966-41716985 Msa1154280:intron 35.0%
! CAACTTACTTTCGGACATTT+TGG - chr7_4:41717003-41717022 None:intergenic 35.0%
ATGTCCGAAAGTAAGTTGTT+AGG + chr7_4:41717005-41717024 Msa1154280:intron 35.0%
! TACTACTGTAACTTGCAAGA+TGG - chr7_4:41717096-41717115 None:intergenic 35.0%
GAGTTACTACATCAACCTTA+GGG - chr7_4:41717170-41717189 None:intergenic 35.0%
TGAGTTACTACATCAACCTT+AGG - chr7_4:41717171-41717190 None:intergenic 35.0%
GTCAGTTACAATGGCAATTT+GGG + chr7_4:41717618-41717637 Msa1154280:intron 35.0%
! GCACATTTGTATAGGCATTT+TGG + chr7_4:41717666-41717685 Msa1154280:intron 35.0%
CATAACAAGTAGTACAAGCA+GGG - chr7_4:41717813-41717832 None:intergenic 35.0%
ACATAACAAGTAGTACAAGC+AGG - chr7_4:41717814-41717833 None:intergenic 35.0%
CTGGTTCCTATGATTACAAT+AGG + chr7_4:41717846-41717865 Msa1154280:intron 35.0%
CAGGAACCTATTGTAATCAT+AGG - chr7_4:41717855-41717874 None:intergenic 35.0%
! TGTCAGTTTGAAACTAAACG+GGG + chr7_4:41717917-41717936 Msa1154280:intron 35.0%
ATAATATGCAGATGATCGAG+AGG + chr7_4:41718092-41718111 Msa1154280:intron 35.0%
! ATCATGATGATGAACACAAC+AGG + chr7_4:41718132-41718151 Msa1154280:CDS 35.0%
GATGTAGATATGACTAGTGA+CGG - chr7_4:41718161-41718180 None:intergenic 35.0%
AGACATATATCAATGCTCAC+AGG - chr7_4:41718321-41718340 None:intergenic 35.0%
TGTATCTTATCTCCGATCAT+AGG + chr7_4:41718437-41718456 Msa1154280:three_prime_UTR 35.0%
GACAATGTTTCTCCTATGAT+CGG - chr7_4:41718452-41718471 None:intergenic 35.0%
TGAATTTGAGCACATGATGA+CGG + chr7_4:41716225-41716244 Msa1154280:CDS 35.0%
! AGTGTCTCTTTCTCCTATTT+TGG - chr7_4:41716251-41716270 None:intergenic 35.0%
! TTTTGTGGTCACTGTATTGT+AGG + chr7_4:41716384-41716403 Msa1154280:intron 35.0%
TTTGTGGTCACTGTATTGTA+GGG + chr7_4:41716385-41716404 Msa1154280:intron 35.0%
AACTAGCAAGGATATGTTTG+TGG - chr7_4:41716520-41716539 None:intergenic 35.0%
! ATTGAAAGTATAGTGCGCAT+TGG + chr7_4:41716696-41716715 Msa1154280:intron 35.0%
! TTGAAAGTATAGTGCGCATT+GGG + chr7_4:41716697-41716716 Msa1154280:intron 35.0%
GACATTCATGTAAACATCGA+AGG + chr7_4:41716786-41716805 Msa1154280:intron 35.0%
TAGAGAGGGAATCTGATATA+TGG + chr7_4:41716909-41716928 Msa1154280:intron 35.0%
TGATATATGGTTGCATTGCA+TGG + chr7_4:41716922-41716941 Msa1154280:intron 35.0%
CACCAGCAAATATTACCTTA+AGG - chr7_4:41716968-41716987 None:intergenic 35.0%
! CTTAAGGTAATATTTGCTGG+TGG + chr7_4:41716966-41716985 Msa1154280:intron 35.0%
! CAACTTACTTTCGGACATTT+TGG - chr7_4:41717003-41717022 None:intergenic 35.0%
ATGTCCGAAAGTAAGTTGTT+AGG + chr7_4:41717005-41717024 Msa1154280:intron 35.0%
! TACTACTGTAACTTGCAAGA+TGG - chr7_4:41717096-41717115 None:intergenic 35.0%
GAGTTACTACATCAACCTTA+GGG - chr7_4:41717170-41717189 None:intergenic 35.0%
TGAGTTACTACATCAACCTT+AGG - chr7_4:41717171-41717190 None:intergenic 35.0%
GTCAGTTACAATGGCAATTT+GGG + chr7_4:41717618-41717637 Msa1154280:intron 35.0%
! GCACATTTGTATAGGCATTT+TGG + chr7_4:41717666-41717685 Msa1154280:intron 35.0%
CATAACAAGTAGTACAAGCA+GGG - chr7_4:41717813-41717832 None:intergenic 35.0%
ACATAACAAGTAGTACAAGC+AGG - chr7_4:41717814-41717833 None:intergenic 35.0%
CTGGTTCCTATGATTACAAT+AGG + chr7_4:41717846-41717865 Msa1154280:intron 35.0%
CAGGAACCTATTGTAATCAT+AGG - chr7_4:41717855-41717874 None:intergenic 35.0%
! TGTCAGTTTGAAACTAAACG+GGG + chr7_4:41717917-41717936 Msa1154280:intron 35.0%
ATAATATGCAGATGATCGAG+AGG + chr7_4:41718092-41718111 Msa1154280:intron 35.0%
! ATCATGATGATGAACACAAC+AGG + chr7_4:41718132-41718151 Msa1154280:CDS 35.0%
GATGTAGATATGACTAGTGA+CGG - chr7_4:41718161-41718180 None:intergenic 35.0%
AGACATATATCAATGCTCAC+AGG - chr7_4:41718321-41718340 None:intergenic 35.0%
TGTATCTTATCTCCGATCAT+AGG + chr7_4:41718437-41718456 Msa1154280:three_prime_UTR 35.0%
GACAATGTTTCTCCTATGAT+CGG - chr7_4:41718452-41718471 None:intergenic 35.0%
AAATGATAGCAGATGTCGAC+AGG + chr7_4:41716176-41716195 Msa1154280:CDS 40.0%
AATGATAGCAGATGTCGACA+GGG + chr7_4:41716177-41716196 Msa1154280:CDS 40.0%
AGGAGAAAGAGACACTAAAG+AGG + chr7_4:41716255-41716274 Msa1154280:CDS 40.0%
TGATAGAGAGATTCAGGAGA+TGG + chr7_4:41716465-41716484 Msa1154280:CDS 40.0%
TACAAATACGCCATGTGAGA+TGG - chr7_4:41716565-41716584 None:intergenic 40.0%
TATATCATTCTACGGTGAGC+TGG + chr7_4:41716583-41716602 Msa1154280:intron 40.0%
ATATCATTCTACGGTGAGCT+GGG + chr7_4:41716584-41716603 Msa1154280:intron 40.0%
! GGTGGAGATATGTGTGTTTT+AGG + chr7_4:41716605-41716624 Msa1154280:intron 40.0%
TTAGCGTTCATAACCCACTT+CGG + chr7_4:41717214-41717233 Msa1154280:intron 40.0%
CTAAACTAACCCACCCAAAT+TGG - chr7_4:41717314-41717333 None:intergenic 40.0%
GAAGGATATGTTCTGCCATA+TGG + chr7_4:41717365-41717384 Msa1154280:intron 40.0%
TATGTTCTGCCATATGGTAG+CGG + chr7_4:41717371-41717390 Msa1154280:intron 40.0%
GTACAATACACACGATGCAT+AGG + chr7_4:41717526-41717545 Msa1154280:intron 40.0%
TGCGATTTAGCTGGAAATCA+AGG + chr7_4:41717558-41717577 Msa1154280:intron 40.0%
!! ACAATAGGGTGCTATTTGGT+CGG + chr7_4:41717589-41717608 Msa1154280:intron 40.0%
GGTCAGTTACAATGGCAATT+TGG + chr7_4:41717617-41717636 Msa1154280:intron 40.0%
AATGGCAATTTGGGAGTTAG+AGG + chr7_4:41717627-41717646 Msa1154280:intron 40.0%
GGAGTTAGAGGTTAATTAGC+AGG + chr7_4:41717639-41717658 Msa1154280:intron 40.0%
CAGGTTCTGCACATTTGTAT+AGG + chr7_4:41717658-41717677 Msa1154280:intron 40.0%
! TCTCTTAGTTGTGACTTGTG+AGG + chr7_4:41717709-41717728 Msa1154280:intron 40.0%
! CTCTTAGTTGTGACTTGTGA+GGG + chr7_4:41717710-41717729 Msa1154280:intron 40.0%
! TCTTAGTTGTGACTTGTGAG+GGG + chr7_4:41717711-41717730 Msa1154280:intron 40.0%
CCTGCAATGGAGAGAAAATA+AGG - chr7_4:41717752-41717771 None:intergenic 40.0%
!!! CCTTATTTTCTCTCCATTGC+AGG + chr7_4:41717749-41717768 Msa1154280:intron 40.0%
GAACACTGTTATTCCTGCAA+TGG - chr7_4:41717765-41717784 None:intergenic 40.0%
! TACAAGCAGGGAAAGTGTAT+GGG - chr7_4:41717801-41717820 None:intergenic 40.0%
!! GTACTACTTGTTATGTCCTG+TGG + chr7_4:41717818-41717837 Msa1154280:intron 40.0%
! GTTATGTCCTGTGGTTTTTC+TGG + chr7_4:41717827-41717846 Msa1154280:intron 40.0%
ATAGGAACCAGAAAAACCAC+AGG - chr7_4:41717837-41717856 None:intergenic 40.0%
! GTCAGTTTGAAACTAAACGG+GGG + chr7_4:41717918-41717937 Msa1154280:intron 40.0%
! TCAGTTTGAAACTAAACGGG+GGG + chr7_4:41717919-41717938 Msa1154280:intron 40.0%
ATCATCATGATGAACTCCTC+TGG - chr7_4:41718123-41718142 None:intergenic 40.0%
! CTACATCGAGTAGTTAGCTT+TGG + chr7_4:41718174-41718193 Msa1154280:three_prime_UTR 40.0%
TGTTTGGACCAAATGCAACT+GGG + chr7_4:41718355-41718374 Msa1154280:three_prime_UTR 40.0%
!! CATAAGTGTGTTACTTGCTC+TGG - chr7_4:41718559-41718578 None:intergenic 40.0%
AAATGATAGCAGATGTCGAC+AGG + chr7_4:41716176-41716195 Msa1154280:CDS 40.0%
AATGATAGCAGATGTCGACA+GGG + chr7_4:41716177-41716196 Msa1154280:CDS 40.0%
AGGAGAAAGAGACACTAAAG+AGG + chr7_4:41716255-41716274 Msa1154280:CDS 40.0%
TGATAGAGAGATTCAGGAGA+TGG + chr7_4:41716465-41716484 Msa1154280:CDS 40.0%
TACAAATACGCCATGTGAGA+TGG - chr7_4:41716565-41716584 None:intergenic 40.0%
TATATCATTCTACGGTGAGC+TGG + chr7_4:41716583-41716602 Msa1154280:intron 40.0%
ATATCATTCTACGGTGAGCT+GGG + chr7_4:41716584-41716603 Msa1154280:intron 40.0%
! GGTGGAGATATGTGTGTTTT+AGG + chr7_4:41716605-41716624 Msa1154280:intron 40.0%
TTAGCGTTCATAACCCACTT+CGG + chr7_4:41717214-41717233 Msa1154280:intron 40.0%
CTAAACTAACCCACCCAAAT+TGG - chr7_4:41717314-41717333 None:intergenic 40.0%
GAAGGATATGTTCTGCCATA+TGG + chr7_4:41717365-41717384 Msa1154280:intron 40.0%
TATGTTCTGCCATATGGTAG+CGG + chr7_4:41717371-41717390 Msa1154280:intron 40.0%
GTACAATACACACGATGCAT+AGG + chr7_4:41717526-41717545 Msa1154280:intron 40.0%
TGCGATTTAGCTGGAAATCA+AGG + chr7_4:41717558-41717577 Msa1154280:intron 40.0%
!! ACAATAGGGTGCTATTTGGT+CGG + chr7_4:41717589-41717608 Msa1154280:intron 40.0%
GGTCAGTTACAATGGCAATT+TGG + chr7_4:41717617-41717636 Msa1154280:intron 40.0%
AATGGCAATTTGGGAGTTAG+AGG + chr7_4:41717627-41717646 Msa1154280:intron 40.0%
GGAGTTAGAGGTTAATTAGC+AGG + chr7_4:41717639-41717658 Msa1154280:intron 40.0%
CAGGTTCTGCACATTTGTAT+AGG + chr7_4:41717658-41717677 Msa1154280:intron 40.0%
! TCTCTTAGTTGTGACTTGTG+AGG + chr7_4:41717709-41717728 Msa1154280:intron 40.0%
! CTCTTAGTTGTGACTTGTGA+GGG + chr7_4:41717710-41717729 Msa1154280:intron 40.0%
! TCTTAGTTGTGACTTGTGAG+GGG + chr7_4:41717711-41717730 Msa1154280:intron 40.0%
CCTGCAATGGAGAGAAAATA+AGG - chr7_4:41717752-41717771 None:intergenic 40.0%
!!! CCTTATTTTCTCTCCATTGC+AGG + chr7_4:41717749-41717768 Msa1154280:intron 40.0%
GAACACTGTTATTCCTGCAA+TGG - chr7_4:41717765-41717784 None:intergenic 40.0%
! TACAAGCAGGGAAAGTGTAT+GGG - chr7_4:41717801-41717820 None:intergenic 40.0%
!! GTACTACTTGTTATGTCCTG+TGG + chr7_4:41717818-41717837 Msa1154280:intron 40.0%
! GTTATGTCCTGTGGTTTTTC+TGG + chr7_4:41717827-41717846 Msa1154280:intron 40.0%
ATAGGAACCAGAAAAACCAC+AGG - chr7_4:41717837-41717856 None:intergenic 40.0%
! GTCAGTTTGAAACTAAACGG+GGG + chr7_4:41717918-41717937 Msa1154280:intron 40.0%
! TCAGTTTGAAACTAAACGGG+GGG + chr7_4:41717919-41717938 Msa1154280:intron 40.0%
ATCATCATGATGAACTCCTC+TGG - chr7_4:41718123-41718142 None:intergenic 40.0%
! CTACATCGAGTAGTTAGCTT+TGG + chr7_4:41718174-41718193 Msa1154280:three_prime_UTR 40.0%
TGTTTGGACCAAATGCAACT+GGG + chr7_4:41718355-41718374 Msa1154280:three_prime_UTR 40.0%
!! CATAAGTGTGTTACTTGCTC+TGG - chr7_4:41718559-41718578 None:intergenic 40.0%
!! CACATGATGACGGCCAAAAT+AGG + chr7_4:41716235-41716254 Msa1154280:CDS 45.0%
GTAGGGTAAGATATCGGCAT+CGG + chr7_4:41716402-41716421 Msa1154280:intron 45.0%
! TATCGGCATCGGATATCAAG+CGG + chr7_4:41716413-41716432 Msa1154280:CDS 45.0%
!! AAGCGGATTGCAAAAGAGCT+AGG + chr7_4:41716430-41716449 Msa1154280:CDS 45.0%
! CTGTAACTTGCAAGATGGAG+TGG - chr7_4:41717091-41717110 None:intergenic 45.0%
GAATCGAACATGTGACCTAG+AGG - chr7_4:41717282-41717301 None:intergenic 45.0%
AAGTTTAGCGTTCCTGCTGA+AGG + chr7_4:41717347-41717366 Msa1154280:intron 45.0%
ATGTTCTGCCATATGGTAGC+GGG + chr7_4:41717372-41717391 Msa1154280:intron 45.0%
TACACACGATGCATAGGACT+TGG + chr7_4:41717532-41717551 Msa1154280:intron 45.0%
ACTTGGACATGCGATTTAGC+TGG + chr7_4:41717549-41717568 Msa1154280:intron 45.0%
CGGTCAAAGGTCAGTTACAA+TGG + chr7_4:41717609-41717628 Msa1154280:intron 45.0%
! ACAAGCAGGGAAAGTGTATG+GGG - chr7_4:41717800-41717819 None:intergenic 45.0%
! GTACAAGCAGGGAAAGTGTA+TGG - chr7_4:41717802-41717821 None:intergenic 45.0%
!! ATCGAGTAGTTAGCTTTGGC+TGG + chr7_4:41718178-41718197 Msa1154280:three_prime_UTR 45.0%
CTGTTTGGACCAAATGCAAC+TGG + chr7_4:41718354-41718373 Msa1154280:three_prime_UTR 45.0%
CTACTGTTCCCAGTTGCATT+TGG - chr7_4:41718366-41718385 None:intergenic 45.0%
!! ACTTGCTCTGGAATGGTTGT+CGG - chr7_4:41718547-41718566 None:intergenic 45.0%
!! GTGTGTTACTTGCTCTGGAA+TGG - chr7_4:41718554-41718573 None:intergenic 45.0%
!! CACATGATGACGGCCAAAAT+AGG + chr7_4:41716235-41716254 Msa1154280:CDS 45.0%
GTAGGGTAAGATATCGGCAT+CGG + chr7_4:41716402-41716421 Msa1154280:intron 45.0%
! TATCGGCATCGGATATCAAG+CGG + chr7_4:41716413-41716432 Msa1154280:CDS 45.0%
!! AAGCGGATTGCAAAAGAGCT+AGG + chr7_4:41716430-41716449 Msa1154280:CDS 45.0%
! CTGTAACTTGCAAGATGGAG+TGG - chr7_4:41717091-41717110 None:intergenic 45.0%
GAATCGAACATGTGACCTAG+AGG - chr7_4:41717282-41717301 None:intergenic 45.0%
AAGTTTAGCGTTCCTGCTGA+AGG + chr7_4:41717347-41717366 Msa1154280:intron 45.0%
ATGTTCTGCCATATGGTAGC+GGG + chr7_4:41717372-41717391 Msa1154280:intron 45.0%
TACACACGATGCATAGGACT+TGG + chr7_4:41717532-41717551 Msa1154280:intron 45.0%
ACTTGGACATGCGATTTAGC+TGG + chr7_4:41717549-41717568 Msa1154280:intron 45.0%
CGGTCAAAGGTCAGTTACAA+TGG + chr7_4:41717609-41717628 Msa1154280:intron 45.0%
! ACAAGCAGGGAAAGTGTATG+GGG - chr7_4:41717800-41717819 None:intergenic 45.0%
! GTACAAGCAGGGAAAGTGTA+TGG - chr7_4:41717802-41717821 None:intergenic 45.0%
!! ATCGAGTAGTTAGCTTTGGC+TGG + chr7_4:41718178-41718197 Msa1154280:three_prime_UTR 45.0%
CTGTTTGGACCAAATGCAAC+TGG + chr7_4:41718354-41718373 Msa1154280:three_prime_UTR 45.0%
CTACTGTTCCCAGTTGCATT+TGG - chr7_4:41718366-41718385 None:intergenic 45.0%
!! ACTTGCTCTGGAATGGTTGT+CGG - chr7_4:41718547-41718566 None:intergenic 45.0%
!! GTGTGTTACTTGCTCTGGAA+TGG - chr7_4:41718554-41718573 None:intergenic 45.0%
ATAGCAGATGTCGACAGGGA+TGG + chr7_4:41716181-41716200 Msa1154280:CDS 50.0%
TAGCAGATGTCGACAGGGAT+GGG + chr7_4:41716182-41716201 Msa1154280:CDS 50.0%
CGTTCATAACCCACTTCGGT+TGG + chr7_4:41717218-41717237 Msa1154280:intron 50.0%
TCGAACATGTGACCTAGAGG+AGG - chr7_4:41717279-41717298 None:intergenic 50.0%
GTCACATGTTCGATTCTCCC+CGG + chr7_4:41717286-41717305 Msa1154280:intron 50.0%
! ATTCTCCCCGGTGCCAATTT+GGG + chr7_4:41717298-41717317 Msa1154280:intron 50.0%
TAACCCACCCAAATTGGCAC+CGG - chr7_4:41717308-41717327 None:intergenic 50.0%
GGCAGAACATATCCTTCAGC+AGG - chr7_4:41717362-41717381 None:intergenic 50.0%
! TGTTCTGCCATATGGTAGCG+GGG + chr7_4:41717373-41717392 Msa1154280:intron 50.0%
AGGTTCACAGCCATATCACC+TGG + chr7_4:41717487-41717506 Msa1154280:intron 50.0%
!! GGTGCTATTTGGTCGGTCAA+AGG + chr7_4:41717596-41717615 Msa1154280:intron 50.0%
! TGTGACTTGTGAGGGGAAAC+TGG + chr7_4:41717718-41717737 Msa1154280:intron 50.0%
! CAAGCAGGGAAAGTGTATGG+GGG - chr7_4:41717799-41717818 None:intergenic 50.0%
ACTAAACGGGGGGTTTGCAT+TGG + chr7_4:41717929-41717948 Msa1154280:intron 50.0%
! TGATCGAGAGGTTGATCCAG+AGG + chr7_4:41718104-41718123 Msa1154280:CDS 50.0%
CTGGAATGGTTGTCGGAGTT+GGG - chr7_4:41718540-41718559 None:intergenic 50.0%
! TCTGGAATGGTTGTCGGAGT+TGG - chr7_4:41718541-41718560 None:intergenic 50.0%
ATAGCAGATGTCGACAGGGA+TGG + chr7_4:41716181-41716200 Msa1154280:CDS 50.0%
TAGCAGATGTCGACAGGGAT+GGG + chr7_4:41716182-41716201 Msa1154280:CDS 50.0%
CGTTCATAACCCACTTCGGT+TGG + chr7_4:41717218-41717237 Msa1154280:intron 50.0%
TCGAACATGTGACCTAGAGG+AGG - chr7_4:41717279-41717298 None:intergenic 50.0%
GTCACATGTTCGATTCTCCC+CGG + chr7_4:41717286-41717305 Msa1154280:intron 50.0%
! ATTCTCCCCGGTGCCAATTT+GGG + chr7_4:41717298-41717317 Msa1154280:intron 50.0%
TAACCCACCCAAATTGGCAC+CGG - chr7_4:41717308-41717327 None:intergenic 50.0%
GGCAGAACATATCCTTCAGC+AGG - chr7_4:41717362-41717381 None:intergenic 50.0%
! TGTTCTGCCATATGGTAGCG+GGG + chr7_4:41717373-41717392 Msa1154280:intron 50.0%
AGGTTCACAGCCATATCACC+TGG + chr7_4:41717487-41717506 Msa1154280:intron 50.0%
!! GGTGCTATTTGGTCGGTCAA+AGG + chr7_4:41717596-41717615 Msa1154280:intron 50.0%
! TGTGACTTGTGAGGGGAAAC+TGG + chr7_4:41717718-41717737 Msa1154280:intron 50.0%
! CAAGCAGGGAAAGTGTATGG+GGG - chr7_4:41717799-41717818 None:intergenic 50.0%
ACTAAACGGGGGGTTTGCAT+TGG + chr7_4:41717929-41717948 Msa1154280:intron 50.0%
! TGATCGAGAGGTTGATCCAG+AGG + chr7_4:41718104-41718123 Msa1154280:CDS 50.0%
CTGGAATGGTTGTCGGAGTT+GGG - chr7_4:41718540-41718559 None:intergenic 50.0%
! TCTGGAATGGTTGTCGGAGT+TGG - chr7_4:41718541-41718560 None:intergenic 50.0%
TCATTCTACGGTGAGCTGGG+TGG + chr7_4:41716587-41716606 Msa1154280:intron 55.0%
ACCATCAGGCCAACCGAAGT+GGG - chr7_4:41717230-41717249 None:intergenic 55.0%
!! TTCGGTTGGCCTGATGGTGT+TGG + chr7_4:41717232-41717251 Msa1154280:intron 55.0%
!! TTGGCCTGATGGTGTTGGCT+TGG + chr7_4:41717237-41717256 Msa1154280:intron 55.0%
!! TGGCCTGATGGTGTTGGCTT+GGG + chr7_4:41717238-41717257 Msa1154280:intron 55.0%
GATCCCAAGCCAACACCATC+AGG - chr7_4:41717244-41717263 None:intergenic 55.0%
! CTAGAGGAGGAGCACACTCT+AGG - chr7_4:41717266-41717285 None:intergenic 55.0%
CTAGAGTGTGCTCCTCCTCT+AGG + chr7_4:41717264-41717283 Msa1154280:intron 55.0%
! GATTCTCCCCGGTGCCAATT+TGG + chr7_4:41717297-41717316 Msa1154280:intron 55.0%
AACCCACCCAAATTGGCACC+GGG - chr7_4:41717307-41717326 None:intergenic 55.0%
AGTCCTTCCCCGCTACCATA+TGG - chr7_4:41717383-41717402 None:intergenic 55.0%
TCATTCTACGGTGAGCTGGG+TGG + chr7_4:41716587-41716606 Msa1154280:intron 55.0%
ACCATCAGGCCAACCGAAGT+GGG - chr7_4:41717230-41717249 None:intergenic 55.0%
!! TTCGGTTGGCCTGATGGTGT+TGG + chr7_4:41717232-41717251 Msa1154280:intron 55.0%
!! TTGGCCTGATGGTGTTGGCT+TGG + chr7_4:41717237-41717256 Msa1154280:intron 55.0%
!! TGGCCTGATGGTGTTGGCTT+GGG + chr7_4:41717238-41717257 Msa1154280:intron 55.0%
GATCCCAAGCCAACACCATC+AGG - chr7_4:41717244-41717263 None:intergenic 55.0%
! CTAGAGGAGGAGCACACTCT+AGG - chr7_4:41717266-41717285 None:intergenic 55.0%
CTAGAGTGTGCTCCTCCTCT+AGG + chr7_4:41717264-41717283 Msa1154280:intron 55.0%
! GATTCTCCCCGGTGCCAATT+TGG + chr7_4:41717297-41717316 Msa1154280:intron 55.0%
AACCCACCCAAATTGGCACC+GGG - chr7_4:41717307-41717326 None:intergenic 55.0%
AGTCCTTCCCCGCTACCATA+TGG - chr7_4:41717383-41717402 None:intergenic 55.0%
GATGTCGACAGGGATGGGAG+TGG + chr7_4:41716187-41716206 Msa1154280:CDS 60.0%
!! ACCCACTTCGGTTGGCCTGA+TGG + chr7_4:41717226-41717245 Msa1154280:intron 60.0%
CACCATCAGGCCAACCGAAG+TGG - chr7_4:41717231-41717250 None:intergenic 60.0%
! TCCCCGGTGCCAATTTGGGT+GGG + chr7_4:41717302-41717321 Msa1154280:intron 60.0%
ACCCACCCAAATTGGCACCG+GGG - chr7_4:41717306-41717325 None:intergenic 60.0%
!! CTGCCATATGGTAGCGGGGA+AGG + chr7_4:41717377-41717396 Msa1154280:intron 60.0%
GATGTCGACAGGGATGGGAG+TGG + chr7_4:41716187-41716206 Msa1154280:CDS 60.0%
!! ACCCACTTCGGTTGGCCTGA+TGG + chr7_4:41717226-41717245 Msa1154280:intron 60.0%
CACCATCAGGCCAACCGAAG+TGG - chr7_4:41717231-41717250 None:intergenic 60.0%
! TCCCCGGTGCCAATTTGGGT+GGG + chr7_4:41717302-41717321 Msa1154280:intron 60.0%
ACCCACCCAAATTGGCACCG+GGG - chr7_4:41717306-41717325 None:intergenic 60.0%
!! CTGCCATATGGTAGCGGGGA+AGG + chr7_4:41717377-41717396 Msa1154280:intron 60.0%
! CTCCCCGGTGCCAATTTGGG+TGG + chr7_4:41717301-41717320 Msa1154280:intron 65.0%
! CTCCCCGGTGCCAATTTGGG+TGG + chr7_4:41717301-41717320 Msa1154280:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 41716160 41718583 41716160 ID=Msa1154280;Name=Msa1154280
chr7_4 mRNA 41716160 41718583 41716160 ID=Msa1154280-mRNA-1;Parent=Msa1154280;Name=Msa1154280-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|1|1|1|1|3|416|108
chr7_4 exon 41716160 41716318 41716160 ID=Msa1154280-mRNA-1:exon:10163;Parent=Msa1154280-mRNA-1
chr7_4 exon 41716406 41716508 41716406 ID=Msa1154280-mRNA-1:exon:10164;Parent=Msa1154280-mRNA-1
chr7_4 exon 41718103 41718583 41718103 ID=Msa1154280-mRNA-1:exon:10165;Parent=Msa1154280-mRNA-1
chr7_4 CDS 41716160 41716318 41716160 ID=Msa1154280-mRNA-1:cds;Parent=Msa1154280-mRNA-1
chr7_4 CDS 41716406 41716508 41716406 ID=Msa1154280-mRNA-1:cds;Parent=Msa1154280-mRNA-1
chr7_4 CDS 41718103 41718167 41718103 ID=Msa1154280-mRNA-1:cds;Parent=Msa1154280-mRNA-1
chr7_4 three_prime_UTR 41718168 41718583 41718168 ID=Msa1154280-mRNA-1:three_prime_utr;Parent=Msa1154280-mRNA-1
Gene Sequence

>Msa1154280

TTTCAGCAAATTGATCAAATGATAGCAGATGTCGACAGGGATGGGAGTGGAGCAATCGACTATGATGAATTTGAGCACATGATGACGGCCAAAATAGGAGAAAGAGACACTAAAGAGGAGCTCATGAAAGCTTTCCATATTATTGATCAAGACAAAAATGGTAAGATATCGGCATCGGATATCAAGCGGATTGCAAAAGAGCTAGGTCAAAATTTTACTGATAGAGAGATTCAGGAGATGGTTGATGAAGCAGACCAAAATAATGATCGAGAGGTTGATCCAGAGGAGTTCATCATGATGATGAACACAACAGGCTACCGTCACTAG

Protein sequence

>Msa1154280

FQQIDQMIADVDRDGSGAIDYDEFEHMMTAKIGERDTKEELMKAFHIIDQDKNGKISASDIKRIAKELGQNFTDREIQEMVDEADQNNDREVDPEEFIMMMNTTGYRH*