Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869860 | XP_024642404.1 | 89.957 | 468 | 17 | 4 | 15 | 452 | 1 | 468 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869860 | A0A396HB38 | 89.957 | 468 | 17 | 4 | 15 | 452 | 1 | 468 | 0.0 | 845 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001240 | Msa0869860 | 0.801177 | 1.018100e-48 | -8.615850e-47 |
| Msa0004920 | Msa0869860 | 0.808279 | 3.349086e-50 | -8.615850e-47 |
| Msa0006070 | Msa0869860 | 0.804975 | 1.668960e-49 | -8.615850e-47 |
| Msa0020930 | Msa0869860 | 0.824178 | 9.291432e-54 | -8.615850e-47 |
| Msa0068680 | Msa0869860 | 0.800114 | 1.677238e-48 | -8.615850e-47 |
| Msa0114060 | Msa0869860 | 0.819743 | 9.892213e-53 | -8.615850e-47 |
| Msa0661190 | Msa0869860 | -0.811134 | 8.151160e-51 | -8.615850e-47 |
| Msa0695100 | Msa0869860 | 0.801937 | 7.114222e-49 | -8.615850e-47 |
| Msa0698400 | Msa0869860 | 0.801586 | 8.397348e-49 | -8.615850e-47 |
| Msa0159930 | Msa0869860 | 0.829294 | 5.578451e-55 | -8.615850e-47 |
| Msa0189320 | Msa0869860 | 0.803262 | 3.791597e-49 | -8.615850e-47 |
| Msa0224320 | Msa0869860 | 0.818732 | 1.680931e-52 | -8.615850e-47 |
| Msa0410650 | Msa0869860 | 0.814023 | 1.902827e-51 | -8.615850e-47 |
| Msa0436760 | Msa0869860 | 0.802141 | 6.458676e-49 | -8.615850e-47 |
| Msa0440750 | Msa0869860 | 0.805973 | 1.030386e-49 | -8.615850e-47 |
| Msa0479170 | Msa0869860 | 0.831624 | 1.502135e-55 | -8.615850e-47 |
| Msa0239480 | Msa0869860 | 0.802059 | 6.713972e-49 | -8.615850e-47 |
| Msa0260680 | Msa0869860 | 0.809572 | 1.771007e-50 | -8.615850e-47 |
| Msa0309770 | Msa0869860 | 0.853230 | 2.740768e-61 | -8.615850e-47 |
| Msa0345970 | Msa0869860 | 0.803957 | 2.720194e-49 | -8.615850e-47 |
| Msa0507680 | Msa0869860 | 0.818105 | 2.331969e-52 | -8.615850e-47 |
| Msa0596800 | Msa0869860 | 0.808104 | 3.647860e-50 | -8.615850e-47 |
| Msa0869860 | Msa0871270 | 0.801949 | 7.074374e-49 | -8.615850e-47 |
| Msa0869860 | Msa0895120 | 0.812054 | 5.141111e-51 | -8.615850e-47 |
| Msa0869860 | Msa0931720 | 0.807072 | 6.043595e-50 | -8.615850e-47 |
| Msa0869860 | Msa0935670 | 0.811656 | 6.276718e-51 | -8.615850e-47 |
| Msa0869860 | Msa1017630 | 0.801899 | 7.241023e-49 | -8.615850e-47 |
| Msa0869860 | Msa1046350 | 0.806876 | 6.647692e-50 | -8.615850e-47 |
| Msa0869860 | Msa1082500 | 0.816015 | 6.874695e-52 | -8.615850e-47 |
| Msa0869860 | Msa1085200 | 0.814647 | 1.384648e-51 | -8.615850e-47 |
| Msa0869860 | Msa1296760 | 0.811700 | 6.139593e-51 | -8.615850e-47 |
| Msa0869860 | Msa1320410 | 0.803616 | 3.201741e-49 | -8.615850e-47 |
| Msa0869860 | Msa1324100 | 0.800331 | 1.515213e-48 | -8.615850e-47 |
| Msa0869860 | Msa1452240 | 0.802695 | 4.964967e-49 | -8.615850e-47 |
| Msa0869860 | Msa1460050 | 0.806917 | 6.517330e-50 | -8.615850e-47 |
| Msa0869860 | Msa1464810 | 0.821247 | 4.468367e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869860 | MtrunA17_Chr6g0451441 | 89.957 | 468 | 17 | 4 | 15 | 452 | 1 | 468 | 0.0 | 845 |
| Msa0869860 | MtrunA17_Chr5g0441581 | 50.000 | 238 | 58 | 6 | 15 | 237 | 1 | 192 | 3.57e-57 | 200 |
| Msa0869860 | MtrunA17_Chr6g0451421 | 56.757 | 148 | 56 | 1 | 302 | 449 | 6 | 145 | 5.50e-46 | 156 |
| Msa0869860 | MtrunA17_Chr6g0451411 | 51.656 | 151 | 65 | 1 | 299 | 449 | 171 | 313 | 2.64e-39 | 144 |
| Msa0869860 | MtrunA17_Chr2g0329701 | 47.297 | 148 | 70 | 1 | 304 | 451 | 234 | 373 | 3.50e-35 | 134 |
| Msa0869860 | MtrunA17_Chr2g0325301 | 44.371 | 151 | 76 | 1 | 297 | 447 | 3 | 145 | 4.42e-35 | 127 |
| Msa0869860 | MtrunA17_Chr7g0264421 | 47.586 | 145 | 68 | 1 | 304 | 448 | 204 | 340 | 4.27e-33 | 127 |
| Msa0869860 | MtrunA17_Chr6g0451451 | 51.163 | 86 | 42 | 0 | 366 | 451 | 1 | 86 | 2.97e-20 | 85.1 |
| Msa0869860 | MtrunA17_Chr2g0296781 | 27.586 | 203 | 118 | 8 | 100 | 283 | 22 | 214 | 1.33e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869860 | AT3G01410.2 | 47.333 | 150 | 71 | 1 | 298 | 447 | 148 | 289 | 1.26e-33 | 128 |
| Msa0869860 | AT3G01410.1 | 47.333 | 150 | 71 | 1 | 298 | 447 | 148 | 289 | 1.26e-33 | 128 |
| Msa0869860 | AT5G51080.3 | 46.528 | 144 | 69 | 1 | 304 | 447 | 122 | 257 | 7.03e-30 | 117 |
| Msa0869860 | AT5G51080.1 | 46.528 | 144 | 69 | 1 | 304 | 447 | 185 | 320 | 2.20e-29 | 117 |
| Msa0869860 | AT5G51080.2 | 46.528 | 144 | 69 | 1 | 304 | 447 | 185 | 320 | 2.20e-29 | 117 |
| Msa0869860 | AT1G24090.1 | 44.872 | 156 | 76 | 2 | 294 | 447 | 204 | 351 | 5.16e-28 | 114 |
Find 124 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAACTTAATGCAAATTT+TGG | 0.148842 | 6_1:-4148215 | None:intergenic |
| CATGGATAGTTCAAAGAATT+TGG | 0.188161 | 6_1:+4147775 | Msa0869860:CDS |
| CCCACATCTCGTTTGCAAAA+TGG | 0.190562 | 6_1:-4148439 | None:intergenic |
| CACGTCCAAAATTTAAAATT+TGG | 0.193745 | 6_1:-4152846 | None:intergenic |
| GAGTATCGGGCTTTACTCTT+AGG | 0.200750 | 6_1:+4150727 | Msa0869860:CDS |
| TTGAACAATCTTCCCTTTGC+AGG | 0.228786 | 6_1:-4148295 | None:intergenic |
| TATGTTCCTTTGTAGCTCTA+TGG | 0.232618 | 6_1:+4150664 | Msa0869860:intron |
| TATCAAAAGGAAGTTTCATT+TGG | 0.290430 | 6_1:-4152676 | None:intergenic |
| CACCCTCAATTGGAACTTCA+TGG | 0.294029 | 6_1:+4147757 | Msa0869860:CDS |
| ATCAAAAGGAAGTTTCATTT+GGG | 0.305769 | 6_1:-4152675 | None:intergenic |
| GAAATTATGTGCTGAGGCTT+TGG | 0.322454 | 6_1:+4151207 | Msa0869860:CDS |
| CTCCTGGATCATCAGTGCTT+TGG | 0.328920 | 6_1:-4148357 | None:intergenic |
| TCCGCATCCAACACATTTCC+AGG | 0.335217 | 6_1:+4151254 | Msa0869860:CDS |
| CTCGGAACTTGTTATCAATC+AGG | 0.350472 | 6_1:+4150801 | Msa0869860:CDS |
| GCGGGCTTCTCACAATCATT+TGG | 0.351584 | 6_1:-4152888 | None:intergenic |
| GTCATGACATTAAACACATT+TGG | 0.363151 | 6_1:-4152651 | None:intergenic |
| GCACGTTGGAAGCCTGAAAC+AGG | 0.364470 | 6_1:+4147989 | Msa0869860:CDS |
| CAACCTCTTGTTAAAGATGT+AGG | 0.366945 | 6_1:+4148400 | Msa0869860:CDS |
| TACTTAATTTAGCCTATGTT+TGG | 0.367331 | 6_1:+4152940 | Msa0869860:intron |
| AATCATTTGGATTTAAAATC+CGG | 0.367748 | 6_1:-4152875 | None:intergenic |
| ATGTTTAAGGAACGTAACTA+TGG | 0.371416 | 6_1:+4151703 | Msa0869860:intron |
| CTTTCTTGTATCCTTGAGTT+TGG | 0.375582 | 6_1:+4150474 | Msa0869860:CDS |
| ATGTTCCTTTGTAGCTCTAT+GGG | 0.375904 | 6_1:+4150665 | Msa0869860:intron |
| ACATCAAGAAAAGGAGATAA+TGG | 0.382507 | 6_1:+4148094 | Msa0869860:CDS |
| TTGGCACTTTCACCCTCAAT+TGG | 0.385346 | 6_1:+4147747 | Msa0869860:CDS |
| AGCCAAAATTTGCATTAAGT+TGG | 0.392434 | 6_1:+4148213 | Msa0869860:CDS |
| CTATGGGTTTCGCCAAGGAC+TGG | 0.394553 | 6_1:+4150681 | Msa0869860:CDS |
| TGAGTTTGGCGGTGTATCCA+TGG | 0.404103 | 6_1:+4150488 | Msa0869860:CDS |
| GCTTTACTGCTTGCTGAAGA+TGG | 0.412974 | 6_1:+4150561 | Msa0869860:CDS |
| TAGATGACCGCCATGTGATT+AGG | 0.413691 | 6_1:+4152549 | Msa0869860:three_prime_UTR |
| GATGCCTTTGGTACGCTTCA+AGG | 0.415125 | 6_1:+4148819 | Msa0869860:CDS |
| TACAAGGAACGACATGCAAT+TGG | 0.415503 | 6_1:+4148472 | Msa0869860:CDS |
| AACAAGTTCCGAGTCTCCTT+TGG | 0.419868 | 6_1:-4150791 | None:intergenic |
| CCTAGCAATTTAGCATATTG+AGG | 0.422616 | 6_1:+4152444 | Msa0869860:three_prime_UTR |
| GAAGCGAATAAGTGAAAGAA+TGG | 0.425911 | 6_1:+4148731 | Msa0869860:CDS |
| GAGTTTGGCGGTGTATCCAT+GGG | 0.427150 | 6_1:+4150489 | Msa0869860:CDS |
| AAAAGAGTCCGCTGAGTATC+GGG | 0.427646 | 6_1:+4150714 | Msa0869860:CDS |
| GGTCTAACCATTGAGATTGA+TGG | 0.430662 | 6_1:-4151749 | None:intergenic |
| AGTATCGGGCTTTACTCTTA+GGG | 0.446841 | 6_1:+4150728 | Msa0869860:CDS |
| TTGTTTGGTGACCCAGTCCT+TGG | 0.447831 | 6_1:-4150693 | None:intergenic |
| AACCATTGAGATTGATGGCC+CGG | 0.448402 | 6_1:-4151744 | None:intergenic |
| CCAAAATTTAAAATTTGGAG+AGG | 0.448824 | 6_1:-4152841 | None:intergenic |
| CGCGTCCAGAGGCTCATATA+AGG | 0.449099 | 6_1:+4152984 | Msa0869860:three_prime_UTR |
| TGCAACAGATTCTGGATCCC+TGG | 0.450769 | 6_1:+4151161 | Msa0869860:intron |
| GTCTTCTTGATCCTCACTCC+TGG | 0.453631 | 6_1:-4148373 | None:intergenic |
| GAAGATTGTTCAAGGCCAAC+AGG | 0.454391 | 6_1:+4148305 | Msa0869860:CDS |
| GAGCTGTTCGTAATGCAAAC+CGG | 0.456358 | 6_1:+4151725 | Msa0869860:CDS |
| TTTCACCTTATATGAGCCTC+TGG | 0.460128 | 6_1:-4152989 | None:intergenic |
| CAAAAGAGTCCGCTGAGTAT+CGG | 0.473133 | 6_1:+4150713 | Msa0869860:CDS |
| AACATTAATCGTGGACCAGC+AGG | 0.474775 | 6_1:+4150531 | Msa0869860:CDS |
| TATGGGTTTCGCCAAGGACT+GGG | 0.476797 | 6_1:+4150682 | Msa0869860:CDS |
| CTTTACTGCTTGCTGAAGAT+GGG | 0.482053 | 6_1:+4150562 | Msa0869860:CDS |
| GCTTGCTGAAGATGGGAGTC+TGG | 0.485253 | 6_1:+4150569 | Msa0869860:CDS |
| TTTCTCACCTGTTGTTTCGT+TGG | 0.486096 | 6_1:-4148873 | None:intergenic |
| ATCCATGAAGTTCCAATTGA+GGG | 0.487570 | 6_1:-4147759 | None:intergenic |
| TCTTGTATCCTTGAGTTTGG+CGG | 0.487937 | 6_1:+4150477 | Msa0869860:CDS |
| AATCGAATCACAGATGCCTT+TGG | 0.490469 | 6_1:+4148807 | Msa0869860:CDS |
| CAAAATTTAAAATTTGGAGA+GGG | 0.496949 | 6_1:-4152840 | None:intergenic |
| CAGGGCTAGTCTCGTGAGAA+TGG | 0.497072 | 6_1:-4148276 | None:intergenic |
| TCAAAGAATTTGGTAGATTG+TGG | 0.500305 | 6_1:+4147785 | Msa0869860:CDS |
| AAGATTAGAACATCAAGAAA+AGG | 0.501587 | 6_1:+4148085 | Msa0869860:CDS |
| CCTCAATATGCTAAATTGCT+AGG | 0.505468 | 6_1:-4152444 | None:intergenic |
| CGACATGCAATTGGAAAAGA+AGG | 0.505598 | 6_1:+4148481 | Msa0869860:CDS |
| TAATTTAGCCTATGTTTGGT+TGG | 0.510180 | 6_1:+4152944 | Msa0869860:three_prime_UTR |
| TGCAAAGGGAAGATTGTTCA+AGG | 0.511618 | 6_1:+4148297 | Msa0869860:CDS |
| TTTAAGTATGTTACTGCCAA+AGG | 0.514586 | 6_1:+4150775 | Msa0869860:CDS |
| AACTTGCGATTGAGTACCAT+GGG | 0.516525 | 6_1:-4148847 | None:intergenic |
| AGTTAAACCAACGAAACAAC+AGG | 0.521052 | 6_1:+4148866 | Msa0869860:CDS |
| AATCGTGGACCAGCAGGTGC+AGG | 0.529975 | 6_1:+4150537 | Msa0869860:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6_1:+4147869 | Msa0869860:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6_1:+4147902 | Msa0869860:CDS |
| ATGCCTTTGGTACGCTTCAA+GGG | 0.531070 | 6_1:+4148820 | Msa0869860:CDS |
| AAAATACCCTGGAAATGTGT+TGG | 0.533351 | 6_1:-4151261 | None:intergenic |
| TTGAAACATGCGAGTATGAA+AGG | 0.534654 | 6_1:+4150751 | Msa0869860:CDS |
| TGAACAATCTTCCCTTTGCA+GGG | 0.541033 | 6_1:-4148294 | None:intergenic |
| ATCCAAAGCACTGATGATCC+AGG | 0.543376 | 6_1:+4148355 | Msa0869860:CDS |
| TTTAAAGAAATTATGTGCTG+AGG | 0.544923 | 6_1:+4151201 | Msa0869860:CDS |
| TAGTTGTCAATAGTTTGTTA+CGG | 0.546320 | 6_1:-4152391 | None:intergenic |
| TATCCATGAAGTTCCAATTG+AGG | 0.548714 | 6_1:-4147760 | None:intergenic |
| TGAGATAATGTGTGGTGGGT+GGG | 0.550449 | 6_1:+4153032 | Msa0869860:three_prime_UTR |
| TAGCTCTATGGGTTTCGCCA+AGG | 0.553648 | 6_1:+4150676 | Msa0869860:intron |
| AACCGGGCCATCAATCTCAA+TGG | 0.553661 | 6_1:+4151742 | Msa0869860:CDS |
| TGTGGGAAATTATGTTTACA+AGG | 0.554375 | 6_1:+4148456 | Msa0869860:CDS |
| CACGAGACTAGCCCTGCAAA+GGG | 0.557494 | 6_1:+4148283 | Msa0869860:CDS |
| TCACGAGACTAGCCCTGCAA+AGG | 0.558154 | 6_1:+4148282 | Msa0869860:CDS |
| AGCTGCTAGAAAAGATAGAG+TGG | 0.558261 | 6_1:+4148769 | Msa0869860:CDS |
| AGTAAAGCTCCTGCACCTGC+TGG | 0.558433 | 6_1:-4150546 | None:intergenic |
| GATAACTCGAATGATAATGA+AGG | 0.559715 | 6_1:+4147836 | Msa0869860:CDS |
| TTGAGATAATGTGTGGTGGG+TGG | 0.561529 | 6_1:+4153031 | Msa0869860:three_prime_UTR |
| AAAATTTAAAATTTGGAGAG+GGG | 0.564189 | 6_1:-4152839 | None:intergenic |
| TTGTAAGCAACATTTGACCT+TGG | 0.567467 | 6_1:-4152498 | None:intergenic |
| TGGCGGTCATCTATACATCA+TGG | 0.569222 | 6_1:-4152539 | None:intergenic |
| TGGATACACCGCCAAACTCA+AGG | 0.570316 | 6_1:-4150485 | None:intergenic |
| AATTCTTGCTTGCTCAAGAG+AGG | 0.580330 | 6_1:+4148132 | Msa0869860:CDS |
| TGCATTAAGTTGGAAGACGA+TGG | 0.588214 | 6_1:+4148223 | Msa0869860:CDS |
| AGCTGTTCGTAATGCAAACC+GGG | 0.588529 | 6_1:+4151726 | Msa0869860:CDS |
| CAAAAGGAAGTTTCATTTGG+GGG | 0.590000 | 6_1:-4152673 | None:intergenic |
| GCATTAATCATCGTCAGAGA+CGG | 0.592211 | 6_1:+4152361 | Msa0869860:exon |
| GTGTTGAGATAATGTGTGGT+GGG | 0.592269 | 6_1:+4153028 | Msa0869860:three_prime_UTR |
| AATTTAATTTCCTAATCACA+TGG | 0.597052 | 6_1:-4152559 | None:intergenic |
| ATTCTTGCTTGCTCAAGAGA+GGG | 0.604718 | 6_1:+4148133 | Msa0869860:CDS |
| CCCTGGAAATGTGTTGGATG+CGG | 0.605910 | 6_1:-4151255 | None:intergenic |
| TTGTCAATAGTTTGTTACGG+TGG | 0.605927 | 6_1:-4152388 | None:intergenic |
| GCTCCTACATCTTTAACAAG+AGG | 0.607465 | 6_1:-4148403 | None:intergenic |
| CTATACAATCTCGCGTCCAG+AGG | 0.611960 | 6_1:+4152973 | Msa0869860:three_prime_UTR |
| TGTTACTGCCAAAGGAGACT+CGG | 0.617844 | 6_1:+4150783 | Msa0869860:CDS |
| CCGCATCCAACACATTTCCA+GGG | 0.618262 | 6_1:+4151255 | Msa0869860:CDS |
| AGACAACAACACAAGAATGA+CGG | 0.620719 | 6_1:+4148692 | Msa0869860:intron |
| TCAAAAGGAAGTTTCATTTG+GGG | 0.623558 | 6_1:-4152674 | None:intergenic |
| AGTTTGGCGGTGTATCCATG+GGG | 0.626952 | 6_1:+4150490 | Msa0869860:CDS |
| TAACTTGCGATTGAGTACCA+TGG | 0.626961 | 6_1:-4148848 | None:intergenic |
| AGTGTTGAGATAATGTGTGG+TGG | 0.627357 | 6_1:+4153027 | Msa0869860:three_prime_UTR |
| AGTATGACACTGCATGTCCA+AGG | 0.627567 | 6_1:+4152481 | Msa0869860:three_prime_UTR |
| CACGTTGGAAGCCTGAAACA+GGG | 0.628231 | 6_1:+4147990 | Msa0869860:CDS |
| ATACCCTTGAAGCGTACCAA+AGG | 0.631445 | 6_1:-4148823 | None:intergenic |
| AGCAACGTCCAACCAAACAT+AGG | 0.638317 | 6_1:-4152952 | None:intergenic |
| GGTGATCTAAACATTAATCG+TGG | 0.639032 | 6_1:+4150522 | Msa0869860:CDS |
| ACGCTTCAAGGGTATTCCCA+TGG | 0.642120 | 6_1:+4148831 | Msa0869860:CDS |
| GCACTGATGATCCAGGAGTG+AGG | 0.654669 | 6_1:+4148362 | Msa0869860:CDS |
| CTATTGATGATGAAGCACGT+TGG | 0.690174 | 6_1:+4147975 | Msa0869860:CDS |
| TGCAGTGTTGAGATAATGTG+TGG | 0.695391 | 6_1:+4153024 | Msa0869860:three_prime_UTR |
| GTTTGGCGGTGTATCCATGG+GGG | 0.709941 | 6_1:+4150491 | Msa0869860:CDS |
| GAGTAAAGCCCGATACTCAG+CGG | 0.716233 | 6_1:-4150722 | None:intergenic |
| TTAATTTCCTAATCACATGG+CGG | 0.720834 | 6_1:-4152556 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTGATTATTTATGTT+TGG | + | chr6_1:4146519-4146538 | Msa0869860:intron | 10.0% |
| !! | ATGTAAATATTCATATAATT+AGG | - | chr6_1:4151603-4151622 | None:intergenic | 10.0% |
| !!! | ATGTATTTTTTTAATGTTTA+AGG | + | chr6_1:4151690-4151709 | Msa0869860:intron | 10.0% |
| !!! | AATGATTTTTTCTTTTTAAA+TGG | - | chr6_1:4152913-4152932 | None:intergenic | 10.0% |
| !! | TTATATATATTTCGTGAATA+TGG | - | chr6_1:4144859-4144878 | None:intergenic | 15.0% |
| !! | AATAGTTATAATCAAACAAA+TGG | + | chr6_1:4144908-4144927 | Msa0869860:intron | 15.0% |
| !!! | AATAAGTTATGTTTTATGTA+TGG | + | chr6_1:4145110-4145129 | Msa0869860:intron | 15.0% |
| !!! | GTGAATTTAGTTTTTAATTT+TGG | - | chr6_1:4145789-4145808 | None:intergenic | 15.0% |
| !! | AATATAAATGTTGTGAAAAA+TGG | - | chr6_1:4145811-4145830 | None:intergenic | 15.0% |
| !! | CAAATATAAAATTAGAAACT+TGG | - | chr6_1:4146386-4146405 | None:intergenic | 15.0% |
| !! | GAATATATTAATGTAAAAGA+AGG | - | chr6_1:4147070-4147089 | None:intergenic | 15.0% |
| !! | CAAGTAAATAATTAATTACA+AGG | - | chr6_1:4147609-4147628 | None:intergenic | 15.0% |
| !! | ATTTCCAAAATATTATAGAT+TGG | + | chr6_1:4148907-4148926 | Msa0869860:intron | 15.0% |
| !!! | AAATCCAATCTATAATATTT+TGG | - | chr6_1:4148914-4148933 | None:intergenic | 15.0% |
| !!! | TTTATAAAATTTTACTCTGA+TGG | - | chr6_1:4149354-4149373 | None:intergenic | 15.0% |
| !! | AAAAAATGAAAAGTAACAAT+GGG | - | chr6_1:4151098-4151117 | None:intergenic | 15.0% |
| !! | TAAAAAATGAAAAGTAACAA+TGG | - | chr6_1:4151099-4151118 | None:intergenic | 15.0% |
| !! | TAATATGAATTTAGAAATTC+TGG | + | chr6_1:4151505-4151524 | Msa0869860:intron | 15.0% |
| !!! | AATTTTTATCTCTTCAATTT+TGG | + | chr6_1:4151635-4151654 | Msa0869860:intron | 15.0% |
| !!! | TATTTCAGTTGATATAATTT+AGG | + | chr6_1:4151910-4151929 | Msa0869860:intron | 15.0% |
| !! | GTATATGAAAATATAATTTG+AGG | - | chr6_1:4151978-4151997 | None:intergenic | 15.0% |
| !! | AAAGTAGAAAATATTGAATT+GGG | + | chr6_1:4152120-4152139 | Msa0869860:intron | 15.0% |
| !!! | ATGTTTTTATTTTTGCAAAT+AGG | + | chr6_1:4152235-4152254 | Msa0869860:intron | 15.0% |
| !!! | TTCCTTTTGATAAAAATTTA+TGG | + | chr6_1:4152687-4152706 | Msa0869860:three_prime_UTR | 15.0% |
| !!! | TACCATAAATTTTTATCAAA+AGG | - | chr6_1:4152692-4152711 | None:intergenic | 15.0% |
| !! | ATAAAAATTTATGGTACTTA+TGG | + | chr6_1:4152696-4152715 | Msa0869860:three_prime_UTR | 15.0% |
| !! | AAATATATATAATGATGCAG+TGG | + | chr6_1:4144867-4144886 | Msa0869860:intron | 20.0% |
| !! | TTGTTTGATTATAACTATTC+AGG | - | chr6_1:4144907-4144926 | None:intergenic | 20.0% |
| !!! | CTTTTATTATGCTATGATAT+TGG | + | chr6_1:4145207-4145226 | Msa0869860:intron | 20.0% |
| !! | TATCTTCTTCAAAGAAATTA+TGG | + | chr6_1:4145316-4145335 | Msa0869860:intron | 20.0% |
| !! | ATCTTCTTCAAAGAAATTAT+GGG | + | chr6_1:4145317-4145336 | Msa0869860:intron | 20.0% |
| !! | AAATTATGGGACATATAAAT+TGG | + | chr6_1:4145330-4145349 | Msa0869860:intron | 20.0% |
| !!! | TAATATTTAAAACCCGATTT+AGG | + | chr6_1:4145469-4145488 | Msa0869860:intron | 20.0% |
| !! | TTAAATCAAAAACCTAAATC+GGG | - | chr6_1:4145484-4145503 | None:intergenic | 20.0% |
| !! | GTTAAATCAAAAACCTAAAT+CGG | - | chr6_1:4145485-4145504 | None:intergenic | 20.0% |
| !!! | TTAACTTGTTTTATCAATGT+TGG | - | chr6_1:4145596-4145615 | None:intergenic | 20.0% |
| !!! | CAATGGTGTTAATTTTTTTT+AGG | + | chr6_1:4145627-4145646 | Msa0869860:intron | 20.0% |
| !! | AAATGTTAAACAGTATTCTT+AGG | - | chr6_1:4145860-4145879 | None:intergenic | 20.0% |
| !! | AATTAGAAACTTGGAAAAAA+GGG | - | chr6_1:4146377-4146396 | None:intergenic | 20.0% |
| !! | AAATTAGAAACTTGGAAAAA+AGG | - | chr6_1:4146378-4146397 | None:intergenic | 20.0% |
| !!! | TAGAATCAATTTTACATGTT+TGG | + | chr6_1:4146936-4146955 | Msa0869860:intron | 20.0% |
| !!! | TTAGCATTCAAATTACTTTT+CGG | + | chr6_1:4147103-4147122 | Msa0869860:intron | 20.0% |
| !!! | TAAGTTAGTTAGATTTTGTT+GGG | + | chr6_1:4147178-4147197 | Msa0869860:intron | 20.0% |
| !!! | TAGGTATGTTTTAATTAGTA+TGG | + | chr6_1:4147429-4147448 | Msa0869860:intron | 20.0% |
| !!! | AGGTATGTTTTAATTAGTAT+GGG | + | chr6_1:4147430-4147449 | Msa0869860:intron | 20.0% |
| !!! | CTTATTTGCTTGTTTTATTT+TGG | + | chr6_1:4147510-4147529 | Msa0869860:intron | 20.0% |
| !!! | GATGATGTTAAAACATTTTA+TGG | + | chr6_1:4148031-4148050 | Msa0869860:CDS | 20.0% |
| !!! | TAAGCTATTTTTGTAAAATG+AGG | + | chr6_1:4148521-4148540 | Msa0869860:intron | 20.0% |
| !!! | AAGCTATTTTTGTAAAATGA+GGG | + | chr6_1:4148522-4148541 | Msa0869860:intron | 20.0% |
| !!! | AGCAATTATGTTTTTAATAG+AGG | + | chr6_1:4148976-4148995 | Msa0869860:intron | 20.0% |
| !!! | TTAGAGCTTGATTTTTATTT+TGG | + | chr6_1:4149068-4149087 | Msa0869860:intron | 20.0% |
| !! | TTCAATATCTAGAAAAACAA+AGG | - | chr6_1:4149860-4149879 | None:intergenic | 20.0% |
| !!! | ATGTATTTTTCCTCATAATT+TGG | - | chr6_1:4149993-4150012 | None:intergenic | 20.0% |
| !!! | TTGTGTTTTTTGATTTGAAA+TGG | - | chr6_1:4150074-4150093 | None:intergenic | 20.0% |
| !! | CATAAAATCAAATGTCTATT+GGG | - | chr6_1:4150226-4150245 | None:intergenic | 20.0% |
| !! | TCATAAAATCAAATGTCTAT+TGG | - | chr6_1:4150227-4150246 | None:intergenic | 20.0% |
| !!! | TGATTTTATGATACTATAGT+TGG | + | chr6_1:4150236-4150255 | Msa0869860:intron | 20.0% |
| !! | GAAAATTCCAAGTAATTATA+TGG | + | chr6_1:4150967-4150986 | Msa0869860:intron | 20.0% |
| !! | TTAACAATATCTAACCAATT+AGG | - | chr6_1:4151068-4151087 | None:intergenic | 20.0% |
| !! | TACAAAAAAAAAAAATACCC+TGG | - | chr6_1:4151275-4151294 | None:intergenic | 20.0% |
| !! | AATTAGGAGTTTAATGTTAT+TGG | - | chr6_1:4151587-4151606 | None:intergenic | 20.0% |
| !! | ATGAATATTTACATTCAGTT+CGG | + | chr6_1:4151609-4151628 | Msa0869860:intron | 20.0% |
| !! | AACATTAATTGAAACCTATA+TGG | - | chr6_1:4151795-4151814 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATTTGTGCAATT+TGG | - | chr6_1:4152016-4152035 | None:intergenic | 20.0% |
| !! | CAAAGTAGAAAATATTGAAT+TGG | + | chr6_1:4152119-4152138 | Msa0869860:intron | 20.0% |
| !! | ATGCAAACAATATTAATTAG+AGG | + | chr6_1:4152147-4152166 | Msa0869860:intron | 20.0% |
| !! | TGCAAACAATATTAATTAGA+GGG | + | chr6_1:4152148-4152167 | Msa0869860:intron | 20.0% |
| !!! | TTATGTTTAACTTTTGTAGA+TGG | + | chr6_1:4152317-4152336 | Msa0869860:intron | 20.0% |
| !!! | AATTTAATTTCCTAATCACA+TGG | - | chr6_1:4152562-4152581 | None:intergenic | 20.0% |
| !! | ATATACACTAAAAAAGGATT+AGG | + | chr6_1:4152722-4152741 | Msa0869860:three_prime_UTR | 20.0% |
| !!! | AAAATTTAAAATTTGGAGAG+GGG | - | chr6_1:4152842-4152861 | None:intergenic | 20.0% |
| !!! | CAAAATTTAAAATTTGGAGA+GGG | - | chr6_1:4152843-4152862 | None:intergenic | 20.0% |
| !!! | AATCATTTGGATTTAAAATC+CGG | - | chr6_1:4152878-4152897 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTTTTTAAATGGC+GGG | - | chr6_1:4152909-4152928 | None:intergenic | 20.0% |
| !!! | GATTTTTTCTTTTTAAATGG+CGG | - | chr6_1:4152910-4152929 | None:intergenic | 20.0% |
| !! | AACAAATGGAATGATTTTCT+AGG | + | chr6_1:4144922-4144941 | Msa0869860:intron | 25.0% |
| !! | ACAAATGGAATGATTTTCTA+GGG | + | chr6_1:4144923-4144942 | Msa0869860:intron | 25.0% |
| !! | NNNNNNATGGTACAAGTTGA+TGG | + | chr6_1:4145041-4145060 | Msa0869860:intron | 25.0% |
| ! | ACTCATAGTTACTTGTTTAA+AGG | + | chr6_1:4145403-4145422 | Msa0869860:intron | 25.0% |
| ! | CTCATAGTTACTTGTTTAAA+GGG | + | chr6_1:4145404-4145423 | Msa0869860:intron | 25.0% |
| ! | TTATTTGTTCACAGACAAAT+TGG | - | chr6_1:4145452-4145471 | None:intergenic | 25.0% |
| ! | AAAACAAGTTAAATCTCTTG+AGG | + | chr6_1:4145604-4145623 | Msa0869860:intron | 25.0% |
| ! | TAAACAGTATTCTTAGGTTA+GGG | - | chr6_1:4145854-4145873 | None:intergenic | 25.0% |
| ! | TTAAACAGTATTCTTAGGTT+AGG | - | chr6_1:4145855-4145874 | None:intergenic | 25.0% |
| ! | ATTATTATACACTTCAAACC+CGG | + | chr6_1:4146071-4146090 | Msa0869860:intron | 25.0% |
| !! | GTTCATACATACTTTCATTT+TGG | + | chr6_1:4146184-4146203 | Msa0869860:intron | 25.0% |
| ! | TGAAATTCTGCAAGTTTATT+CGG | - | chr6_1:4146293-4146312 | None:intergenic | 25.0% |
| ! | ATTAGAAACTTGGAAAAAAG+GGG | - | chr6_1:4146376-4146395 | None:intergenic | 25.0% |
| ! | AATGTTGTAGAAATTGATAG+TGG | + | chr6_1:4146407-4146426 | Msa0869860:intron | 25.0% |
| ! | AAGTGTGAAATGTTAATGTT+TGG | + | chr6_1:4146453-4146472 | Msa0869860:intron | 25.0% |
| ! | AGAAATGATTATGACATGTT+TGG | - | chr6_1:4146709-4146728 | None:intergenic | 25.0% |
| !!! | TGTTTGTTTTTGATTTTGGA+GGG | + | chr6_1:4146892-4146911 | Msa0869860:intron | 25.0% |
| !! | AAGCTAGAATTTGTAGTTTT+TGG | + | chr6_1:4147006-4147025 | Msa0869860:intron | 25.0% |
| !!! | TAGTTTTTGGTTTCTACAAT+TGG | + | chr6_1:4147019-4147038 | Msa0869860:intron | 25.0% |
| ! | TAACTAACTTAGTGTATGTT+TGG | - | chr6_1:4147169-4147188 | None:intergenic | 25.0% |
| !! | CTAAGTTAGTTAGATTTTGT+TGG | + | chr6_1:4147177-4147196 | Msa0869860:intron | 25.0% |
| ! | CAAGCTTATTTCATCAAATA+TGG | - | chr6_1:4147662-4147681 | None:intergenic | 25.0% |
| !! | GATAACTCTAATGATAATGA+AGG | + | chr6_1:4147869-4147888 | Msa0869860:CDS | 25.0% |
| !! | GATAACTCTAATGATAATGA+AGG | + | chr6_1:4147869-4147888 | Msa0869860:CDS | 25.0% |
| ! | AAGATTAGAACATCAAGAAA+AGG | + | chr6_1:4148085-4148104 | Msa0869860:CDS | 25.0% |
| !!! | GACAATTTTTTTCCTTAGAT+GGG | - | chr6_1:4148192-4148211 | None:intergenic | 25.0% |
| !! | TTCCAACTTAATGCAAATTT+TGG | - | chr6_1:4148218-4148237 | None:intergenic | 25.0% |
| !! | TATTCTGCTCATTACAATTT+TGG | + | chr6_1:4148649-4148668 | Msa0869860:intron | 25.0% |
| !! | TTTTAATAGAGGTTGTTCAT+TGG | + | chr6_1:4148987-4149006 | Msa0869860:intron | 25.0% |
| ! | AATCACGCTATTAAAGAAAT+GGG | - | chr6_1:4149037-4149056 | None:intergenic | 25.0% |
| ! | AAATCACGCTATTAAAGAAA+TGG | - | chr6_1:4149038-4149057 | None:intergenic | 25.0% |
| !!! | TGTGTGACTCATATTTTTAA+TGG | + | chr6_1:4149227-4149246 | Msa0869860:intron | 25.0% |
| !!! | TGACTCATATTTTTAATGGA+AGG | + | chr6_1:4149231-4149250 | Msa0869860:intron | 25.0% |
| ! | TGCTATTAGAAATAGTTAAC+TGG | - | chr6_1:4149414-4149433 | None:intergenic | 25.0% |
| !!! | TCCAAAAACTTTTTTGTTTC+TGG | - | chr6_1:4149459-4149478 | None:intergenic | 25.0% |
| ! | ATTTATGGATTCTTGGATAA+GGG | - | chr6_1:4149490-4149509 | None:intergenic | 25.0% |
| ! | TATTTATGGATTCTTGGATA+AGG | - | chr6_1:4149491-4149510 | None:intergenic | 25.0% |
| ! | TATCCAAGAATCCATAAATA+AGG | + | chr6_1:4149491-4149510 | Msa0869860:intron | 25.0% |
| !! | AAGCTTTTATGAAGTAAAGA+TGG | + | chr6_1:4149922-4149941 | Msa0869860:intron | 25.0% |
| !! | TTCTGATTTGAATTTCAGAA+GGG | - | chr6_1:4150156-4150175 | None:intergenic | 25.0% |
| !! | TTTTATGATACTATAGTTGG+TGG | + | chr6_1:4150239-4150258 | Msa0869860:intron | 25.0% |
| ! | TGTAATATTCTGTGAACAAT+TGG | - | chr6_1:4150938-4150957 | None:intergenic | 25.0% |
| ! | ATTGTTCACAGAATATTACA+CGG | + | chr6_1:4150938-4150957 | Msa0869860:intron | 25.0% |
| ! | GTAGAAACCATATAATTACT+TGG | - | chr6_1:4150977-4150996 | None:intergenic | 25.0% |
| !!! | AACCTTTCTTTTTTTGGAAA+GGG | - | chr6_1:4151017-4151036 | None:intergenic | 25.0% |
| !!! | AAACCTTTCTTTTTTTGGAA+AGG | - | chr6_1:4151018-4151037 | None:intergenic | 25.0% |
| !!! | CAAAGAAACCTTTCTTTTTT+TGG | - | chr6_1:4151023-4151042 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAAAGGTTTCTT+TGG | + | chr6_1:4151021-4151040 | Msa0869860:intron | 25.0% |
| ! | TAGTTCATATTCATCCTAAT+TGG | + | chr6_1:4151051-4151070 | Msa0869860:intron | 25.0% |
| ! | CAAATACCGATATATGTTAT+TGG | + | chr6_1:4151135-4151154 | Msa0869860:intron | 25.0% |
| ! | GCAAAACCAATAACATATAT+CGG | - | chr6_1:4151144-4151163 | None:intergenic | 25.0% |
| ! | TTTAAAGAAATTATGTGCTG+AGG | + | chr6_1:4151201-4151220 | Msa0869860:CDS | 25.0% |
| !!! | AATGACTTTTTTTTGTAGAC+AGG | - | chr6_1:4151453-4151472 | None:intergenic | 25.0% |
| ! | GATTTAGTTATTCAAGCATT+TGG | - | chr6_1:4151480-4151499 | None:intergenic | 25.0% |
| !! | TTCTTTGATTTCCCAATTAA+CGG | + | chr6_1:4151818-4151837 | Msa0869860:intron | 25.0% |
| ! | AATACACCAATACATGATAA+GGG | - | chr6_1:4152081-4152100 | None:intergenic | 25.0% |
| !! | TATTAATTAGAGGGTACAAT+AGG | + | chr6_1:4152157-4152176 | Msa0869860:intron | 25.0% |
| !!! | TAGTTGTCAATAGTTTGTTA+CGG | - | chr6_1:4152394-4152413 | None:intergenic | 25.0% |
| ! | ATCAAAAGGAAGTTTCATTT+GGG | - | chr6_1:4152678-4152697 | None:intergenic | 25.0% |
| ! | TATCAAAAGGAAGTTTCATT+TGG | - | chr6_1:4152679-4152698 | None:intergenic | 25.0% |
| !! | ATTTTCTGAATTTTCTACTG+TGG | + | chr6_1:4152752-4152771 | Msa0869860:three_prime_UTR | 25.0% |
| !! | CCAAAATTTAAAATTTGGAG+AGG | - | chr6_1:4152844-4152863 | None:intergenic | 25.0% |
| !! | CCTCTCCAAATTTTAAATTT+TGG | + | chr6_1:4152841-4152860 | Msa0869860:three_prime_UTR | 25.0% |
| !! | CACGTCCAAAATTTAAAATT+TGG | - | chr6_1:4152849-4152868 | None:intergenic | 25.0% |
| ! | TACTTAATTTAGCCTATGTT+TGG | + | chr6_1:4152940-4152959 | Msa0869860:intron | 25.0% |
| ! | AGATATGTTTTCTCTTCTCT+TGG | - | chr6_1:4144823-4144842 | None:intergenic | 30.0% |
| ! | ATTGGTTCATACACAAGAAT+CGG | + | chr6_1:4145373-4145392 | Msa0869860:intron | 30.0% |
| GGATTTGAACACAAAACATA+TGG | - | chr6_1:4145575-4145594 | None:intergenic | 30.0% | |
| GTTACGTCTATAGTTATAAG+TGG | - | chr6_1:4145675-4145694 | None:intergenic | 30.0% | |
| !!! | TGAAGAGTACTGTTTTAGTT+TGG | - | chr6_1:4145884-4145903 | None:intergenic | 30.0% |
| GCATAATGAAAAACGTTAGT+TGG | - | chr6_1:4146113-4146132 | None:intergenic | 30.0% | |
| GTATGAACAACAAGTCAATA+CGG | - | chr6_1:4146172-4146191 | None:intergenic | 30.0% | |
| AAACTTGCAGAATTTCATTC+TGG | + | chr6_1:4146296-4146315 | Msa0869860:intron | 30.0% | |
| GAATTTCATTCTGGTGAAAA+AGG | + | chr6_1:4146305-4146324 | Msa0869860:intron | 30.0% | |
| !! | TCATACTTTTTGCTCTGATT+AGG | + | chr6_1:4146335-4146354 | Msa0869860:intron | 30.0% |
| !! | CATACTTTTTGCTCTGATTA+GGG | + | chr6_1:4146336-4146355 | Msa0869860:intron | 30.0% |
| TTAGAAACTTGGAAAAAAGG+GGG | - | chr6_1:4146375-4146394 | None:intergenic | 30.0% | |
| TAATCCCTTGAAACAAAGAA+AGG | - | chr6_1:4146433-4146452 | None:intergenic | 30.0% | |
| ! | GAAATGTTAATGTTTGGTTC+TGG | + | chr6_1:4146459-4146478 | Msa0869860:intron | 30.0% |
| TACAGTTCCATAATCAATTC+TGG | + | chr6_1:4146728-4146747 | Msa0869860:intron | 30.0% | |
| GATATCGACACATAATCTAT+TGG | - | chr6_1:4146858-4146877 | None:intergenic | 30.0% | |
| !!! | GGTGTGTTTGTTTTTGATTT+TGG | + | chr6_1:4146888-4146907 | Msa0869860:intron | 30.0% |
| !!! | GTGTTTGTTTTTGATTTTGG+AGG | + | chr6_1:4146891-4146910 | Msa0869860:intron | 30.0% |
| !!! | GTTTGTTTTTGATTTTGGAG+GGG | + | chr6_1:4146893-4146912 | Msa0869860:intron | 30.0% |
| TTTATCTTGCCAAGTTATGT+AGG | + | chr6_1:4147220-4147239 | Msa0869860:intron | 30.0% | |
| !!! | TGTTTTAATTAGTATGGGTC+TGG | + | chr6_1:4147435-4147454 | Msa0869860:intron | 30.0% |
| ! | GGTCTGATGTATTTTGTATT+GGG | + | chr6_1:4147568-4147587 | Msa0869860:intron | 30.0% |
| AATAAGTTCTGTTGCAAACA+TGG | - | chr6_1:4147692-4147711 | None:intergenic | 30.0% | |
| !!! | TGACTTATTTTGTGCAGTTT+TGG | + | chr6_1:4147723-4147742 | Msa0869860:intron | 30.0% |
| !!! | GACTTATTTTGTGCAGTTTT+GGG | + | chr6_1:4147724-4147743 | Msa0869860:intron | 30.0% |
| CATGGATAGTTCAAAGAATT+TGG | + | chr6_1:4147775-4147794 | Msa0869860:CDS | 30.0% | |
| TCAAAGAATTTGGTAGATTG+TGG | + | chr6_1:4147785-4147804 | Msa0869860:CDS | 30.0% | |
| ! | GATAACTCGAATGATAATGA+AGG | + | chr6_1:4147836-4147855 | Msa0869860:CDS | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+AGG | + | chr6_1:4148059-4148078 | Msa0869860:intron | 30.0% |
| ACATCAAGAAAAGGAGATAA+TGG | + | chr6_1:4148094-4148113 | Msa0869860:CDS | 30.0% | |
| !!! | GGACAATTTTTTTCCTTAGA+TGG | - | chr6_1:4148193-4148212 | None:intergenic | 30.0% |
| !! | AACTTAATGCAAATTTTGGC+TGG | - | chr6_1:4148214-4148233 | None:intergenic | 30.0% |
| AGCCAAAATTTGCATTAAGT+TGG | + | chr6_1:4148213-4148232 | Msa0869860:CDS | 30.0% | |
| TGTGGGAAATTATGTTTACA+AGG | + | chr6_1:4148456-4148475 | Msa0869860:CDS | 30.0% | |
| GCTTAAACAATGTAACTCTA+AGG | - | chr6_1:4149114-4149133 | None:intergenic | 30.0% | |
| TTGTTTAAGCTTATCCAAAC+CGG | + | chr6_1:4149124-4149143 | Msa0869860:intron | 30.0% | |
| TCACTATTCACTAACAAAAC+CGG | - | chr6_1:4149146-4149165 | None:intergenic | 30.0% | |
| GTGAATTCACCTTTAATCTA+AGG | + | chr6_1:4149162-4149181 | Msa0869860:intron | 30.0% | |
| !!! | TTCTGCTTTTTAAGACATCT+AGG | - | chr6_1:4149265-4149284 | None:intergenic | 30.0% |
| ! | AGGTGCACTCTTTAAAAATA+TGG | - | chr6_1:4149296-4149315 | None:intergenic | 30.0% |
| !! | ATATTTTTAAAGAGTGCACC+TGG | + | chr6_1:4149295-4149314 | Msa0869860:intron | 30.0% |
| !! | TATTTTTAAAGAGTGCACCT+GGG | + | chr6_1:4149296-4149315 | Msa0869860:intron | 30.0% |
| TAGCAATCATAGACATCATT+TGG | + | chr6_1:4149429-4149448 | Msa0869860:intron | 30.0% | |
| ! | GCCAGAAACAAAAAAGTTTT+TGG | + | chr6_1:4149455-4149474 | Msa0869860:intron | 30.0% |
| TGTAAATTACTCAAAAGCTC+AGG | + | chr6_1:4149527-4149546 | Msa0869860:intron | 30.0% | |
| GAAGCAAAGAAACTATAACA+AGG | + | chr6_1:4149616-4149635 | Msa0869860:intron | 30.0% | |
| TATAACAAGGAAAGACAATG+AGG | + | chr6_1:4149629-4149648 | Msa0869860:intron | 30.0% | |
| ! | TGATTTCCCTTCAAAGTTTT+TGG | + | chr6_1:4149700-4149719 | Msa0869860:intron | 30.0% |
| !! | AAAAAGCTCTGAGAAAGAAT+TGG | + | chr6_1:4149834-4149853 | Msa0869860:intron | 30.0% |
| CTTTCAAATTGGAGAGTTTA+CGG | + | chr6_1:4149887-4149906 | Msa0869860:intron | 30.0% | |
| ! | TCTGATTTGAATTTCAGAAG+GGG | - | chr6_1:4150155-4150174 | None:intergenic | 30.0% |
| ! | CTTCTGATTTGAATTTCAGA+AGG | - | chr6_1:4150157-4150176 | None:intergenic | 30.0% |
| ATGCAGCAATTCAATTCAAT+TGG | + | chr6_1:4150604-4150623 | Msa0869860:intron | 30.0% | |
| TGCAGCAATTCAATTCAATT+GGG | + | chr6_1:4150605-4150624 | Msa0869860:intron | 30.0% | |
| TTTAAGTATGTTACTGCCAA+AGG | + | chr6_1:4150775-4150794 | Msa0869860:CDS | 30.0% | |
| !!! | ACCTTTCTTTTTTTGGAAAG+GGG | - | chr6_1:4151016-4151035 | None:intergenic | 30.0% |
| TTTCAATCATCCAATGCATT+TGG | + | chr6_1:4151338-4151357 | Msa0869860:intron | 30.0% | |
| AAAGCAATATCCAAATGCAT+TGG | - | chr6_1:4151351-4151370 | None:intergenic | 30.0% | |
| GGAGTTGAAAACAATTACAT+TGG | + | chr6_1:4151373-4151392 | Msa0869860:intron | 30.0% | |
| TGATCTTGAACAATAAAGCT+AGG | - | chr6_1:4151558-4151577 | None:intergenic | 30.0% | |
| ATGTTTAAGGAACGTAACTA+TGG | + | chr6_1:4151703-4151722 | Msa0869860:intron | 30.0% | |
| !!! | GAACTGAGAAAAGTTTTTTG+AGG | - | chr6_1:4151773-4151792 | None:intergenic | 30.0% |
| ! | AACTTTTCTCAGTTCCATAT+AGG | + | chr6_1:4151778-4151797 | Msa0869860:intron | 30.0% |
| ! | TCTTTGATTTCCCAATTAAC+GGG | + | chr6_1:4151819-4151838 | Msa0869860:intron | 30.0% |
| !! | TTGAAACCAAGAAGTATCTT+TGG | + | chr6_1:4151871-4151890 | Msa0869860:intron | 30.0% |
| ! | TAATTTGTGCAATTTGGTCT+GGG | - | chr6_1:4152010-4152029 | None:intergenic | 30.0% |
| !! | TTAATTTGTGCAATTTGGTC+TGG | - | chr6_1:4152011-4152030 | None:intergenic | 30.0% |
| ! | AAAGTACCCTTATCATGTAT+TGG | + | chr6_1:4152072-4152091 | Msa0869860:intron | 30.0% |
| GAATACACCAATACATGATA+AGG | - | chr6_1:4152082-4152101 | None:intergenic | 30.0% | |
| TTAATTTCCTAATCACATGG+CGG | - | chr6_1:4152559-4152578 | None:intergenic | 30.0% | |
| GTCATGACATTAAACACATT+TGG | - | chr6_1:4152654-4152673 | None:intergenic | 30.0% | |
| TCAAAAGGAAGTTTCATTTG+GGG | - | chr6_1:4152677-4152696 | None:intergenic | 30.0% | |
| TGGAGCATATACACTAAAAA+AGG | + | chr6_1:4152716-4152735 | Msa0869860:three_prime_UTR | 30.0% | |
| ! | AATTTTGGACGTGTTTTATC+CGG | + | chr6_1:4152856-4152875 | Msa0869860:three_prime_UTR | 30.0% |
| CATAGGCTAAATTAAGTATG+TGG | - | chr6_1:4152938-4152957 | None:intergenic | 30.0% | |
| TAATTTAGCCTATGTTTGGT+TGG | + | chr6_1:4152944-4152963 | Msa0869860:three_prime_UTR | 30.0% | |
| TGTATCAATGCATTGGATGA+TGG | + | chr6_1:4144784-4144803 | Msa0869860:intron | 35.0% | |
| GTATCAATGCATTGGATGAT+GGG | + | chr6_1:4144785-4144804 | Msa0869860:intron | 35.0% | |
| !!! | TTTTTTATAGACCACATGCG+AGG | - | chr6_1:4145073-4145092 | None:intergenic | 35.0% |
| TCTTTCCTTCTCAATTGCAT+TGG | + | chr6_1:4145355-4145374 | Msa0869860:intron | 35.0% | |
| ATGAACCAATGCAATTGAGA+AGG | - | chr6_1:4145363-4145382 | None:intergenic | 35.0% | |
| !! | TCAAGAGCATTTGAATGTGA+TGG | + | chr6_1:4145527-4145546 | Msa0869860:intron | 35.0% |
| AGTTAAATCTCTTGAGGCAA+TGG | + | chr6_1:4145610-4145629 | Msa0869860:intron | 35.0% | |
| AAACGAGTCATGTTATCAAG+TGG | + | chr6_1:4145763-4145782 | Msa0869860:intron | 35.0% | |
| GAAAAACGTTAGTTGGACAA+TGG | - | chr6_1:4146106-4146125 | None:intergenic | 35.0% | |
| GCTTGAAGTAGAATCAATTC+TGG | + | chr6_1:4146655-4146674 | Msa0869860:intron | 35.0% | |
| AGAGGAACCAGAATTGATTA+TGG | - | chr6_1:4146738-4146757 | None:intergenic | 35.0% | |
| !! | AATTCTGGTTCCTCTAAAAG+TGG | + | chr6_1:4146743-4146762 | Msa0869860:intron | 35.0% |
| !! | ATGTTCAGTTCCACTTTTAG+AGG | - | chr6_1:4146756-4146775 | None:intergenic | 35.0% |
| !! | TGTGTCGATATCATTTTGCA+AGG | + | chr6_1:4146866-4146885 | Msa0869860:intron | 35.0% |
| !! | GTGTCGATATCATTTTGCAA+GGG | + | chr6_1:4146867-4146886 | Msa0869860:intron | 35.0% |
| AGGGGTCAAAATGATTCTAA+AGG | + | chr6_1:4146911-4146930 | Msa0869860:intron | 35.0% | |
| !!! | TCTACAATTGGTTTTAGCCT+TGG | + | chr6_1:4147031-4147050 | Msa0869860:intron | 35.0% |
| AAGGTTGAACGATAAATCCA+AGG | - | chr6_1:4147051-4147070 | None:intergenic | 35.0% | |
| ! | AGATTTTGTTGGGAAAGTCA+AGG | + | chr6_1:4147188-4147207 | Msa0869860:intron | 35.0% |
| TAACTTGGCAAGATAAACCA+AGG | - | chr6_1:4147217-4147236 | None:intergenic | 35.0% | |
| AAAGCAACTCCTACATAACT+TGG | - | chr6_1:4147232-4147251 | None:intergenic | 35.0% | |
| TCACATGTATTAGTGTCGTA+TGG | + | chr6_1:4147353-4147372 | Msa0869860:intron | 35.0% | |
| GGTGCAACAAAGTTAATGAT+AGG | + | chr6_1:4147410-4147429 | Msa0869860:intron | 35.0% | |
| ! | GGGTCTGATGTATTTTGTAT+TGG | + | chr6_1:4147567-4147586 | Msa0869860:intron | 35.0% |
| !!! | TATTTTGTGCAGTTTTGGGT+TGG | + | chr6_1:4147728-4147747 | Msa0869860:intron | 35.0% |
| ATCCATGAAGTTCCAATTGA+GGG | - | chr6_1:4147762-4147781 | None:intergenic | 35.0% | |
| TATCCATGAAGTTCCAATTG+AGG | - | chr6_1:4147763-4147782 | None:intergenic | 35.0% | |
| TGTGGTACTATTCATGATGA+AGG | + | chr6_1:4147803-4147822 | Msa0869860:intron | 35.0% | |
| !! | TGGAGAGTATGCTTTGAAAA+AGG | + | chr6_1:4148051-4148070 | Msa0869860:intron | 35.0% |
| !! | GGAGAGTATGCTTTGAAAAA+GGG | + | chr6_1:4148052-4148071 | Msa0869860:intron | 35.0% |
| !!! | CTTTGAAAAAGGGTTTTAGG+TGG | + | chr6_1:4148062-4148081 | Msa0869860:intron | 35.0% |
| GTTAAAAACTCTCCCATCTA+AGG | + | chr6_1:4148177-4148196 | Msa0869860:CDS | 35.0% | |
| CAACCTCTTGTTAAAGATGT+AGG | + | chr6_1:4148400-4148419 | Msa0869860:CDS | 35.0% | |
| ! | TCTGCTCATTACAATTTTGG+TGG | + | chr6_1:4148652-4148671 | Msa0869860:intron | 35.0% |
| AGACAACAACACAAGAATGA+CGG | + | chr6_1:4148692-4148711 | Msa0869860:intron | 35.0% | |
| GAAGCGAATAAGTGAAAGAA+TGG | + | chr6_1:4148731-4148750 | Msa0869860:CDS | 35.0% | |
| AGTTAAACCAACGAAACAAC+AGG | + | chr6_1:4148866-4148885 | Msa0869860:CDS | 35.0% | |
| ACGCTATTAAAGAAATGGGT+GGG | - | chr6_1:4149033-4149052 | None:intergenic | 35.0% | |
| ATTCACTAACAAAACCGGTT+TGG | - | chr6_1:4149141-4149160 | None:intergenic | 35.0% | |
| ! | GCATTGACACCTTAGATTAA+AGG | - | chr6_1:4149174-4149193 | None:intergenic | 35.0% |
| GTGTCAATGCTACATACATT+GGG | + | chr6_1:4149184-4149203 | Msa0869860:intron | 35.0% | |
| TACATACATTGGGACTTACA+TGG | + | chr6_1:4149194-4149213 | Msa0869860:intron | 35.0% | |
| AAATATGAGTCACACATCTG+AGG | - | chr6_1:4149223-4149242 | None:intergenic | 35.0% | |
| TCTGCTTCCATTTGATCAAT+CGG | - | chr6_1:4149391-4149410 | None:intergenic | 35.0% | |
| !! | GAGCCTTATTTATGGATTCT+TGG | - | chr6_1:4149497-4149516 | None:intergenic | 35.0% |
| AGAATCCATAAATAAGGCTC+TGG | + | chr6_1:4149497-4149516 | Msa0869860:intron | 35.0% | |
| !! | ATGATCCAGAGCCTTATTTA+TGG | - | chr6_1:4149505-4149524 | None:intergenic | 35.0% |
| TACTCAAAAGCTCAGGAAAA+TGG | + | chr6_1:4149534-4149553 | Msa0869860:intron | 35.0% | |
| GCACTGAAGGTTGTAATAAA+AGG | - | chr6_1:4149664-4149683 | None:intergenic | 35.0% | |
| TAGAACATCACAAGCTGATT+TGG | + | chr6_1:4149803-4149822 | Msa0869860:intron | 35.0% | |
| TGAAGTTGTGCCTTTCAAAT+TGG | + | chr6_1:4149876-4149895 | Msa0869860:intron | 35.0% | |
| CGTAAACTCTCCAATTTGAA+AGG | - | chr6_1:4149889-4149908 | None:intergenic | 35.0% | |
| ! | GAAGTAAAGATGGTTTGTGA+TGG | + | chr6_1:4149932-4149951 | Msa0869860:intron | 35.0% |
| ! | GATTTGAAATGGTGTGTTTG+TGG | - | chr6_1:4150063-4150082 | None:intergenic | 35.0% |
| !! | TTAAGTTGGTAGGTTGGATT+GGG | - | chr6_1:4150105-4150124 | None:intergenic | 35.0% |
| !! | TTGAAGTTAAGTTGGTAGGT+TGG | - | chr6_1:4150111-4150130 | None:intergenic | 35.0% |
| !! | GAGTTTGAAGTTAAGTTGGT+AGG | - | chr6_1:4150115-4150134 | None:intergenic | 35.0% |
| ! | CTAGGAGTTTGAAGTTAAGT+TGG | - | chr6_1:4150119-4150138 | None:intergenic | 35.0% |
| ! | GAAGAACTTTTCATCACAGT+CGG | - | chr6_1:4150191-4150210 | None:intergenic | 35.0% |
| ATGTCTATTGGGACATTTGT+GGG | - | chr6_1:4150215-4150234 | None:intergenic | 35.0% | |
| AATGTCTATTGGGACATTTG+TGG | - | chr6_1:4150216-4150235 | None:intergenic | 35.0% | |
| TGAGGAATTGAGCAATTACA+GGG | - | chr6_1:4150319-4150338 | None:intergenic | 35.0% | |
| TTGAGGAATTGAGCAATTAC+AGG | - | chr6_1:4150320-4150339 | None:intergenic | 35.0% | |
| CTGGTTCAATAGAAACTTTG+AGG | - | chr6_1:4150337-4150356 | None:intergenic | 35.0% | |
| !! | CAAGCATAAACTTTGAAGCA+CGG | - | chr6_1:4150362-4150381 | None:intergenic | 35.0% |
| CTTTCTTGTATCCTTGAGTT+TGG | + | chr6_1:4150474-4150493 | Msa0869860:CDS | 35.0% | |
| GGTGATCTAAACATTAATCG+TGG | + | chr6_1:4150522-4150541 | Msa0869860:CDS | 35.0% | |
| CTACAAAGGAACATAAGAGT+TGG | - | chr6_1:4150659-4150678 | None:intergenic | 35.0% | |
| ! | TATGTTCCTTTGTAGCTCTA+TGG | + | chr6_1:4150664-4150683 | Msa0869860:intron | 35.0% |
| ! | ATGTTCCTTTGTAGCTCTAT+GGG | + | chr6_1:4150665-4150684 | Msa0869860:intron | 35.0% |
| TTGAAACATGCGAGTATGAA+AGG | + | chr6_1:4150751-4150770 | Msa0869860:CDS | 35.0% | |
| !!! | TCTTTTTTTGGAAAGGGGAT+AGG | - | chr6_1:4151011-4151030 | None:intergenic | 35.0% |
| TCCCCTTTCCAAAAAAAGAA+AGG | + | chr6_1:4151012-4151031 | Msa0869860:intron | 35.0% | |
| !!! | ATTGGTTTTGCAACAGATTC+TGG | + | chr6_1:4151153-4151172 | Msa0869860:intron | 35.0% |
| !! | TGTTCGTCTTTGATTTTCCA+GGG | - | chr6_1:4151181-4151200 | None:intergenic | 35.0% |
| !! | ATGTTCGTCTTTGATTTTCC+AGG | - | chr6_1:4151182-4151201 | None:intergenic | 35.0% |
| AAAATACCCTGGAAATGTGT+TGG | - | chr6_1:4151264-4151283 | None:intergenic | 35.0% | |
| GAAATCTGCTCAAATGCTTT+GGG | - | chr6_1:4151322-4151341 | None:intergenic | 35.0% | |
| TGAAATCTGCTCAAATGCTT+TGG | - | chr6_1:4151323-4151342 | None:intergenic | 35.0% | |
| TGCATTTGGATATTGCTTTG+TGG | + | chr6_1:4151352-4151371 | Msa0869860:intron | 35.0% | |
| !! | AGAAATTCTGGTTCAACTCT+TGG | + | chr6_1:4151517-4151536 | Msa0869860:intron | 35.0% |
| CATTGGAATTCCCGTTAATT+GGG | - | chr6_1:4151832-4151851 | None:intergenic | 35.0% | |
| TCATTGGAATTCCCGTTAAT+TGG | - | chr6_1:4151833-4151852 | None:intergenic | 35.0% | |
| ! | ATTCCAATGATTTGCAGCTT+TGG | + | chr6_1:4151843-4151862 | Msa0869860:intron | 35.0% |
| CACAAACCAAAGATACTTCT+TGG | - | chr6_1:4151880-4151899 | None:intergenic | 35.0% | |
| !! | AAGTATCTTTGGTTTGTGTG+TGG | + | chr6_1:4151882-4151901 | Msa0869860:intron | 35.0% |
| ! | TTGAAATGAGTCCGTCATTT+TGG | + | chr6_1:4152208-4152227 | Msa0869860:intron | 35.0% |
| !! | TGAAATGAGTCCGTCATTTT+GGG | + | chr6_1:4152209-4152228 | Msa0869860:intron | 35.0% |
| AAAACATCGTCCCAAAATGA+CGG | - | chr6_1:4152222-4152241 | None:intergenic | 35.0% | |
| ! | TGCAAATAGGTTAGACGTTT+TGG | + | chr6_1:4152248-4152267 | Msa0869860:intron | 35.0% |
| ! | GCAAATAGGTTAGACGTTTT+GGG | + | chr6_1:4152249-4152268 | Msa0869860:intron | 35.0% |
| !! | CAAGAGAGCATATTTTGTAG+CGG | + | chr6_1:4152273-4152292 | Msa0869860:intron | 35.0% |
| !! | TTGTCAATAGTTTGTTACGG+TGG | - | chr6_1:4152391-4152410 | None:intergenic | 35.0% |
| CCTCAATATGCTAAATTGCT+AGG | - | chr6_1:4152447-4152466 | None:intergenic | 35.0% | |
| CCTAGCAATTTAGCATATTG+AGG | + | chr6_1:4152444-4152463 | Msa0869860:three_prime_UTR | 35.0% | |
| TTGTAAGCAACATTTGACCT+TGG | - | chr6_1:4152501-4152520 | None:intergenic | 35.0% | |
| CAAAAGGAAGTTTCATTTGG+GGG | - | chr6_1:4152676-4152695 | None:intergenic | 35.0% | |
| !! | AATGCATTGGATGATGGGTT+GGG | + | chr6_1:4144790-4144809 | Msa0869860:intron | 40.0% |
| ! | TAAGCATAGCTCAGTTGGTA+AGG | + | chr6_1:4146042-4146061 | Msa0869860:intron | 40.0% |
| ! | AGTGGCCTTTCTTTGTTTCA+AGG | + | chr6_1:4146425-4146444 | Msa0869860:intron | 40.0% |
| ! | GTGGCCTTTCTTTGTTTCAA+GGG | + | chr6_1:4146426-4146445 | Msa0869860:intron | 40.0% |
| AACCTTGATGCATGTGATAG+AGG | + | chr6_1:4146831-4146850 | Msa0869860:intron | 40.0% | |
| GTATTAGTGTCGTATGGTGT+TGG | + | chr6_1:4147359-4147378 | Msa0869860:intron | 40.0% | |
| ACACGCCTTCTATAAGATGT+CGG | + | chr6_1:4147389-4147408 | Msa0869860:intron | 40.0% | |
| ! | TTGCACCGACATCTTATAGA+AGG | - | chr6_1:4147397-4147416 | None:intergenic | 40.0% |
| TCTCAATGTTGGTGTGGTAT+TGG | + | chr6_1:4147463-4147482 | Msa0869860:intron | 40.0% | |
| !! | CTAGTGTTAGCTTTGTGTCA+CGG | + | chr6_1:4147546-4147565 | Msa0869860:intron | 40.0% |
| !! | TAGTGTTAGCTTTGTGTCAC+GGG | + | chr6_1:4147547-4147566 | Msa0869860:intron | 40.0% |
| !! | CTATTGATGATGAAGCACGT+TGG | + | chr6_1:4147975-4147994 | Msa0869860:CDS | 40.0% |
| GAAAAACACATCCCTGTTTC+AGG | - | chr6_1:4148004-4148023 | None:intergenic | 40.0% | |
| AATTCTTGCTTGCTCAAGAG+AGG | + | chr6_1:4148132-4148151 | Msa0869860:CDS | 40.0% | |
| ATTCTTGCTTGCTCAAGAGA+GGG | + | chr6_1:4148133-4148152 | Msa0869860:CDS | 40.0% | |
| !! | TGCATTAAGTTGGAAGACGA+TGG | + | chr6_1:4148223-4148242 | Msa0869860:CDS | 40.0% |
| TGAACAATCTTCCCTTTGCA+GGG | - | chr6_1:4148297-4148316 | None:intergenic | 40.0% | |
| TTGAACAATCTTCCCTTTGC+AGG | - | chr6_1:4148298-4148317 | None:intergenic | 40.0% | |
| TGCAAAGGGAAGATTGTTCA+AGG | + | chr6_1:4148297-4148316 | Msa0869860:CDS | 40.0% | |
| ! | ACGCAAGTTCATTTTCCTGT+TGG | - | chr6_1:4148323-4148342 | None:intergenic | 40.0% |
| GCTCCTACATCTTTAACAAG+AGG | - | chr6_1:4148406-4148425 | None:intergenic | 40.0% | |
| ! | ACCATTTTGCAAACGAGATG+TGG | + | chr6_1:4148438-4148457 | Msa0869860:CDS | 40.0% |
| ! | CCATTTTGCAAACGAGATGT+GGG | + | chr6_1:4148439-4148458 | Msa0869860:CDS | 40.0% |
| TACAAGGAACGACATGCAAT+TGG | + | chr6_1:4148472-4148491 | Msa0869860:CDS | 40.0% | |
| CGACATGCAATTGGAAAAGA+AGG | + | chr6_1:4148481-4148500 | Msa0869860:CDS | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr6_1:4148487-4148506 | Msa0869860:intron | 40.0% | |
| AGCTGCTAGAAAAGATAGAG+TGG | + | chr6_1:4148769-4148788 | Msa0869860:CDS | 40.0% | |
| AATCGAATCACAGATGCCTT+TGG | + | chr6_1:4148807-4148826 | Msa0869860:CDS | 40.0% | |
| AACTTGCGATTGAGTACCAT+GGG | - | chr6_1:4148850-4148869 | None:intergenic | 40.0% | |
| ! | TAACTTGCGATTGAGTACCA+TGG | - | chr6_1:4148851-4148870 | None:intergenic | 40.0% |
| !! | TTTCTCACCTGTTGTTTCGT+TGG | - | chr6_1:4148876-4148895 | None:intergenic | 40.0% |
| !! | GGTTGTTCATTGGTTCCAAA+TGG | + | chr6_1:4148997-4149016 | Msa0869860:intron | 40.0% |
| CACGCTATTAAAGAAATGGG+TGG | - | chr6_1:4149034-4149053 | None:intergenic | 40.0% | |
| GGTGTCAATGCTACATACAT+TGG | + | chr6_1:4149183-4149202 | Msa0869860:intron | 40.0% | |
| CTTCCATTTGATCAATCGGA+TGG | - | chr6_1:4149387-4149406 | None:intergenic | 40.0% | |
| !! | GAAGCAAAAACAAGCACTGA+AGG | - | chr6_1:4149677-4149696 | None:intergenic | 40.0% |
| CCAAGGCCAAAAACTTTGAA+GGG | - | chr6_1:4149709-4149728 | None:intergenic | 40.0% | |
| TCCAAGGCCAAAAACTTTGA+AGG | - | chr6_1:4149710-4149729 | None:intergenic | 40.0% | |
| !! | TCTATGCAGTAAAGCGTTGA+TGG | - | chr6_1:4149787-4149806 | None:intergenic | 40.0% |
| ! | AGTGCCTTTTCAATGGTTTG+GGG | - | chr6_1:4149966-4149985 | None:intergenic | 40.0% |
| ! | GAGTGCCTTTTCAATGGTTT+GGG | - | chr6_1:4149967-4149986 | None:intergenic | 40.0% |
| !! | AGAGTGCCTTTTCAATGGTT+TGG | - | chr6_1:4149968-4149987 | None:intergenic | 40.0% |
| GTGTTTGTGGTATTGCGTTT+GGG | - | chr6_1:4150050-4150069 | None:intergenic | 40.0% | |
| TGTGTTTGTGGTATTGCGTT+TGG | - | chr6_1:4150051-4150070 | None:intergenic | 40.0% | |
| !! | GTTAAGTTGGTAGGTTGGAT+TGG | - | chr6_1:4150106-4150125 | None:intergenic | 40.0% |
| ! | AACTTTTCATCACAGTCGGT+AGG | - | chr6_1:4150187-4150206 | None:intergenic | 40.0% |
| GTGGACGATGTGAAAAACAA+GGG | + | chr6_1:4150258-4150277 | Msa0869860:intron | 40.0% | |
| ! | GAAAAACAAGGGCTAGTAGA+TGG | + | chr6_1:4150269-4150288 | Msa0869860:intron | 40.0% |
| CGTGCTTCAAAGTTTATGCT+TGG | + | chr6_1:4150360-4150379 | Msa0869860:intron | 40.0% | |
| TCTTGTATCCTTGAGTTTGG+CGG | + | chr6_1:4150477-4150496 | Msa0869860:CDS | 40.0% | |
| ! | CTTTACTGCTTGCTGAAGAT+GGG | + | chr6_1:4150562-4150581 | Msa0869860:CDS | 40.0% |
| ! | AGTATCGGGCTTTACTCTTA+GGG | + | chr6_1:4150728-4150747 | Msa0869860:CDS | 40.0% |
| !! | CTCGGAACTTGTTATCAATC+AGG | + | chr6_1:4150801-4150820 | Msa0869860:CDS | 40.0% |
| GAAATTATGTGCTGAGGCTT+TGG | + | chr6_1:4151207-4151226 | Msa0869860:CDS | 40.0% | |
| TCAACTCTTGGATAGAAGCT+CGG | + | chr6_1:4151529-4151548 | Msa0869860:intron | 40.0% | |
| GGTCTAACCATTGAGATTGA+TGG | - | chr6_1:4151752-4151771 | None:intergenic | 40.0% | |
| GCATTAATCATCGTCAGAGA+CGG | + | chr6_1:4152361-4152380 | Msa0869860:exon | 40.0% | |
| TTTCACCTTATATGAGCCTC+TGG | - | chr6_1:4152992-4153011 | None:intergenic | 40.0% | |
| ! | TGCAGTGTTGAGATAATGTG+TGG | + | chr6_1:4153024-4153043 | Msa0869860:three_prime_UTR | 40.0% |
| ! | AGTGTTGAGATAATGTGTGG+TGG | + | chr6_1:4153027-4153046 | Msa0869860:three_prime_UTR | 40.0% |
| GTGTTGAGATAATGTGTGGT+GGG | + | chr6_1:4153028-4153047 | Msa0869860:three_prime_UTR | 40.0% | |
| !! | CAATGCATTGGATGATGGGT+TGG | + | chr6_1:4144789-4144808 | Msa0869860:intron | 45.0% |
| CACAGTAAGCATAGCTCAGT+TGG | + | chr6_1:4146037-4146056 | Msa0869860:intron | 45.0% | |
| ACACTTCAAACCCGGCAAAT+TGG | + | chr6_1:4146079-4146098 | Msa0869860:intron | 45.0% | |
| TGGACAATGGTCCAATTTGC+CGG | - | chr6_1:4146093-4146112 | None:intergenic | 45.0% | |
| GTCCTCTATCACATGCATCA+AGG | - | chr6_1:4146836-4146855 | None:intergenic | 45.0% | |
| ! | TGTCGTATGGTGTTGGATAC+TGG | + | chr6_1:4147366-4147385 | Msa0869860:intron | 45.0% |
| GTCTGGTGTAGTCTCAATGT+TGG | + | chr6_1:4147452-4147471 | Msa0869860:intron | 45.0% | |
| GTGTAGTCTCAATGTTGGTG+TGG | + | chr6_1:4147457-4147476 | Msa0869860:intron | 45.0% | |
| ! | GTGTGGTATTGGAATGTTGC+AGG | + | chr6_1:4147474-4147493 | Msa0869860:intron | 45.0% |
| CGTGACACAAAGCTAACACT+AGG | - | chr6_1:4147548-4147567 | None:intergenic | 45.0% | |
| TTGGCACTTTCACCCTCAAT+TGG | + | chr6_1:4147747-4147766 | Msa0869860:CDS | 45.0% | |
| CACCCTCAATTGGAACTTCA+TGG | + | chr6_1:4147757-4147776 | Msa0869860:CDS | 45.0% | |
| AGTTGGAAGACGATGGTTTG+TGG | + | chr6_1:4148230-4148249 | Msa0869860:intron | 45.0% | |
| GAAGATTGTTCAAGGCCAAC+AGG | + | chr6_1:4148305-4148324 | Msa0869860:CDS | 45.0% | |
| !! | ATCCAAAGCACTGATGATCC+AGG | + | chr6_1:4148355-4148374 | Msa0869860:CDS | 45.0% |
| CCCACATCTCGTTTGCAAAA+TGG | - | chr6_1:4148442-4148461 | None:intergenic | 45.0% | |
| ! | TGGAAAAGAAGGTGATGGCA+TGG | + | chr6_1:4148492-4148511 | Msa0869860:intron | 45.0% |
| ! | TTGGTGGTTTCATCTCACCA+CGG | + | chr6_1:4148668-4148687 | Msa0869860:intron | 45.0% |
| !!! | TCTTTTCTAGCAGCTCTGAG+TGG | - | chr6_1:4148764-4148783 | None:intergenic | 45.0% |
| ATGCCTTTGGTACGCTTCAA+GGG | + | chr6_1:4148820-4148839 | Msa0869860:CDS | 45.0% | |
| ATACCCTTGAAGCGTACCAA+AGG | - | chr6_1:4148826-4148845 | None:intergenic | 45.0% | |
| ! | GTGGGACATTTTGCACCATT+TGG | - | chr6_1:4149015-4149034 | None:intergenic | 45.0% |
| TTGGACCTTCTGTGTATGAG+AGG | + | chr6_1:4149087-4149106 | Msa0869860:intron | 45.0% | |
| TGGACCTTCTGTGTATGAGA+GGG | + | chr6_1:4149088-4149107 | Msa0869860:intron | 45.0% | |
| !! | TTTTAAAGAGTGCACCTGGG+CGG | + | chr6_1:4149299-4149318 | Msa0869860:intron | 45.0% |
| TGGCCATCCGATTGATCAAA+TGG | + | chr6_1:4149381-4149400 | Msa0869860:intron | 45.0% | |
| !!! | CCCTTCAAAGTTTTTGGCCT+TGG | + | chr6_1:4149706-4149725 | Msa0869860:intron | 45.0% |
| CCTCTACTCATCATCATCCA+AGG | - | chr6_1:4149726-4149745 | None:intergenic | 45.0% | |
| ! | CCTTGGATGATGATGAGTAG+AGG | + | chr6_1:4149723-4149742 | Msa0869860:intron | 45.0% |
| !! | ACATCACAAGCTGATTTGGC+TGG | + | chr6_1:4149807-4149826 | Msa0869860:intron | 45.0% |
| !! | CATCACAAGCTGATTTGGCT+GGG | + | chr6_1:4149808-4149827 | Msa0869860:intron | 45.0% |
| ATCCCCCCAAACCATTGAAA+AGG | + | chr6_1:4149959-4149978 | Msa0869860:intron | 45.0% | |
| !! | TGCCTTTTCAATGGTTTGGG+GGG | - | chr6_1:4149964-4149983 | None:intergenic | 45.0% |
| !! | GTGCCTTTTCAATGGTTTGG+GGG | - | chr6_1:4149965-4149984 | None:intergenic | 45.0% |
| !! | TGGCTAGAGTGCCTTTTCAA+TGG | - | chr6_1:4149973-4149992 | None:intergenic | 45.0% |
| GGCACTCTAGCCAAATTATG+AGG | + | chr6_1:4149980-4149999 | Msa0869860:intron | 45.0% | |
| !!! | GGTGGCTGAGAATTTTGGTT+TGG | - | chr6_1:4150024-4150043 | None:intergenic | 45.0% |
| ! | TGTGGTATTGCGTTTGGGTT+GGG | - | chr6_1:4150045-4150064 | None:intergenic | 45.0% |
| TTGTGGTATTGCGTTTGGGT+TGG | - | chr6_1:4150046-4150065 | None:intergenic | 45.0% | |
| TTTCATCACAGTCGGTAGGT+TGG | - | chr6_1:4150183-4150202 | None:intergenic | 45.0% | |
| GGTGGACGATGTGAAAAACA+AGG | + | chr6_1:4150257-4150276 | Msa0869860:intron | 45.0% | |
| ! | AAACAAGGGCTAGTAGATGG+TGG | + | chr6_1:4150272-4150291 | Msa0869860:intron | 45.0% |
| !! | TAAACTTTGAAGCACGGTGC+TGG | - | chr6_1:4150356-4150375 | None:intergenic | 45.0% |
| AACATTAATCGTGGACCAGC+AGG | + | chr6_1:4150531-4150550 | Msa0869860:CDS | 45.0% | |
| ! | GCTTTACTGCTTGCTGAAGA+TGG | + | chr6_1:4150561-4150580 | Msa0869860:CDS | 45.0% |
| CGAAACCCATAGAGCTACAA+AGG | - | chr6_1:4150673-4150692 | None:intergenic | 45.0% | |
| !! | ACTCAGCGGACTCTTTTGTT+TGG | - | chr6_1:4150711-4150730 | None:intergenic | 45.0% |
| CAAAAGAGTCCGCTGAGTAT+CGG | + | chr6_1:4150713-4150732 | Msa0869860:CDS | 45.0% | |
| AAAAGAGTCCGCTGAGTATC+GGG | + | chr6_1:4150714-4150733 | Msa0869860:CDS | 45.0% | |
| !! | GAGTATCGGGCTTTACTCTT+AGG | + | chr6_1:4150727-4150746 | Msa0869860:CDS | 45.0% |
| TGTTACTGCCAAAGGAGACT+CGG | + | chr6_1:4150783-4150802 | Msa0869860:CDS | 45.0% | |
| AACAAGTTCCGAGTCTCCTT+TGG | - | chr6_1:4150794-4150813 | None:intergenic | 45.0% | |
| GAGCTGTTCGTAATGCAAAC+CGG | + | chr6_1:4151725-4151744 | Msa0869860:CDS | 45.0% | |
| AGCTGTTCGTAATGCAAACC+GGG | + | chr6_1:4151726-4151745 | Msa0869860:CDS | 45.0% | |
| ! | AACCATTGAGATTGATGGCC+CGG | - | chr6_1:4151747-4151766 | None:intergenic | 45.0% |
| CAGCCAAAGCTGCAAATCAT+TGG | - | chr6_1:4151849-4151868 | None:intergenic | 45.0% | |
| TTGTGCAATTTGGTCTGGGA+CGG | - | chr6_1:4152006-4152025 | None:intergenic | 45.0% | |
| AGTATGACACTGCATGTCCA+AGG | + | chr6_1:4152481-4152500 | Msa0869860:three_prime_UTR | 45.0% | |
| TGGCGGTCATCTATACATCA+TGG | - | chr6_1:4152542-4152561 | None:intergenic | 45.0% | |
| TAGATGACCGCCATGTGATT+AGG | + | chr6_1:4152549-4152568 | Msa0869860:three_prime_UTR | 45.0% | |
| AGCAACGTCCAACCAAACAT+AGG | - | chr6_1:4152955-4152974 | None:intergenic | 45.0% | |
| ! | TTGAGATAATGTGTGGTGGG+TGG | + | chr6_1:4153031-4153050 | Msa0869860:three_prime_UTR | 45.0% |
| !! | TGAGATAATGTGTGGTGGGT+GGG | + | chr6_1:4153032-4153051 | Msa0869860:three_prime_UTR | 45.0% |
| !!! | AAAATTTTATAAATTTGTTT+TGG | + | chr6_1:4149361-4149380 | Msa0869860:intron | 5.0% |
| GATGGATGTTACCTCGCATG+TGG | + | chr6_1:4145059-4145078 | Msa0869860:intron | 50.0% | |
| GGACAATGGTCCAATTTGCC+GGG | - | chr6_1:4146092-4146111 | None:intergenic | 50.0% | |
| !! | AGCACTGACACAAACACGTC+TGG | + | chr6_1:4147270-4147289 | Msa0869860:intron | 50.0% |
| CACGTTGGAAGCCTGAAACA+GGG | + | chr6_1:4147990-4148009 | Msa0869860:CDS | 50.0% | |
| CTCCTGGATCATCAGTGCTT+TGG | - | chr6_1:4148360-4148379 | None:intergenic | 50.0% | |
| GTCTTCTTGATCCTCACTCC+TGG | - | chr6_1:4148376-4148395 | None:intergenic | 50.0% | |
| ! | TCTTGTGTTGTTGTCTGCCG+TGG | - | chr6_1:4148688-4148707 | None:intergenic | 50.0% |
| GATGCCTTTGGTACGCTTCA+AGG | + | chr6_1:4148819-4148838 | Msa0869860:CDS | 50.0% | |
| !! | ACGCTTCAAGGGTATTCCCA+TGG | + | chr6_1:4148831-4148850 | Msa0869860:CDS | 50.0% |
| AAGGCCCTCTCATACACAGA+AGG | - | chr6_1:4149095-4149114 | None:intergenic | 50.0% | |
| ! | GGTTGGGTGGCTGAGAATTT+TGG | - | chr6_1:4150029-4150048 | None:intergenic | 50.0% |
| ! | GTTGGTAGGTTGGATTGGGT+TGG | - | chr6_1:4150101-4150120 | None:intergenic | 50.0% |
| !! | AGGGGAAACTTGCTACTGCT+AGG | - | chr6_1:4150137-4150156 | None:intergenic | 50.0% |
| TGGATACACCGCCAAACTCA+AGG | - | chr6_1:4150488-4150507 | None:intergenic | 50.0% | |
| TGAGTTTGGCGGTGTATCCA+TGG | + | chr6_1:4150488-4150507 | Msa0869860:CDS | 50.0% | |
| GAGTTTGGCGGTGTATCCAT+GGG | + | chr6_1:4150489-4150508 | Msa0869860:CDS | 50.0% | |
| AGTTTGGCGGTGTATCCATG+GGG | + | chr6_1:4150490-4150509 | Msa0869860:CDS | 50.0% | |
| GTATCCATGGGGGTTGAGTA+TGG | + | chr6_1:4150501-4150520 | Msa0869860:CDS | 50.0% | |
| ATCACCATACTCAACCCCCA+TGG | - | chr6_1:4150508-4150527 | None:intergenic | 50.0% | |
| ! | TAGCTCTATGGGTTTCGCCA+AGG | + | chr6_1:4150676-4150695 | Msa0869860:intron | 50.0% |
| TATGGGTTTCGCCAAGGACT+GGG | + | chr6_1:4150682-4150701 | Msa0869860:CDS | 50.0% | |
| ! | TTGTTTGGTGACCCAGTCCT+TGG | - | chr6_1:4150696-4150715 | None:intergenic | 50.0% |
| GAGTAAAGCCCGATACTCAG+CGG | - | chr6_1:4150725-4150744 | None:intergenic | 50.0% | |
| TGCAACAGATTCTGGATCCC+TGG | + | chr6_1:4151161-4151180 | Msa0869860:intron | 50.0% | |
| TCCGCATCCAACACATTTCC+AGG | + | chr6_1:4151254-4151273 | Msa0869860:CDS | 50.0% | |
| CCCTGGAAATGTGTTGGATG+CGG | - | chr6_1:4151258-4151277 | None:intergenic | 50.0% | |
| CCGCATCCAACACATTTCCA+GGG | + | chr6_1:4151255-4151274 | Msa0869860:CDS | 50.0% | |
| AACCGGGCCATCAATCTCAA+TGG | + | chr6_1:4151742-4151761 | Msa0869860:CDS | 50.0% | |
| GCGGGCTTCTCACAATCATT+TGG | - | chr6_1:4152891-4152910 | None:intergenic | 50.0% | |
| CTATACAATCTCGCGTCCAG+AGG | + | chr6_1:4152973-4152992 | Msa0869860:three_prime_UTR | 50.0% | |
| GATATGATCCGTGCGTCGCA+CGG | + | chr6_1:4145244-4145263 | Msa0869860:intron | 55.0% | |
| ATATGATCCGTGCGTCGCAC+GGG | + | chr6_1:4145245-4145264 | Msa0869860:intron | 55.0% | |
| TGGGAAAGTCAAGGCTGCCT+TGG | + | chr6_1:4147197-4147216 | Msa0869860:intron | 55.0% | |
| GCACGTTGGAAGCCTGAAAC+AGG | + | chr6_1:4147989-4148008 | Msa0869860:CDS | 55.0% | |
| !! | CAGGGCTAGTCTCGTGAGAA+TGG | - | chr6_1:4148279-4148298 | None:intergenic | 55.0% |
| ! | TCACGAGACTAGCCCTGCAA+AGG | + | chr6_1:4148282-4148301 | Msa0869860:CDS | 55.0% |
| ! | CACGAGACTAGCCCTGCAAA+GGG | + | chr6_1:4148283-4148302 | Msa0869860:CDS | 55.0% |
| ! | GCACTGATGATCCAGGAGTG+AGG | + | chr6_1:4148362-4148381 | Msa0869860:CDS | 55.0% |
| CAAACCAATTTGCACCGCCC+AGG | - | chr6_1:4149316-4149335 | None:intergenic | 55.0% | |
| CTGGGCGGTGCAAATTGGTT+TGG | + | chr6_1:4149314-4149333 | Msa0869860:intron | 55.0% | |
| !! | GGTATTGCGTTTGGGTTGGG+TGG | - | chr6_1:4150042-4150061 | None:intergenic | 55.0% |
| GTTTGGCGGTGTATCCATGG+GGG | + | chr6_1:4150491-4150510 | Msa0869860:CDS | 55.0% | |
| AGTAAAGCTCCTGCACCTGC+TGG | - | chr6_1:4150549-4150568 | None:intergenic | 55.0% | |
| ! | GCTTGCTGAAGATGGGAGTC+TGG | + | chr6_1:4150569-4150588 | Msa0869860:CDS | 55.0% |
| CTATGGGTTTCGCCAAGGAC+TGG | + | chr6_1:4150681-4150700 | Msa0869860:CDS | 55.0% | |
| CGCGTCCAGAGGCTCATATA+AGG | + | chr6_1:4152984-4153003 | Msa0869860:three_prime_UTR | 55.0% | |
| TGCACCTGGGCGGTGCAAAT+TGG | + | chr6_1:4149309-4149328 | Msa0869860:intron | 60.0% | |
| AATCGTGGACCAGCAGGTGC+AGG | + | chr6_1:4150537-4150556 | Msa0869860:CDS | 60.0% | |
| GATCCGTGCGTCGCACGGGT+CGG | + | chr6_1:4145249-4145268 | Msa0869860:intron | 70.0% | |
| TCGCCGACCCGTGCGACGCA+CGG | - | chr6_1:4145255-4145274 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 4144779 | 4153056 | 4144779 | ID=Msa0869860;Name=Msa0869860 |
| chr6_1 | mRNA | 4144779 | 4153056 | 4144779 | ID=Msa0869860-mRNA-1;Parent=Msa0869860;Name=Msa0869860-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.63|0.58|0.91|0.45|0.33|12|667|452 |
| chr6_1 | exon | 4144779 | 4144784 | 4144779 | ID=Msa0869860-mRNA-1:exon:1266;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4147740 | 4147806 | 4147740 | ID=Msa0869860-mRNA-1:exon:1267;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4147825 | 4148056 | 4147825 | ID=Msa0869860-mRNA-1:exon:1268;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4148081 | 4148248 | 4148081 | ID=Msa0869860-mRNA-1:exon:1269;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4148264 | 4148502 | 4148264 | ID=Msa0869860-mRNA-1:exon:1270;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4148694 | 4148887 | 4148694 | ID=Msa0869860-mRNA-1:exon:1271;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4150474 | 4150590 | 4150474 | ID=Msa0869860-mRNA-1:exon:1272;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4150679 | 4150822 | 4150679 | ID=Msa0869860-mRNA-1:exon:1273;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4151169 | 4151276 | 4151169 | ID=Msa0869860-mRNA-1:exon:1274;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4151712 | 4151763 | 4151712 | ID=Msa0869860-mRNA-1:exon:1275;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4152336 | 4152920 | 4152336 | ID=Msa0869860-mRNA-1:exon:1276;Parent=Msa0869860-mRNA-1 |
| chr6_1 | exon | 4152943 | 4153056 | 4152943 | ID=Msa0869860-mRNA-1:exon:1277;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4144779 | 4144784 | 4144779 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4147740 | 4147806 | 4147740 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4147825 | 4148056 | 4147825 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4148081 | 4148248 | 4148081 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4148264 | 4148502 | 4148264 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4148694 | 4148887 | 4148694 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4150474 | 4150590 | 4150474 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4150679 | 4150822 | 4150679 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4151169 | 4151276 | 4151169 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4151712 | 4151763 | 4151712 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | CDS | 4152336 | 4152367 | 4152336 | ID=Msa0869860-mRNA-1:cds;Parent=Msa0869860-mRNA-1 |
| chr6_1 | three_prime_UTR | 4152368 | 4152920 | 4152368 | ID=Msa0869860-mRNA-1:three_prime_utr;Parent=Msa0869860-mRNA-1 |
| chr6_1 | three_prime_UTR | 4152943 | 4153056 | 4152943 | ID=Msa0869860-mRNA-1:three_prime_utr;Parent=Msa0869860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
